RH2CG125700

Belongs to the peptidase A1 family

Basic Information

Type: Sequence Only
Biological Identity
rosa_samantha
Unknown
Physical Location & Seq
Reverse (-)
0 .. 0
1 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG125700.1

Sequence Viewer

Length: 1425 bp
ATGGCCGCCTGGACTGGCAGAGCTTCTAGTAGCAACTCTACTCTCTTGCCTTTGTTAGTGATTTTCGTGTTGGGTTTGGCTTGTCGGAGCTGTGACGGGTTCGGGACGTTCGGGTTTAATTTCCACCACCGGTTCTCGGATCCCGTCACCGGAATTCTCGGCTACGATGAACTCCCACAAAAGGGGAGTCCTGAATATTACGCTGCCATAACCCACCGTGACCGGTTGATCCGGGGCCGCCACCTCGGCGAAACGAAGACGCCGCTTACTTTCGTTTACGGCAACGAGACTTACCGGATTCCCGCTTTTGGACACTTGCATTATGCGAATGTTTCTGTTGGGACTCCAAGGACTTCGTATCTTGTGGCTTTGGATACAGGCAGTGATTTATTGTGGTTGCCGTGTGATTGTATCAGTTGTGTGAAGGGGTTTAATACATCAGATGGAGAGGTGGTGGATTTTGACATCTACAGCCCTAATAAATCAACAACAAGCAAAAAGGTTCCTTGCAACAGCACATATTGCGAACAACAACAGCTGTGCTCTTCACCAAGTAGTGATTGTCCTTATTTTATTAACTATCTTTCTGCTAGCACTTCATCTTCTGGAATCGTAGTAGAGGACGTTTTGCACTTGACTACTGATGATGCTAAACTAAAAGGTGTCGAGGCGCCGATAGCCTTTGGGTGTGGTAGGTATCAGACTGGTACATTTTTAAGTGGGGCAGCTCCCAATGGTTTATTAGGGCTTGGTATGGATGGTGTATCCATTCCTAGCATGTTAGCAAAACAGGGGCTTGCTTCAGATTCTTTTTCCATGTGTTTTGGAATTGATGGAGGTGGGAGAATTAGATTTGGTGATAATGGAAGTGTAGGCCAACCAGAAACACCATTCTATGTCAGAGATATTCCAACTTACAACATTACGGTTACTCAAATAGCCGTTGGAAAAAGTGTTGCTGATCTTGAATTCTATGCAATTTGGGACTCTGGTACCTCATTTACGTACCTAAATGATCCAGCTTACACCCAGATTTCTAAGAGTTTCAACAGCGCCATCAATGATAAGCGGGCTACAAATAATTCTGATCTTCCTTTTGAATATTGTTATACAGTCAGTCCAAATCAAACGTTGAATTTGACAATGAAAGGCGGAAAGCATTATAATGTTATTGATCCACTTGTACTTCTTCCTGATAGGGAAGGAAATATACTGCTCTATTGTCTGGGCGTTGTCAAAAGTGATGATGTAAATATCATTGGACAAAACTTCATGACCGGTTACCGTATAATATTTGATCGCGAGAAGCTGGTACTGGGTTGGACAGAGTCAGATTGTTACAATGATGAGGAAACCTCAACTGTTCCCATCAGTCCATCCGAATCTCCTTCCTCATCCAAATGTCCGGCCGCATCCCCAACTTGA

Protein Analysis

474

Amino Acids

51.46

Weight (kDa)

5.01

Isoelectric Point (pI)

39.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TAXi_N PF14543 108 - 287 4.7e-36 Xylanase inhibitor N-terminal
Asp PF00026 108 - 439 9.7e-23 Eukaryotic aspartyl protease
TAXi_C PF14541 306 - 442 5.8e-13 Xylanase inhibitor C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1164
Acc65I GGTACC 1 cut(s) 992
AccB1I GGYRCC 2 cut(s) 670, 992
AccII CGCG 1 cut(s) 1302
AciI CCGC 7 cut(s) 6, 238, 263, 303, 1069, 1152, 1410
AclI AACGTT 1 cut(s) 1130
AclWI GGATC 5 cut(s) 134, 147, 223, 1010, 1169
AcoI YGGCCR 2 cut(s) 3, 1407
AcsI RAATTY 3 cut(s) 153, 968, 1135
AcuI CTGAAG 1 cut(s) 786
AcyI GRCGYC 2 cut(s) 260, 671
AfaI GTAC 5 cut(s) 709, 994, 1007, 1185, 1314
AfiI CCNNNNNNNGG 5 cut(s) 136, 149, 181, 182, 308
AgeI ACCGGT 3 cut(s) 129, 222, 1277
AgsI TTSAA 4 cut(s) 968, 1048, 1100, 1135
AjnI CCWGG 1 cut(s) 8
AluBI AGCT 6 cut(s) 23, 90, 538, 728, 1022, 1309
AluI AGCT 6 cut(s) 23, 90, 538, 728, 1022, 1309
Alw21I GWGCWC 1 cut(s) 545
Alw26I GTCTC 1 cut(s) 281
AlwI GGATC 5 cut(s) 134, 147, 223, 1010, 1169
AoxI GGCC 4 cut(s) 3, 235, 874, 1407
ApeKI GCWGC 2 cut(s) 203, 725
ApoI RAATTY 3 cut(s) 153, 968, 1135
ArsI GACNNNNNNTTYG 2 cut(s) 172, 204
AsiGI ACCGGT 3 cut(s) 129, 222, 1277
Asp718I GGTACC 1 cut(s) 992
AspLEI GCGC 2 cut(s) 673, 1055
AspS9I GGNCC 1 cut(s) 235
AsuC2I CCSGG 1 cut(s) 233
AsuHPI GGTGA 3 cut(s) 139, 540, 869
AsuNHI GCTAGC 1 cut(s) 590
BaeI ACNNNNGTAYC 2 cut(s) 976, 1009
BamHI GGATCC 1 cut(s) 139
BanI GGYRCC 2 cut(s) 670, 992
BarI GAAGNNNNNNTAC 2 cut(s) 1194, 1226
BbsI GAAGAC 1 cut(s) 263
Bbv12I GWGCWC 1 cut(s) 545
BbvI GCAGC 2 cut(s) 190, 737
BccI CCATC 6 cut(s) 437, 752, 827, 1064, 1376, 1384
BceAI ACGGC 3 cut(s) 295, 385, 926
BciT130I CCWGG 1 cut(s) 10
BciVI GTATCC 2 cut(s) 367, 775
BcnI CCSGG 1 cut(s) 233
BcoDI GTCTC 1 cut(s) 281
BfaI CTAG 3 cut(s) 27, 591, 774
BfmI CTRYAG 1 cut(s) 469
BfoI RGCGCY 2 cut(s) 674, 1056
BfuI GTATCC 2 cut(s) 367, 775
BglI GCCNNNNNGGC 1 cut(s) 246
BisI GCNGC 6 cut(s) 6, 204, 238, 263, 726, 1410
BlsI GCNGC 6 cut(s) 7, 205, 239, 264, 727, 1411
Bme1390I CCNGG 2 cut(s) 10, 233
BmgT120I GGNCC 1 cut(s) 235
BmiI GGNNCC 5 cut(s) 141, 236, 504, 672, 994
BmrFI CCNGG 2 cut(s) 10, 233
BmrI ACTGGG 1 cut(s) 1325
BmsI GCATC 2 cut(s) 637, 1421
BmtI GCTAGC 1 cut(s) 594
BmuI ACTGGG 1 cut(s) 1325
BpiI GAAGAC 1 cut(s) 263
BplI GAGNNNNNCTC 2 cut(s) 1340, 1372
BpuMI CCSGG 1 cut(s) 233
BsaAI YACGTR 1 cut(s) 1005
BsaHI GRCGYC 2 cut(s) 260, 671
BsaJI CCNNGG 3 cut(s) 232, 244, 347
BsaWI WCCGGW 5 cut(s) 129, 149, 222, 294, 1277
BsaXI ACNNNNNCTCC 2 cut(s) 438, 468
Bsc4I CCNNNNNNNGG 5 cut(s) 136, 149, 181, 182, 308
Bse118I RCCGGY 3 cut(s) 129, 222, 1277
Bse1I ACTGG 3 cut(s) 19, 709, 1320
BseBI CCWGG 1 cut(s) 10
BseDI CCNNGG 3 cut(s) 232, 244, 347
BseGI GGATG 4 cut(s) 763, 1376, 1394, 1412
BseLI CCNNNNNNNGG 5 cut(s) 136, 149, 181, 182, 308
BseNI ACTGG 3 cut(s) 19, 709, 1320
BseX3I CGGCCG 1 cut(s) 1407
BseXI GCAGC 2 cut(s) 190, 737
Bsh1236I CGCG 1 cut(s) 1302
Bsh1285I CGRYCG 1 cut(s) 1410
BshFI GGCC 4 cut(s) 5, 237, 876, 1409
BshNI GGYRCC 2 cut(s) 670, 992
BshTI ACCGGT 3 cut(s) 129, 222, 1277
BsiEI CGRYCG 1 cut(s) 1410
BsiHKAI GWGCWC 1 cut(s) 545
BsiSI CCGG 7 cut(s) 130, 150, 223, 232, 295, 1278, 1406
BslFI GGGAC 3 cut(s) 118, 355, 998
BslI CCNNNNNNNGG 5 cut(s) 136, 149, 181, 182, 308
BsmAI GTCTC 1 cut(s) 281
BsmFI GGGAC 3 cut(s) 118, 355, 998
BsnI GGCC 4 cut(s) 5, 237, 876, 1409
Bsp1286I GDGCHC 1 cut(s) 545
Bsp143I GATC 7 cut(s) 139, 228, 961, 1015, 1087, 1174, 1297
Bsp68I TCGCGA 1 cut(s) 1302
BspACI CCGC 7 cut(s) 6, 238, 263, 303, 1069, 1152, 1410
BspANI GGCC 4 cut(s) 5, 237, 876, 1409
BspFNI CGCG 1 cut(s) 1302
BspHI TCATGA 1 cut(s) 1272
BspLI GGNNCC 5 cut(s) 141, 236, 504, 672, 994
BspOI GCTAGC 1 cut(s) 594
BspPI GGATC 5 cut(s) 134, 147, 223, 1010, 1169
BspQI GCTCTTC 1 cut(s) 550
BspT107I GGYRCC 2 cut(s) 670, 992
BsrFI RCCGGY 3 cut(s) 129, 222, 1277
BsrI ACTGG 3 cut(s) 19, 709, 1320
BssAI RCCGGY 3 cut(s) 129, 222, 1277
BssECI CCNNGG 3 cut(s) 232, 244, 347
BssMI GATC 7 cut(s) 139, 228, 961, 1015, 1087, 1174, 1297
BssNI GRCGYC 2 cut(s) 260, 671
BssT1I CCWWGG 1 cut(s) 347
Bst2UI CCWGG 1 cut(s) 10
Bst4CI ACNGT 5 cut(s) 218, 928, 1114, 1286, 1363
Bst6I CTCTTC 1 cut(s) 550
BstACI GRCGYC 2 cut(s) 260, 671
BstAPI GCANNNNNTGC 1 cut(s) 522
BstBAI YACGTR 1 cut(s) 1005
BstC8I GCNNGC 3 cut(s) 592, 798, 1071
BstDEI CTNAG 1 cut(s) 1038
BstEII GGTNACC 1 cut(s) 1280
BstF5I GGATG 4 cut(s) 763, 1376, 1394, 1412
BstFNI CGCG 1 cut(s) 1302
BstH2I RGCGCY 2 cut(s) 674, 1056
BstHHI GCGC 2 cut(s) 673, 1055
BstKTI GATC 7 cut(s) 142, 231, 964, 1018, 1090, 1177, 1300
BstMAI GTCTC 1 cut(s) 281
BstMBI GATC 7 cut(s) 139, 228, 961, 1015, 1087, 1174, 1297
BstMCI CGRYCG 1 cut(s) 1410
BstMWI GCNNNNNNNGC 3 cut(s) 246, 522, 677
BstNI CCWGG 1 cut(s) 10
BstNSI RCATGY 1 cut(s) 781
BstPI GGTNACC 1 cut(s) 1280
BstSCI CCNGG 2 cut(s) 8, 231
BstSFI CTRYAG 1 cut(s) 469
BstSNI TACGTA 1 cut(s) 1005
BstUI CGCG 1 cut(s) 1302
BstV1I GCAGC 2 cut(s) 190, 737
BstV2I GAAGAC 1 cut(s) 263
BstX2I RGATCY 1 cut(s) 139
BstYI RGATCY 1 cut(s) 139
BstZI CGGCCG 1 cut(s) 1407
BsuI GTATCC 2 cut(s) 367, 775
BsuRI GGCC 4 cut(s) 5, 237, 876, 1409
BtsCI GGATG 4 cut(s) 763, 1376, 1394, 1412
BtsI GCAGTG 1 cut(s) 388
BtsIMutI CAGTG 1 cut(s) 388
BtuMI TCGCGA 1 cut(s) 1302
Cac8I GCNNGC 3 cut(s) 592, 798, 1071
CciI TCATGA 1 cut(s) 1272
CfoI GCGC 2 cut(s) 673, 1055
Cfr10I RCCGGY 3 cut(s) 129, 222, 1277
Cfr13I GGNCC 1 cut(s) 235
CseI GACGC 1 cut(s) 268
Csp6I GTAC 5 cut(s) 708, 993, 1006, 1184, 1313
CspAI ACCGGT 3 cut(s) 129, 222, 1277
CviAII CATG 3 cut(s) 778, 817, 1273
CviQI GTAC 5 cut(s) 708, 993, 1006, 1184, 1313
DdeI CTNAG 1 cut(s) 1038
DinI GGCGCC 1 cut(s) 672
DpnI GATC 7 cut(s) 141, 230, 963, 1017, 1089, 1176, 1299
DpnII GATC 7 cut(s) 139, 228, 961, 1015, 1087, 1174, 1297
EaeI YGGCCR 2 cut(s) 3, 1407
EagI CGGCCG 1 cut(s) 1407
Eam1104I CTCTTC 1 cut(s) 550
EarI CTCTTC 1 cut(s) 550
EciI GGCGGA 1 cut(s) 1167
EclXI CGGCCG 1 cut(s) 1407
Eco105I TACGTA 1 cut(s) 1005
Eco130I CCWWGG 1 cut(s) 347
Eco52I CGGCCG 1 cut(s) 1407
Eco57I CTGAAG 1 cut(s) 786
Eco91I GGTNACC 1 cut(s) 1280
EcoO65I GGTNACC 1 cut(s) 1280
EcoRI GAATTC 2 cut(s) 153, 968
EcoRII CCWGG 1 cut(s) 8
EcoT14I CCWWGG 1 cut(s) 347
EgeI GGCGCC 1 cut(s) 672
EheI GGCGCC 1 cut(s) 672
ErhI CCWWGG 1 cut(s) 347
FaeI CATG 3 cut(s) 781, 820, 1276
FaqI GGGAC 3 cut(s) 118, 355, 998
FatI CATG 3 cut(s) 777, 816, 1272
FauI CCCGC 2 cut(s) 310, 1062
Fnu4HI GCNGC 6 cut(s) 6, 204, 238, 263, 726, 1410
FokI GGATG 4 cut(s) 770, 1363, 1381, 1399
Fsp4HI GCNGC 6 cut(s) 6, 204, 238, 263, 726, 1410
FspBI CTAG 3 cut(s) 27, 591, 774
GlaI GCGC 2 cut(s) 672, 1054
GluI GCNGC 6 cut(s) 6, 204, 238, 263, 726, 1410
HaeII RGCGCY 2 cut(s) 674, 1056
HaeIII GGCC 4 cut(s) 5, 237, 876, 1409
HapII CCGG 7 cut(s) 130, 150, 223, 232, 295, 1278, 1406
HgaI GACGC 1 cut(s) 268
HhaI GCGC 2 cut(s) 673, 1055
Hin1I GRCGYC 2 cut(s) 260, 671
Hin1II CATG 3 cut(s) 781, 820, 1276
Hin6I GCGC 2 cut(s) 671, 1053
HinP1I GCGC 2 cut(s) 671, 1053
HinfI GANTC 8 cut(s) 187, 298, 343, 609, 806, 986, 1328, 1382
HpaII CCGG 7 cut(s) 130, 150, 223, 232, 295, 1278, 1406
HphI GGTGA 3 cut(s) 139, 540, 869
Hpy166II GTNNAC 1 cut(s) 277
Hpy188I TCNGA 9 cut(s) 87, 139, 442, 702, 805, 902, 1087, 1333, 1381
Hpy188III TCNNGA 7 cut(s) 103, 191, 606, 965, 1193, 1273, 1301
Hpy8I GTNNAC 1 cut(s) 277
HpyAV CCTTC 3 cut(s) 418, 1196, 1398
HpyCH4III ACNGT 5 cut(s) 218, 928, 1114, 1286, 1363
HpyCH4IV ACGT 4 cut(s) 107, 624, 1004, 1130
HpyCH4V TGCA 4 cut(s) 319, 510, 631, 977
HpyF10VI GCNNNNNNNGC 3 cut(s) 246, 522, 677
HpyF3I CTNAG 1 cut(s) 1038
HpySE526I ACGT 4 cut(s) 107, 624, 1004, 1130
Hsp92I GRCGYC 2 cut(s) 260, 671
Hsp92II CATG 3 cut(s) 781, 820, 1276
HspAI GCGC 2 cut(s) 671, 1053
KasI GGCGCC 1 cut(s) 670
KpnI GGTACC 1 cut(s) 996
Kzo9I GATC 7 cut(s) 139, 228, 961, 1015, 1087, 1174, 1297
LguI GCTCTTC 1 cut(s) 550
LmnI GCTCC 2 cut(s) 87, 733
Lsp1109I GCAGC 2 cut(s) 190, 737
LweI GCATC 2 cut(s) 637, 1421
MaeI CTAG 3 cut(s) 27, 591, 774
MaeII ACGT 4 cut(s) 107, 624, 1004, 1130
MaeIII GTNAC 6 cut(s) 92, 145, 218, 928, 1280, 1337
MalI GATC 7 cut(s) 141, 230, 963, 1017, 1089, 1176, 1299
MboI GATC 7 cut(s) 139, 228, 961, 1015, 1087, 1174, 1297
MboII GAAGA 5 cut(s) 268, 537, 594, 1082, 1181
MflI RGATCY 1 cut(s) 139
MhlI GDGCHC 1 cut(s) 545
MluCI AATT 8 cut(s) 118, 153, 828, 846, 968, 978, 1081, 1135
Mly113I GGCGCC 1 cut(s) 671
MlyI GAGTC 4 cut(s) 196, 337, 980, 1337
MmeI TCCRAC 4 cut(s) 65, 925, 935, 1301
MnlI CCTC 9 cut(s) 254, 442, 613, 661, 830, 1006, 1342, 1366, 1402
MseI TTAA 4 cut(s) 117, 432, 576, 716
MslI CAYNNNNRTG 2 cut(s) 1164, 1399
MspA1I CMGCKG 1 cut(s) 538
MspI CCGG 7 cut(s) 130, 150, 223, 232, 295, 1278, 1406
MspR9I CCNGG 2 cut(s) 10, 233
MvaI CCWGG 1 cut(s) 10
MvnI CGCG 1 cut(s) 1302
MwoI GCNNNNNNNGC 3 cut(s) 246, 522, 677
NarI GGCGCC 1 cut(s) 671
NciI CCSGG 1 cut(s) 233
NdeII GATC 7 cut(s) 139, 228, 961, 1015, 1087, 1174, 1297
NheI GCTAGC 1 cut(s) 590
NlaIII CATG 3 cut(s) 781, 820, 1276
NlaIV GGNNCC 5 cut(s) 141, 236, 504, 672, 994
NmeAIII GCCGAG 2 cut(s) 138, 225
NmuCI GTSAC 3 cut(s) 92, 145, 218
NruI TCGCGA 1 cut(s) 1302
NspI RCATGY 1 cut(s) 781
PagI TCATGA 1 cut(s) 1272
PciSI GCTCTTC 1 cut(s) 550
PfeI GAWTC 4 cut(s) 298, 609, 806, 1382
PflFI GACNNNGTC 1 cut(s) 1327
PinAI ACCGGT 3 cut(s) 129, 222, 1277
PkrI GCNGC 6 cut(s) 7, 205, 239, 264, 727, 1411
PleI GAGTC 4 cut(s) 195, 337, 980, 1336
PluTI GGCGCC 1 cut(s) 674
PpsI GAGTC 4 cut(s) 195, 337, 980, 1336
Ppu21I YACGTR 1 cut(s) 1005
PsiI TTATAA 1 cut(s) 1164
Psp1406I AACGTT 1 cut(s) 1130
Psp6I CCWGG 1 cut(s) 8
PspEI GGTNACC 1 cut(s) 1280
PspGI CCWGG 1 cut(s) 8
PspN4I GGNNCC 5 cut(s) 141, 236, 504, 672, 994
PspPI GGNCC 1 cut(s) 235
PsuI RGATCY 1 cut(s) 139
PsyI GACNNNGTC 1 cut(s) 1327
PvuII CAGCTG 1 cut(s) 538
RruI TCGCGA 1 cut(s) 1302
RsaI GTAC 5 cut(s) 709, 994, 1007, 1185, 1314
RsaNI GTAC 5 cut(s) 708, 993, 1006, 1184, 1313
RseI CAYNNNNRTG 2 cut(s) 1164, 1399
SapI GCTCTTC 1 cut(s) 550
SaqAI TTAA 4 cut(s) 117, 432, 576, 716
SatI GCNGC 6 cut(s) 6, 204, 238, 263, 726, 1410
Sau3AI GATC 7 cut(s) 139, 228, 961, 1015, 1087, 1174, 1297
Sau96I GGNCC 1 cut(s) 235
SchI GAGTC 4 cut(s) 196, 337, 980, 1337
ScrFI CCNGG 2 cut(s) 10, 233
SduI GDGCHC 1 cut(s) 545
SfaNI GCATC 2 cut(s) 637, 1421
SfcI CTRYAG 1 cut(s) 469
SfoI GGCGCC 1 cut(s) 672
SmiMI CAYNNNNRTG 2 cut(s) 1164, 1399
SnaBI TACGTA 1 cut(s) 1005
Sse9I AATT 8 cut(s) 118, 153, 828, 846, 968, 978, 1081, 1135
SsiI CCGC 7 cut(s) 6, 238, 263, 303, 1069, 1152, 1410
SspDI GGCGCC 1 cut(s) 670
SspI AATATT 3 cut(s) 197, 1103, 1293
SspMI CTAG 3 cut(s) 27, 591, 774
StyD4I CCNGG 2 cut(s) 8, 231
StyI CCWWGG 1 cut(s) 347
TaaI ACNGT 5 cut(s) 218, 928, 1114, 1286, 1363
TaiI ACGT 4 cut(s) 110, 627, 1007, 1133
TaqI TCGA 1 cut(s) 666
TasI AATT 8 cut(s) 118, 153, 828, 846, 968, 978, 1081, 1135
TatI WGTACW 1 cut(s) 1183
TauI GCSGC 4 cut(s) 8, 240, 265, 1412
TfiI GAWTC 4 cut(s) 298, 609, 806, 1382
Tru1I TTAA 4 cut(s) 117, 432, 576, 716
Tru9I TTAA 4 cut(s) 117, 432, 576, 716
TscAI CASTG 1 cut(s) 388
TseFI GTSAC 3 cut(s) 92, 145, 218
TseI GCWGC 2 cut(s) 203, 725
Tsp45I GTSAC 3 cut(s) 92, 145, 218
TspDTI ATGAA 4 cut(s) 183, 588, 1160, 1261
TspRI CASTG 1 cut(s) 388
Tth111I GACNNNGTC 1 cut(s) 1327
XapI RAATTY 3 cut(s) 153, 968, 1135
XceI RCATGY 1 cut(s) 781
XspI CTAG 3 cut(s) 27, 591, 774
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.