Rh2BG124400

Belongs to the peptidase A1 family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Forward (+)
10622710 .. 10626094
3385 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG124400.1

Sequence Viewer

Length: 1362 bp
ATGGCCGCCTGGACTGGCAGAGCTTCTAGTAGCAACTCTACTCTCTTGCCTCTGTTACTGGTTTTCGTATTGGGTTTGGCTTGTCGGAGCTGTAACGGCTTCGGGAAGTTCGAGTTTGATTTCTACCACCGGTTGTCGGATCCCGTCACCGGAATTCTCGGCTACGATGAGCTCCCGCAAAAGGGTAGCCCTGAATATTACGCTACCATGACTCACCGGGACCGGTTGATCCGGGGCCGCCACCTCGGCGAAACGACGACCCCGCTTACTTTCGTTTACGGCAACGATACTTACCGGATTGGCGCTTTTGGACACTTGCATTATGCGAATGTTTCCGTTGGGACTCCAAGGACTTCGTATCTTGTGGCTTTGGATACAGGCAGTGATTTATTGTGGTTGCCGTGTGATTGTATCAGTTGTGTGAAGGGGTTTAATACACCAGATGGAGAGTTGTATTTTGACATTTACAGCCCGAATAAATCAACAACAAGCAAAAAGGTTCCTTGCAACAGCACATATTGTGAAAAACAGCAGCAGTGCTCTTCACCAAGTAGTGATTGTCGTTACAGTATTACCTATCTTTATGCTAACACTTCATCTTCCGGAATCGTAGTAGAGGATGTTTTGCACTTGATTACTGATGATGCTACACTAAAAGGTGTAGAGGCACCGATAGCTTTTGGGTGTGGTAAGATTCAGACTGGTATATTTTTAAATGGGGCAGCTCCCAATGGTCTATTAGGGCTTGGTATGGATGATGTATCCATTCCTAGCATGTTAGCAAAACAGGGGCTTGCTTCAAATTCCTTTTCCATGTGTTTTGGAATTAACGGAAGTGGTAGGATCAGATTTGGTGATAATGGAAGTGTAGACCAACCAGAAACACCATTCTATGTCGGAGATAAATATCCAACTTACAACATTACAGTTAAACAAATAGCCGTTGGAAAAAGTGTCGCTGATCTTGAATTCTATGCAATTTGGGACTCTGGTACCTCATTTACGCACCTAAATGATCCATCTTACACTCAGATTTCTAATAGTTTCAACAGCGCCATTAAAGATAAGCGGTTTACAGATTCTGATCTCCCTTTTGAATATTGTTATACAGTCAGACCAAATCAAACGTTGGATTTGACAATGAAAGGCGGAAAGCAATATAATGTTATTCATCCACATGTAGTTCTTTTTGATGGGGAAGGAAATATACCGTTCTATTGTCTGGGTGTTGTCAAAAGTGAAGATGTAAATATAATTGGGCGTGAGTATCTCTCTCTACACACTGCTGATCTCACAATTCATTTTGCATGCTCTGCTGTCATTCTGGAATGCTTACTTTCTATACCATTAATGCTCCTTTAA

Protein Analysis

453

Amino Acids

49.65

Weight (kDa)

5.44

Isoelectric Point (pI)

35.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TAXi_N PF14543 108 - 286 2e-37 Xylanase inhibitor N-terminal
Asp PF00026 108 - 424 1.8e-19 Eukaryotic aspartyl protease
TAXi_C PF14541 306 - 420 7.8e-09 Xylanase inhibitor C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 992
AccB1I GGYRCC 2 cut(s) 667, 992
AccI GTMKAC 1 cut(s) 870
AccIII TCCGGA 1 cut(s) 602
AciI CCGC 6 cut(s) 6, 176, 238, 263, 1069, 1149
AclI AACGTT 1 cut(s) 1127
AclWI GGATC 5 cut(s) 134, 147, 223, 851, 1010
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 3 cut(s) 153, 802, 968
AfaI GTAC 1 cut(s) 994
AfiI CCNNNNNNNGG 4 cut(s) 136, 149, 181, 182
AflIII ACRYGT 1 cut(s) 1177
AgeI ACCGGT 2 cut(s) 129, 222
AgsI TTSAA 4 cut(s) 801, 968, 1048, 1097
AjnI CCWGG 1 cut(s) 8
AluBI AGCT 5 cut(s) 23, 90, 172, 677, 725
AluI AGCT 5 cut(s) 23, 90, 172, 677, 725
Alw21I GWGCWC 2 cut(s) 174, 542
AlwI GGATC 5 cut(s) 134, 147, 223, 851, 1010
AlwNI CAGNNNCTG 1 cut(s) 1082
Aor13HI TCCGGA 1 cut(s) 602
AoxI GGCC 2 cut(s) 3, 235
ApeKI GCWGC 2 cut(s) 532, 722
ApoI RAATTY 3 cut(s) 153, 802, 968
AseI ATTAAT 1 cut(s) 1349
AsiGI ACCGGT 2 cut(s) 129, 222
Asp718I GGTACC 1 cut(s) 992
AspLEI GCGC 2 cut(s) 305, 1055
AspS9I GGNCC 2 cut(s) 220, 235
AsuC2I CCSGG 2 cut(s) 218, 233
AsuHPI GGTGA 4 cut(s) 139, 206, 537, 866
AvaII GGWCC 1 cut(s) 220
BaeI ACNNNNGTAYC 2 cut(s) 976, 1009
BamHI GGATCC 1 cut(s) 139
BanI GGYRCC 2 cut(s) 667, 992
BanII GRGCYC 1 cut(s) 174
BarI GAAGNNNNNNTAC 2 cut(s) 1191, 1223
Bbv12I GWGCWC 2 cut(s) 174, 542
BbvI GCAGC 2 cut(s) 544, 734
BccI CCATC 3 cut(s) 437, 1027, 1187
BceAI ACGGC 4 cut(s) 112, 295, 385, 926
BciT130I CCWGG 1 cut(s) 10
BciVI GTATCC 2 cut(s) 367, 772
BcnI CCSGG 2 cut(s) 218, 233
BfaI CTAG 2 cut(s) 27, 771
BfoI RGCGCY 2 cut(s) 306, 1056
BfuI GTATCC 2 cut(s) 367, 772
BglI GCCNNNNNGGC 1 cut(s) 246
BisI GCNGC 4 cut(s) 6, 238, 533, 723
BlsI GCNGC 4 cut(s) 7, 239, 534, 724
Bme1390I CCNGG 3 cut(s) 10, 218, 233
Bme18I GGWCC 1 cut(s) 220
BmgT120I GGNCC 2 cut(s) 220, 235
BmiI GGNNCC 6 cut(s) 141, 221, 236, 501, 669, 994
BmrFI CCNGG 3 cut(s) 10, 218, 233
BmsI GCATC 1 cut(s) 634
BplI GAGNNNNNCTC 2 cut(s) 1256, 1288
BpuMI CCSGG 2 cut(s) 218, 233
BsaBI GATNNNNATC 2 cut(s) 906, 1083
BsaJI CCNNGG 3 cut(s) 232, 244, 347
BsaWI WCCGGW 5 cut(s) 129, 149, 222, 294, 602
Bsc4I CCNNNNNNNGG 4 cut(s) 136, 149, 181, 182
Bse118I RCCGGY 2 cut(s) 129, 222
Bse1I ACTGG 3 cut(s) 19, 63, 706
Bse8I GATNNNNATC 2 cut(s) 906, 1083
BseAI TCCGGA 1 cut(s) 602
BseBI CCWGG 1 cut(s) 10
BseDI CCNNGG 3 cut(s) 232, 244, 347
BseGI GGATG 3 cut(s) 625, 760, 1171
BseJI GATNNNNATC 2 cut(s) 906, 1083
BseLI CCNNNNNNNGG 4 cut(s) 136, 149, 181, 182
BseMII CTCAG 1 cut(s) 1043
BseNI ACTGG 3 cut(s) 19, 63, 706
BseXI GCAGC 2 cut(s) 544, 734
BshFI GGCC 2 cut(s) 5, 237
BshNI GGYRCC 2 cut(s) 667, 992
BshTI ACCGGT 2 cut(s) 129, 222
BsiHKAI GWGCWC 2 cut(s) 174, 542
BsiSI CCGG 7 cut(s) 130, 150, 217, 223, 232, 295, 603
BslFI GGGAC 3 cut(s) 233, 355, 998
BslI CCNNNNNNNGG 4 cut(s) 136, 149, 181, 182
BsmFI GGGAC 3 cut(s) 233, 355, 998
BsmI GAATGC 1 cut(s) 1334
BsnI GGCC 2 cut(s) 5, 237
Bsp1286I GDGCHC 2 cut(s) 174, 542
Bsp13I TCCGGA 1 cut(s) 602
Bsp143I GATC 7 cut(s) 139, 228, 843, 961, 1015, 1084, 1288
BspACI CCGC 6 cut(s) 6, 176, 238, 263, 1069, 1149
BspANI GGCC 2 cut(s) 5, 237
BspCNI CTCAG 1 cut(s) 1042
BspEI TCCGGA 1 cut(s) 602
BspLI GGNNCC 6 cut(s) 141, 221, 236, 501, 669, 994
BspPI GGATC 5 cut(s) 134, 147, 223, 851, 1010
BspQI GCTCTTC 1 cut(s) 547
BspT107I GGYRCC 2 cut(s) 667, 992
BsrFI RCCGGY 2 cut(s) 129, 222
BsrI ACTGG 3 cut(s) 19, 63, 706
BssAI RCCGGY 2 cut(s) 129, 222
BssECI CCNNGG 3 cut(s) 232, 244, 347
BssMI GATC 7 cut(s) 139, 228, 843, 961, 1015, 1084, 1288
BssT1I CCWWGG 1 cut(s) 347
Bst2UI CCWGG 1 cut(s) 10
Bst4CI ACNGT 4 cut(s) 569, 928, 1111, 1212
Bst6I CTCTTC 1 cut(s) 547
BstAPI GCANNNNNTGC 1 cut(s) 1313
BstC8I GCNNGC 2 cut(s) 795, 1309
BstDEI CTNAG 1 cut(s) 1029
BstF5I GGATG 3 cut(s) 625, 760, 1171
BstH2I RGCGCY 2 cut(s) 306, 1056
BstHHI GCGC 2 cut(s) 305, 1055
BstKTI GATC 7 cut(s) 142, 231, 846, 964, 1018, 1087, 1291
BstMBI GATC 7 cut(s) 139, 228, 843, 961, 1015, 1084, 1288
BstMWI GCNNNNNNNGC 4 cut(s) 96, 246, 674, 1313
BstNI CCWGG 1 cut(s) 10
BstNSI RCATGY 3 cut(s) 778, 1181, 1311
BstSCI CCNGG 3 cut(s) 8, 216, 231
BstV1I GCAGC 2 cut(s) 544, 734
BstX2I RGATCY 1 cut(s) 139
BstYI RGATCY 1 cut(s) 139
BsuI GTATCC 2 cut(s) 367, 772
BsuRI GGCC 2 cut(s) 5, 237
BtsCI GGATG 3 cut(s) 625, 760, 1171
BtsI GCAGTG 3 cut(s) 388, 542, 1281
BtsIMutI CAGTG 3 cut(s) 388, 542, 1281
Cac8I GCNNGC 2 cut(s) 795, 1309
CaiI CAGNNNCTG 1 cut(s) 1082
CfoI GCGC 2 cut(s) 305, 1055
Cfr10I RCCGGY 2 cut(s) 129, 222
Cfr13I GGNCC 2 cut(s) 220, 235
Csp6I GTAC 1 cut(s) 993
CspAI ACCGGT 2 cut(s) 129, 222
CviAII CATG 5 cut(s) 208, 775, 814, 1178, 1308
CviQI GTAC 1 cut(s) 993
DdeI CTNAG 1 cut(s) 1029
DpnI GATC 7 cut(s) 141, 230, 845, 963, 1017, 1086, 1290
DpnII GATC 7 cut(s) 139, 228, 843, 961, 1015, 1084, 1288
DraI TTTAAA 1 cut(s) 714
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 1 cut(s) 547
EarI CTCTTC 1 cut(s) 547
EciI GGCGGA 1 cut(s) 1164
Ecl136II GAGCTC 1 cut(s) 172
Eco130I CCWWGG 1 cut(s) 347
Eco24I GRGCYC 1 cut(s) 174
Eco47I GGWCC 1 cut(s) 220
Eco53kI GAGCTC 1 cut(s) 172
EcoICRI GAGCTC 1 cut(s) 172
EcoRI GAATTC 2 cut(s) 153, 968
EcoRII CCWGG 1 cut(s) 8
EcoT14I CCWWGG 1 cut(s) 347
EcoT38I GRGCYC 1 cut(s) 174
ErhI CCWWGG 1 cut(s) 347
FaeI CATG 5 cut(s) 211, 778, 817, 1181, 1311
FaqI GGGAC 3 cut(s) 233, 355, 998
FatI CATG 5 cut(s) 207, 774, 813, 1177, 1307
FauI CCCGC 2 cut(s) 183, 270
FblI GTMKAC 1 cut(s) 870
Fnu4HI GCNGC 4 cut(s) 6, 238, 533, 723
FokI GGATG 3 cut(s) 632, 767, 1158
FriOI GRGCYC 1 cut(s) 174
Fsp4HI GCNGC 4 cut(s) 6, 238, 533, 723
FspBI CTAG 2 cut(s) 27, 771
GlaI GCGC 2 cut(s) 304, 1054
GluI GCNGC 4 cut(s) 6, 238, 533, 723
HaeII RGCGCY 2 cut(s) 306, 1056
HaeIII GGCC 2 cut(s) 5, 237
HapII CCGG 7 cut(s) 130, 150, 217, 223, 232, 295, 603
HhaI GCGC 2 cut(s) 305, 1055
Hin1II CATG 5 cut(s) 211, 778, 817, 1181, 1311
Hin6I GCGC 2 cut(s) 303, 1053
HinP1I GCGC 2 cut(s) 303, 1053
HinfI GANTC 6 cut(s) 211, 343, 606, 694, 986, 1079
HpaII CCGG 7 cut(s) 130, 150, 217, 223, 232, 295, 603
HphI GGTGA 4 cut(s) 139, 206, 537, 866
Hpy166II GTNNAC 3 cut(s) 277, 871, 1074
Hpy188I TCNGA 8 cut(s) 87, 139, 699, 848, 899, 1032, 1084, 1115
Hpy188III TCNNGA 4 cut(s) 103, 603, 965, 1325
Hpy8I GTNNAC 3 cut(s) 277, 871, 1074
Hpy99I CGWCG 1 cut(s) 259
HpyAV CCTTC 2 cut(s) 418, 1193
HpyCH4III ACNGT 4 cut(s) 569, 928, 1111, 1212
HpyCH4IV ACGT 1 cut(s) 1127
HpyCH4V TGCA 5 cut(s) 319, 507, 628, 977, 1307
HpyF10VI GCNNNNNNNGC 4 cut(s) 96, 246, 674, 1313
HpyF3I CTNAG 1 cut(s) 1029
HpySE526I ACGT 1 cut(s) 1127
Hsp92II CATG 5 cut(s) 211, 778, 817, 1181, 1311
HspAI GCGC 2 cut(s) 303, 1053
Kpn2I TCCGGA 1 cut(s) 602
KpnI GGTACC 1 cut(s) 996
Kzo9I GATC 7 cut(s) 139, 228, 843, 961, 1015, 1084, 1288
LguI GCTCTTC 1 cut(s) 547
LmnI GCTCC 4 cut(s) 87, 177, 730, 1359
Lsp1109I GCAGC 2 cut(s) 544, 734
LweI GCATC 1 cut(s) 634
MaeI CTAG 2 cut(s) 27, 771
MaeII ACGT 1 cut(s) 1127
MaeIII GTNAC 4 cut(s) 54, 92, 145, 563
MalI GATC 7 cut(s) 141, 230, 845, 963, 1017, 1086, 1290
MboI GATC 7 cut(s) 139, 228, 843, 961, 1015, 1084, 1288
MboII GAAGA 3 cut(s) 534, 591, 1253
MflI RGATCY 1 cut(s) 139
MhlI GDGCHC 2 cut(s) 174, 542
MluCI AATT 7 cut(s) 153, 802, 825, 968, 978, 1254, 1296
MlyI GAGTC 3 cut(s) 205, 337, 980
MmeI TCCRAC 6 cut(s) 65, 117, 877, 925, 935, 1110
MnlI CCTC 5 cut(s) 60, 254, 610, 658, 1006
MroI TCCGGA 1 cut(s) 602
MseI TTAA 7 cut(s) 432, 713, 828, 930, 1059, 1349, 1360
MslI CAYNNNNRTG 2 cut(s) 1011, 1176
MspI CCGG 7 cut(s) 130, 150, 217, 223, 232, 295, 603
MspR9I CCNGG 3 cut(s) 10, 218, 233
Mva1269I GAATGC 1 cut(s) 1334
MvaI CCWGG 1 cut(s) 10
MwoI GCNNNNNNNGC 4 cut(s) 96, 246, 674, 1313
NciI CCSGG 2 cut(s) 218, 233
NdeII GATC 7 cut(s) 139, 228, 843, 961, 1015, 1084, 1288
NlaIII CATG 5 cut(s) 211, 778, 817, 1181, 1311
NlaIV GGNNCC 6 cut(s) 141, 221, 236, 501, 669, 994
NmeAIII GCCGAG 2 cut(s) 138, 225
NmuCI GTSAC 1 cut(s) 145
NspI RCATGY 3 cut(s) 778, 1181, 1311
PaeI GCATGC 1 cut(s) 1311
PciI ACATGT 1 cut(s) 1177
PciSI GCTCTTC 1 cut(s) 547
PcsI WCGNNNNNNNCGW 1 cut(s) 108
PctI GAATGC 1 cut(s) 1334
PfeI GAWTC 3 cut(s) 606, 694, 1079
PinAI ACCGGT 2 cut(s) 129, 222
PkrI GCNGC 4 cut(s) 7, 239, 534, 724
PleI GAGTC 3 cut(s) 205, 337, 980
PpsI GAGTC 3 cut(s) 205, 337, 980
PscI ACATGT 1 cut(s) 1177
PshBI ATTAAT 1 cut(s) 1349
Psp124BI GAGCTC 1 cut(s) 174
Psp1406I AACGTT 1 cut(s) 1127
Psp6I CCWGG 1 cut(s) 8
PspGI CCWGG 1 cut(s) 8
PspN4I GGNNCC 6 cut(s) 141, 221, 236, 501, 669, 994
PspPI GGNCC 2 cut(s) 220, 235
PstNI CAGNNNCTG 1 cut(s) 1082
PsuI RGATCY 1 cut(s) 139
RsaI GTAC 1 cut(s) 994
RsaNI GTAC 1 cut(s) 993
RseI CAYNNNNRTG 2 cut(s) 1011, 1176
SacI GAGCTC 1 cut(s) 174
SapI GCTCTTC 1 cut(s) 547
SaqAI TTAA 7 cut(s) 432, 713, 828, 930, 1059, 1349, 1360
SatI GCNGC 4 cut(s) 6, 238, 533, 723
Sau3AI GATC 7 cut(s) 139, 228, 843, 961, 1015, 1084, 1288
Sau96I GGNCC 2 cut(s) 220, 235
SchI GAGTC 3 cut(s) 205, 337, 980
ScrFI CCNGG 3 cut(s) 10, 218, 233
SduI GDGCHC 2 cut(s) 174, 542
SfaNI GCATC 1 cut(s) 634
SinI GGWCC 1 cut(s) 220
SmiMI CAYNNNNRTG 2 cut(s) 1011, 1176
SphI GCATGC 1 cut(s) 1311
Sse9I AATT 7 cut(s) 153, 802, 825, 968, 978, 1254, 1296
SsiI CCGC 6 cut(s) 6, 176, 238, 263, 1069, 1149
SspI AATATT 2 cut(s) 197, 1100
SspMI CTAG 2 cut(s) 27, 771
SstI GAGCTC 1 cut(s) 174
StyD4I CCNGG 3 cut(s) 8, 216, 231
StyI CCWWGG 1 cut(s) 347
TaaI ACNGT 4 cut(s) 569, 928, 1111, 1212
TaiI ACGT 1 cut(s) 1130
TaqI TCGA 1 cut(s) 111
TasI AATT 7 cut(s) 153, 802, 825, 968, 978, 1254, 1296
TauI GCSGC 2 cut(s) 8, 240
TfiI GAWTC 3 cut(s) 606, 694, 1079
Tru1I TTAA 7 cut(s) 432, 713, 828, 930, 1059, 1349, 1360
Tru9I TTAA 7 cut(s) 432, 713, 828, 930, 1059, 1349, 1360
TscAI CASTG 3 cut(s) 388, 542, 1288
TseFI GTSAC 1 cut(s) 145
TseI GCWGC 2 cut(s) 532, 722
Tsp45I GTSAC 1 cut(s) 145
TspDTI ATGAA 4 cut(s) 585, 1157, 1160, 1289
TspGWI ACGGA 2 cut(s) 325, 846
TspRI CASTG 3 cut(s) 388, 542, 1288
VpaK11BI GGWCC 1 cut(s) 220
VspI ATTAAT 1 cut(s) 1349
XapI RAATTY 3 cut(s) 153, 802, 968
XceI RCATGY 3 cut(s) 778, 1181, 1311
XmiI GTMKAC 1 cut(s) 870
XspI CTAG 2 cut(s) 27, 771
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.