Rh1CG136800

Telomere length regulation protein TEL2 homolog

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
Physical Location & Seq
Reverse (-)
30002749 .. 30003086
338 bp
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UTR
Exon/CDS
Intron
Rh1CG136800.1

Sequence Viewer

Length: 213 bp
ATGGAGAACGGCTCCAAAAGACGAAGCGAAGTAGAAATCAAAGTTCTTGACAAGGTCGGAGAAGTGATCTCCGAATTACACAAGGCCAAGCACGCAGACCAAGTCATTTCCGCGCTGCACTCCCTCGCTATTCTTCTCTTCCCTCTCGATTCTTCTCTCTTCTCAGGTGCTATTGGTGAGCGGTGCAGAGAGCAGGTACGACGCGTCGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

70

Amino Acids

7.8

Weight (kDa)

7.97

Isoelectric Point (pI)

47.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 184
AccBSI CCGCTC 1 cut(s) 181
AccII CGCG 2 cut(s) 113, 204
AciI CCGC 2 cut(s) 111, 181
AfaI GTAC 1 cut(s) 198
AflIII ACRYGT 1 cut(s) 202
AoxI GGCC 1 cut(s) 84
ApeKI GCWGC 1 cut(s) 115
AspLEI GCGC 1 cut(s) 115
AsuHPI GGTGA 1 cut(s) 188
BbvI GCAGC 1 cut(s) 102
BceAI ACGGC 1 cut(s) 25
BfuAI ACCTGC 1 cut(s) 184
BisI GCNGC 1 cut(s) 116
BlsI GCNGC 1 cut(s) 117
BmiI GGNNCC 1 cut(s) 13
BplI GAGNNNNNCTC 1 cut(s) 28
BseMII CTCAG 1 cut(s) 177
BseXI GCAGC 1 cut(s) 102
BsgI GTGCAG 2 cut(s) 101, 205
Bsh1236I CGCG 2 cut(s) 113, 204
BshFI GGCC 1 cut(s) 86
BsnI GGCC 1 cut(s) 86
Bsp143I GATC 1 cut(s) 66
BspACI CCGC 2 cut(s) 111, 181
BspANI GGCC 1 cut(s) 86
BspCNI CTCAG 1 cut(s) 176
BspFNI CGCG 2 cut(s) 113, 204
BspLI GGNNCC 1 cut(s) 13
BspMI ACCTGC 1 cut(s) 184
BsrBI CCGCTC 1 cut(s) 181
BssMI GATC 1 cut(s) 66
Bst6I CTCTTC 2 cut(s) 143, 164
BstC8I GCNNGC 1 cut(s) 93
BstDEI CTNAG 1 cut(s) 163
BstFNI CGCG 2 cut(s) 113, 204
BstHHI GCGC 1 cut(s) 115
BstKTI GATC 1 cut(s) 69
BstMBI GATC 1 cut(s) 66
BstMWI GCNNNNNNNGC 1 cut(s) 92
BstUI CGCG 2 cut(s) 113, 204
BstV1I GCAGC 1 cut(s) 102
BsuRI GGCC 1 cut(s) 86
BveI ACCTGC 1 cut(s) 184
Cac8I GCNNGC 1 cut(s) 93
CfoI GCGC 1 cut(s) 115
CseI GACGC 1 cut(s) 193
Csp6I GTAC 1 cut(s) 197
CviJI RGCY 2 cut(s) 12, 86
CviKI_1 RGCY 2 cut(s) 12, 86
CviQI GTAC 1 cut(s) 197
DdeI CTNAG 1 cut(s) 163
DpnI GATC 1 cut(s) 68
DpnII GATC 1 cut(s) 66
Eam1104I CTCTTC 2 cut(s) 143, 164
EarI CTCTTC 2 cut(s) 143, 164
Fnu4HI GCNGC 1 cut(s) 116
Fsp4HI GCNGC 1 cut(s) 116
GlaI GCGC 1 cut(s) 114
GluI GCNGC 1 cut(s) 116
HaeIII GGCC 1 cut(s) 86
HgaI GACGC 1 cut(s) 193
HhaI GCGC 1 cut(s) 115
Hin6I GCGC 1 cut(s) 113
HinP1I GCGC 1 cut(s) 113
HinfI GANTC 1 cut(s) 149
HphI GGTGA 1 cut(s) 188
Hpy188I TCNGA 2 cut(s) 59, 73
Hpy188III TCNNGA 2 cut(s) 47, 146
Hpy99I CGWCG 2 cut(s) 204, 209
HpyCH4V TGCA 2 cut(s) 118, 186
HpyF10VI GCNNNNNNNGC 1 cut(s) 92
HpyF3I CTNAG 1 cut(s) 163
HspAI GCGC 1 cut(s) 113
Kzo9I GATC 1 cut(s) 66
LmnI GCTCC 1 cut(s) 17
LpnPI CCDG 2 cut(s) 150, 179
Lsp1109I GCAGC 1 cut(s) 102
MalI GATC 1 cut(s) 68
MbiI CCGCTC 1 cut(s) 181
MboI GATC 1 cut(s) 66
MboII GAAGA 4 cut(s) 125, 130, 144, 151
MluCI AATT 1 cut(s) 74
MluI ACGCGT 1 cut(s) 202
MmeI TCCRAC 1 cut(s) 37
MnlI CCTC 2 cut(s) 134, 153
MseI TTAA 1 cut(s) 211
MvnI CGCG 2 cut(s) 113, 204
MwoI GCNNNNNNNGC 1 cut(s) 92
NdeII GATC 1 cut(s) 66
NlaIV GGNNCC 1 cut(s) 13
PfeI GAWTC 1 cut(s) 149
PflFI GACNNNGTC 2 cut(s) 53, 101
PkrI GCNGC 1 cut(s) 117
PspN4I GGNNCC 1 cut(s) 13
PsyI GACNNNGTC 2 cut(s) 53, 101
RsaI GTAC 1 cut(s) 198
RsaNI GTAC 1 cut(s) 197
SaqAI TTAA 1 cut(s) 211
SatI GCNGC 1 cut(s) 116
Sau3AI GATC 1 cut(s) 66
SetI ASST 3 cut(s) 57, 169, 198
Sse9I AATT 1 cut(s) 74
SsiI CCGC 2 cut(s) 111, 181
TaqI TCGA 1 cut(s) 147
TasI AATT 1 cut(s) 74
TfiI GAWTC 1 cut(s) 149
Tru1I TTAA 1 cut(s) 211
Tru9I TTAA 1 cut(s) 211
TseI GCWGC 1 cut(s) 115
Tth111I GACNNNGTC 2 cut(s) 53, 101
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.