Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0039738.1

Orthogroup ID

OG0004200

Physical Location & Seq

Genomic Coordinates Reverse (-)

1534 .. 5448

Gene Structure 3915 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0039738.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2328 bp

atggagatattagatggcttccatgaaagtaacatgaatgggaccttactgtttgttggggaaacattttctcgtatatgtcgacgtggatctgtagatgtgcttttaagtgaaataatcccaaggattcttagacatgtccggagtttgtcatcatcaactatggactcactaggttcagatgttctggaatcagaccctggttcccaattttggttgaatcttattcaagcaatcaaagattcatatgctgtggaaagaatgtctgagcaacttttacatcagcttgcaactgaacaagtgggtgatattgaagcttactggattctttggctattatttcatcgggttttcaagagccaaatatcagcgaggtccatgtttactgacaagtttttagtctggaaagtatttcctatttgttgccttcgatggatccttcaattttccgtccttgaatgcgcaccagattctaattcacttgctaaaggtcataatacccgcaatttcttagacacgttacagcatctggtagcagtatggtctaaaagggagtttgtacaatcagccccagtcgagcagcaaatatatgtaactgctggtgtaggcctttccctagagcagatgtctaaggaggaattagatgagacaaaggatgtgctgcattcaattctccaaggagtgagctgtaggcttgaaagccctaatcatttagtacggaagatggctagctctgttgctttagttttctccaaggtgattgatccaaaaaatcctctataccttgatgacagcctaactggggagactattgactgggaatttgggttgtctactcctaagaaaggtaccttgggaacctcaagttgcttagaagaaggtattaacaaatccaaaatatctaaaacctcagtgctggaagatggcttaaaccacaaagccagtgggaagagtaaaagtaggaaattatctgaaacaaagttggttgatccagacgagatcattgatcctgttacactgaattatgattcagtctctgatgaagatgacaacaatgatagtgaggattctgatgtctcaagtgactcatctttacagccatatgatttatcagatgatgacacagatttgaaaaggaaattttcacagttggttgatgtagttggggcacttcggaaatctgatgatgctgatggggtggagaaggctcttgaagtttctgaaaaacttgtgcgagcatcacctgatgagcttaagtttgtagcaagtgatctcgtgagaaccctggtacaggttcgttgctctgacttggctatagaaggtgaggaagattcagctgaagacaagagacaaagaacattggtcgctttgcttgtcacgtgtccattggagtctcttgaaactttaaacaaactactatattcacctaatgtggatgtcagtcagcgcttactgattcttgatgtaatgaccgagggggctgaggagcttgctgatactaaaattataaaggctaaacatcagactagggccctcatatcgaccacatcagagacacaagcttggttcttgcctagtgaaataggtcctcctggagctgacgcctggaaagagatttcagaaacaaattctttactgaactggacaaatcgttatcagagggaacttcccccaaagcctggtcagattaggagaggaaagacacgtcaatggagccttagatcagccaatgcaccaaaaagccaaatagaatggtcccataataagtttccagtgtatgcagcagcatttatgcttcctgccatgcaggggtttgataagagaaggcaaggtgtcgaccttcttgatagagattttatcgtcctgggaaaactcatctatatgctcggagtctgtatgaaatgtgcagccatgcatccggaagcatctgctctggctggccctcttctagatatgctaagctccagggagatatgttttcacaaggaagcatatgtcagaagatctaccctttttgcagcttcatgcgtattgctatcacttcacccctcttatgtagcaacctccttagttgaaggcaatactgaaatttctaacggacttgaatggattcgcacatgggcccttcatgtaactgaatcagacacagatagagagtgttattcgatggctatgaaatgtctgcaactccatgctgaaatggccctgcaagcttctcgagcactagagtcggcacaaagcacgtccaatgcaaagaatgttgttgggattccgtccaatctatccaagggaacaattatcatcccccactccaatgtgaaatactga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03460 ko04150 map03460 map04150

Pfam Domains

Protein Families

Telomere_reg-2

Protein Analysis

775

Amino Acids

86.5

Weight (kDa)

5.29

Isoelectric Point (pI)

49.21

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004200)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48470 AT3G48470
fragaria_vesca	FvH4_5g07361 FvH4_5g07460 FvH4_5g07490 FvH4_5g07490 FvH4_5g07490 FvH4_5g07490
malus_domestica	MD06G1154000.v1.1 MD14G1163600.v1.1
prunus_persica	Prupe.5G157000_v2.0.a1
pyrus_communis	pycom14g13630
rosa_chinensis	RchiOBHm_Chr7g0191161
rosa_laevigata	RLG00000004472
rosa_multiflora	Rmu_co8075350.1_g000001 Rmu_sc0000701.1_g000017 Rmu_sc0001585.1_g000002 Rmu_sc0016007.1_g000006 Rmu_sc0039738.1_g000001
rosa_roxburghii	Rroxscaffold_3G00263990
rosa_rugosa	Rorug06G0509300
rosa_samantha	Rh1AG145200 Rh1AG325800 Rh1CG136700 Rh1CG136800 Rh1DG151800 Rh5CG463100 Rh7AG116500 Rh7BG118700 Rh7CG121400 Rh7DG119700
rosa_wichuraiana	Rw1G028870 Rw7G010100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1508
Acc16I	TGCGCA	1 cut(s)	463
Acc65I	GGTACC	1 cut(s)	848
AccB1I	GGYRCC	1 cut(s)	848
AccB7I	CCANNNNNTGG	1 cut(s)	1679
AccI	GTMKAC	3 cut(s)	82, 833, 1836
AccIII	TCCGGA	2 cut(s)	141, 1918
AciI	CCGC	1 cut(s)	502
AclWI	GGATC	6 cut(s)	97, 430, 443, 758, 983, 1001
AcsI	RAATTY	4 cut(s)	821, 1139, 1627, 2088
AcuI	CTGAAG	1 cut(s)	1359
AcvI	CACGTG	1 cut(s)	1380
AcyI	GRCGYC	1 cut(s)	1602
AfaI	GTAC	4 cut(s)	561, 717, 850, 1290
AfeI	AGCGCT	1 cut(s)	1448
AfiI	CCNNNNNNNGG	6 cut(s)	213, 802, 845, 1291, 1679, 1809
AflII	CTTAAG	1 cut(s)	1253
AflIII	ACRYGT	4 cut(s)	136, 516, 1379, 1703
AjiI	CACGTC	3 cut(s)	86, 1706, 2244
AjnI	CCWGG	7 cut(s)	199, 1284, 1591, 1604, 1678, 1863, 1964
AjuI	GAANNNNNNNTTGG	2 cut(s)	836, 868
Alw21I	GWGCWC	1 cut(s)	2224
Alw26I	GTCTC	7 cut(s)	641, 800, 1039, 1081, 1342, 1398, 1547
AlwI	GGATC	6 cut(s)	97, 430, 443, 758, 983, 1001
AlwNI	CAGNNNCTG	3 cut(s)	200, 529, 1037
Ama87I	CYCGRG	1 cut(s)	2217
Aor13HI	TCCGGA	2 cut(s)	141, 1918
Aor51HI	AGCGCT	1 cut(s)	1448
AoxI	GGCC	5 cut(s)	607, 1530, 1939, 2121, 2202
ApaI	GGGCCC	2 cut(s)	1534, 2125
ApeKI	GCWGC	6 cut(s)	580, 661, 1781, 1784, 1907, 2018
ApoI	RAATTY	4 cut(s)	821, 1139, 1627, 2088
ArsI	GACNNNNNNTTYG	2 cut(s)	806, 838
Asp700I	GAANNNNTTC	1 cut(s)	2109
Asp718I	GGTACC	1 cut(s)	848
AspLEI	GCGC	2 cut(s)	464, 1449
AsuHPI	GGTGA	6 cut(s)	317, 769, 1233, 1334, 1416, 2036
AsuNHI	GCTAGC	1 cut(s)	728
AvaI	CYCGRG	1 cut(s)	2217
AvaII	GGWCC	4 cut(s)	42, 375, 1586, 1755
BaeGI	GKGCMC	3 cut(s)	1171, 1534, 2125
BamHI	GGATCC	1 cut(s)	435
BanI	GGYRCC	1 cut(s)	848
BanII	GRGCYC	2 cut(s)	1534, 2125
BauI	CACGAG	1 cut(s)	1274
BbrPI	CACGTG	1 cut(s)	1380
BbsI	GAAGAC	1 cut(s)	1347
Bbv12I	GWGCWC	1 cut(s)	2224
BbvCI	CCTCAGC	1 cut(s)	1482
BbvI	GCAGC	6 cut(s)	592, 648, 1793, 1796, 1919, 2030
BccI	CCATC	6 cut(s)	8, 426, 718, 917, 1187, 2161
BcgI	CGANNNNNNTGC	4 cut(s)	2198, 2211, 2232, 2245
BciT130I	CCWGG	7 cut(s)	201, 1286, 1593, 1606, 1680, 1865, 1966
BcoDI	GTCTC	7 cut(s)	641, 800, 1039, 1081, 1342, 1398, 1547
BfaI	CTAG	7 cut(s)	173, 617, 729, 1527, 1575, 1949, 2225
BfmI	CTRYAG	3 cut(s)	93, 688, 1314
BfoI	RGCGCY	1 cut(s)	1450
BfrI	CTTAAG	1 cut(s)	1253
BglII	AGATCT	1 cut(s)	2003
BisI	GCNGC	6 cut(s)	581, 662, 1782, 1785, 1908, 2019
BlpI	GCTNAGC	1 cut(s)	1958
BlsI	GCNGC	6 cut(s)	582, 663, 1783, 1786, 1909, 2020
Bme1390I	CCNGG	7 cut(s)	201, 1286, 1593, 1606, 1680, 1865, 1966
Bme18I	GGWCC	4 cut(s)	42, 375, 1586, 1755
BmeT110I	CYCGRG	1 cut(s)	2217
BmgBI	CACGTC	3 cut(s)	86, 1706, 2244
BmiI	GGNNCC	9 cut(s)	43, 205, 437, 850, 859, 1532, 1715, 1757, 2123
BmrFI	CCNGG	7 cut(s)	201, 1286, 1593, 1606, 1680, 1865, 1966
BmrI	ACTGGG	3 cut(s)	566, 810, 826
BmsI	GCATC	5 cut(s)	535, 1177, 1247, 1924, 1934
BmtI	GCTAGC	1 cut(s)	732
BmuI	ACTGGG	3 cut(s)	566, 810, 826
BpiI	GAAGAC	1 cut(s)	1347
BpmI	CTGGAG	2 cut(s)	1614, 1948
Bpu10I	CCTNAGC	1 cut(s)	1482
Bpu1102I	GCTNAGC	1 cut(s)	1958
BpuEI	CTTGAG	2 cut(s)	847, 1063
BsaAI	YACGTR	1 cut(s)	1380
BsaHI	GRCGYC	1 cut(s)	1602
BsaWI	WCCGGW	2 cut(s)	141, 1918
Bsc4I	CCNNNNNNNGG	6 cut(s)	213, 802, 845, 1291, 1679, 1809
Bse1I	ACTGG	7 cut(s)	326, 572, 805, 821, 942, 1646, 1772
BseAI	TCCGGA	2 cut(s)	141, 1918
BseBI	CCWGG	7 cut(s)	201, 1286, 1593, 1606, 1680, 1865, 1966
BseGI	GGATG	4 cut(s)	661, 1441, 1915, 2301
BseLI	CCNNNNNNNGG	6 cut(s)	213, 802, 845, 1291, 1679, 1809
BseMII	CTCAG	3 cut(s)	258, 924, 1473
BseNI	ACTGG	7 cut(s)	326, 572, 805, 821, 942, 1646, 1772
BseRI	GAGGAG	1 cut(s)	1499
BseSI	GKGCMC	3 cut(s)	1171, 1534, 2125
BseXI	GCAGC	6 cut(s)	592, 648, 1793, 1796, 1919, 2030
BsgI	GTGCAG	1 cut(s)	1926
BshFI	GGCC	5 cut(s)	609, 1532, 1941, 2123, 2204
BshNI	GGYRCC	1 cut(s)	848
BsiHKAI	GWGCWC	1 cut(s)	2224
BsiHKCI	CYCGRG	1 cut(s)	2217
BsiSI	CCGG	2 cut(s)	142, 1919
BslFI	GGGAC	2 cut(s)	55, 1741
BslI	CCNNNNNNNGG	6 cut(s)	213, 802, 845, 1291, 1679, 1809
BsmAI	GTCTC	7 cut(s)	641, 800, 1039, 1081, 1342, 1398, 1547
BsmFI	GGGAC	2 cut(s)	55, 1741
BsmI	GAATGC	2 cut(s)	464, 664
BsnI	GGCC	5 cut(s)	609, 1532, 1941, 2123, 2204
BsoBI	CYCGRG	1 cut(s)	2217
Bsp120I	GGGCCC	2 cut(s)	1530, 2121
Bsp1286I	GDGCHC	4 cut(s)	1171, 1534, 2125, 2224
Bsp13I	TCCGGA	2 cut(s)	141, 1918
Bsp1407I	TGTACA	1 cut(s)	559
Bsp143I	GATC	9 cut(s)	89, 435, 763, 988, 999, 1006, 1270, 1721, 2003
Bsp1720I	GCTNAGC	1 cut(s)	1958
BspACI	CCGC	1 cut(s)	502
BspANI	GGCC	5 cut(s)	609, 1532, 1941, 2123, 2204
BspCNI	CTCAG	3 cut(s)	259, 923, 1474
BspEI	TCCGGA	2 cut(s)	141, 1918
BspLI	GGNNCC	9 cut(s)	43, 205, 437, 850, 859, 1532, 1715, 1757, 2123
BspOI	GCTAGC	1 cut(s)	732
BspPI	GGATC	6 cut(s)	97, 430, 443, 758, 983, 1001
BspT107I	GGYRCC	1 cut(s)	848
BspTI	CTTAAG	1 cut(s)	1253
BsrGI	TGTACA	1 cut(s)	559
BsrI	ACTGG	7 cut(s)	326, 572, 805, 821, 942, 1646, 1772
BssMI	GATC	9 cut(s)	89, 435, 763, 988, 999, 1006, 1270, 1721, 2003
BssNI	GRCGYC	1 cut(s)	1602
BssSI	CACGAG	1 cut(s)	1274
BssT1I	CCWWGG	5 cut(s)	122, 676, 753, 852, 2286
Bst2BI	CACGAG	1 cut(s)	1274
Bst2UI	CCWGG	7 cut(s)	201, 1286, 1593, 1606, 1680, 1865, 1966
Bst4CI	ACNGT	2 cut(s)	51, 1149
Bst6I	CTCTTC	2 cut(s)	944, 1950
BstACI	GRCGYC	1 cut(s)	1602
BstAFI	CTTAAG	1 cut(s)	1253
BstAUI	TGTACA	1 cut(s)	559
BstBAI	YACGTR	1 cut(s)	1380
BstC8I	GCNNGC	6 cut(s)	288, 730, 1236, 1491, 1939, 2211
BstENI	CCTNNNNNAGG	2 cut(s)	843, 1289
BstF5I	GGATG	4 cut(s)	661, 1441, 1915, 2301
BstH2I	RGCGCY	1 cut(s)	1450
BstHHI	GCGC	2 cut(s)	464, 1449
BstKTI	GATC	9 cut(s)	92, 438, 766, 991, 1002, 1009, 1273, 1724, 2006
BstMAI	GTCTC	7 cut(s)	641, 800, 1039, 1081, 1342, 1398, 1547
BstMBI	GATC	9 cut(s)	89, 435, 763, 988, 999, 1006, 1270, 1721, 2003
BstMWI	GCNNNNNNNGC	3 cut(s)	2201, 2210, 2219
BstNI	CCWGG	7 cut(s)	201, 1286, 1593, 1606, 1680, 1865, 1966
BstNSI	RCATGY	1 cut(s)	140
BstSCI	CCNGG	7 cut(s)	199, 1284, 1591, 1604, 1678, 1863, 1964
BstSFI	CTRYAG	3 cut(s)	93, 688, 1314
BstSLI	GKGCMC	3 cut(s)	1171, 1534, 2125
BstV1I	GCAGC	6 cut(s)	592, 648, 1793, 1796, 1919, 2030
BstV2I	GAAGAC	1 cut(s)	1347
BstX2I	RGATCY	3 cut(s)	89, 435, 2003
BstYI	RGATCY	3 cut(s)	89, 435, 2003
BsuRI	GGCC	5 cut(s)	609, 1532, 1941, 2123, 2204
BtrI	CACGTC	3 cut(s)	86, 1706, 2244
BtsCI	GGATG	4 cut(s)	661, 1441, 1915, 2301
BtsIMutI	CAGTG	4 cut(s)	918, 949, 1016, 1779
Cac8I	GCNNGC	6 cut(s)	288, 730, 1236, 1491, 1939, 2211
CaiI	CAGNNNCTG	3 cut(s)	200, 529, 1037
CfoI	GCGC	2 cut(s)	464, 1449
CseI	GACGC	1 cut(s)	1610
Csp6I	GTAC	4 cut(s)	560, 716, 849, 1289
CspCI	CAANNNNNGTGG	2 cut(s)	925, 960
CviQI	GTAC	4 cut(s)	560, 716, 849, 1289
DpnI	GATC	9 cut(s)	91, 437, 765, 990, 1001, 1008, 1272, 1723, 2005
DpnII	GATC	9 cut(s)	89, 435, 763, 988, 999, 1006, 1270, 1721, 2003
DraI	TTTAAA	1 cut(s)	1407
Eam1104I	CTCTTC	2 cut(s)	944, 1950
EarI	CTCTTC	2 cut(s)	944, 1950
Eco130I	CCWWGG	5 cut(s)	122, 676, 753, 852, 2286
Eco147I	AGGCCT	1 cut(s)	609
Eco24I	GRGCYC	2 cut(s)	1534, 2125
Eco47I	GGWCC	4 cut(s)	42, 375, 1586, 1755
Eco47III	AGCGCT	1 cut(s)	1448
Eco57I	CTGAAG	1 cut(s)	1359
Eco72I	CACGTG	1 cut(s)	1380
Eco88I	CYCGRG	1 cut(s)	2217
EcoNI	CCTNNNNNAGG	2 cut(s)	843, 1289
EcoO109I	RGGNCCY	5 cut(s)	42, 1530, 1531, 1586, 2122
EcoRII	CCWGG	7 cut(s)	199, 1284, 1591, 1604, 1678, 1863, 1964
EcoT14I	CCWWGG	5 cut(s)	122, 676, 753, 852, 2286
EcoT22I	ATGCAT	1 cut(s)	1917
EcoT38I	GRGCYC	2 cut(s)	1534, 2125
ErhI	CCWWGG	5 cut(s)	122, 676, 753, 852, 2286
FaqI	GGGAC	2 cut(s)	55, 1741
FauI	CCCGC	1 cut(s)	509
FauNDI	CATATG	3 cut(s)	247, 1102, 1993
FblI	GTMKAC	3 cut(s)	82, 833, 1836
Fnu4HI	GCNGC	6 cut(s)	581, 662, 1782, 1785, 1908, 2019
FokI	GGATG	4 cut(s)	668, 1448, 1902, 2288
FriOI	GRGCYC	2 cut(s)	1534, 2125
Fsp4HI	GCNGC	6 cut(s)	581, 662, 1782, 1785, 1908, 2019
FspAI	RTGCGCAY	1 cut(s)	463
FspBI	CTAG	7 cut(s)	173, 617, 729, 1527, 1575, 1949, 2225
FspI	TGCGCA	1 cut(s)	463
GlaI	GCGC	2 cut(s)	463, 1448
GluI	GCNGC	6 cut(s)	581, 662, 1782, 1785, 1908, 2019
GsuI	CTGGAG	2 cut(s)	1614, 1948
HaeII	RGCGCY	1 cut(s)	1450
HaeIII	GGCC	5 cut(s)	609, 1532, 1941, 2123, 2204
HapII	CCGG	2 cut(s)	142, 1919
HgaI	GACGC	1 cut(s)	1610
HhaI	GCGC	2 cut(s)	464, 1449
Hin1I	GRCGYC	1 cut(s)	1602
Hin6I	GCGC	2 cut(s)	462, 1447
HinP1I	GCGC	2 cut(s)	462, 1447
HincII	GTYRAC	2 cut(s)	83, 1837
HindII	GTYRAC	2 cut(s)	83, 1837
HindIII	AAGCTT	3 cut(s)	315, 1560, 2211
HpaII	CCGG	2 cut(s)	142, 1919
HphI	GGTGA	6 cut(s)	317, 769, 1233, 1334, 1416, 2036
Hpy166II	GTNNAC	4 cut(s)	83, 384, 834, 1837
Hpy8I	GTNNAC	4 cut(s)	83, 384, 834, 1837
Hpy99I	CGWCG	1 cut(s)	87
HpyAV	CCTTC	9 cut(s)	437, 449, 872, 1198, 1313, 1818, 1850, 2069, 2135
HpyCH4III	ACNGT	2 cut(s)	51, 1149
HpyCH4IV	ACGT	5 cut(s)	85, 518, 1379, 1705, 2243
HpyF10VI	GCNNNNNNNGC	3 cut(s)	2201, 2210, 2219
HpySE526I	ACGT	5 cut(s)	85, 518, 1379, 1705, 2243
Hsp92I	GRCGYC	1 cut(s)	1602
HspAI	GCGC	2 cut(s)	462, 1447
Kpn2I	TCCGGA	2 cut(s)	141, 1918
KpnI	GGTACC	1 cut(s)	852
Kzo9I	GATC	9 cut(s)	89, 435, 763, 988, 999, 1006, 1270, 1721, 2003
LmnI	GCTCC	4 cut(s)	1486, 1595, 1713, 1967
Lsp1109I	GCAGC	6 cut(s)	592, 648, 1793, 1796, 1919, 2030
LweI	GCATC	5 cut(s)	535, 1177, 1247, 1924, 1934
MaeI	CTAG	7 cut(s)	173, 617, 729, 1527, 1575, 1949, 2225
MaeII	ACGT	5 cut(s)	85, 518, 1379, 1705, 2243
MaeIII	GTNAC	7 cut(s)	29, 519, 592, 1012, 1082, 1375, 2131
MalI	GATC	9 cut(s)	91, 437, 765, 990, 1001, 1008, 1272, 1723, 2005
MboI	GATC	9 cut(s)	89, 435, 763, 988, 999, 1006, 1270, 1721, 2003
MboII	GAAGA	9 cut(s)	733, 887, 932, 961, 1055, 1340, 1352, 1937, 2013
MflI	RGATCY	3 cut(s)	89, 435, 2003
MhlI	GDGCHC	4 cut(s)	1171, 1534, 2125, 2224
MlyI	GAGTC	5 cut(s)	161, 1079, 1400, 1899, 2237
Mph1103I	ATGCAT	1 cut(s)	1917
MroI	TCCGGA	2 cut(s)	141, 1918
MroXI	GAANNNNTTC	1 cut(s)	2109
MseI	TTAA	5 cut(s)	107, 885, 929, 1254, 1406
MslI	CAYNNNNRTG	3 cut(s)	1708, 1880, 2313
MspA1I	CMGCKG	1 cut(s)	1337
MspCI	CTTAAG	1 cut(s)	1253
MspI	CCGG	2 cut(s)	142, 1919
MspR9I	CCNGG	7 cut(s)	201, 1286, 1593, 1606, 1680, 1865, 1966
Mva1269I	GAATGC	2 cut(s)	464, 664
MvaI	CCWGG	7 cut(s)	201, 1286, 1593, 1606, 1680, 1865, 1966
MwoI	GCNNNNNNNGC	3 cut(s)	2201, 2210, 2219
NdeI	CATATG	3 cut(s)	247, 1102, 1993
NdeII	GATC	9 cut(s)	89, 435, 763, 988, 999, 1006, 1270, 1721, 2003
NheI	GCTAGC	1 cut(s)	728
NlaIV	GGNNCC	9 cut(s)	43, 205, 437, 850, 859, 1532, 1715, 1757, 2123
NmuCI	GTSAC	2 cut(s)	1082, 1375
NsbI	TGCGCA	1 cut(s)	463
NsiI	ATGCAT	1 cut(s)	1917
NspI	RCATGY	1 cut(s)	140
PaeR7I	CTCGAG	1 cut(s)	2217
PceI	AGGCCT	1 cut(s)	609
PciI	ACATGT	1 cut(s)	136
PcsI	WCGNNNNNNNCGW	1 cut(s)	79
PctI	GAATGC	2 cut(s)	464, 664
PdmI	GAANNNNTTC	1 cut(s)	2109
PflMI	CCANNNNNTGG	1 cut(s)	1679
PfoI	TCCNGGA	1 cut(s)	1591
PkrI	GCNGC	6 cut(s)	582, 663, 1783, 1786, 1909, 2020
PleI	GAGTC	5 cut(s)	161, 1079, 1399, 1898, 2236
PmaCI	CACGTG	1 cut(s)	1380
PmlI	CACGTG	1 cut(s)	1380
PpsI	GAGTC	5 cut(s)	161, 1079, 1399, 1898, 2236
Ppu21I	YACGTR	1 cut(s)	1380
PpuMI	RGGWCCY	2 cut(s)	42, 1586
PscI	ACATGT	1 cut(s)	136
PsiI	TTATAA	1 cut(s)	1508
Psp5II	RGGWCCY	2 cut(s)	42, 1586
Psp6I	CCWGG	7 cut(s)	199, 1284, 1591, 1604, 1678, 1863, 1964
PspCI	CACGTG	1 cut(s)	1380
PspGI	CCWGG	7 cut(s)	199, 1284, 1591, 1604, 1678, 1863, 1964
PspN4I	GGNNCC	9 cut(s)	43, 205, 437, 850, 859, 1532, 1715, 1757, 2123
PspOMI	GGGCCC	2 cut(s)	1530, 2121
PspPPI	RGGWCCY	2 cut(s)	42, 1586
PstNI	CAGNNNCTG	3 cut(s)	200, 529, 1037
PsuI	RGATCY	3 cut(s)	89, 435, 2003
PvuII	CAGCTG	1 cut(s)	1337
RsaI	GTAC	4 cut(s)	561, 717, 850, 1290
RsaNI	GTAC	4 cut(s)	560, 716, 849, 1289
RseI	CAYNNNNRTG	3 cut(s)	1708, 1880, 2313
SalI	GTCGAC	2 cut(s)	81, 1835
SaqAI	TTAA	5 cut(s)	107, 885, 929, 1254, 1406
SatI	GCNGC	6 cut(s)	581, 662, 1782, 1785, 1908, 2019
Sau3AI	GATC	9 cut(s)	89, 435, 763, 988, 999, 1006, 1270, 1721, 2003
SchI	GAGTC	5 cut(s)	161, 1079, 1400, 1899, 2237
ScrFI	CCNGG	7 cut(s)	201, 1286, 1593, 1606, 1680, 1865, 1966
SduI	GDGCHC	4 cut(s)	1171, 1534, 2125, 2224
SfaNI	GCATC	5 cut(s)	535, 1177, 1247, 1924, 1934
SfcI	CTRYAG	3 cut(s)	93, 688, 1314
Sfr274I	CTCGAG	1 cut(s)	2217
SinI	GGWCC	4 cut(s)	42, 375, 1586, 1755
SlaI	CTCGAG	1 cut(s)	2217
SmiMI	CAYNNNNRTG	3 cut(s)	1708, 1880, 2313
SmlI	CTYRAG	4 cut(s)	862, 1078, 1253, 2217
SmoI	CTYRAG	4 cut(s)	862, 1078, 1253, 2217
SseBI	AGGCCT	1 cut(s)	609
SsiI	CCGC	1 cut(s)	502
SspMI	CTAG	7 cut(s)	173, 617, 729, 1527, 1575, 1949, 2225
StuI	AGGCCT	1 cut(s)	609
StyD4I	CCNGG	7 cut(s)	199, 1284, 1591, 1604, 1678, 1863, 1964
StyI	CCWWGG	5 cut(s)	122, 676, 753, 852, 2286
TaaI	ACNGT	2 cut(s)	51, 1149
TaiI	ACGT	5 cut(s)	88, 521, 1382, 1708, 2246
TaqI	TCGA	7 cut(s)	82, 430, 576, 1541, 1836, 2165, 2218
TaqII	GACCGA	1 cut(s)	1487
TatI	WGTACW	1 cut(s)	559
Tru1I	TTAA	5 cut(s)	107, 885, 929, 1254, 1406
Tru9I	TTAA	5 cut(s)	107, 885, 929, 1254, 1406
TscAI	CASTG	4 cut(s)	918, 949, 1023, 1779
TseFI	GTSAC	2 cut(s)	1082, 1375
TseI	GCWGC	6 cut(s)	580, 661, 1781, 1784, 1907, 2018
Tsp45I	GTSAC	2 cut(s)	1082, 1375
TspDTI	ATGAA	9 cut(s)	39, 50, 234, 332, 1056, 1913, 2013, 2117, 2189
TspGWI	ACGGA	4 cut(s)	439, 733, 2112, 2262
TspRI	CASTG	4 cut(s)	918, 949, 1023, 1779
Van91I	CCANNNNNTGG	1 cut(s)	1679
Vha464I	CTTAAG	1 cut(s)	1253
VpaK11BI	GGWCC	4 cut(s)	42, 375, 1586, 1755
XagI	CCTNNNNNAGG	2 cut(s)	843, 1289
XapI	RAATTY	4 cut(s)	821, 1139, 1627, 2088
XbaI	TCTAGA	1 cut(s)	1948
XceI	RCATGY	1 cut(s)	140
XcmI	CCANNNNNNNNNTGG	1 cut(s)	941
XhoI	CTCGAG	1 cut(s)	2217
XmiI	GTMKAC	3 cut(s)	82, 833, 1836
XmnI	GAANNNNTTC	1 cut(s)	2109
XspI	CTAG	7 cut(s)	173, 617, 729, 1527, 1575, 1949, 2225
Zsp2I	ATGCAT	1 cut(s)	1917

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.