AT3G51350

Belongs to the peptidase A1 family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
19060261 .. 19063538
3278 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G51350.1

Sequence Viewer

Length: 1587 bp
ATGGACGTTGCACGCCAAGTGTTTGTGTTATTGTCTGTGTTAGTGGTGTGTTGGGGATTTGAGAGATGTGAGGCTACTGGGAAGTTTGGCTTCGAAGTCCACCACATTTTCTCTGATTCCGTCAAGCAAAGTCTTGGTCTTGGCGATCTAGTTCCGGAACAGGGAAGTTTGGAGTACTTCAAGGTTTTGGCTCATCGCGATCGCTTGATTAGAGGTCGAGGTCTTGCCTCTAACAACGATGAAACCCCGATCACTTTCGATGGGGGAAACCTCACGGTTTCAGTCAAGCTTCTGGGATCTCTGTACTACGCCAATGTCTCTGTGGGAACACCACCTTCTTCGTTCCTGGTGGCTCTGGACACAGGCAGTGATTTGTTTTGGTTGCCTTGCAATTGCGGTACTACTTGTATCCGTGACTTGGAAGACATTGGAGTTCCACAGAGTGTACCACTCAATCTATACACTCCCAACGCGTCGACTACAAGTTCAAGCATTCGTTGCAGCGACAAGCGTTGTTTTGGATCTAAAAAGTGTTCTTCTCCTTCAAGTATTTGCCCTTATCAGATTTCCTACTCTAACAGCACAGGCACCAAAGGGACATTGTTACAGGATGTATTACATCTGGCTACAGAGGATGAAAATTTAACACCTGTCAAAGCTAATGTCACGCTTGGTTGCGGTCAGAAGCAGACAGGTCTGTTCCAGAGAAACAATTCTGTGAATGGTGTTCTTGGGCTTGGTATTAAAGGTTACTCTGTTCCAAGCCTTCTGGCAAAAGCCAATATCACTGCAAACTCCTTCTCAATGTGCTTCGGGCGTGTCATTGGCAATGTCGGAAGAATCAGTTTTGGAGACAGAGGCTACACAGACCAGGAGGAGACTCCATTCATTTCTGTTGCACCAAGTACCGCTTATGGTGTGAACATTTCGGGAGTATCAGTGGCGGGAGATCCTGTTGACATTCGCCTGTTTGCAAAATTCGACACTGGCTCATCATTTACACACTTGCGGGAGCCAGCATATGGCGTTCTTACCAAATCTTTTGACGAACTTGTTGAGGACAGGCGACGCCCAGTTGATCCCGAGCTTCCGTTTGAGTTCTGTTACGACTTGAGCCCAAACGCTACAACCATACAGTTCCCCTTAGTAGAGATGACTTTTATAGGAGGATCCAAAATCATCCTCAACAATCCGTTTTTCACTGCACGGACTCAGGAGGGTAATGTGATGTACTGCTTGGGTGTTCTGAAGAGCGTAGGTCTCAAGATTAACGTCATAGGACAGAACTTTGTGGCTGGCTACCGCATTGTATTCGATCGGGAGAGGATGATTTTGGGTTGGAAGCAGTCTCTTTGTTTTGAAGATGAAAGCTTGGAATCTACAACTCCTCCACCACCAGAGGTCGAAGCTCCTGCACCAAGTGTATCCGCTCCACCACCTCGTTCTCTTCCTCCTACTGTTTCCGCTACACCGCCCCCAATCAACCCTCGTAACTCCACTGGAAACCCTGGTACAGGCGGTGCAGCCAATCTCATCCCTCTCGCATCTCAACTCCTACTTCTCCTACCTCTTTTGGCCTTCCTGTGA

Protein Analysis

528

Amino Acids

56.85

Weight (kDa)

5.57

Isoelectric Point (pI)

40.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TAXi_N PF14543 102 - 285 5.4e-38 Xylanase inhibitor N-terminal
Asp PF00026 102 - 443 3.6e-22 Eukaryotic aspartyl protease
TAXi_C PF14541 304 - 448 2.2e-16 Xylanase inhibitor C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 587
AccB7I CCANNNNNTGG 1 cut(s) 1022
AccBSI CCGCTC 1 cut(s) 1430
AccI GTMKAC 1 cut(s) 476
AccII CGCG 2 cut(s) 198, 473
AccIII TCCGGA 1 cut(s) 154
AclWI GGATC 6 cut(s) 304, 529, 944, 1073, 1164, 1177
AcsI RAATTY 2 cut(s) 640, 977
AcuI CTGAAG 1 cut(s) 1268
AcyI GRCGYC 1 cut(s) 1069
AdeI CACNNNGTG 2 cut(s) 443, 1421
AfaI GTAC 7 cut(s) 176, 305, 400, 447, 907, 1232, 1513
AfiI CCNNNNNNNGG 4 cut(s) 161, 418, 1022, 1514
AflIII ACRYGT 1 cut(s) 471
AgsI TTSAA 4 cut(s) 181, 489, 546, 1361
AjnI CCWGG 3 cut(s) 345, 870, 1507
AluBI AGCT 5 cut(s) 289, 659, 1087, 1371, 1409
AluI AGCT 5 cut(s) 289, 659, 1087, 1371, 1409
Alw26I GTCTC 5 cut(s) 322, 846, 872, 1265, 1353
AlwI GGATC 6 cut(s) 304, 529, 944, 1073, 1164, 1177
Ama87I CYCGRG 1 cut(s) 1082
Aor13HI TCCGGA 1 cut(s) 154
AoxI GGCC 1 cut(s) 1575
ApeKI GCWGC 2 cut(s) 501, 1523
ApoI RAATTY 2 cut(s) 640, 977
ArsI GACNNNNNNTTYG 4 cut(s) 121, 153, 648, 680
AsiSI GCGATCGC 1 cut(s) 202
Asp700I GAANNNNTTC 1 cut(s) 712
AsuII TTCGAA 1 cut(s) 93
AvaI CYCGRG 1 cut(s) 1082
BamHI GGATCC 1 cut(s) 1169
BanI GGYRCC 1 cut(s) 587
BanII GRGCYC 1 cut(s) 1118
BbsI GAAGAC 1 cut(s) 429
BbvI GCAGC 2 cut(s) 513, 1535
BccI CCATC 1 cut(s) 254
BcgI CGANNNNNNTGC 4 cut(s) 1294, 1328, 1394, 1428
BciT130I CCWGG 3 cut(s) 347, 872, 1509
BciVI GTATCC 2 cut(s) 419, 1435
BcoDI GTCTC 5 cut(s) 322, 846, 872, 1265, 1353
BfaI CTAG 1 cut(s) 149
BfmI CTRYAG 1 cut(s) 627
BfuI GTATCC 2 cut(s) 419, 1435
BisI GCNGC 2 cut(s) 502, 1524
BlsI GCNGC 2 cut(s) 503, 1525
BmcAI AGTACT 1 cut(s) 176
Bme1390I CCNGG 3 cut(s) 347, 872, 1509
BmeT110I CYCGRG 1 cut(s) 1082
BmiI GGNNCC 3 cut(s) 589, 1014, 1171
BmrFI CCNGG 3 cut(s) 347, 872, 1509
BmrI ACTGGG 2 cut(s) 87, 1067
BmsI GCATC 1 cut(s) 1553
BmuI ACTGGG 2 cut(s) 87, 1067
BpiI GAAGAC 1 cut(s) 429
Bpu14I TTCGAA 1 cut(s) 93
BpuEI CTTGAG 2 cut(s) 1132, 1247
BsaHI GRCGYC 1 cut(s) 1069
BsaI GGTCTC 1 cut(s) 1265
BsaJI CCNNGG 1 cut(s) 1507
BsaWI WCCGGW 1 cut(s) 154
BsaXI ACNNNNNCTCC 6 cut(s) 924, 939, 954, 969, 1372, 1402
Bsc4I CCNNNNNNNGG 4 cut(s) 161, 418, 1022, 1514
Bse1I ACTGG 4 cut(s) 82, 991, 1073, 1504
Bse3DI GCAATG 1 cut(s) 835
BseAI TCCGGA 1 cut(s) 154
BseBI CCWGG 3 cut(s) 347, 872, 1509
BseDI CCNNGG 1 cut(s) 1507
BseGI GGATG 5 cut(s) 616, 640, 1179, 1332, 1533
BseLI CCNNNNNNNGG 4 cut(s) 161, 418, 1022, 1514
BseMI GCAATG 1 cut(s) 835
BseMII CTCAG 1 cut(s) 1226
BseNI ACTGG 4 cut(s) 82, 991, 1073, 1504
BseRI GAGGAG 2 cut(s) 890, 1377
BseXI GCAGC 2 cut(s) 513, 1535
BsgI GTGCAG 3 cut(s) 1188, 1398, 1542
Bsh1236I CGCG 2 cut(s) 198, 473
Bsh1285I CGRYCG 2 cut(s) 202, 1318
BshFI GGCC 1 cut(s) 1577
BshNI GGYRCC 1 cut(s) 587
BsiEI CGRYCG 2 cut(s) 202, 1318
BsiHKCI CYCGRG 1 cut(s) 1082
BsiSI CCGG 1 cut(s) 155
BslFI GGGAC 1 cut(s) 610
BslI CCNNNNNNNGG 4 cut(s) 161, 418, 1022, 1514
BsmAI GTCTC 5 cut(s) 322, 846, 872, 1265, 1353
BsmFI GGGAC 1 cut(s) 610
BsmI GAATGC 1 cut(s) 492
BsnI GGCC 1 cut(s) 1577
Bso31I GGTCTC 1 cut(s) 1265
BsoBI CYCGRG 1 cut(s) 1082
Bsp119I TTCGAA 1 cut(s) 93
Bsp1286I GDGCHC 1 cut(s) 1118
Bsp13I TCCGGA 1 cut(s) 154
Bsp143I GATC 9 cut(s) 145, 199, 249, 296, 521, 949, 1078, 1169, 1315
Bsp68I TCGCGA 1 cut(s) 198
BspANI GGCC 1 cut(s) 1577
BspCNI CTCAG 1 cut(s) 1225
BspEI TCCGGA 1 cut(s) 154
BspFNI CGCG 2 cut(s) 198, 473
BspLI GGNNCC 3 cut(s) 589, 1014, 1171
BspPI GGATC 6 cut(s) 304, 529, 944, 1073, 1164, 1177
BspQI GCTCTTC 1 cut(s) 1244
BspT104I TTCGAA 1 cut(s) 93
BspT107I GGYRCC 1 cut(s) 587
BspTNI GGTCTC 1 cut(s) 1265
BsrBI CCGCTC 1 cut(s) 1430
BsrDI GCAATG 1 cut(s) 835
BsrI ACTGG 4 cut(s) 82, 991, 1073, 1504
BssECI CCNNGG 1 cut(s) 1507
BssMI GATC 9 cut(s) 145, 199, 249, 296, 521, 949, 1078, 1169, 1315
BssNI GRCGYC 1 cut(s) 1069
Bst2UI CCWGG 3 cut(s) 347, 872, 1509
Bst4CI ACNGT 3 cut(s) 277, 1137, 1459
Bst6I CTCTTC 2 cut(s) 1244, 1452
BstACI GRCGYC 1 cut(s) 1069
BstAPI GCANNNNNTGC 1 cut(s) 498
BstBI TTCGAA 1 cut(s) 93
BstC8I GCNNGC 3 cut(s) 13, 1017, 1297
BstDEI CTNAG 2 cut(s) 1144, 1212
BstENI CCTNNNNNAGG 1 cut(s) 1512
BstF5I GGATG 5 cut(s) 616, 640, 1179, 1332, 1533
BstFNI CGCG 2 cut(s) 198, 473
BstKTI GATC 9 cut(s) 148, 202, 252, 299, 524, 952, 1081, 1172, 1318
BstMAI GTCTC 5 cut(s) 322, 846, 872, 1265, 1353
BstMBI GATC 9 cut(s) 145, 199, 249, 296, 521, 949, 1078, 1169, 1315
BstMCI CGRYCG 2 cut(s) 202, 1318
BstMWI GCNNNNNNNGC 1 cut(s) 498
BstNI CCWGG 3 cut(s) 347, 872, 1509
BstSCI CCNGG 3 cut(s) 345, 870, 1507
BstSFI CTRYAG 1 cut(s) 627
BstUI CGCG 2 cut(s) 198, 473
BstV1I GCAGC 2 cut(s) 513, 1535
BstV2I GAAGAC 1 cut(s) 429
BstX2I RGATCY 4 cut(s) 296, 521, 949, 1169
BstYI RGATCY 4 cut(s) 296, 521, 949, 1169
BsuI GTATCC 2 cut(s) 419, 1435
BsuRI GGCC 1 cut(s) 1577
BtgZI GCGATG 1 cut(s) 179
BtsCI GGATG 5 cut(s) 616, 640, 1179, 1332, 1533
BtsI GCAGTG 3 cut(s) 373, 786, 1200
BtsIMutI CAGTG 6 cut(s) 373, 786, 945, 984, 1200, 1497
BtuMI TCGCGA 1 cut(s) 198
Cac8I GCNNGC 3 cut(s) 13, 1017, 1297
CseI GACGC 2 cut(s) 462, 1077
Csp6I GTAC 7 cut(s) 175, 304, 399, 446, 906, 1231, 1512
CviQI GTAC 7 cut(s) 175, 304, 399, 446, 906, 1231, 1512
DdeI CTNAG 2 cut(s) 1144, 1212
DpnI GATC 9 cut(s) 147, 201, 251, 298, 523, 951, 1080, 1171, 1317
DpnII GATC 9 cut(s) 145, 199, 249, 296, 521, 949, 1078, 1169, 1315
DraIII CACNNNGTG 2 cut(s) 443, 1421
Eam1104I CTCTTC 2 cut(s) 1244, 1452
EarI CTCTTC 2 cut(s) 1244, 1452
Eco24I GRGCYC 1 cut(s) 1118
Eco31I GGTCTC 1 cut(s) 1265
Eco57I CTGAAG 1 cut(s) 1268
Eco88I CYCGRG 1 cut(s) 1082
EcoNI CCTNNNNNAGG 1 cut(s) 1512
EcoRII CCWGG 3 cut(s) 345, 870, 1507
EcoT38I GRGCYC 1 cut(s) 1118
FaiI YATR 7 cut(s) 460, 915, 1021, 1023, 1133, 1163, 1277
FalI AAGNNNNNCTT 4 cut(s) 74, 106, 895, 927
FaqI GGGAC 1 cut(s) 610
FauI CCCGC 2 cut(s) 937, 1002
FauNDI CATATG 1 cut(s) 1021
FblI GTMKAC 1 cut(s) 476
Fnu4HI GCNGC 2 cut(s) 502, 1524
FokI GGATG 5 cut(s) 623, 647, 1166, 1339, 1520
FriOI GRGCYC 1 cut(s) 1118
Fsp4HI GCNGC 2 cut(s) 502, 1524
FspBI CTAG 1 cut(s) 149
GluI GCNGC 2 cut(s) 502, 1524
HaeIII GGCC 1 cut(s) 1577
HapII CCGG 1 cut(s) 155
HgaI GACGC 2 cut(s) 462, 1077
Hin1I GRCGYC 1 cut(s) 1069
HincII GTYRAC 2 cut(s) 477, 958
HindII GTYRAC 2 cut(s) 477, 958
HindIII AAGCTT 2 cut(s) 287, 1369
HinfI GANTC 5 cut(s) 116, 840, 880, 1210, 1376
HpaII CCGG 1 cut(s) 155
Hpy166II GTNNAC 5 cut(s) 100, 446, 477, 922, 958
Hpy188I TCNGA 5 cut(s) 115, 564, 684, 836, 1248
Hpy188III TCNNGA 9 cut(s) 155, 197, 356, 703, 930, 1082, 1214, 1264, 1319
Hpy8I GTNNAC 5 cut(s) 100, 446, 477, 922, 958
Hpy99I CGWCG 2 cut(s) 478, 1071
HpyAV CCTTC 4 cut(s) 345, 552, 776, 808
HpyCH4III ACNGT 3 cut(s) 277, 1137, 1459
HpyCH4IV ACGT 2 cut(s) 6, 1272
HpyCH4V TGCA 9 cut(s) 11, 390, 501, 791, 899, 974, 1205, 1415, 1523
HpyF10VI GCNNNNNNNGC 1 cut(s) 498
HpyF3I CTNAG 2 cut(s) 1144, 1212
HpySE526I ACGT 2 cut(s) 6, 1272
Hsp92I GRCGYC 1 cut(s) 1069
Kpn2I TCCGGA 1 cut(s) 154
Kzo9I GATC 9 cut(s) 145, 199, 249, 296, 521, 949, 1078, 1169, 1315
LguI GCTCTTC 1 cut(s) 1244
LmnI GCTCC 3 cut(s) 1012, 1414, 1435
Lsp1109I GCAGC 2 cut(s) 513, 1535
LweI GCATC 1 cut(s) 1553
MaeI CTAG 1 cut(s) 149
MaeII ACGT 2 cut(s) 6, 1272
MaeIII GTNAC 6 cut(s) 413, 603, 664, 749, 1103, 1490
MalI GATC 9 cut(s) 147, 201, 251, 298, 523, 951, 1080, 1171, 1317
MbiI CCGCTC 1 cut(s) 1430
MboI GATC 9 cut(s) 145, 199, 249, 296, 521, 949, 1078, 1169, 1315
MboII GAAGA 7 cut(s) 330, 434, 528, 849, 1261, 1373, 1439
MfeI CAATTG 1 cut(s) 391
MflI RGATCY 4 cut(s) 296, 521, 949, 1169
MhlI GDGCHC 1 cut(s) 1118
MluCI AATT 4 cut(s) 391, 640, 712, 977
MluI ACGCGT 1 cut(s) 471
MlyI GAGTC 2 cut(s) 874, 1204
MmeI TCCRAC 2 cut(s) 814, 1319
MroI TCCGGA 1 cut(s) 154
MroXI GAANNNNTTC 1 cut(s) 712
MseI TTAA 3 cut(s) 644, 744, 1269
MspI CCGG 1 cut(s) 155
MspR9I CCNGG 3 cut(s) 347, 872, 1509
MunI CAATTG 1 cut(s) 391
Mva1269I GAATGC 1 cut(s) 492
MvaI CCWGG 3 cut(s) 347, 872, 1509
MvnI CGCG 2 cut(s) 198, 473
MwoI GCNNNNNNNGC 1 cut(s) 498
NdeI CATATG 1 cut(s) 1021
NdeII GATC 9 cut(s) 145, 199, 249, 296, 521, 949, 1078, 1169, 1315
NlaIV GGNNCC 3 cut(s) 589, 1014, 1171
NmuCI GTSAC 2 cut(s) 413, 664
NruI TCGCGA 1 cut(s) 198
NspV TTCGAA 1 cut(s) 93
PciSI GCTCTTC 1 cut(s) 1244
PctI GAATGC 1 cut(s) 492
PdmI GAANNNNTTC 1 cut(s) 712
PfeI GAWTC 3 cut(s) 116, 840, 1376
PflMI CCANNNNNTGG 1 cut(s) 1022
PkrI GCNGC 2 cut(s) 503, 1525
Ple19I CGATCG 2 cut(s) 202, 1318
PleI GAGTC 2 cut(s) 874, 1204
PpsI GAGTC 2 cut(s) 874, 1204
Psp6I CCWGG 3 cut(s) 345, 870, 1507
PspGI CCWGG 3 cut(s) 345, 870, 1507
PspN4I GGNNCC 3 cut(s) 589, 1014, 1171
PsuI RGATCY 4 cut(s) 296, 521, 949, 1169
PvuI CGATCG 2 cut(s) 202, 1318
RgaI GCGATCGC 1 cut(s) 202
RruI TCGCGA 1 cut(s) 198
RsaI GTAC 7 cut(s) 176, 305, 400, 447, 907, 1232, 1513
RsaNI GTAC 7 cut(s) 175, 304, 399, 446, 906, 1231, 1512
SalI GTCGAC 1 cut(s) 475
SapI GCTCTTC 1 cut(s) 1244
SaqAI TTAA 3 cut(s) 644, 744, 1269
SatI GCNGC 2 cut(s) 502, 1524
Sau3AI GATC 9 cut(s) 145, 199, 249, 296, 521, 949, 1078, 1169, 1315
ScaI AGTACT 1 cut(s) 176
SchI GAGTC 2 cut(s) 874, 1204
ScrFI CCNGG 3 cut(s) 347, 872, 1509
SduI GDGCHC 1 cut(s) 1118
SfaAI GCGATCGC 1 cut(s) 202
SfaNI GCATC 1 cut(s) 1553
SfcI CTRYAG 1 cut(s) 627
SfuI TTCGAA 1 cut(s) 93
SgfI GCGATCGC 1 cut(s) 202
SmlI CTYRAG 2 cut(s) 1111, 1262
SmoI CTYRAG 2 cut(s) 1111, 1262
Sse9I AATT 4 cut(s) 391, 640, 712, 977
SspMI CTAG 1 cut(s) 149
StyD4I CCNGG 3 cut(s) 345, 870, 1507
TaaI ACNGT 3 cut(s) 277, 1137, 1459
TaiI ACGT 2 cut(s) 9, 1275
TaqI TCGA 7 cut(s) 93, 217, 258, 476, 981, 1314, 1404
TasI AATT 4 cut(s) 391, 640, 712, 977
TatI WGTACW 3 cut(s) 174, 303, 1230
TfiI GAWTC 3 cut(s) 116, 840, 1376
Tru1I TTAA 3 cut(s) 644, 744, 1269
Tru9I TTAA 3 cut(s) 644, 744, 1269
TscAI CASTG 6 cut(s) 373, 793, 945, 991, 1207, 1504
TseFI GTSAC 2 cut(s) 413, 664
TseI GCWGC 2 cut(s) 501, 1523
Tsp45I GTSAC 2 cut(s) 413, 664
TspDTI ATGAA 4 cut(s) 255, 651, 877, 1380
TspGWI ACGGA 5 cut(s) 109, 401, 1080, 1182, 1222
TspRI CASTG 6 cut(s) 373, 793, 945, 991, 1207, 1504
Van91I CCANNNNNTGG 1 cut(s) 1022
XagI CCTNNNNNAGG 1 cut(s) 1512
XapI RAATTY 2 cut(s) 640, 977
XcmI CCANNNNNNNNNTGG 1 cut(s) 319
XmiI GTMKAC 1 cut(s) 476
XmnI GAANNNNTTC 1 cut(s) 712
XspI CTAG 1 cut(s) 149
ZrmI AGTACT 1 cut(s) 176
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.