Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0001552

Physical Location & Seq

Genomic Coordinates Reverse (-)

81792668 .. 81801331

Gene Structure 8664 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00143860.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2238 bp

ATGGCCTCCTGGACTTCCAGAGCTCCTAGCAGCAACTCTACTCTCTTGCCTTTGTTACTGGTTTTCGTATTGGGTTTGGCTTTTCGGAGCTGTAACGGGTTTGGTATGTACGGGATTCATTTCCACCACCGGTCCTCGGATCCCGTCACCGGAATTCTCGGCTACGATGAGCTCCCGCAAAAGGGGAGTCCTGAATATTACACTGCCATGACTCACCGGGACCGGTTGATCCGAGGCCGCCACCTCGGCGAAACGACGCCGCTTACTTTCGTTTACGGCAACGATACTTACCGGATTGCCGCTTTTGGACACTTGCATTATGCGAATGTTTCTGTTGGGACTCCAAGGACTTCGTATCTTGTGGCTTTGGATAGTGGCAGTGATTTATTGTGGTTGCCTTGTGATTGTATCAGTTGTGTGAAGGGATTTAATACATCCGATGGAGAGATCATGGTGGACCGAGGCGTTCACGGTGATCCAAATCCAACTGCAATCGAGATTGGTGTTAGAGGTGGGTTCTTGGTTCTTGGTCTGTCAGCTGTGATGGTAGGTGGGGATGTGATTCAGATCAGGACGGTGTCGAGAGGTGACGTCGGAGGTGTTATTCTGGGTTTGGGCGATGGCAACGGGACCTGGAGAGGGTGCGAAGATTGCGTTGATCAGGCGCCGGCTTTTGGGGCTACCTGGATCTCTGAGGTAGAGGGTGGTGGTCTAGCTCCAAGCTGGAGAGATGGAAGGTGTGGCGGTGGATGTGCTGATAGAGGTGGTGGCCCGGCTGCTGGTGGAAGGCAAGGGTGCAGCGTCTTTGCTCTGGCTACATTTGCGGTTGGTGATGGTAGGGATCGCGATATGGTGGCTGATCCGCTCTTGGATCGGCTTCAGGTCTTTGGTCCTCAGATTGAAATGCCCGAAGAAGGTTTGCTACTCGGGGAAGCATGTTTGTCTACACCTAAAGGTGTTGGGATTCCCGAAGAAGATGATGGAGCCTGGTTAAATCCAGGCAAGCTAGTTCGGGGCTTTTCCACTATTGGTGGTGGAGCTTTAAGTGATACAAGCTACTCGTGGGGTTCTTCTCGCTTTGGATGTGGCGACCAAAGTAAAGGTGGTAGTGGCGACGGAAACCAAGGTGGTAGCGGCGGCGAGGTAGCAGTAGCTTCCTTATGGTTTGTGTTGACTGGTTCTCTTGGGCATGGTCTGTTACGGTTTCCCATATCTGGGCTTTTTGGTTTCCATGGTGGATCTTGGGCTTTAGTACGTAGAGTGGTGGATTTTGACATCTACAGCCCTAATAAATCAACAAGCAGCAAAATGGTTCCTTGCAACAGCACATATTGCGAACAACAACAGCTGTGCTCTTCACCAAGTAGTGATTGTCCTTACATTATTAACTATCTTTCTCCTAACAGTTCATCTTCTGGACTCGTAGTAGAGGACGTTTTGCACTTGACTACTGATGATGCTAAACTAAAAGTTGTCGAGGCACCGATAGCCTTTGGGTGTGGTAGGTATCAGACTGGTATATTTTTAAGTGGGGCAGCTCCCAATGGTCTATTAGGGCTTGGTATGGATGGTGTATCCATTCCTAGCATGTTAGCAAAACAGGGGCTTGCTTCAGATTCTTTTTCCATGTGTTTTGGAATTGATGGAGGTGGGAGAATTAGATTTGGTGATAATGGAAGTGTAGGCCAACCAGAAACACCATTCTATGTCAAAGATATCCATCCAACTTACAACATTACGGTTACTCAAATAGCCGTTGGAAAAAGTGTTGCTGATCTTGAATTCTATGCAATTTGGGACTCTGGTACCTCATTTACGTACCTAAATGATCCAGCTTACACCCAGATTTCTAAGAGTTTCAACAGCGCCATCAAAGATAAGCGGGTTACAGATAATTCTGATCTTCCTTTTGAATATTGTTATACAGTCAGTCCAAATCAAACGTTGAATTTGACAATGAAAGGCGGAAAGCATTATAATGTTATTGATCCACTTGTAGTTTTTTCTGATGGGGAAGGAAATATACTGCTCTATTGTCTGGGCGTTGTCAAAAGTGAAGATGTAAATATCATTGGACAAAACTTCATGACCGGTTACCGTATAATCTTTGATCGCGAGAAGATGGTACTGGGTTGGACAGAGTCAGATTGTTACAATGATGAAGAAACCTCAACTGTTCCCATCAGTCCATCCGAATCTCCCTCCTCATCCAAATGTCCGGCCTCATCCCCCACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004190 GO:0005575 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0016020 GO:0016787 GO:0019538 GO:0030163 GO:0031224 GO:0031225 GO:0043170 GO:0044238 GO:0044425 GO:0070001 GO:0070011 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko04138 map04138

Pfam Domains

Protein Families

TAXi_C TAXi_N

Protein Analysis

745

Amino Acids

79.01

Weight (kDa)

4.88

Isoelectric Point (pI)

40.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TAXi_N	PF14543	426 - 557	4.1e-23	Xylanase inhibitor N-terminal
Asp	PF00026	455 - 711	2.6e-14	Eukaryotic aspartyl protease
TAXi_C	PF14541	577 - 713	3.9e-13	Xylanase inhibitor C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001552)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17760 AT3G51330 AT3G51330 AT3G51330 AT3G51340 AT3G51340 AT3G51340 AT3G51340 AT3G51350
fragaria_vesca	FvH4_1g11190 FvH4_1g11190 FvH4_1g11190 FvH4_1g11190 FvH4_1g11190 FvH4_1g11190
malus_domestica	MD02G1124400.v1.1 MD02G1124500.v1.1 MD15G1238500.v1.1
prunus_persica	Prupe.7G173900_v2.0.a1
pyrus_communis	pycom02g09720
rosa_chinensis	RchiOBHm_Chr2g0098521 RchiOBHm_Chr2g0098531 RchiOBHm_Chr2g0098551 RchiOBHm_Chr2g0098601 RchiOBHm_Chr5g0032521
rosa_laevigata	RLG00000016804 RLG00000016805 RLG00000016809 RLG00000016811 RLG00000036276
rosa_roxburghii	Rroxscaffold_2G00143860 Rroxscaffold_2G00143910
rosa_rugosa	Rorug02G0073700
rosa_samantha	Rh2AG121000 Rh2AG121200 Rh2AG473700 Rh2BG124100 Rh2BG124200 Rh2BG124400 Rh2BG124600 Rh2BG124800 Rh2CG125600 Rh2CG125700 Rh2CG459400 Rh2DG126200 Rh2DG126700 Rh2DG126900 Rh5AG278400
rosa_wichuraiana	Rw0G004110 Rw2G009490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1977
AatII	GACGTC	1 cut(s)	594
Acc65I	GGTACC	1 cut(s)	1805
AccB1I	GGYRCC	3 cut(s)	664, 1480, 1805
AccBSI	CCGCTC	1 cut(s)	865
AccI	GTMKAC	1 cut(s)	944
AccII	CGCG	2 cut(s)	846, 2115
AclI	AACGTT	1 cut(s)	1943
AcsI	RAATTY	3 cut(s)	153, 1781, 1948
AcuI	CTGAAG	2 cut(s)	863, 1596
AcyI	GRCGYC	3 cut(s)	257, 591, 665
AfaI	GTAC	5 cut(s)	110, 1254, 1807, 1820, 2127
AgeI	ACCGGT	3 cut(s)	129, 222, 2090
AgsI	TTSAA	5 cut(s)	902, 1781, 1861, 1913, 1948
AjnI	CCWGG	5 cut(s)	8, 632, 683, 986, 997
Alw21I	GWGCWC	3 cut(s)	25, 174, 1355
Ama87I	CYCGRG	1 cut(s)	926
AoxI	GGCC	5 cut(s)	3, 235, 769, 1684, 2220
ApeKI	GCWGC	5 cut(s)	30, 776, 798, 1302, 1535
ApoI	RAATTY	3 cut(s)	153, 1781, 1948
ArsI	GACNNNNNNTTYG	2 cut(s)	172, 204
AsiGI	ACCGGT	3 cut(s)	129, 222, 2090
Asp718I	GGTACC	1 cut(s)	1805
AspLEI	GCGC	2 cut(s)	667, 1868
AspS9I	GGNCC	6 cut(s)	132, 220, 457, 630, 770, 890
AsuC2I	CCSGG	2 cut(s)	218, 773
AsuHPI	GGTGA	7 cut(s)	139, 206, 485, 599, 842, 1350, 1679
AvaI	CYCGRG	1 cut(s)	926
AvaII	GGWCC	5 cut(s)	132, 220, 457, 630, 890
BaeI	ACNNNNGTAYC	2 cut(s)	1789, 1822
BamHI	GGATCC	1 cut(s)	139
BanI	GGYRCC	3 cut(s)	664, 1480, 1805
BanII	GRGCYC	2 cut(s)	25, 174
BarI	GAAGNNNNNNTAC	4 cut(s)	906, 938, 2007, 2039
BauI	CACGAG	1 cut(s)	1060
Bbv12I	GWGCWC	3 cut(s)	25, 174, 1355
BbvI	GCAGC	5 cut(s)	42, 763, 810, 1314, 1547
BceAI	ACGGC	2 cut(s)	292, 1739
BciT130I	CCWGG	5 cut(s)	10, 634, 685, 988, 999
BciVI	GTATCC	1 cut(s)	1585
BclI	TGATCA	1 cut(s)	658
BcnI	CCSGG	2 cut(s)	218, 773
BfaI	CTAG	4 cut(s)	27, 713, 1007, 1584
BfmI	CTRYAG	1 cut(s)	1279
BfoI	RGCGCY	2 cut(s)	668, 1869
BfuI	GTATCC	1 cut(s)	1585
BglI	GCCNNNNNGGC	1 cut(s)	246
Bme1390I	CCNGG	7 cut(s)	10, 218, 634, 685, 773, 988, 999
Bme18I	GGWCC	5 cut(s)	132, 220, 457, 630, 890
BmeT110I	CYCGRG	1 cut(s)	926
BmgT120I	GGNCC	6 cut(s)	132, 220, 457, 630, 770, 890
BmiI	GGNNCC	8 cut(s)	141, 221, 631, 666, 985, 1314, 1482, 1807
BmrFI	CCNGG	7 cut(s)	10, 218, 634, 685, 773, 988, 999
BmrI	ACTGGG	1 cut(s)	2138
BmsI	GCATC	1 cut(s)	1447
BmuI	ACTGGG	1 cut(s)	2138
BpmI	CTGGAG	2 cut(s)	655, 745
BpuMI	CCSGG	2 cut(s)	218, 773
BsaAI	YACGTR	2 cut(s)	1256, 1818
BsaBI	GATNNNNATC	3 cut(s)	480, 566, 1719
BsaHI	GRCGYC	3 cut(s)	257, 591, 665
BsaJI	CCNNGG	7 cut(s)	135, 232, 244, 344, 460, 1123, 1231
BsaWI	WCCGGW	5 cut(s)	129, 149, 222, 291, 2090
Bse118I	RCCGGY	4 cut(s)	129, 222, 667, 2090
Bse1I	ACTGG	4 cut(s)	63, 1180, 1519, 2133
Bse8I	GATNNNNATC	3 cut(s)	480, 566, 1719
BseBI	CCWGG	5 cut(s)	10, 634, 685, 988, 999
BseDI	CCNNGG	7 cut(s)	135, 232, 244, 344, 460, 1123, 1231
BseGI	GGATG	9 cut(s)	434, 562, 755, 1088, 1573, 1720, 2189, 2207, 2225
BseJI	GATNNNNATC	3 cut(s)	480, 566, 1719
BseMII	CTCAG	2 cut(s)	684, 908
BseNI	ACTGG	4 cut(s)	63, 1180, 1519, 2133
BseRI	GAGGAG	1 cut(s)	2194
BseXI	GCAGC	5 cut(s)	42, 763, 810, 1314, 1547
BsgI	GTGCAG	1 cut(s)	817
Bsh1236I	CGCG	2 cut(s)	846, 2115
BshFI	GGCC	5 cut(s)	5, 237, 771, 1686, 2222
BshNI	GGYRCC	3 cut(s)	664, 1480, 1805
BshTI	ACCGGT	3 cut(s)	129, 222, 2090
BsiHKAI	GWGCWC	3 cut(s)	25, 174, 1355
BsiHKCI	CYCGRG	1 cut(s)	926
BsiSI	CCGG	9 cut(s)	130, 150, 217, 223, 292, 668, 773, 2091, 2219
BslFI	GGGAC	4 cut(s)	233, 352, 643, 1811
BsmFI	GGGAC	4 cut(s)	233, 352, 643, 1811
BsnI	GGCC	5 cut(s)	5, 237, 771, 1686, 2222
BsoBI	CYCGRG	1 cut(s)	926
Bsp1286I	GDGCHC	3 cut(s)	25, 174, 1355
Bsp19I	CCATGG	1 cut(s)	1231
Bsp68I	TCGCGA	2 cut(s)	846, 2115
BspANI	GGCC	5 cut(s)	5, 237, 771, 1686, 2222
BspCNI	CTCAG	2 cut(s)	685, 907
BspFNI	CGCG	2 cut(s)	846, 2115
BspHI	TCATGA	1 cut(s)	2085
BspLI	GGNNCC	8 cut(s)	141, 221, 631, 666, 985, 1314, 1482, 1807
BspQI	GCTCTTC	1 cut(s)	1360
BspT107I	GGYRCC	3 cut(s)	664, 1480, 1805
BsrBI	CCGCTC	1 cut(s)	865
BsrFI	RCCGGY	4 cut(s)	129, 222, 667, 2090
BsrI	ACTGG	4 cut(s)	63, 1180, 1519, 2133
BssAI	RCCGGY	4 cut(s)	129, 222, 667, 2090
BssECI	CCNNGG	7 cut(s)	135, 232, 244, 344, 460, 1123, 1231
BssNI	GRCGYC	3 cut(s)	257, 591, 665
BssSI	CACGAG	1 cut(s)	1060
BssT1I	CCWWGG	3 cut(s)	344, 1123, 1231
Bst2BI	CACGAG	1 cut(s)	1060
Bst2UI	CCWGG	5 cut(s)	10, 634, 685, 988, 999
Bst4CI	ACNGT	8 cut(s)	473, 577, 1203, 1406, 1741, 1927, 2099, 2176
Bst6I	CTCTTC	1 cut(s)	1360
BstACI	GRCGYC	3 cut(s)	257, 591, 665
BstAPI	GCANNNNNTGC	1 cut(s)	1332
BstBAI	YACGTR	2 cut(s)	1256, 1818
BstC8I	GCNNGC	3 cut(s)	669, 1004, 1608
BstDEI	CTNAG	3 cut(s)	693, 894, 1851
BstDSI	CCRYGG	1 cut(s)	1231
BstEII	GGTNACC	1 cut(s)	2093
BstF5I	GGATG	9 cut(s)	434, 562, 755, 1088, 1573, 1720, 2189, 2207, 2225
BstFNI	CGCG	2 cut(s)	846, 2115
BstH2I	RGCGCY	2 cut(s)	668, 1869
BstHHI	GCGC	2 cut(s)	667, 1868
BstMWI	GCNNNNNNNGC	6 cut(s)	246, 651, 677, 821, 1332, 1487
BstNI	CCWGG	5 cut(s)	10, 634, 685, 988, 999
BstNSI	RCATGY	2 cut(s)	939, 1591
BstPI	GGTNACC	1 cut(s)	2093
BstSCI	CCNGG	7 cut(s)	8, 216, 632, 683, 771, 986, 997
BstSFI	CTRYAG	1 cut(s)	1279
BstSNI	TACGTA	2 cut(s)	1256, 1818
BstUI	CGCG	2 cut(s)	846, 2115
BstV1I	GCAGC	5 cut(s)	42, 763, 810, 1314, 1547
BstX2I	RGATCY	3 cut(s)	139, 687, 1238
BstYI	RGATCY	3 cut(s)	139, 687, 1238
BsuI	GTATCC	1 cut(s)	1585
BsuRI	GGCC	5 cut(s)	5, 237, 771, 1686, 2222
BtgI	CCRYGG	1 cut(s)	1231
BtgZI	GCGATG	1 cut(s)	633
BtsCI	GGATG	9 cut(s)	434, 562, 755, 1088, 1573, 1720, 2189, 2207, 2225
BtsI	GCAGTG	2 cut(s)	201, 385
BtsIMutI	CAGTG	2 cut(s)	201, 385
BtuMI	TCGCGA	2 cut(s)	846, 2115
Cac8I	GCNNGC	3 cut(s)	669, 1004, 1608
CciI	TCATGA	1 cut(s)	2085
CfoI	GCGC	2 cut(s)	667, 1868
Cfr10I	RCCGGY	4 cut(s)	129, 222, 667, 2090
Cfr13I	GGNCC	6 cut(s)	132, 220, 457, 630, 770, 890
CseI	GACGC	2 cut(s)	265, 790
Csp6I	GTAC	5 cut(s)	109, 1253, 1806, 1819, 2126
CspAI	ACCGGT	3 cut(s)	129, 222, 2090
CviAII	CATG	8 cut(s)	208, 451, 936, 1190, 1232, 1588, 1627, 2086
CviQI	GTAC	5 cut(s)	109, 1253, 1806, 1819, 2126
DdeI	CTNAG	3 cut(s)	693, 894, 1851
DinI	GGCGCC	1 cut(s)	666
Eam1104I	CTCTTC	1 cut(s)	1360
EarI	CTCTTC	1 cut(s)	1360
EciI	GGCGGA	1 cut(s)	1980
Ecl136II	GAGCTC	2 cut(s)	23, 172
Eco105I	TACGTA	2 cut(s)	1256, 1818
Eco130I	CCWWGG	3 cut(s)	344, 1123, 1231
Eco24I	GRGCYC	2 cut(s)	25, 174
Eco32I	GATATC	1 cut(s)	1717
Eco47I	GGWCC	5 cut(s)	132, 220, 457, 630, 890
Eco53kI	GAGCTC	2 cut(s)	23, 172
Eco57I	CTGAAG	2 cut(s)	863, 1596
Eco88I	CYCGRG	1 cut(s)	926
Eco91I	GGTNACC	1 cut(s)	2093
EcoICRI	GAGCTC	2 cut(s)	23, 172
EcoO109I	RGGNCCY	1 cut(s)	630
EcoO65I	GGTNACC	1 cut(s)	2093
EcoRI	GAATTC	2 cut(s)	153, 1781
EcoRII	CCWGG	5 cut(s)	8, 632, 683, 986, 997
EcoRV	GATATC	1 cut(s)	1717
EcoT14I	CCWWGG	3 cut(s)	344, 1123, 1231
EcoT38I	GRGCYC	2 cut(s)	25, 174
EgeI	GGCGCC	1 cut(s)	666
EheI	GGCGCC	1 cut(s)	666
ErhI	CCWWGG	3 cut(s)	344, 1123, 1231
FaeI	CATG	8 cut(s)	211, 454, 939, 1193, 1235, 1591, 1630, 2089
FaqI	GGGAC	4 cut(s)	233, 352, 643, 1811
FatI	CATG	8 cut(s)	207, 450, 935, 1189, 1231, 1587, 1626, 2085
FauI	CCCGC	2 cut(s)	183, 1875
FbaI	TGATCA	1 cut(s)	658
FblI	GTMKAC	1 cut(s)	944
FokI	GGATG	9 cut(s)	421, 569, 762, 1095, 1580, 1707, 2176, 2194, 2212
FriOI	GRGCYC	2 cut(s)	25, 174
FspBI	CTAG	4 cut(s)	27, 713, 1007, 1584
GlaI	GCGC	2 cut(s)	666, 1867
GsuI	CTGGAG	2 cut(s)	655, 745
HaeII	RGCGCY	2 cut(s)	668, 1869
HaeIII	GGCC	5 cut(s)	5, 237, 771, 1686, 2222
HapII	CCGG	9 cut(s)	130, 150, 217, 223, 292, 668, 773, 2091, 2219
HgaI	GACGC	2 cut(s)	265, 790
HhaI	GCGC	2 cut(s)	667, 1868
Hin1I	GRCGYC	3 cut(s)	257, 591, 665
Hin1II	CATG	8 cut(s)	211, 454, 939, 1193, 1235, 1591, 1630, 2089
Hin6I	GCGC	2 cut(s)	665, 1866
HinP1I	GCGC	2 cut(s)	665, 1866
HincII	GTYRAC	1 cut(s)	1173
HindII	GTYRAC	1 cut(s)	1173
HpaII	CCGG	9 cut(s)	130, 150, 217, 223, 292, 668, 773, 2091, 2219
HphI	GGTGA	7 cut(s)	139, 206, 485, 599, 842, 1350, 1679
Hpy166II	GTNNAC	5 cut(s)	274, 457, 469, 945, 1173
Hpy8I	GTNNAC	5 cut(s)	274, 457, 469, 945, 1173
Hpy99I	CGWCG	3 cut(s)	259, 596, 1118
HpyAV	CCTTC	5 cut(s)	415, 729, 780, 908, 2009
HpyCH4III	ACNGT	8 cut(s)	473, 577, 1203, 1406, 1741, 1927, 2099, 2176
HpyCH4IV	ACGT	5 cut(s)	591, 1255, 1434, 1817, 1943
HpyCH4V	TGCA	6 cut(s)	316, 491, 798, 1320, 1441, 1790
HpyF10VI	GCNNNNNNNGC	6 cut(s)	246, 651, 677, 821, 1332, 1487
HpyF3I	CTNAG	3 cut(s)	693, 894, 1851
HpySE526I	ACGT	5 cut(s)	591, 1255, 1434, 1817, 1943
Hsp92I	GRCGYC	3 cut(s)	257, 591, 665
Hsp92II	CATG	8 cut(s)	211, 454, 939, 1193, 1235, 1591, 1630, 2089
HspAI	GCGC	2 cut(s)	665, 1866
KasI	GGCGCC	1 cut(s)	664
KpnI	GGTACC	1 cut(s)	1809
KroI	GCCGGC	1 cut(s)	667
KroNI	GCCGGC	1 cut(s)	669
Ksp22I	TGATCA	1 cut(s)	658
LguI	GCTCTTC	1 cut(s)	1360
LmnI	GCTCC	7 cut(s)	28, 87, 177, 721, 983, 1037, 1543
Lsp1109I	GCAGC	5 cut(s)	42, 763, 810, 1314, 1547
LweI	GCATC	1 cut(s)	1447
MaeI	CTAG	4 cut(s)	27, 713, 1007, 1584
MaeII	ACGT	5 cut(s)	591, 1255, 1434, 1817, 1943
MaeIII	GTNAC	9 cut(s)	54, 92, 145, 587, 1197, 1741, 1885, 2093, 2150
MbiI	CCGCTC	1 cut(s)	865
MflI	RGATCY	3 cut(s)	139, 687, 1238
MhlI	GDGCHC	3 cut(s)	25, 174, 1355
MluCI	AATT	7 cut(s)	153, 1638, 1656, 1781, 1791, 1894, 1948
Mly113I	GGCGCC	1 cut(s)	665
MlyI	GAGTC	6 cut(s)	196, 205, 334, 1413, 1793, 2150
MmeI	TCCRAC	5 cut(s)	509, 574, 1738, 1748, 2114
MroNI	GCCGGC	1 cut(s)	667
MseI	TTAA	5 cut(s)	429, 992, 1043, 1386, 1526
MslI	CAYNNNNRTG	3 cut(s)	206, 1977, 2212
MspA1I	CMGCKG	2 cut(s)	539, 1348
MspI	CCGG	9 cut(s)	130, 150, 217, 223, 292, 668, 773, 2091, 2219
MspR9I	CCNGG	7 cut(s)	10, 218, 634, 685, 773, 988, 999
MvaI	CCWGG	5 cut(s)	10, 634, 685, 988, 999
MvnI	CGCG	2 cut(s)	846, 2115
MwoI	GCNNNNNNNGC	6 cut(s)	246, 651, 677, 821, 1332, 1487
NaeI	GCCGGC	1 cut(s)	669
NarI	GGCGCC	1 cut(s)	665
NciI	CCSGG	2 cut(s)	218, 773
NcoI	CCATGG	1 cut(s)	1231
NgoMIV	GCCGGC	1 cut(s)	667
NlaIII	CATG	8 cut(s)	211, 454, 939, 1193, 1235, 1591, 1630, 2089
NlaIV	GGNNCC	8 cut(s)	141, 221, 631, 666, 985, 1314, 1482, 1807
NmeAIII	GCCGAG	2 cut(s)	138, 225
NmuCI	GTSAC	2 cut(s)	145, 587
NruI	TCGCGA	2 cut(s)	846, 2115
NspI	RCATGY	2 cut(s)	939, 1591
PagI	TCATGA	1 cut(s)	2085
PciSI	GCTCTTC	1 cut(s)	1360
PdiI	GCCGGC	1 cut(s)	669
PfeI	GAWTC	5 cut(s)	115, 562, 964, 1616, 2195
PflFI	GACNNNGTC	2 cut(s)	577, 2140
PfoI	TCCNGGA	1 cut(s)	8
PinAI	ACCGGT	3 cut(s)	129, 222, 2090
PleI	GAGTC	6 cut(s)	195, 205, 334, 1413, 1793, 2149
PluTI	GGCGCC	1 cut(s)	668
PpsI	GAGTC	6 cut(s)	195, 205, 334, 1413, 1793, 2149
Ppu21I	YACGTR	2 cut(s)	1256, 1818
PpuMI	RGGWCCY	1 cut(s)	630
PsiI	TTATAA	1 cut(s)	1977
Psp124BI	GAGCTC	2 cut(s)	25, 174
Psp1406I	AACGTT	1 cut(s)	1943
Psp5II	RGGWCCY	1 cut(s)	630
Psp6I	CCWGG	5 cut(s)	8, 632, 683, 986, 997
PspEI	GGTNACC	1 cut(s)	2093
PspGI	CCWGG	5 cut(s)	8, 632, 683, 986, 997
PspN4I	GGNNCC	8 cut(s)	141, 221, 631, 666, 985, 1314, 1482, 1807
PspPI	GGNCC	6 cut(s)	132, 220, 457, 630, 770, 890
PspPPI	RGGWCCY	1 cut(s)	630
PsuI	RGATCY	3 cut(s)	139, 687, 1238
PsyI	GACNNNGTC	2 cut(s)	577, 2140
PvuII	CAGCTG	2 cut(s)	539, 1348
RruI	TCGCGA	2 cut(s)	846, 2115
RsaI	GTAC	5 cut(s)	110, 1254, 1807, 1820, 2127
RsaNI	GTAC	5 cut(s)	109, 1253, 1806, 1819, 2126
RseI	CAYNNNNRTG	3 cut(s)	206, 1977, 2212
SacI	GAGCTC	2 cut(s)	25, 174
SapI	GCTCTTC	1 cut(s)	1360
SaqAI	TTAA	5 cut(s)	429, 992, 1043, 1386, 1526
Sau96I	GGNCC	6 cut(s)	132, 220, 457, 630, 770, 890
SchI	GAGTC	6 cut(s)	196, 205, 334, 1413, 1793, 2150
ScrFI	CCNGG	7 cut(s)	10, 218, 634, 685, 773, 988, 999
SduI	GDGCHC	3 cut(s)	25, 174, 1355
SfaNI	GCATC	1 cut(s)	1447
SfcI	CTRYAG	1 cut(s)	1279
SfoI	GGCGCC	1 cut(s)	666
SinI	GGWCC	5 cut(s)	132, 220, 457, 630, 890
SmiMI	CAYNNNNRTG	3 cut(s)	206, 1977, 2212
SnaBI	TACGTA	2 cut(s)	1256, 1818
Sse9I	AATT	7 cut(s)	153, 1638, 1656, 1781, 1791, 1894, 1948
SspDI	GGCGCC	1 cut(s)	664
SspI	AATATT	2 cut(s)	197, 1916
SspMI	CTAG	4 cut(s)	27, 713, 1007, 1584
SstI	GAGCTC	2 cut(s)	25, 174
StyD4I	CCNGG	7 cut(s)	8, 216, 632, 683, 771, 986, 997
StyI	CCWWGG	3 cut(s)	344, 1123, 1231
TaaI	ACNGT	8 cut(s)	473, 577, 1203, 1406, 1741, 1927, 2099, 2176
TaiI	ACGT	5 cut(s)	594, 1258, 1437, 1820, 1946
TaqI	TCGA	3 cut(s)	495, 581, 1476
TaqII	GACCGA	1 cut(s)	474
TasI	AATT	7 cut(s)	153, 1638, 1656, 1781, 1791, 1894, 1948
TauI	GCSGC	5 cut(s)	240, 262, 302, 1137, 1140
TfiI	GAWTC	5 cut(s)	115, 562, 964, 1616, 2195
Tru1I	TTAA	5 cut(s)	429, 992, 1043, 1386, 1526
Tru9I	TTAA	5 cut(s)	429, 992, 1043, 1386, 1526
TscAI	CASTG	2 cut(s)	208, 385
TseFI	GTSAC	2 cut(s)	145, 587
TseI	GCWGC	5 cut(s)	30, 776, 798, 1302, 1535
Tsp45I	GTSAC	2 cut(s)	145, 587
TspDTI	ATGAA	5 cut(s)	107, 1398, 1973, 2074, 2175
TspGWI	ACGGA	1 cut(s)	1131
TspRI	CASTG	2 cut(s)	208, 385
Tth111I	GACNNNGTC	2 cut(s)	577, 2140
VpaK11BI	GGWCC	5 cut(s)	132, 220, 457, 630, 890
XapI	RAATTY	3 cut(s)	153, 1781, 1948
XceI	RCATGY	2 cut(s)	939, 1591
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1100
XmiI	GTMKAC	1 cut(s)	944
XspI	CTAG	4 cut(s)	27, 713, 1007, 1584
ZraI	GACGTC	1 cut(s)	592

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.