MD06G1154000.v1.1

Telomere length regulation protein TEL2 homolog

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
Physical Location & Seq
Reverse (-)
29734387 .. 29735048
662 bp
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UTR
Exon/CDS
Intron
MD06G1154000.v1.1.491

Sequence Viewer

Length: 189 bp
ATGATTTTTTGGAAGTTGAATGATGTGAAATTTGGAACTTCAAGTGCTATTGACGAGCAATACAGAGAGCAGCTACTTAGTTCCGAGGCTCCTTCGGCAGATGAGAGGAGAGAGTGGTGGCACGCATTCTATGGAGGAGCCGCATTTTCGTCATCTGCTCGGTTTCCGTTAATTGGTATTTTTTTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

63

Amino Acids

7.17

Weight (kDa)

5.12

Isoelectric Point (pI)

46.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 141
AcsI RAATTY 1 cut(s) 29
AfiI CCNNNNNNNGG 1 cut(s) 173
AgsI TTSAA 2 cut(s) 19, 42
AluBI AGCT 1 cut(s) 73
AluI AGCT 1 cut(s) 73
ApeKI GCWGC 1 cut(s) 70
ApoI RAATTY 1 cut(s) 29
BbvI GCAGC 1 cut(s) 82
BisI GCNGC 2 cut(s) 71, 141
BlsI GCNGC 2 cut(s) 72, 142
BmiI GGNNCC 2 cut(s) 90, 139
BsaJI CCNNGG 1 cut(s) 84
Bsc4I CCNNNNNNNGG 1 cut(s) 173
BseDI CCNNGG 1 cut(s) 84
BseLI CCNNNNNNNGG 1 cut(s) 173
BseRI GAGGAG 2 cut(s) 121, 150
BseXI GCAGC 1 cut(s) 82
BslI CCNNNNNNNGG 1 cut(s) 173
BsmI GAATGC 1 cut(s) 125
BspACI CCGC 1 cut(s) 141
BspLI GGNNCC 2 cut(s) 90, 139
BssECI CCNNGG 1 cut(s) 84
BstC8I GCNNGC 1 cut(s) 123
BstDEI CTNAG 1 cut(s) 77
BstMWI GCNNNNNNNGC 1 cut(s) 95
BstV1I GCAGC 1 cut(s) 82
Cac8I GCNNGC 1 cut(s) 123
CviJI RGCY 3 cut(s) 73, 89, 140
CviKI_1 RGCY 3 cut(s) 73, 89, 140
DdeI CTNAG 1 cut(s) 77
FaiI YATR 1 cut(s) 132
Fnu4HI GCNGC 2 cut(s) 71, 141
Fsp4HI GCNGC 2 cut(s) 71, 141
GluI GCNGC 2 cut(s) 71, 141
Hpy188I TCNGA 1 cut(s) 85
HpyAV CCTTC 1 cut(s) 102
HpyF10VI GCNNNNNNNGC 1 cut(s) 95
HpyF3I CTNAG 1 cut(s) 77
LmnI GCTCC 2 cut(s) 94, 137
Lsp1109I GCAGC 1 cut(s) 82
MluCI AATT 2 cut(s) 29, 171
MnlI CCTC 3 cut(s) 79, 99, 128
MseI TTAA 1 cut(s) 170
Mva1269I GAATGC 1 cut(s) 125
MwoI GCNNNNNNNGC 1 cut(s) 95
NlaIV GGNNCC 2 cut(s) 90, 139
PctI GAATGC 1 cut(s) 125
PkrI GCNGC 2 cut(s) 72, 142
PspN4I GGNNCC 2 cut(s) 90, 139
SaqAI TTAA 1 cut(s) 170
SatI GCNGC 2 cut(s) 71, 141
SetI ASST 1 cut(s) 75
SgeI CNNG 5 cut(s) 54, 67, 97, 134, 171
Sse9I AATT 2 cut(s) 29, 171
SsiI CCGC 1 cut(s) 141
TasI AATT 2 cut(s) 29, 171
TauI GCSGC 1 cut(s) 143
Tru1I TTAA 1 cut(s) 170
Tru9I TTAA 1 cut(s) 170
TseI GCWGC 1 cut(s) 70
TspGWI ACGGA 1 cut(s) 156
XapI RAATTY 1 cut(s) 29
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.