AT3G51330

Belongs to the peptidase A1 family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
19053272 .. 19056447
3176 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G51330.2

Sequence Viewer

Length: 1590 bp
ATGGTCGTTGCACGCCAAGTGTTTGTGTTATTGTCTCTGTTAGTTGTGTGTTGGGGATTGGAGAGATGTGAGGCTTCTGGGAAGTTTAGCTTTGAAGTTCACCATATGTTCTCTGATAGGGTCAAGCAAAGTCTTGGACTTGACGATCTAGTGCCGGAAAAGGGAAGTTTGGAGTACTTCAAGGTTTTGGCACAGCGTGATCGGTTGATCAGAGGTCGAGGTCTTGCCTCCAACAACGAAGAAACCCCTATTACTTTCATGCGGGGAAATCGCACGATTTCAATCGACCTTCTGGGATTCTTGCACTACGCCAATGTCTCTGTGGGAACACCGGCCACTTGGTTCCTGGTGGCTCTGGACACCGGAAGCGATTTGTTTTGGTTGCCTTGCAATTGCGGTTCCACTTGTATCCGTGACTTGAAAGAAGTTGGACTTTCACAGAGTCGACCACTCAATCTATACAGCCCCAACACATCTTCTACAAGTTCAAGCATTAGATGCAGTGATGACCGTTGTTTTGGGTCGAGCCGGTGTTCTTCTCCTGCAAGTAGTTGCCCTTATCAGATCCAGTACCTTTCTAAGGACACCTTTACCACCGGGACATTGTTTGAGGATGTATTGCATTTGGTCACAGAGGACGAGGGTTTAGAGCCTGTTAAAGCTAATATCACGCTTGGTTGCGGTAAGAATCAGACAGGTTTTCTCCAGAGTAGTGCGGCTGTTAATGGTCTTCTCGGGCTAGGTTTGAAAGATTACTCTGTTCCGAGCATACTGGCAAAAGCAAAAATCACTGCAAACTCTTTCTCAATGTGTTTCGGGAATATCATTGACGTTGTCGGAAGAATCAGCTTCGGTGACAAAGGATACACAGACCAGATGGAGACGCCACTACTTCCTACCGAACCAAGTCCGACATATGCTGTGAGTGTGACCGAAGTATCTGTAGGGGGAGATGCTGTTGGGGTTCAGCTGCTAGCTCTCTTCGACACTGGAACATCATTTACACATTTACTAGAACCAGAATATGGTCTTATTACCAAAGCTTTTGACGATCATGTCACTGACAAGCGACGTCCGATTGATCCTGAGCTTCCATTTGAGTTCTGTTACGACTTAAGTCCAAACAAAACAACCATTTTATTCCCCAGAGTAGCGATGACTTTTGAAGGAGGATCCCAAATGTTTCTGAGAAATCCGCTTTTCATAGTGTGGAATGAGGACAATAGCGCCATGTACTGCTTGGGTATTCTGAAGAGCGTGGATTTCAAGATTAACATTATCGGACAGAACTTCATGTCTGGCTACCGCATTGTATTCGACCGGGAGAGGATGATTTTGGGTTGGAAACGGTCTGATTGTTTTGAAGATGAAAGCTTGGAATCAACGACTCCTCCACCACCAGAGACTGAAGCTCCTTCACCAAGTGCCTCCACTCCGTTACCTAGTCTTCTTCCTCCTCCTGCTGCAGCTACACCTCCCCAAATAGACCCTCGTAACTCTACCAGAAACTCTGGCACAGGCACTGCAGCCAATCTAGTCCCTCTCGCATCTCAACTCCTACTTCTCCTACCTCTTTTGGCCTTCCTCTGA

Protein Analysis

529

Amino Acids

57.86

Weight (kDa)

5.02

Isoelectric Point (pI)

44.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TAXi_N PF14543 103 - 286 5.1e-36 Xylanase inhibitor N-terminal
Asp PF00026 103 - 431 1.1e-17 Eukaryotic aspartyl protease
TAXi_C PF14541 306 - 428 2e-13 Xylanase inhibitor C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1055
AatII GACGTC 1 cut(s) 1075
AccB7I CCANNNNNTGG 1 cut(s) 1025
AccI GTMKAC 1 cut(s) 445
AciI CCGC 6 cut(s) 262, 396, 681, 716, 1196, 1306
AclWI GGATC 4 cut(s) 559, 1076, 1167, 1180
AcoI YGGCCR 1 cut(s) 333
AcuI CTGAAG 2 cut(s) 1271, 1428
AcyI GRCGYC 2 cut(s) 884, 1072
AdeI CACNNNGTG 2 cut(s) 197, 1424
AfaI GTAC 3 cut(s) 176, 572, 1235
AfiI CCNNNNNNNGG 3 cut(s) 161, 580, 1025
AflII CTTAAG 1 cut(s) 1114
AgsI TTSAA 9 cut(s) 95, 181, 282, 421, 489, 748, 1166, 1267, 1364
AjnI CCWGG 1 cut(s) 345
Alw26I GTCTC 4 cut(s) 39, 322, 875, 1397
AlwI GGATC 4 cut(s) 559, 1076, 1167, 1180
AlwNI CAGNNNCTG 2 cut(s) 1406, 1523
Ama87I CYCGRG 1 cut(s) 734
AoxI GGCC 2 cut(s) 333, 1578
ApeKI GCWGC 4 cut(s) 970, 1463, 1466, 1526
ArsI GACNNNNNNTTYG 2 cut(s) 500, 532
AspLEI GCGC 1 cut(s) 1229
AsuC2I CCSGG 2 cut(s) 598, 1322
AsuHPI GGTGA 3 cut(s) 92, 866, 1410
AsuNHI GCTAGC 1 cut(s) 973
AvaI CYCGRG 1 cut(s) 734
BaeI ACNNNNGTAYC 2 cut(s) 921, 954
BamHI GGATCC 1 cut(s) 1172
BbsI GAAGAC 2 cut(s) 722, 1439
BbvI GCAGC 4 cut(s) 957, 1450, 1478, 1538
BccI CCATC 1 cut(s) 871
BcgI CGANNNNNNTGC 2 cut(s) 1297, 1331
BciT130I CCWGG 1 cut(s) 347
BciVI GTATCC 2 cut(s) 419, 857
BclI TGATCA 1 cut(s) 207
BcnI CCSGG 2 cut(s) 598, 1322
BcoDI GTCTC 4 cut(s) 39, 322, 875, 1397
BfaI CTAG 6 cut(s) 149, 740, 974, 1013, 1443, 1535
BfmI CTRYAG 3 cut(s) 942, 1464, 1524
BfoI RGCGCY 1 cut(s) 1230
BfrI CTTAAG 1 cut(s) 1114
BfuI GTATCC 2 cut(s) 419, 857
BisI GCNGC 5 cut(s) 717, 971, 1464, 1467, 1527
BlsI GCNGC 5 cut(s) 718, 972, 1465, 1468, 1528
BmcAI AGTACT 1 cut(s) 176
Bme1390I CCNGG 3 cut(s) 347, 598, 1322
BmeT110I CYCGRG 1 cut(s) 734
BmiI GGNNCC 3 cut(s) 344, 400, 1174
BmrFI CCNGG 3 cut(s) 347, 598, 1322
BmsI GCATC 3 cut(s) 488, 943, 1556
BmtI GCTAGC 1 cut(s) 977
BoxI GACNNNNGTC 1 cut(s) 1116
BpiI GAAGAC 2 cut(s) 722, 1439
BpmI CTGGAG 1 cut(s) 689
Bpu10I CCTNAGC 1 cut(s) 1086
BpuMI CCSGG 2 cut(s) 598, 1322
BsaBI GATNNNNATC 1 cut(s) 281
BsaHI GRCGYC 2 cut(s) 884, 1072
BsaWI WCCGGW 1 cut(s) 362
BsaXI ACNNNNNCTCC 6 cut(s) 942, 972, 1375, 1396, 1405, 1426
Bsc4I CCNNNNNNNGG 3 cut(s) 161, 580, 1025
Bse118I RCCGGY 2 cut(s) 331, 528
Bse1I ACTGG 3 cut(s) 568, 777, 994
Bse8I GATNNNNATC 1 cut(s) 281
BseBI CCWGG 1 cut(s) 347
BseGI GGATG 2 cut(s) 619, 1335
BseJI GATNNNNATC 1 cut(s) 281
BseLI CCNNNNNNNGG 3 cut(s) 161, 580, 1025
BseMII CTCAG 2 cut(s) 1077, 1178
BseNI ACTGG 3 cut(s) 568, 777, 994
BseRI GAGGAG 2 cut(s) 1380, 1446
BseXI GCAGC 4 cut(s) 957, 1450, 1478, 1538
Bsh1285I CGRYCG 1 cut(s) 1321
BshFI GGCC 2 cut(s) 335, 1580
BsiEI CGRYCG 1 cut(s) 1321
BsiHKCI CYCGRG 1 cut(s) 734
BsiSI CCGG 6 cut(s) 155, 332, 363, 529, 597, 1321
BslFI GGGAC 2 cut(s) 613, 1523
BslI CCNNNNNNNGG 3 cut(s) 161, 580, 1025
BsmAI GTCTC 4 cut(s) 39, 322, 875, 1397
BsmBI CGTCTC 1 cut(s) 875
BsmFI GGGAC 2 cut(s) 613, 1523
BsnI GGCC 2 cut(s) 335, 1580
BsoBI CYCGRG 1 cut(s) 734
Bsp143I GATC 7 cut(s) 145, 199, 207, 564, 1051, 1081, 1172
BspACI CCGC 6 cut(s) 262, 396, 681, 716, 1196, 1306
BspANI GGCC 2 cut(s) 335, 1580
BspCNI CTCAG 2 cut(s) 1078, 1179
BspLI GGNNCC 3 cut(s) 344, 400, 1174
BspMAI CTGCAG 2 cut(s) 1468, 1528
BspOI GCTAGC 1 cut(s) 977
BspPI GGATC 4 cut(s) 559, 1076, 1167, 1180
BspQI GCTCTTC 1 cut(s) 1247
BspTI CTTAAG 1 cut(s) 1114
BsrFI RCCGGY 2 cut(s) 331, 528
BsrI ACTGG 3 cut(s) 568, 777, 994
BssAI RCCGGY 2 cut(s) 331, 528
BssMI GATC 7 cut(s) 145, 199, 207, 564, 1051, 1081, 1172
BssNI GRCGYC 2 cut(s) 884, 1072
Bst2UI CCWGG 1 cut(s) 347
Bst4CI ACNGT 2 cut(s) 512, 1350
Bst6I CTCTTC 2 cut(s) 986, 1247
BstACI GRCGYC 2 cut(s) 884, 1072
BstAFI CTTAAG 1 cut(s) 1114
BstAPI GCANNNNNTGC 1 cut(s) 498
BstC8I GCNNGC 2 cut(s) 13, 975
BstDEI CTNAG 3 cut(s) 579, 1086, 1187
BstENI CCTNNNNNAGG 1 cut(s) 578
BstF5I GGATG 2 cut(s) 619, 1335
BstH2I RGCGCY 1 cut(s) 1230
BstHHI GCGC 1 cut(s) 1229
BstKTI GATC 7 cut(s) 148, 202, 210, 567, 1054, 1084, 1175
BstMAI GTCTC 4 cut(s) 39, 322, 875, 1397
BstMBI GATC 7 cut(s) 145, 199, 207, 564, 1051, 1081, 1172
BstMCI CGRYCG 1 cut(s) 1321
BstMWI GCNNNNNNNGC 1 cut(s) 498
BstNI CCWGG 1 cut(s) 347
BstPAI GACNNNNGTC 1 cut(s) 1116
BstSCI CCNGG 3 cut(s) 345, 596, 1320
BstSFI CTRYAG 3 cut(s) 942, 1464, 1524
BstV1I GCAGC 4 cut(s) 957, 1450, 1478, 1538
BstV2I GAAGAC 2 cut(s) 722, 1439
BstX2I RGATCY 2 cut(s) 564, 1172
BstYI RGATCY 2 cut(s) 564, 1172
BsuI GTATCC 2 cut(s) 419, 857
BsuRI GGCC 2 cut(s) 335, 1580
BtgZI GCGATG 1 cut(s) 1169
BtsCI GGATG 2 cut(s) 619, 1335
BtsI GCAGTG 3 cut(s) 508, 789, 1521
BtsIMutI CAGTG 5 cut(s) 508, 789, 987, 1059, 1521
Cac8I GCNNGC 2 cut(s) 13, 975
CaiI CAGNNNCTG 2 cut(s) 1406, 1523
CfoI GCGC 1 cut(s) 1229
Cfr10I RCCGGY 2 cut(s) 331, 528
CseI GACGC 1 cut(s) 892
Csp6I GTAC 3 cut(s) 175, 571, 1234
CviAII CATG 4 cut(s) 259, 1055, 1231, 1294
CviQI GTAC 3 cut(s) 175, 571, 1234
DdeI CTNAG 3 cut(s) 579, 1086, 1187
DpnI GATC 7 cut(s) 147, 201, 209, 566, 1053, 1083, 1174
DpnII GATC 7 cut(s) 145, 199, 207, 564, 1051, 1081, 1172
DraIII CACNNNGTG 2 cut(s) 197, 1424
DrdI GACNNNNNNGTC 1 cut(s) 1055
DseDI GACNNNNNNGTC 1 cut(s) 1055
EaeI YGGCCR 1 cut(s) 333
Eam1104I CTCTTC 2 cut(s) 986, 1247
EarI CTCTTC 2 cut(s) 986, 1247
Eco57I CTGAAG 2 cut(s) 1271, 1428
Eco88I CYCGRG 1 cut(s) 734
EcoNI CCTNNNNNAGG 1 cut(s) 578
EcoRII CCWGG 1 cut(s) 345
Esp3I CGTCTC 1 cut(s) 875
FaeI CATG 4 cut(s) 262, 1058, 1234, 1297
FalI AAGNNNNNCTT 6 cut(s) 74, 106, 417, 449, 572, 604
FaqI GGGAC 2 cut(s) 613, 1523
FatI CATG 4 cut(s) 258, 1054, 1230, 1293
FauI CCCGC 1 cut(s) 255
FauNDI CATATG 2 cut(s) 105, 916
FbaI TGATCA 1 cut(s) 207
FblI GTMKAC 1 cut(s) 445
Fnu4HI GCNGC 5 cut(s) 717, 971, 1464, 1467, 1527
FokI GGATG 2 cut(s) 626, 1342
Fsp4HI GCNGC 5 cut(s) 717, 971, 1464, 1467, 1527
FspBI CTAG 6 cut(s) 149, 740, 974, 1013, 1443, 1535
GlaI GCGC 1 cut(s) 1228
GluI GCNGC 5 cut(s) 717, 971, 1464, 1467, 1527
GsuI CTGGAG 1 cut(s) 689
HaeII RGCGCY 1 cut(s) 1230
HaeIII GGCC 2 cut(s) 335, 1580
HapII CCGG 6 cut(s) 155, 332, 363, 529, 597, 1321
HgaI GACGC 1 cut(s) 892
HhaI GCGC 1 cut(s) 1229
Hin1I GRCGYC 2 cut(s) 884, 1072
Hin1II CATG 4 cut(s) 262, 1058, 1234, 1297
Hin6I GCGC 1 cut(s) 1227
HinP1I GCGC 1 cut(s) 1227
HincII GTYRAC 1 cut(s) 446
HindII GTYRAC 1 cut(s) 446
HindIII AAGCTT 2 cut(s) 1041, 1372
HinfI GANTC 6 cut(s) 297, 442, 688, 843, 1379, 1387
HpaII CCGG 6 cut(s) 155, 332, 363, 529, 597, 1321
HphI GGTGA 3 cut(s) 92, 866, 1410
Hpy166II GTNNAC 2 cut(s) 100, 446
Hpy188III TCNNGA 5 cut(s) 356, 706, 817, 1085, 1267
Hpy8I GTNNAC 2 cut(s) 100, 446
Hpy99I CGWCG 1 cut(s) 1074
HpyAV CCTTC 3 cut(s) 299, 1160, 1425
HpyCH4III ACNGT 2 cut(s) 512, 1350
HpyCH4IV ACGT 2 cut(s) 831, 1072
HpyCH4V TGCA 9 cut(s) 11, 304, 390, 501, 545, 622, 794, 1466, 1526
HpyF10VI GCNNNNNNNGC 1 cut(s) 498
HpyF3I CTNAG 3 cut(s) 579, 1086, 1187
HpySE526I ACGT 2 cut(s) 831, 1072
Hsp92I GRCGYC 2 cut(s) 884, 1072
Hsp92II CATG 4 cut(s) 262, 1058, 1234, 1297
HspAI GCGC 1 cut(s) 1227
Ksp22I TGATCA 1 cut(s) 207
Kzo9I GATC 7 cut(s) 145, 199, 207, 564, 1051, 1081, 1172
LguI GCTCTTC 1 cut(s) 1247
LmnI GCTCC 1 cut(s) 1417
Lsp1109I GCAGC 4 cut(s) 957, 1450, 1478, 1538
LweI GCATC 3 cut(s) 488, 943, 1556
MaeI CTAG 6 cut(s) 149, 740, 974, 1013, 1443, 1535
MaeII ACGT 2 cut(s) 831, 1072
MaeIII GTNAC 8 cut(s) 413, 628, 854, 928, 1057, 1106, 1437, 1493
MalI GATC 7 cut(s) 147, 201, 209, 566, 1053, 1083, 1174
MboI GATC 7 cut(s) 145, 199, 207, 564, 1051, 1081, 1172
MfeI CAATTG 1 cut(s) 391
MflI RGATCY 2 cut(s) 564, 1172
MluCI AATT 1 cut(s) 391
MlyI GAGTC 2 cut(s) 451, 1381
MmeI TCCRAC 5 cut(s) 255, 409, 817, 935, 1322
MseI TTAA 4 cut(s) 657, 723, 1115, 1272
MspA1I CMGCKG 1 cut(s) 970
MspCI CTTAAG 1 cut(s) 1114
MspI CCGG 6 cut(s) 155, 332, 363, 529, 597, 1321
MspR9I CCNGG 3 cut(s) 347, 598, 1322
MunI CAATTG 1 cut(s) 391
MvaI CCWGG 1 cut(s) 347
MwoI GCNNNNNNNGC 1 cut(s) 498
NciI CCSGG 2 cut(s) 598, 1322
NdeI CATATG 2 cut(s) 105, 916
NdeII GATC 7 cut(s) 145, 199, 207, 564, 1051, 1081, 1172
NheI GCTAGC 1 cut(s) 973
NlaIII CATG 4 cut(s) 262, 1058, 1234, 1297
NlaIV GGNNCC 3 cut(s) 344, 400, 1174
NmuCI GTSAC 5 cut(s) 413, 628, 854, 928, 1057
PciSI GCTCTTC 1 cut(s) 1247
PfeI GAWTC 4 cut(s) 297, 688, 843, 1379
PflFI GACNNNGTC 1 cut(s) 833
PflMI CCANNNNNTGG 1 cut(s) 1025
PkrI GCNGC 5 cut(s) 718, 972, 1465, 1468, 1528
PleI GAGTC 2 cut(s) 450, 1381
PpsI GAGTC 2 cut(s) 450, 1381
PshAI GACNNNNGTC 1 cut(s) 1116
Psp6I CCWGG 1 cut(s) 345
PspGI CCWGG 1 cut(s) 345
PspN4I GGNNCC 3 cut(s) 344, 400, 1174
PsrI GAACNNNNNNTAC 2 cut(s) 985, 1017
PstI CTGCAG 2 cut(s) 1468, 1528
PstNI CAGNNNCTG 2 cut(s) 1406, 1523
PsuI RGATCY 2 cut(s) 564, 1172
PsyI GACNNNGTC 1 cut(s) 833
PvuII CAGCTG 1 cut(s) 970
RsaI GTAC 3 cut(s) 176, 572, 1235
RsaNI GTAC 3 cut(s) 175, 571, 1234
SalI GTCGAC 1 cut(s) 444
SapI GCTCTTC 1 cut(s) 1247
SaqAI TTAA 4 cut(s) 657, 723, 1115, 1272
SatI GCNGC 5 cut(s) 717, 971, 1464, 1467, 1527
Sau3AI GATC 7 cut(s) 145, 199, 207, 564, 1051, 1081, 1172
ScaI AGTACT 1 cut(s) 176
SchI GAGTC 2 cut(s) 451, 1381
ScrFI CCNGG 3 cut(s) 347, 598, 1322
SfaNI GCATC 3 cut(s) 488, 943, 1556
SfcI CTRYAG 3 cut(s) 942, 1464, 1524
SmlI CTYRAG 1 cut(s) 1114
SmoI CTYRAG 1 cut(s) 1114
Sse9I AATT 1 cut(s) 391
SsiI CCGC 6 cut(s) 262, 396, 681, 716, 1196, 1306
SspMI CTAG 6 cut(s) 149, 740, 974, 1013, 1443, 1535
StyD4I CCNGG 3 cut(s) 345, 596, 1320
TaaI ACNGT 2 cut(s) 512, 1350
TaiI ACGT 2 cut(s) 834, 1075
TaqI TCGA 6 cut(s) 217, 285, 445, 524, 984, 1317
TaqII GACCGA 1 cut(s) 947
TasI AATT 1 cut(s) 391
TatI WGTACW 2 cut(s) 174, 1233
TauI GCSGC 1 cut(s) 719
TfiI GAWTC 4 cut(s) 297, 688, 843, 1379
Tru1I TTAA 4 cut(s) 657, 723, 1115, 1272
Tru9I TTAA 4 cut(s) 657, 723, 1115, 1272
TscAI CASTG 5 cut(s) 508, 796, 994, 1066, 1528
TseFI GTSAC 5 cut(s) 413, 628, 854, 928, 1057
TseI GCWGC 4 cut(s) 970, 1463, 1466, 1526
Tsp45I GTSAC 5 cut(s) 413, 628, 854, 928, 1057
TspDTI ATGAA 4 cut(s) 247, 1192, 1282, 1383
TspGWI ACGGA 2 cut(s) 401, 1425
TspRI CASTG 5 cut(s) 508, 796, 994, 1066, 1528
Tth111I GACNNNGTC 1 cut(s) 833
Van91I CCANNNNNTGG 1 cut(s) 1025
Vha464I CTTAAG 1 cut(s) 1114
XagI CCTNNNNNAGG 1 cut(s) 578
XcmI CCANNNNNNNNNTGG 3 cut(s) 319, 343, 1237
XmiI GTMKAC 1 cut(s) 445
XspI CTAG 6 cut(s) 149, 740, 974, 1013, 1443, 1535
ZraI GACGTC 1 cut(s) 1073
ZrmI AGTACT 1 cut(s) 176
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.