Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0001552

Physical Location & Seq

Genomic Coordinates Forward (+)

10595906 .. 10599444

Gene Structure 3539 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG124100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1554 bp

ATGGCCGACTGGACGTGCAGAGCTTCTAGTAGCAACTCTACTCTCTTGCCTCTGTTACTGGTTTTCGTATTGGGTTTGGCTTGTCGGAGCTGTAACGGCTTCGGGAAGTTCGAGTTTGATTTCTACCACCGGTTGTCGGATCCCGTCACCGGAATTCTCGGCTACGATGAGCTCCCGCAAAAGGGTAGCCCTGAATATTACGCTACCATGACTCACCGGGACCGGTTGATCCGGGGCCGCCACCTCGGCGAAACGACGACCCCGCTTACTTTCGTTTACGGCAACGATACTTACCGGATTGGCGCTTTTGGACACTTGCATTATGCGAATGTTTCTGTTGGGACTCCAAGGACTTCGTATCTTGTGGCTTTGGATACAGGCAGTGATTTATTGTGGTTGCCGTGTGATTGTATCAGTTGTGTGAAGGGGTTTAATACATCAGATGGAGAGGTGGTGGATTTTGACATCTACAGCCCTAATAAATCAACAACAAGCAAAAAGGTTCCTTGCAACAGCACATATTGCGAACAACAACAGCGGTGCTCTACACCAAGTAGTGATTGTCGTTACAGTATCAACTATCTTTCTGCTAACACTTCATCCTCTGGAATCGTAGTAGAGGACGTTTTGCACTTGACTACTGATGATGCTAAACTAAAAGGTGTCGAGGCGCCGATAGCCTTTGGGTGTGGTAGGTATCAGACTGGTATATTTTTAAGTGGGGCAGCTCCCAATGGTCTATTAGGGCTTGGTATGGATGGTGTATCCATTCCTAGCATGTTAGCAAAACATGGGCTTGCTTCAGATTCTTTTTCCATGTGTTTTGGAATTGATGGAAGTGGGAGAATCAGATTTGGTGATAATGGAAGTGTAGACCAACCAGAAACACCATTCTATGTCAGAGATAAATATCCAACTTACAACATTACTGTTACTCAAATAGCCATTAATAAAAGTGTTGCTGATCTTGATTTCTATGCAATTTGGGATTCTGGTACCTCATTTACGTACCTAAATGATCCAGCTTACACCCAGATTTCCAACAGTTTCAACAGCGCCATCAAAGATTATCGGGCTACCGATAATTCTGATCTCCCTTTTGAATATTGTTATACAGTCAGTCCAAATCAAACGGTGAATTTGACATTGAAAGGCGGAAAGCATTATAATGTTATTGATCCACTTGTACTTCTTTCTGATGGGGAAGGAAATATACTGTTATATTGTCTGGGTGTTGTCAAAAGTGAAGATGTAAATATCATTGGACAAAACTTCATGACCGGTTACCGTATAATCTTTGATCGCGAGAAGATGGTAATGGGTTGGACAGAGTCAGATTGTTACAACGATGAGGAAACCTCAACTCTTCCCATCAGTCCATCCAAATCTCCCTCATCCAAATCTCCAGCCGCATCCCCCACGGTCAATCCAGAAGCCACAGTTAACCCTACTTCTGAGATACCATCAGACTCATCACCAAGTGATTCACCCAAATTGAGCTCTTTTACTTGTGCACTCATCATGGTTCTTTCTGCAATTTTTGCCATTGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004190 GO:0005575 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0016020 GO:0016787 GO:0019538 GO:0030163 GO:0031224 GO:0031225 GO:0043170 GO:0044238 GO:0044425 GO:0070001 GO:0070011 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko04138 map04138

Pfam Domains

Protein Families

TAXi_C TAXi_N

Protein Analysis

517

Amino Acids

56.31

Weight (kDa)

4.83

Isoelectric Point (pI)

38.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TAXi_N	PF14543	108 - 287	4.3e-36	Xylanase inhibitor N-terminal
Asp	PF00026	108 - 441	3.9e-23	Eukaryotic aspartyl protease
TAXi_C	PF14541	307 - 443	1.6e-12	Xylanase inhibitor C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001552)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17760 AT3G51330 AT3G51330 AT3G51330 AT3G51340 AT3G51340 AT3G51340 AT3G51340 AT3G51350
fragaria_vesca	FvH4_1g11190 FvH4_1g11190 FvH4_1g11190 FvH4_1g11190 FvH4_1g11190 FvH4_1g11190
malus_domestica	MD02G1124400.v1.1 MD02G1124500.v1.1 MD15G1238500.v1.1
prunus_persica	Prupe.7G173900_v2.0.a1
pyrus_communis	pycom02g09720
rosa_chinensis	RchiOBHm_Chr2g0098521 RchiOBHm_Chr2g0098531 RchiOBHm_Chr2g0098551 RchiOBHm_Chr2g0098601 RchiOBHm_Chr5g0032521
rosa_laevigata	RLG00000016804 RLG00000016805 RLG00000016809 RLG00000016811 RLG00000036276
rosa_roxburghii	Rroxscaffold_2G00143860 Rroxscaffold_2G00143910
rosa_rugosa	Rorug02G0073700
rosa_samantha	Rh2AG121000 Rh2AG121200 Rh2AG473700 Rh2BG124100 Rh2BG124200 Rh2BG124400 Rh2BG124600 Rh2BG124800 Rh2CG125600 Rh2CG125700 Rh2CG459400 Rh2DG126200 Rh2DG126700 Rh2DG126900 Rh5AG278400
rosa_wichuraiana	Rw0G004110 Rw2G009490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1167
Acc65I	GGTACC	1 cut(s)	995
AccB1I	GGYRCC	2 cut(s)	670, 995
AccI	GTMKAC	1 cut(s)	873
AccII	CGCG	1 cut(s)	1305
AciI	CCGC	6 cut(s)	176, 238, 263, 538, 1155, 1410
AclWI	GGATC	5 cut(s)	134, 147, 223, 1013, 1172
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	2 cut(s)	153, 1138
AcuI	CTGAAG	1 cut(s)	786
AcyI	GRCGYC	1 cut(s)	671
AdeI	CACNNNGTG	1 cut(s)	1481
AfaI	GTAC	3 cut(s)	997, 1010, 1188
AfiI	CCNNNNNNNGG	4 cut(s)	136, 149, 181, 182
AgeI	ACCGGT	3 cut(s)	129, 222, 1280
AgsI	TTSAA	3 cut(s)	1051, 1103, 1150
AjiI	CACGTC	1 cut(s)	15
AluBI	AGCT	6 cut(s)	23, 90, 172, 728, 1025, 1500
AluI	AGCT	6 cut(s)	23, 90, 172, 728, 1025, 1500
Alw21I	GWGCWC	4 cut(s)	174, 545, 1502, 1516
Alw44I	GTGCAC	1 cut(s)	1512
AlwI	GGATC	5 cut(s)	134, 147, 223, 1013, 1172
AoxI	GGCC	2 cut(s)	3, 235
ApaLI	GTGCAC	1 cut(s)	1512
ApeKI	GCWGC	1 cut(s)	725
ApoI	RAATTY	2 cut(s)	153, 1138
AseI	ATTAAT	1 cut(s)	948
AsiGI	ACCGGT	3 cut(s)	129, 222, 1280
Asp718I	GGTACC	1 cut(s)	995
AspLEI	GCGC	3 cut(s)	305, 673, 1058
AspS9I	GGNCC	2 cut(s)	220, 235
AsuC2I	CCSGG	2 cut(s)	218, 233
AsuHPI	GGTGA	6 cut(s)	139, 206, 869, 1147, 1467, 1479
AvaII	GGWCC	1 cut(s)	220
BaeGI	GKGCMC	1 cut(s)	1516
BamHI	GGATCC	1 cut(s)	139
BanI	GGYRCC	2 cut(s)	670, 995
BanII	GRGCYC	2 cut(s)	174, 1502
BarI	GAAGNNNNNNTAC	2 cut(s)	1197, 1229
Bbv12I	GWGCWC	4 cut(s)	174, 545, 1502, 1516
BbvI	GCAGC	1 cut(s)	737
BccI	CCATC	9 cut(s)	437, 752, 827, 1067, 1193, 1306, 1379, 1387, 1471
BceAI	ACGGC	3 cut(s)	112, 295, 385
BciVI	GTATCC	2 cut(s)	367, 775
BcnI	CCSGG	2 cut(s)	218, 233
BfaI	CTAG	2 cut(s)	27, 774
BfmI	CTRYAG	1 cut(s)	469
BfoI	RGCGCY	3 cut(s)	306, 674, 1059
BfuI	GTATCC	2 cut(s)	367, 775
BglI	GCCNNNNNGGC	1 cut(s)	246
BisI	GCNGC	3 cut(s)	238, 726, 1410
BlsI	GCNGC	3 cut(s)	239, 727, 1411
Bme1390I	CCNGG	2 cut(s)	218, 233
Bme18I	GGWCC	1 cut(s)	220
BmgBI	CACGTC	1 cut(s)	15
BmgT120I	GGNCC	2 cut(s)	220, 235
BmiI	GGNNCC	6 cut(s)	141, 221, 236, 504, 672, 997
BmrFI	CCNGG	2 cut(s)	218, 233
BmsI	GCATC	2 cut(s)	637, 1421
BplI	GAGNNNNNCTC	2 cut(s)	1343, 1375
BpmI	CTGGAG	1 cut(s)	1389
BpuMI	CCSGG	2 cut(s)	218, 233
BsaAI	YACGTR	1 cut(s)	1008
BsaBI	GATNNNNATC	1 cut(s)	909
BsaHI	GRCGYC	1 cut(s)	671
BsaJI	CCNNGG	4 cut(s)	232, 244, 347, 1419
BsaWI	WCCGGW	5 cut(s)	129, 149, 222, 294, 1280
BsaXI	ACNNNNNCTCC	2 cut(s)	438, 468
Bsc4I	CCNNNNNNNGG	4 cut(s)	136, 149, 181, 182
Bse118I	RCCGGY	3 cut(s)	129, 222, 1280
Bse1I	ACTGG	3 cut(s)	14, 63, 709
Bse8I	GATNNNNATC	1 cut(s)	909
BseDI	CCNNGG	4 cut(s)	232, 244, 347, 1419
BseGI	GGATG	5 cut(s)	599, 763, 1379, 1394, 1412
BseJI	GATNNNNATC	1 cut(s)	909
BseLI	CCNNNNNNNGG	4 cut(s)	136, 149, 181, 182
BseMII	CTCAG	1 cut(s)	1446
BseNI	ACTGG	3 cut(s)	14, 63, 709
BseSI	GKGCMC	1 cut(s)	1516
BseXI	GCAGC	1 cut(s)	737
BsgI	GTGCAG	1 cut(s)	37
Bsh1236I	CGCG	1 cut(s)	1305
BshFI	GGCC	2 cut(s)	5, 237
BshNI	GGYRCC	2 cut(s)	670, 995
BshTI	ACCGGT	3 cut(s)	129, 222, 1280
BsiHKAI	GWGCWC	4 cut(s)	174, 545, 1502, 1516
BsiSI	CCGG	7 cut(s)	130, 150, 217, 223, 232, 295, 1281
BslFI	GGGAC	2 cut(s)	233, 355
BslI	CCNNNNNNNGG	4 cut(s)	136, 149, 181, 182
BsmFI	GGGAC	2 cut(s)	233, 355
BsnI	GGCC	2 cut(s)	5, 237
Bsp1286I	GDGCHC	4 cut(s)	174, 545, 1502, 1516
Bsp143I	GATC	7 cut(s)	139, 228, 964, 1018, 1090, 1177, 1300
Bsp68I	TCGCGA	1 cut(s)	1305
BspACI	CCGC	6 cut(s)	176, 238, 263, 538, 1155, 1410
BspANI	GGCC	2 cut(s)	5, 237
BspCNI	CTCAG	1 cut(s)	1447
BspFNI	CGCG	1 cut(s)	1305
BspHI	TCATGA	1 cut(s)	1275
BspLI	GGNNCC	6 cut(s)	141, 221, 236, 504, 672, 997
BspPI	GGATC	5 cut(s)	134, 147, 223, 1013, 1172
BspT107I	GGYRCC	2 cut(s)	670, 995
BsrFI	RCCGGY	3 cut(s)	129, 222, 1280
BsrI	ACTGG	3 cut(s)	14, 63, 709
BssAI	RCCGGY	3 cut(s)	129, 222, 1280
BssECI	CCNNGG	4 cut(s)	232, 244, 347, 1419
BssMI	GATC	7 cut(s)	139, 228, 964, 1018, 1090, 1177, 1300
BssNI	GRCGYC	1 cut(s)	671
BssT1I	CCWWGG	1 cut(s)	347
Bst4CI	ACNGT	9 cut(s)	572, 931, 1046, 1117, 1135, 1218, 1289, 1423, 1441
Bst6I	CTCTTC	1 cut(s)	1371
BstACI	GRCGYC	1 cut(s)	671
BstAPI	GCANNNNNTGC	2 cut(s)	522, 1541
BstBAI	YACGTR	1 cut(s)	1008
BstC8I	GCNNGC	1 cut(s)	798
BstDEI	CTNAG	1 cut(s)	1455
BstDSI	CCRYGG	1 cut(s)	1419
BstEII	GGTNACC	1 cut(s)	1283
BstF5I	GGATG	5 cut(s)	599, 763, 1379, 1394, 1412
BstFNI	CGCG	1 cut(s)	1305
BstH2I	RGCGCY	3 cut(s)	306, 674, 1059
BstHHI	GCGC	3 cut(s)	305, 673, 1058
BstKTI	GATC	7 cut(s)	142, 231, 967, 1021, 1093, 1180, 1303
BstMBI	GATC	7 cut(s)	139, 228, 964, 1018, 1090, 1177, 1300
BstMWI	GCNNNNNNNGC	5 cut(s)	96, 246, 522, 677, 1541
BstNSI	RCATGY	1 cut(s)	781
BstPI	GGTNACC	1 cut(s)	1283
BstSCI	CCNGG	2 cut(s)	216, 231
BstSFI	CTRYAG	1 cut(s)	469
BstSLI	GKGCMC	1 cut(s)	1516
BstSNI	TACGTA	1 cut(s)	1008
BstUI	CGCG	1 cut(s)	1305
BstV1I	GCAGC	1 cut(s)	737
BstX2I	RGATCY	1 cut(s)	139
BstYI	RGATCY	1 cut(s)	139
BsuI	GTATCC	2 cut(s)	367, 775
BsuRI	GGCC	2 cut(s)	5, 237
BtgI	CCRYGG	1 cut(s)	1419
BtrI	CACGTC	1 cut(s)	15
BtsCI	GGATG	5 cut(s)	599, 763, 1379, 1394, 1412
BtsI	GCAGTG	1 cut(s)	388
BtsIMutI	CAGTG	1 cut(s)	388
BtuMI	TCGCGA	1 cut(s)	1305
Cac8I	GCNNGC	1 cut(s)	798
CciI	TCATGA	1 cut(s)	1275
CfoI	GCGC	3 cut(s)	305, 673, 1058
Cfr10I	RCCGGY	3 cut(s)	129, 222, 1280
Cfr13I	GGNCC	2 cut(s)	220, 235
Csp6I	GTAC	3 cut(s)	996, 1009, 1187
CspAI	ACCGGT	3 cut(s)	129, 222, 1280
CviAII	CATG	6 cut(s)	208, 778, 791, 817, 1276, 1522
CviQI	GTAC	3 cut(s)	996, 1009, 1187
DdeI	CTNAG	1 cut(s)	1455
DinI	GGCGCC	1 cut(s)	672
DpnI	GATC	7 cut(s)	141, 230, 966, 1020, 1092, 1179, 1302
DpnII	GATC	7 cut(s)	139, 228, 964, 1018, 1090, 1177, 1300
DraIII	CACNNNGTG	1 cut(s)	1481
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	1 cut(s)	1371
EarI	CTCTTC	1 cut(s)	1371
EciI	GGCGGA	1 cut(s)	1170
Ecl136II	GAGCTC	2 cut(s)	172, 1500
Eco105I	TACGTA	1 cut(s)	1008
Eco130I	CCWWGG	1 cut(s)	347
Eco24I	GRGCYC	2 cut(s)	174, 1502
Eco47I	GGWCC	1 cut(s)	220
Eco53kI	GAGCTC	2 cut(s)	172, 1500
Eco57I	CTGAAG	1 cut(s)	786
Eco91I	GGTNACC	1 cut(s)	1283
EcoICRI	GAGCTC	2 cut(s)	172, 1500
EcoO65I	GGTNACC	1 cut(s)	1283
EcoRI	GAATTC	1 cut(s)	153
EcoT14I	CCWWGG	1 cut(s)	347
EcoT38I	GRGCYC	2 cut(s)	174, 1502
EgeI	GGCGCC	1 cut(s)	672
EheI	GGCGCC	1 cut(s)	672
ErhI	CCWWGG	1 cut(s)	347
FaeI	CATG	6 cut(s)	211, 781, 794, 820, 1279, 1525
FaqI	GGGAC	2 cut(s)	233, 355
FatI	CATG	6 cut(s)	207, 777, 790, 816, 1275, 1521
FauI	CCCGC	2 cut(s)	183, 270
FblI	GTMKAC	1 cut(s)	873
Fnu4HI	GCNGC	3 cut(s)	238, 726, 1410
FokI	GGATG	5 cut(s)	586, 770, 1366, 1381, 1399
FriOI	GRGCYC	2 cut(s)	174, 1502
Fsp4HI	GCNGC	3 cut(s)	238, 726, 1410
FspBI	CTAG	2 cut(s)	27, 774
GlaI	GCGC	3 cut(s)	304, 672, 1057
GluI	GCNGC	3 cut(s)	238, 726, 1410
GsuI	CTGGAG	1 cut(s)	1389
HaeII	RGCGCY	3 cut(s)	306, 674, 1059
HaeIII	GGCC	2 cut(s)	5, 237
HapII	CCGG	7 cut(s)	130, 150, 217, 223, 232, 295, 1281
HhaI	GCGC	3 cut(s)	305, 673, 1058
Hin1I	GRCGYC	1 cut(s)	671
Hin1II	CATG	6 cut(s)	211, 781, 794, 820, 1279, 1525
Hin6I	GCGC	3 cut(s)	303, 671, 1056
HinP1I	GCGC	3 cut(s)	303, 671, 1056
HincII	GTYRAC	1 cut(s)	1444
HindII	GTYRAC	1 cut(s)	1444
HinfI	GANTC	9 cut(s)	211, 343, 609, 806, 846, 989, 1331, 1469, 1484
HpaI	GTTAAC	1 cut(s)	1444
HpaII	CCGG	7 cut(s)	130, 150, 217, 223, 232, 295, 1281
HphI	GGTGA	6 cut(s)	139, 206, 869, 1147, 1467, 1479
Hpy166II	GTNNAC	4 cut(s)	277, 874, 1444, 1514
Hpy188III	TCNNGA	6 cut(s)	103, 606, 968, 1276, 1304, 1430
Hpy8I	GTNNAC	4 cut(s)	277, 874, 1444, 1514
Hpy99I	CGWCG	1 cut(s)	259
HpyAV	CCTTC	2 cut(s)	418, 1199
HpyCH4III	ACNGT	9 cut(s)	572, 931, 1046, 1117, 1135, 1218, 1289, 1423, 1441
HpyCH4IV	ACGT	3 cut(s)	14, 624, 1007
HpyCH4V	TGCA	7 cut(s)	18, 319, 510, 631, 980, 1514, 1535
HpyF10VI	GCNNNNNNNGC	5 cut(s)	96, 246, 522, 677, 1541
HpyF3I	CTNAG	1 cut(s)	1455
HpySE526I	ACGT	3 cut(s)	14, 624, 1007
Hsp92I	GRCGYC	1 cut(s)	671
Hsp92II	CATG	6 cut(s)	211, 781, 794, 820, 1279, 1525
HspAI	GCGC	3 cut(s)	303, 671, 1056
KasI	GGCGCC	1 cut(s)	670
KpnI	GGTACC	1 cut(s)	999
KspAI	GTTAAC	1 cut(s)	1444
Kzo9I	GATC	7 cut(s)	139, 228, 964, 1018, 1090, 1177, 1300
LmnI	GCTCC	3 cut(s)	87, 177, 733
Lsp1109I	GCAGC	1 cut(s)	737
LweI	GCATC	2 cut(s)	637, 1421
MaeI	CTAG	2 cut(s)	27, 774
MaeII	ACGT	3 cut(s)	14, 624, 1007
MaeIII	GTNAC	7 cut(s)	54, 92, 145, 566, 931, 1283, 1340
MalI	GATC	7 cut(s)	141, 230, 966, 1020, 1092, 1179, 1302
MboI	GATC	7 cut(s)	139, 228, 964, 1018, 1090, 1177, 1300
MboII	GAAGA	3 cut(s)	1259, 1321, 1358
MflI	RGATCY	1 cut(s)	139
MhlI	GDGCHC	4 cut(s)	174, 545, 1502, 1516
MluCI	AATT	7 cut(s)	153, 828, 981, 1084, 1138, 1493, 1536
Mly113I	GGCGCC	1 cut(s)	671
MlyI	GAGTC	4 cut(s)	205, 337, 1340, 1463
MmeI	TCCRAC	5 cut(s)	65, 117, 938, 1065, 1304
MseI	TTAA	5 cut(s)	432, 716, 948, 1443, 1552
MslI	CAYNNNNRTG	1 cut(s)	1167
MspA1I	CMGCKG	1 cut(s)	538
MspI	CCGG	7 cut(s)	130, 150, 217, 223, 232, 295, 1281
MspR9I	CCNGG	2 cut(s)	218, 233
MvnI	CGCG	1 cut(s)	1305
MwoI	GCNNNNNNNGC	5 cut(s)	96, 246, 522, 677, 1541
NarI	GGCGCC	1 cut(s)	671
NciI	CCSGG	2 cut(s)	218, 233
NdeII	GATC	7 cut(s)	139, 228, 964, 1018, 1090, 1177, 1300
NlaIII	CATG	6 cut(s)	211, 781, 794, 820, 1279, 1525
NlaIV	GGNNCC	6 cut(s)	141, 221, 236, 504, 672, 997
NmeAIII	GCCGAG	2 cut(s)	138, 225
NmuCI	GTSAC	1 cut(s)	145
NruI	TCGCGA	1 cut(s)	1305
NspI	RCATGY	1 cut(s)	781
PagI	TCATGA	1 cut(s)	1275
PcsI	WCGNNNNNNNCGW	1 cut(s)	108
PfeI	GAWTC	5 cut(s)	609, 806, 846, 989, 1484
PflFI	GACNNNGTC	1 cut(s)	1330
PinAI	ACCGGT	3 cut(s)	129, 222, 1280
PkrI	GCNGC	3 cut(s)	239, 727, 1411
PleI	GAGTC	4 cut(s)	205, 337, 1339, 1463
PluTI	GGCGCC	1 cut(s)	674
PpsI	GAGTC	4 cut(s)	205, 337, 1339, 1463
Ppu21I	YACGTR	1 cut(s)	1008
PshBI	ATTAAT	1 cut(s)	948
PsiI	TTATAA	1 cut(s)	1167
Psp124BI	GAGCTC	2 cut(s)	174, 1502
PspEI	GGTNACC	1 cut(s)	1283
PspN4I	GGNNCC	6 cut(s)	141, 221, 236, 504, 672, 997
PspPI	GGNCC	2 cut(s)	220, 235
PsuI	RGATCY	1 cut(s)	139
PsyI	GACNNNGTC	1 cut(s)	1330
RruI	TCGCGA	1 cut(s)	1305
RsaI	GTAC	3 cut(s)	997, 1010, 1188
RsaNI	GTAC	3 cut(s)	996, 1009, 1187
RseI	CAYNNNNRTG	1 cut(s)	1167
SacI	GAGCTC	2 cut(s)	174, 1502
SaqAI	TTAA	5 cut(s)	432, 716, 948, 1443, 1552
SatI	GCNGC	3 cut(s)	238, 726, 1410
Sau3AI	GATC	7 cut(s)	139, 228, 964, 1018, 1090, 1177, 1300
Sau96I	GGNCC	2 cut(s)	220, 235
SchI	GAGTC	4 cut(s)	205, 337, 1340, 1463
ScrFI	CCNGG	2 cut(s)	218, 233
SduI	GDGCHC	4 cut(s)	174, 545, 1502, 1516
SfaNI	GCATC	2 cut(s)	637, 1421
SfcI	CTRYAG	1 cut(s)	469
SfoI	GGCGCC	1 cut(s)	672
SinI	GGWCC	1 cut(s)	220
SmiMI	CAYNNNNRTG	1 cut(s)	1167
SnaBI	TACGTA	1 cut(s)	1008
Sse9I	AATT	7 cut(s)	153, 828, 981, 1084, 1138, 1493, 1536
SsiI	CCGC	6 cut(s)	176, 238, 263, 538, 1155, 1410
SspDI	GGCGCC	1 cut(s)	670
SspI	AATATT	2 cut(s)	197, 1106
SspMI	CTAG	2 cut(s)	27, 774
SstI	GAGCTC	2 cut(s)	174, 1502
StyD4I	CCNGG	2 cut(s)	216, 231
StyI	CCWWGG	1 cut(s)	347
TaaI	ACNGT	9 cut(s)	572, 931, 1046, 1117, 1135, 1218, 1289, 1423, 1441
TaiI	ACGT	3 cut(s)	17, 627, 1010
TaqI	TCGA	2 cut(s)	111, 666
TasI	AATT	7 cut(s)	153, 828, 981, 1084, 1138, 1493, 1536
TatI	WGTACW	1 cut(s)	1186
TauI	GCSGC	2 cut(s)	240, 1412
TfiI	GAWTC	5 cut(s)	609, 806, 846, 989, 1484
Tru1I	TTAA	5 cut(s)	432, 716, 948, 1443, 1552
Tru9I	TTAA	5 cut(s)	432, 716, 948, 1443, 1552
TscAI	CASTG	1 cut(s)	388
TseFI	GTSAC	1 cut(s)	145
TseI	GCWGC	1 cut(s)	725
Tsp45I	GTSAC	1 cut(s)	145
TspDTI	ATGAA	2 cut(s)	588, 1264
TspRI	CASTG	1 cut(s)	388
Tth111I	GACNNNGTC	1 cut(s)	1330
VneI	GTGCAC	1 cut(s)	1512
VpaK11BI	GGWCC	1 cut(s)	220
VspI	ATTAAT	1 cut(s)	948
XapI	RAATTY	2 cut(s)	153, 1138
XceI	RCATGY	1 cut(s)	781
XmiI	GTMKAC	1 cut(s)	873
XspI	CTAG	2 cut(s)	27, 774

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.