Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0004200

Physical Location & Seq

Genomic Coordinates Reverse (-)

13960426 .. 13966911

Gene Structure 6486 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G157000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3045 bp

ATGGAGAACGGTCCTAAGGAACGAAGCGAAGTAGAAGCTAAAGTGCTTGACAAGGTCGGAGAAGTAATCTCAGTCGTAAAGAAGGCCAAGCACGTAAACCAAGTGATTTGCGCGCTTCACTCCCTCGCTATTCTTCTCTTCCCTCTCGACGCCTCTCTTCTCTCAGGTGCTATTGATGAGCGATGCAGAGAGCTGGTACTTGGTGCCAAGGCTCCTTCGGCTGATGAGAGGAGCGAGTGGTGGCAAGTATTCTATGGAGGAGCTGCATTCTCGACATTTGCTCGGGTTCTGTTAATTGATATTGCTTCCGACTGGCTAGCTTGCTTCCCCTTTTCAGCACGTCAACATGTCTATGATGTTTTCTTTGTTAATGGACTTGCCGCTGAGGTTGTTCAGACCTTGGTCCCTTGTCTACATCAGAGTGGAAGAGACGATCTTGATGTTAAGGCTGTACACTCTAATACTGAAAGGTTACTCATACTTTGCTTGCTTGAAAATAACGGGGTGCTCCAGATGGCTAGAGAATTCAGCAGTTCTTCCCATTCTGAAGATTATATAAATGAAAATCTTAAGCCAGCTGTATCTAGAGTAGCCCAGATCGTTGCATCTATACCTGACAAAGCACAATTGAGAGCCCCAACTTCGCTGTCATCACATTTTTTCTTCAAGCAAGTTACCATCCAACTTCTTTCTCTAGCAGAAGAAAGGAATATGAATCTATTAGAAGAAGGAGCGTGCCTTAAAAGTGACATGAATGGGACCTTACTATTTGTTGGGGAGATATTTTCTCGTGTATGTCGGCGTGGATCTGTAGATGTGCTTTTAAGCGAAATAATTCCACGGGTTCTTAGTCATGTACGGAGCTTATTATCATTAAATATAGATCCACTTGTCTCGGATGTTTTTGAATCATACCCTAGTTCCCAATTTTGGTTGAATATGATACAAGCTATGAAAGATTCTTATGCTGTGGAAAGAATATCTGAGCAGCTTTTACATCAGCTTGCAACTGAACGTTTGAGTGATGTTGAAGCCTACTGGATTCTTTGGCTATTATTTCATCGGGTTTCTAAATACCAGATATCAGTGAGGGCAATGTTTGCTGACAAATTCTTACTCTGGAAAGTATTTCCTGTTCGTTGCCTGCGATGGATCCTTCAGTTTGCTGTTCTTGAATGCCCACCTGAAAGTAATTCACTTGCTAAAGGTCATAATACCCGAAATTTCTTAGACACATTGCAGCATCTGGTAGCAGTATGGTCTAATAAGGAGTTTGTGCAATCAGCCCCAACTGAGCAGCAAATTTATGTATCTGCAGCTGTAGGCCTTTCCCTGGAGAAGATGTCTAAGGAGGAACTAGATGAGACTAAGGATGTGATGCACTCAATTCTCAAAGGAGTGAGCTGTAGGCTGGAAAGCCCTAATAATTTGATTCGGAAAATGGCCAGCAGTGTTGCTTTAGCTTTCTCCAAGGTGATTGACCCAAAAAATCCTCTATACCTTGACGATAGCTACACTGGGGATACTATCGACTGGGAATTTGGGTTGTCTACTCCTGAGAAAGGGACTCCTGAACAGGGTATTGACAAAACTGAAATATCTACTACCTCAGTTCTAGAAAAGGGCTTCACCCACAAAGGCAATGATGAGATAGCAAGCAATGGGAAGAGTAAAAATAAAAAAATAACTGAATCTAAGTTGGTTGATCCAGACGAGATCATTGATCCAGTTACACTAAATTACGAATCAGCCTCTGATGAAGATGACAACGATGATGCTAGTGAGAATTCCGATGTCTCGAGTGACTCATCTTTACAGCCATATGATTTGGCAGATGATGACACAGATTTGAAAAGAAAATTTTCACAGTTGGTTGATGTGGTTGGGGCACTTCGGAAATCTGATGATGCTGATGGGGTGGAGAATGCTCTTGCTGTTGCTGAAAAGCTTGTCAGAGCGTCGCCTGATGAGCTTAAGCATGTAGCAAGTGATCTTGTCAGAACTCTAGTTCAGGTTCGTTGCTCTGACTTGGCTGTAGAAGGTGAGGAAGATTCAGCTGAAGACAAGAGACAGAGAGCATTGGTTGCTTTGCTTGTCACATGTCCTTTGGAGTCTCTTGGGACTTTAAACAAACTACTATATTCACCTAATGTGGATGTCAGTCAACGCATAATGATACTTGATGTCATGACTGAGGCTGCTCAGGAGCTTGCTCATACTAAAATTATAAAGCCTCAACAGGCTAGGGCCCTCATAGCAACCACGTCAGAGACCCAAGCTTGGTTCTTGCCAAGCGACATAGGGCCCCCTGGATCTGGTCCCTGGAAAGAGATTTCAGAATCAAGATCTTTACTGAATTGGACGAATCGTTATGAGAGGGAACTTCCTTCAAAACCTGGTCAGATTAAGAGAGGCAAAACGCGGCAATGGAGCCTAAGATCAGCAAATAAACAAGAAGCCCAATTAGAATGGTCCCATAATAAGTTTCCGGTGAATGCAGCAGCATTTATGCTCCCTGCCATGCAGGGCTTTGATAAGAAAAGGCAGGGTGTTGACTTGCTTGATAGAGATTTTATCGTCCTGGGAAAACTCATCTATATGCTTGGTGTTTGTATGAAATGTGCAGCCATGCATCCAGAAGCCTCTGCACTGGCTGCCCCTCTTCTAGATATGCTAAAATCCAGGGAGGTATGTCTTCACAAGGAAGCTTATGTTAGAAAAGCTGTTCTTTTTGCAGCTTCATGCGTATTGCTATCTCTTCATCCCTCTTATGTAGCAACCTCCTTAGTTGAAGGAAACGTCGAAATTTCAAACGGGCTTGAATGGGTGCGCACATGGGCGCTTCAGGTAGCTGAATCAGACAACGATAGAGAGTGCTATACGATGGCTATGGCATGCCTACAACTCCATGCTGAGATGGCCCTCCAAGCTTCTCGAGCACTAGATTCACCAGAAGCTACATCCATTTCGAAGAATGTCGGCCTTCCTTCCAGTCTGTCCAAAGGGACAATTATAATCCCACAATCCAGTGTGAAATACCAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03460 ko04150 map03460 map04150

Pfam Domains

Protein Families

Telomere_reg-2

Protein Analysis

1015

Amino Acids

112.72

Weight (kDa)

5.29

Isoelectric Point (pI)

43.77

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004200)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48470 AT3G48470
fragaria_vesca	FvH4_5g07361 FvH4_5g07460 FvH4_5g07490 FvH4_5g07490 FvH4_5g07490 FvH4_5g07490
malus_domestica	MD06G1154000.v1.1 MD14G1163600.v1.1
prunus_persica	Prupe.5G157000_v2.0.a1
pyrus_communis	pycom14g13630
rosa_chinensis	RchiOBHm_Chr7g0191161
rosa_laevigata	RLG00000004472
rosa_multiflora	Rmu_co8075350.1_g000001 Rmu_sc0000701.1_g000017 Rmu_sc0001585.1_g000002 Rmu_sc0016007.1_g000006 Rmu_sc0039738.1_g000001
rosa_roxburghii	Rroxscaffold_3G00263990
rosa_rugosa	Rorug06G0509300
rosa_samantha	Rh1AG145200 Rh1AG325800 Rh1CG136700 Rh1CG136800 Rh1DG151800 Rh5CG463100 Rh7AG116500 Rh7BG118700 Rh7CG121400 Rh7DG119700
rosa_wichuraiana	Rw1G028870 Rw7G010100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	2228, 3014
Acc16I	TGCGCA	1 cut(s)	2831
AccB1I	GGYRCC	1 cut(s)	203
AccI	GTMKAC	2 cut(s)	412, 1550
AccII	CGCG	2 cut(s)	113, 2422
AciI	CCGC	2 cut(s)	381, 2422
AclI	AACGTT	1 cut(s)	1015
AclWI	GGATC	7 cut(s)	814, 878, 1147, 1160, 1700, 1718, 2320
AcoI	YGGCCR	1 cut(s)	1443
AcsI	RAATTY	8 cut(s)	524, 1109, 1222, 1302, 1538, 1786, 1859, 2805
AcuI	CTGAAG	4 cut(s)	567, 1142, 2079, 2828
AcyI	GRCGYC	1 cut(s)	150
AfaI	GTAC	3 cut(s)	198, 453, 858
AfiI	CCNNNNNNNGG	6 cut(s)	930, 1333, 1562, 1577, 2280, 2315
AflII	CTTAAG	2 cut(s)	569, 1973
AflIII	ACRYGT	2 cut(s)	346, 2099
AjiI	CACGTC	2 cut(s)	341, 2265
AjnI	CCWGG	6 cut(s)	1332, 2308, 2321, 2395, 2580, 2681
Alw21I	GWGCWC	2 cut(s)	510, 2941
Alw26I	GTCTC	7 cut(s)	423, 898, 1358, 1801, 2062, 2118, 2264
AlwI	GGATC	7 cut(s)	814, 878, 1147, 1160, 1700, 1718, 2320
AlwNI	CAGNNNCTG	2 cut(s)	1246, 1754
Ama87I	CYCGRG	3 cut(s)	282, 1798, 2934
AoxI	GGCC	7 cut(s)	84, 1324, 1443, 2247, 2303, 2919, 2980
ApaI	GGGCCC	2 cut(s)	2251, 2307
ApoI	RAATTY	8 cut(s)	524, 1109, 1222, 1302, 1538, 1786, 1859, 2805
ArsI	GACNNNNNNTTYG	2 cut(s)	1523, 1555
Asp700I	GAANNNNTTC	2 cut(s)	834, 1861
AspLEI	GCGC	4 cut(s)	113, 115, 2832, 2842
AsuHPI	GGTGA	6 cut(s)	1486, 1621, 2054, 2136, 2503, 2940
AsuII	TTCGAA	1 cut(s)	2969
AsuNHI	GCTAGC	1 cut(s)	316
AvaI	CYCGRG	3 cut(s)	282, 1798, 2934
AvaII	GGWCC	5 cut(s)	11, 403, 759, 2318, 2472
AxyI	CCTNAGG	1 cut(s)	15
BaeGI	GKGCMC	3 cut(s)	1891, 2251, 2307
BalI	TGGCCA	1 cut(s)	1445
BamHI	GGATCC	1 cut(s)	1152
BanI	GGYRCC	1 cut(s)	203
BanII	GRGCYC	3 cut(s)	637, 2251, 2307
BauI	CACGAG	1 cut(s)	789
BbsI	GAAGAC	2 cut(s)	2067, 2687
Bbv12I	GWGCWC	2 cut(s)	510, 2941
BbvCI	CCTCAGC	1 cut(s)	384
BccI	CCATC	6 cut(s)	508, 686, 1143, 1907, 2878, 2911
BciT130I	CCWGG	6 cut(s)	1334, 2310, 2323, 2397, 2582, 2683
BciVI	GTATCC	1 cut(s)	1516
BcoDI	GTCTC	7 cut(s)	423, 898, 1358, 1801, 2062, 2118, 2264
BfmI	CTRYAG	5 cut(s)	810, 1314, 1320, 1405, 2034
BfoI	RGCGCY	1 cut(s)	2843
BfrI	CTTAAG	2 cut(s)	569, 1973
BfuI	GTATCC	1 cut(s)	1516
BglII	AGATCT	1 cut(s)	2345
Bme1390I	CCNGG	6 cut(s)	1334, 2310, 2323, 2397, 2582, 2683
Bme18I	GGWCC	5 cut(s)	11, 403, 759, 2318, 2472
BmeT110I	CYCGRG	3 cut(s)	282, 1798, 2934
BmgBI	CACGTC	2 cut(s)	341, 2265
BmrFI	CCNGG	6 cut(s)	1334, 2310, 2323, 2397, 2582, 2683
BmrI	ACTGGG	2 cut(s)	1527, 1543
BmsI	GCATC	7 cut(s)	173, 614, 1252, 1368, 1765, 1897, 2641
BmtI	GCTAGC	1 cut(s)	320
BmuI	ACTGGG	2 cut(s)	1527, 1543
BoxI	GACNNNNGTC	1 cut(s)	401
BpiI	GAAGAC	2 cut(s)	2067, 2687
BpmI	CTGGAG	2 cut(s)	494, 1355
Bpu10I	CCTNAGC	2 cut(s)	384, 2202
Bpu14I	TTCGAA	1 cut(s)	2969
BsaAI	YACGTR	1 cut(s)	94
BsaHI	GRCGYC	1 cut(s)	150
BsaI	GGTCTC	1 cut(s)	2264
BsaJI	CCNNGG	9 cut(s)	207, 399, 839, 1332, 1470, 2308, 2321, 2581, 2682
BsaWI	WCCGGW	1 cut(s)	2488
BsaXI	ACNNNNNCTCC	2 cut(s)	1328, 1358
Bsc4I	CCNNNNNNNGG	6 cut(s)	930, 1333, 1562, 1577, 2280, 2315
Bse1I	ACTGG	8 cut(s)	317, 1043, 1522, 1538, 1727, 2655, 2991, 3027
Bse21I	CCTNAGG	1 cut(s)	15
Bse3DI	GCAATG	5 cut(s)	1101, 1235, 1648, 1666, 2432
BseBI	CCWGG	6 cut(s)	1334, 2310, 2323, 2397, 2582, 2683
BseDI	CCNNGG	9 cut(s)	207, 399, 839, 1332, 1470, 2308, 2321, 2581, 2682
BseGI	GGATG	7 cut(s)	678, 904, 1378, 2161, 2632, 2761, 2960
BseLI	CCNNNNNNNGG	6 cut(s)	930, 1333, 1562, 1577, 2280, 2315
BseMI	GCAATG	5 cut(s)	1101, 1235, 1648, 1666, 2432
BseNI	ACTGG	8 cut(s)	317, 1043, 1522, 1538, 1727, 2655, 2991, 3027
BsePI	GCGCGC	1 cut(s)	111
BseRI	GAGGAG	2 cut(s)	244, 273
BseSI	GKGCMC	3 cut(s)	1891, 2251, 2307
BsgI	GTGCAG	2 cut(s)	2631, 2643
Bsh1236I	CGCG	2 cut(s)	113, 2422
BshFI	GGCC	7 cut(s)	86, 1326, 1445, 2249, 2305, 2921, 2982
BshNI	GGYRCC	1 cut(s)	203
BsiHKAI	GWGCWC	2 cut(s)	510, 2941
BsiHKCI	CYCGRG	3 cut(s)	282, 1798, 2934
BsiSI	CCGG	1 cut(s)	2489
BslFI	GGGAC	7 cut(s)	389, 772, 1579, 2134, 2304, 2458, 3019
BslI	CCNNNNNNNGG	6 cut(s)	930, 1333, 1562, 1577, 2280, 2315
BsmAI	GTCTC	7 cut(s)	423, 898, 1358, 1801, 2062, 2118, 2264
BsmBI	CGTCTC	1 cut(s)	423
BsmFI	GGGAC	7 cut(s)	389, 772, 1579, 2134, 2304, 2458, 3019
BsmI	GAATGC	4 cut(s)	266, 1181, 1930, 2500
BsnI	GGCC	7 cut(s)	86, 1326, 1445, 2249, 2305, 2921, 2982
Bso31I	GGTCTC	1 cut(s)	2264
BsoBI	CYCGRG	3 cut(s)	282, 1798, 2934
Bsp119I	TTCGAA	1 cut(s)	2969
Bsp120I	GGGCCC	2 cut(s)	2247, 2303
Bsp1286I	GDGCHC	6 cut(s)	510, 637, 1891, 2251, 2307, 2941
Bsp1407I	TGTACA	1 cut(s)	451
BspACI	CCGC	2 cut(s)	381, 2422
BspANI	GGCC	7 cut(s)	86, 1326, 1445, 2249, 2305, 2921, 2982
BspFNI	CGCG	2 cut(s)	113, 2422
BspHI	TCATGA	1 cut(s)	2187
BspMAI	CTGCAG	1 cut(s)	1318
BspOI	GCTAGC	1 cut(s)	320
BspPI	GGATC	7 cut(s)	814, 878, 1147, 1160, 1700, 1718, 2320
BspT104I	TTCGAA	1 cut(s)	2969
BspT107I	GGYRCC	1 cut(s)	203
BspTI	CTTAAG	2 cut(s)	569, 1973
BspTNI	GGTCTC	1 cut(s)	2264
BsrDI	GCAATG	5 cut(s)	1101, 1235, 1648, 1666, 2432
BsrGI	TGTACA	1 cut(s)	451
BsrI	ACTGG	8 cut(s)	317, 1043, 1522, 1538, 1727, 2655, 2991, 3027
BssECI	CCNNGG	9 cut(s)	207, 399, 839, 1332, 1470, 2308, 2321, 2581, 2682
BssHII	GCGCGC	1 cut(s)	111
BssNI	GRCGYC	1 cut(s)	150
BssSI	CACGAG	1 cut(s)	789
BssT1I	CCWWGG	3 cut(s)	207, 399, 1470
Bst2BI	CACGAG	1 cut(s)	789
Bst2UI	CCWGG	6 cut(s)	1334, 2310, 2323, 2397, 2582, 2683
Bst4CI	ACNGT	2 cut(s)	11, 1869
Bst6I	CTCTTC	6 cut(s)	143, 162, 421, 1661, 2667, 2763
BstACI	GRCGYC	1 cut(s)	150
BstAFI	CTTAAG	2 cut(s)	569, 1973
BstAPI	GCANNNNNTGC	3 cut(s)	1100, 2084, 2654
BstAUI	TGTACA	1 cut(s)	451
BstBAI	YACGTR	1 cut(s)	94
BstBI	TTCGAA	1 cut(s)	2969
BstDSI	CCRYGG	1 cut(s)	839
BstENI	CCTNNNNNAGG	1 cut(s)	1560
BstF5I	GGATG	7 cut(s)	678, 904, 1378, 2161, 2632, 2761, 2960
BstFNI	CGCG	2 cut(s)	113, 2422
BstH2I	RGCGCY	1 cut(s)	2843
BstHHI	GCGC	4 cut(s)	113, 115, 2832, 2842
BstMAI	GTCTC	7 cut(s)	423, 898, 1358, 1801, 2062, 2118, 2264
BstMWI	GCNNNNNNNGC	9 cut(s)	218, 1100, 1969, 2084, 2255, 2654, 2918, 2927, 2936
BstNI	CCWGG	6 cut(s)	1334, 2310, 2323, 2397, 2582, 2683
BstNSI	RCATGY	4 cut(s)	350, 1982, 2103, 2898
BstPAI	GACNNNNGTC	1 cut(s)	401
BstSCI	CCNGG	6 cut(s)	1332, 2308, 2321, 2395, 2580, 2681
BstSFI	CTRYAG	5 cut(s)	810, 1314, 1320, 1405, 2034
BstSLI	GKGCMC	3 cut(s)	1891, 2251, 2307
BstUI	CGCG	2 cut(s)	113, 2422
BstV2I	GAAGAC	2 cut(s)	2067, 2687
BstX2I	RGATCY	5 cut(s)	806, 883, 1152, 2312, 2345
BstYI	RGATCY	5 cut(s)	806, 883, 1152, 2312, 2345
Bsu36I	CCTNAGG	1 cut(s)	15
BsuI	GTATCC	1 cut(s)	1516
BsuRI	GGCC	7 cut(s)	86, 1326, 1445, 2249, 2305, 2921, 2982
BtgI	CCRYGG	1 cut(s)	839
BtgZI	GCGATG	2 cut(s)	196, 1162
BtrI	CACGTC	2 cut(s)	341, 2265
BtsCI	GGATG	7 cut(s)	678, 904, 1378, 2161, 2632, 2761, 2960
BtsI	GCAGTG	1 cut(s)	1456
BtsIMutI	CAGTG	5 cut(s)	1092, 1456, 1515, 2648, 3034
CaiI	CAGNNNCTG	2 cut(s)	1246, 1754
CciI	TCATGA	1 cut(s)	2187
CfoI	GCGC	4 cut(s)	113, 115, 2832, 2842
CseI	GACGC	2 cut(s)	158, 1947
CsiI	ACCWGGT	1 cut(s)	2395
Csp6I	GTAC	3 cut(s)	197, 452, 857
CviQI	GTAC	3 cut(s)	197, 452, 857
DraI	TTTAAA	1 cut(s)	2127
EaeI	YGGCCR	1 cut(s)	1443
Eam1104I	CTCTTC	6 cut(s)	143, 162, 421, 1661, 2667, 2763
EarI	CTCTTC	6 cut(s)	143, 162, 421, 1661, 2667, 2763
Eco130I	CCWWGG	3 cut(s)	207, 399, 1470
Eco147I	AGGCCT	1 cut(s)	1326
Eco24I	GRGCYC	3 cut(s)	637, 2251, 2307
Eco31I	GGTCTC	1 cut(s)	2264
Eco32I	GATATC	1 cut(s)	1083
Eco47I	GGWCC	5 cut(s)	11, 403, 759, 2318, 2472
Eco57I	CTGAAG	4 cut(s)	567, 1142, 2079, 2828
Eco81I	CCTNAGG	1 cut(s)	15
Eco88I	CYCGRG	3 cut(s)	282, 1798, 2934
EcoNI	CCTNNNNNAGG	1 cut(s)	1560
EcoO109I	RGGNCCY	5 cut(s)	759, 2247, 2248, 2303, 2304
EcoRI	GAATTC	2 cut(s)	524, 1786
EcoRII	CCWGG	6 cut(s)	1332, 2308, 2321, 2395, 2580, 2681
EcoRV	GATATC	1 cut(s)	1083
EcoT14I	CCWWGG	3 cut(s)	207, 399, 1470
EcoT22I	ATGCAT	1 cut(s)	2634
EcoT38I	GRGCYC	3 cut(s)	637, 2251, 2307
ErhI	CCWWGG	3 cut(s)	207, 399, 1470
Esp3I	CGTCTC	1 cut(s)	423
FalI	AAGNNNNNCTT	2 cut(s)	2712, 2744
FaqI	GGGAC	7 cut(s)	389, 772, 1579, 2134, 2304, 2458, 3019
FauNDI	CATATG	1 cut(s)	1822
FblI	GTMKAC	2 cut(s)	412, 1550
FokI	GGATG	7 cut(s)	665, 911, 1385, 2168, 2619, 2748, 2947
FriOI	GRGCYC	3 cut(s)	637, 2251, 2307
FspAI	RTGCGCAY	1 cut(s)	2831
FspI	TGCGCA	1 cut(s)	2831
GlaI	GCGC	4 cut(s)	112, 114, 2831, 2841
GsuI	CTGGAG	2 cut(s)	494, 1355
HaeII	RGCGCY	1 cut(s)	2843
HaeIII	GGCC	7 cut(s)	86, 1326, 1445, 2249, 2305, 2921, 2982
HapII	CCGG	1 cut(s)	2489
HgaI	GACGC	2 cut(s)	158, 1947
HhaI	GCGC	4 cut(s)	113, 115, 2832, 2842
Hin1I	GRCGYC	1 cut(s)	150
Hin6I	GCGC	4 cut(s)	111, 113, 2830, 2840
HinP1I	GCGC	4 cut(s)	111, 113, 2830, 2840
HincII	GTYRAC	3 cut(s)	344, 2165, 2554
HindII	GTYRAC	3 cut(s)	344, 2165, 2554
HindIII	AAGCTT	4 cut(s)	1946, 2277, 2706, 2928
HpaII	CCGG	1 cut(s)	2489
HphI	GGTGA	6 cut(s)	1486, 1621, 2054, 2136, 2503, 2940
Hpy166II	GTNNAC	7 cut(s)	97, 344, 413, 454, 1551, 2165, 2554
Hpy8I	GTNNAC	7 cut(s)	97, 344, 413, 454, 1551, 2165, 2554
Hpy99I	CGWCG	3 cut(s)	152, 1963, 2804
HpyAV	CCTTC	9 cut(s)	76, 225, 722, 1166, 2033, 2397, 2786, 2993, 2997
HpyCH4III	ACNGT	2 cut(s)	11, 1869
HpyCH4IV	ACGT	5 cut(s)	93, 340, 1015, 2264, 2799
HpyF10VI	GCNNNNNNNGC	9 cut(s)	218, 1100, 1969, 2084, 2255, 2654, 2918, 2927, 2936
HpySE526I	ACGT	5 cut(s)	93, 340, 1015, 2264, 2799
Hsp92I	GRCGYC	1 cut(s)	150
HspAI	GCGC	4 cut(s)	111, 113, 2830, 2840
LmnI	GCTCC	9 cut(s)	217, 231, 260, 513, 731, 861, 2206, 2430, 2517
LweI	GCATC	7 cut(s)	173, 614, 1252, 1368, 1765, 1897, 2641
MabI	ACCWGGT	1 cut(s)	2395
MaeII	ACGT	5 cut(s)	93, 340, 1015, 2264, 2799
MaeIII	GTNAC	6 cut(s)	471, 673, 746, 1729, 1802, 2095
MfeI	CAATTG	1 cut(s)	626
MflI	RGATCY	5 cut(s)	806, 883, 1152, 2312, 2345
MhlI	GDGCHC	6 cut(s)	510, 637, 1891, 2251, 2307, 2941
MlsI	TGGCCA	1 cut(s)	1445
MluNI	TGGCCA	1 cut(s)	1445
MlyI	GAGTC	3 cut(s)	1561, 1799, 2120
MmeI	TCCRAC	3 cut(s)	37, 333, 706
Mox20I	TGGCCA	1 cut(s)	1445
Mph1103I	ATGCAT	1 cut(s)	2634
MroXI	GAANNNNTTC	2 cut(s)	834, 1861
MscI	TGGCCA	1 cut(s)	1445
MslI	CAYNNNNRTG	3 cut(s)	351, 420, 2597
Msp20I	TGGCCA	1 cut(s)	1445
MspA1I	CMGCKG	4 cut(s)	383, 578, 1319, 2057
MspCI	CTTAAG	2 cut(s)	569, 1973
MspI	CCGG	1 cut(s)	2489
MspR9I	CCNGG	6 cut(s)	1334, 2310, 2323, 2397, 2582, 2683
MunI	CAATTG	1 cut(s)	626
Mva1269I	GAATGC	4 cut(s)	266, 1181, 1930, 2500
MvaI	CCWGG	6 cut(s)	1334, 2310, 2323, 2397, 2582, 2683
MvnI	CGCG	2 cut(s)	113, 2422
MwoI	GCNNNNNNNGC	9 cut(s)	218, 1100, 1969, 2084, 2255, 2654, 2918, 2927, 2936
NdeI	CATATG	1 cut(s)	1822
NheI	GCTAGC	1 cut(s)	316
NmuCI	GTSAC	3 cut(s)	746, 1802, 2095
NsbI	TGCGCA	1 cut(s)	2831
NsiI	ATGCAT	1 cut(s)	2634
NspI	RCATGY	4 cut(s)	350, 1982, 2103, 2898
NspV	TTCGAA	1 cut(s)	2969
PaeI	GCATGC	1 cut(s)	2898
PaeR7I	CTCGAG	2 cut(s)	1798, 2934
PagI	TCATGA	1 cut(s)	2187
PauI	GCGCGC	1 cut(s)	111
PceI	AGGCCT	1 cut(s)	1326
PciI	ACATGT	2 cut(s)	346, 2099
PcsI	WCGNNNNNNNCGW	1 cut(s)	1144
PctI	GAATGC	4 cut(s)	266, 1181, 1930, 2500
PdmI	GAANNNNTTC	2 cut(s)	834, 1861
PflFI	GACNNNGTC	1 cut(s)	53
PleI	GAGTC	3 cut(s)	1561, 1799, 2119
PpsI	GAGTC	3 cut(s)	1561, 1799, 2119
Ppu21I	YACGTR	1 cut(s)	94
PpuMI	RGGWCCY	1 cut(s)	759
PscI	ACATGT	2 cut(s)	346, 2099
PshAI	GACNNNNGTC	1 cut(s)	401
PsiI	TTATAA	2 cut(s)	2228, 3014
Psp1406I	AACGTT	1 cut(s)	1015
Psp5II	RGGWCCY	1 cut(s)	759
Psp6I	CCWGG	6 cut(s)	1332, 2308, 2321, 2395, 2580, 2681
PspGI	CCWGG	6 cut(s)	1332, 2308, 2321, 2395, 2580, 2681
PspOMI	GGGCCC	2 cut(s)	2247, 2303
PspPPI	RGGWCCY	1 cut(s)	759
PsrI	GAACNNNNNNTAC	2 cut(s)	1119, 1151
PstI	CTGCAG	1 cut(s)	1318
PstNI	CAGNNNCTG	2 cut(s)	1246, 1754
PsuI	RGATCY	5 cut(s)	806, 883, 1152, 2312, 2345
PsyI	GACNNNGTC	1 cut(s)	53
PteI	GCGCGC	1 cut(s)	111
PvuII	CAGCTG	3 cut(s)	578, 1319, 2057
RsaI	GTAC	3 cut(s)	198, 453, 858
RsaNI	GTAC	3 cut(s)	197, 452, 857
RseI	CAYNNNNRTG	3 cut(s)	351, 420, 2597
SchI	GAGTC	3 cut(s)	1561, 1799, 2120
ScrFI	CCNGG	6 cut(s)	1334, 2310, 2323, 2397, 2582, 2683
SduI	GDGCHC	6 cut(s)	510, 637, 1891, 2251, 2307, 2941
SexAI	ACCWGGT	1 cut(s)	2395
SfaNI	GCATC	7 cut(s)	173, 614, 1252, 1368, 1765, 1897, 2641
SfcI	CTRYAG	5 cut(s)	810, 1314, 1320, 1405, 2034
Sfr274I	CTCGAG	2 cut(s)	1798, 2934
SfuI	TTCGAA	1 cut(s)	2969
SinI	GGWCC	5 cut(s)	11, 403, 759, 2318, 2472
SlaI	CTCGAG	2 cut(s)	1798, 2934
SmiMI	CAYNNNNRTG	3 cut(s)	351, 420, 2597
SmlI	CTYRAG	4 cut(s)	569, 1798, 1973, 2934
SmoI	CTYRAG	4 cut(s)	569, 1798, 1973, 2934
SphI	GCATGC	1 cut(s)	2898
SseBI	AGGCCT	1 cut(s)	1326
SsiI	CCGC	2 cut(s)	381, 2422
StuI	AGGCCT	1 cut(s)	1326
StyD4I	CCNGG	6 cut(s)	1332, 2308, 2321, 2395, 2580, 2681
StyI	CCWWGG	3 cut(s)	207, 399, 1470
TaaI	ACNGT	2 cut(s)	11, 1869
TaiI	ACGT	5 cut(s)	96, 343, 1018, 2267, 2802
TaqI	TCGA	7 cut(s)	147, 272, 1530, 1799, 2802, 2935, 2969
TatI	WGTACW	1 cut(s)	451
TauI	GCSGC	2 cut(s)	383, 2425
TscAI	CASTG	5 cut(s)	1092, 1456, 1522, 2655, 3034
TseFI	GTSAC	3 cut(s)	746, 1802, 2095
Tsp45I	GTSAC	3 cut(s)	746, 1802, 2095
TspDTI	ATGAA	9 cut(s)	576, 728, 767, 968, 1049, 1773, 2630, 2730, 2750
TspGWI	ACGGA	1 cut(s)	874
TspRI	CASTG	5 cut(s)	1092, 1456, 1522, 2655, 3034
Tth111I	GACNNNGTC	1 cut(s)	53
Vha464I	CTTAAG	2 cut(s)	569, 1973
VpaK11BI	GGWCC	5 cut(s)	11, 403, 759, 2318, 2472
XagI	CCTNNNNNAGG	1 cut(s)	1560
XapI	RAATTY	8 cut(s)	524, 1109, 1222, 1302, 1538, 1786, 1859, 2805
XbaI	TCTAGA	3 cut(s)	584, 1615, 2665
XceI	RCATGY	4 cut(s)	350, 1982, 2103, 2898
XhoI	CTCGAG	2 cut(s)	1798, 2934
XmiI	GTMKAC	2 cut(s)	412, 1550
XmnI	GAANNNNTTC	2 cut(s)	834, 1861
Zsp2I	ATGCAT	1 cut(s)	2634

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.