AT3G58120
BZIP Family

bZIP transcription factor family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0006664
Physical Location & Seq
Reverse (-)
21520974 .. 21523518
2545 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G58120.2

Sequence Viewer

Length: 990 bp
ATGGCACAACTTCCTCCGAAAATCCCAACCATGACGACGCCAAATTGGCCTGACTTCTCCTCCCAGAAACTCCCTTCCATAGCCGCAACGGCGGCAGCCGCAGCAACCGCTGGACCTCAACAACAAAACCCTTCATGGATGGATGAGTTTCTCGACTTCTCAGCGACTCGCCGTGGGACTCACCGTCGTTCTATAAGCGACTCCATTGCTTTCCTTGAACCACCTTCCTCCGGCGTCGGAAACCACCACTTCGATAGGTTTGACGACGAGCAATTCATGTCCATGTTCAACGACGACGTACACAACAATAACCACAATCATCATCATCATCACAGCATCAACGGCAATGTGGGTCCCACGCGTTCATCCTCCAACACCTCCACGCCGTCCGATCATAATAGCCTTAGCGACGACGACAACAACAAAGAAGCACCACCGTCCGATCATGATCATCACATGGACAATAATGTAGCCAATCAAAACAACGCCGCCGGTAACAATTACAACGAATCAGACGAGGTCCAAAGCCAGTGCAAGACGGAGCCACAAGATGGTCCGTCGGCGAATCAAAACTCCGGTGGAAGCTCCGGTAATCGTATTCACGACCCTAAAAGGGTAAAAAGAATTTTAGCAAATAGGCAATCAGCACAGAGATCAAGGGTGAGGAAATTGCAATACATATCAGAGCTTGAAAGGAGCGTTACTTCATTGCAGACTGAAGTGTCAGTGTTATCGCCAAGAGTTGCGTTTTTGGATCATCAGCGATTGCTTCTCAACGTCGACAATAGTGCTATCAAGCAACGAATCGCAGCTTTAGCACAAGATAAGATTTTCAAAGACGCTCATCAAGAAGCATTGAAGAGAGAAATAGAGAGACTTCGACAAGTATATCATCAACAAAGCCTCAAGAAGATGGAGAATAATGTCTCCGATCAATCTCCGGCCGATATCAAACCGTCCGTTGAGAAGGAACAGCTCCTCAATGTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000976 GO:0000977 GO:0001012 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006355 GO:0006810 GO:0006811 GO:0006820 GO:0006913 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0007231 GO:0007275 GO:0008150 GO:0008272 GO:0009267 GO:0009292 GO:0009294 GO:0009555 GO:0009605 GO:0009606 GO:0009612 GO:0009628 GO:0009652 GO:0009889 GO:0009891 GO:0009893 GO:0009970 GO:0009987 GO:0009991 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0015698 GO:0019219 GO:0019222 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031667 GO:0031668 GO:0031669 GO:0032501 GO:0032502 GO:0033554 GO:0042594 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0043621 GO:0044212 GO:0044424 GO:0044444 GO:0044464 GO:0044764 GO:0045595 GO:0045596 GO:0045893 GO:0045935 GO:0046907 GO:0048229 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051019 GO:0051093 GO:0051169 GO:0051170 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051252 GO:0051254 GO:0051641 GO:0051649 GO:0051704 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071470 GO:0071496 GO:0072348 GO:0080090 GO:0097159 GO:0104004 GO:0140110 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:1990837 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
bZIP_1 bZIP_2

Protein Analysis

329

Amino Acids

36.8

Weight (kDa)

6.3

Isoelectric Point (pI)

57.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
bZIP_2 PF07716 202 - 249 1.6e-08 Basic region leucine zipper
bZIP_1 PF00170 204 - 248 3.9e-09 bZIP transcription factor
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 721
AccB7I CCANNNNNTGG 1 cut(s) 551
AccI GTMKAC 1 cut(s) 780
AccII CGCG 1 cut(s) 361
AciI CCGC 5 cut(s) 84, 92, 99, 108, 489
AclWI GGATC 1 cut(s) 762
AcoI YGGCCR 1 cut(s) 942
AcsI RAATTY 1 cut(s) 624
AcuI CTGAAG 1 cut(s) 738
AcyI GRCGYC 2 cut(s) 38, 234
AfaI GTAC 1 cut(s) 300
AfiI CCNNNNNNNGG 3 cut(s) 230, 551, 613
AflIII ACRYGT 1 cut(s) 359
AgsI TTSAA 5 cut(s) 218, 289, 692, 835, 859
AhdI GACNNNNNGTC 1 cut(s) 183
AluBI AGCT 4 cut(s) 585, 688, 812, 976
AluI AGCT 4 cut(s) 585, 688, 812, 976
Alw26I GTCTC 2 cut(s) 868, 931
AlwI GGATC 1 cut(s) 762
AoxI GGCC 2 cut(s) 47, 942
ApeKI GCWGC 3 cut(s) 95, 101, 809
ApoI RAATTY 1 cut(s) 624
AspS9I GGNCC 4 cut(s) 113, 353, 520, 554
AsuHPI GGTGA 2 cut(s) 173, 673
AvaII GGWCC 4 cut(s) 113, 353, 520, 554
BbvI GCAGC 3 cut(s) 107, 113, 821
BccI CCATC 3 cut(s) 133, 545, 907
BceAI ACGGC 4 cut(s) 105, 156, 358, 370
BcgI CGANNNNNNTGC 4 cut(s) 188, 222, 770, 804
BclI TGATCA 1 cut(s) 448
BcoDI GTCTC 2 cut(s) 868, 931
BglI GCCNNNNNGGC 2 cut(s) 46, 89
BisI GCNGC 7 cut(s) 84, 93, 96, 99, 102, 489, 810
BlsI GCNGC 7 cut(s) 85, 94, 97, 100, 103, 490, 811
Bme18I GGWCC 4 cut(s) 113, 353, 520, 554
BmeRI GACNNNNNGTC 1 cut(s) 183
BmgT120I GGNCC 4 cut(s) 113, 353, 520, 554
BmiI GGNNCC 3 cut(s) 354, 355, 543
BmsI GCATC 1 cut(s) 345
Bpu10I CCTNAGC 1 cut(s) 404
BpuEI CTTGAG 1 cut(s) 890
BsaBI GATNNNNATC 1 cut(s) 447
BsaHI GRCGYC 2 cut(s) 38, 234
BsaJI CCNNGG 1 cut(s) 172
BsaWI WCCGGW 2 cut(s) 575, 587
BsaXI ACNNNNNCTCC 2 cut(s) 44, 74
Bsc4I CCNNNNNNNGG 3 cut(s) 230, 551, 613
Bse118I RCCGGY 1 cut(s) 491
Bse1I ACTGG 1 cut(s) 529
Bse3DI GCAATG 3 cut(s) 204, 352, 707
Bse8I GATNNNNATC 1 cut(s) 447
BseDI CCNNGG 1 cut(s) 172
BseGI GGATG 3 cut(s) 144, 148, 365
BseJI GATNNNNATC 1 cut(s) 447
BseLI CCNNNNNNNGG 3 cut(s) 230, 551, 613
BseMI GCAATG 3 cut(s) 204, 352, 707
BseMII CTCAG 1 cut(s) 174
BseNI ACTGG 1 cut(s) 529
BseRI GAGGAG 2 cut(s) 49, 968
BseX3I CGGCCG 1 cut(s) 942
BseXI GCAGC 3 cut(s) 107, 113, 821
Bsh1236I CGCG 1 cut(s) 361
Bsh1285I CGRYCG 1 cut(s) 945
BshFI GGCC 2 cut(s) 49, 944
BsiEI CGRYCG 1 cut(s) 945
BsiSI CCGG 5 cut(s) 231, 492, 576, 588, 941
BslFI GGGAC 2 cut(s) 190, 339
BslI CCNNNNNNNGG 3 cut(s) 230, 551, 613
BsmAI GTCTC 2 cut(s) 868, 931
BsmFI GGGAC 2 cut(s) 190, 339
BsnI GGCC 2 cut(s) 49, 944
Bsp143I GATC 6 cut(s) 391, 442, 448, 653, 754, 931
BspACI CCGC 5 cut(s) 84, 92, 99, 108, 489
BspANI GGCC 2 cut(s) 49, 944
BspCNI CTCAG 1 cut(s) 173
BspFNI CGCG 1 cut(s) 361
BspHI TCATGA 1 cut(s) 445
BspLI GGNNCC 3 cut(s) 354, 355, 543
BspPI GGATC 1 cut(s) 762
BsrDI GCAATG 3 cut(s) 204, 352, 707
BsrFI RCCGGY 1 cut(s) 491
BsrI ACTGG 1 cut(s) 529
BssAI RCCGGY 1 cut(s) 491
BssECI CCNNGG 1 cut(s) 172
BssMI GATC 6 cut(s) 391, 442, 448, 653, 754, 931
BssNI GRCGYC 2 cut(s) 38, 234
Bst4CI ACNGT 3 cut(s) 185, 438, 957
Bst6I CTCTTC 1 cut(s) 854
BstACI GRCGYC 2 cut(s) 38, 234
BstDEI CTNAG 2 cut(s) 160, 404
BstDSI CCRYGG 1 cut(s) 172
BstF5I GGATG 3 cut(s) 144, 148, 365
BstFNI CGCG 1 cut(s) 361
BstKTI GATC 6 cut(s) 394, 445, 451, 656, 757, 934
BstMAI GTCTC 2 cut(s) 868, 931
BstMBI GATC 6 cut(s) 391, 442, 448, 653, 754, 931
BstMCI CGRYCG 1 cut(s) 945
BstMWI GCNNNNNNNGC 8 cut(s) 46, 89, 92, 98, 101, 107, 342, 815
BstUI CGCG 1 cut(s) 361
BstV1I GCAGC 3 cut(s) 107, 113, 821
BstZI CGGCCG 1 cut(s) 942
BsuRI GGCC 2 cut(s) 49, 944
BtgI CCRYGG 1 cut(s) 172
BtsCI GGATG 3 cut(s) 144, 148, 365
BtsIMutI CAGTG 2 cut(s) 536, 732
CciI TCATGA 1 cut(s) 445
Cfr10I RCCGGY 1 cut(s) 491
Cfr13I GGNCC 4 cut(s) 113, 353, 520, 554
CseI GACGC 3 cut(s) 46, 223, 848
Csp6I GTAC 1 cut(s) 299
CviAII CATG 6 cut(s) 31, 135, 277, 283, 446, 457
CviQI GTAC 1 cut(s) 299
DdeI CTNAG 2 cut(s) 160, 404
DpnI GATC 6 cut(s) 393, 444, 450, 655, 756, 933
DpnII GATC 6 cut(s) 391, 442, 448, 653, 754, 931
DrdI GACNNNNNNGTC 1 cut(s) 721
DriI GACNNNNNGTC 1 cut(s) 183
DseDI GACNNNNNNGTC 1 cut(s) 721
EaeI YGGCCR 1 cut(s) 942
EagI CGGCCG 1 cut(s) 942
Eam1104I CTCTTC 1 cut(s) 854
Eam1105I GACNNNNNGTC 1 cut(s) 183
EarI CTCTTC 1 cut(s) 854
EclXI CGGCCG 1 cut(s) 942
Eco32I GATATC 1 cut(s) 949
Eco47I GGWCC 4 cut(s) 113, 353, 520, 554
Eco52I CGGCCG 1 cut(s) 942
Eco57I CTGAAG 1 cut(s) 738
EcoO109I RGGNCCY 1 cut(s) 353
EcoRV GATATC 1 cut(s) 949
FaeI CATG 6 cut(s) 34, 138, 280, 286, 449, 460
FaqI GGGAC 2 cut(s) 190, 339
FatI CATG 6 cut(s) 30, 134, 276, 282, 445, 456
FbaI TGATCA 1 cut(s) 448
FblI GTMKAC 1 cut(s) 780
Fnu4HI GCNGC 7 cut(s) 84, 93, 96, 99, 102, 489, 810
FokI GGATG 3 cut(s) 151, 155, 352
Fsp4HI GCNGC 7 cut(s) 84, 93, 96, 99, 102, 489, 810
GluI GCNGC 7 cut(s) 84, 93, 96, 99, 102, 489, 810
HaeIII GGCC 2 cut(s) 49, 944
HapII CCGG 5 cut(s) 231, 492, 576, 588, 941
HgaI GACGC 3 cut(s) 46, 223, 848
Hin1I GRCGYC 2 cut(s) 38, 234
Hin1II CATG 6 cut(s) 34, 138, 280, 286, 449, 460
HincII GTYRAC 1 cut(s) 781
HindII GTYRAC 1 cut(s) 781
HinfI GANTC 6 cut(s) 166, 178, 200, 509, 565, 804
HpaII CCGG 5 cut(s) 231, 492, 576, 588, 941
HphI GGTGA 2 cut(s) 173, 673
Hpy166II GTNNAC 2 cut(s) 301, 781
Hpy188I TCNGA 7 cut(s) 18, 239, 391, 442, 514, 685, 931
Hpy188III TCNNGA 5 cut(s) 152, 446, 602, 848, 907
Hpy8I GTNNAC 2 cut(s) 301, 781
HpyAV CCTTC 4 cut(s) 84, 141, 234, 961
HpyCH4III ACNGT 3 cut(s) 185, 438, 957
HpyCH4IV ACGT 2 cut(s) 297, 777
HpyCH4V TGCA 3 cut(s) 534, 673, 712
HpyF10VI GCNNNNNNNGC 8 cut(s) 46, 89, 92, 98, 101, 107, 342, 815
HpyF3I CTNAG 2 cut(s) 160, 404
HpySE526I ACGT 2 cut(s) 297, 777
Hsp92I GRCGYC 2 cut(s) 38, 234
Hsp92II CATG 6 cut(s) 34, 138, 280, 286, 449, 460
KflI GGGWCCC 1 cut(s) 353
Ksp22I TGATCA 1 cut(s) 448
Kzo9I GATC 6 cut(s) 391, 442, 448, 653, 754, 931
LmnI GCTCC 4 cut(s) 541, 590, 696, 981
LpnPI CCDG 9 cut(s) 63, 77, 96, 244, 505, 542, 589, 601, 954
Lsp1109I GCAGC 3 cut(s) 107, 113, 821
LweI GCATC 1 cut(s) 345
MaeII ACGT 2 cut(s) 297, 777
MaeIII GTNAC 2 cut(s) 494, 700
MalI GATC 6 cut(s) 393, 444, 450, 655, 756, 933
MboI GATC 6 cut(s) 391, 442, 448, 653, 754, 931
MboII GAAGA 2 cut(s) 871, 922
MluCI AATT 5 cut(s) 43, 272, 499, 624, 668
MluI ACGCGT 1 cut(s) 359
MlyI GAGTC 3 cut(s) 160, 172, 194
MmeI TCCRAC 2 cut(s) 217, 396
MslI CAYNNNNRTG 1 cut(s) 281
MspA1I CMGCKG 1 cut(s) 110
MspI CCGG 5 cut(s) 231, 492, 576, 588, 941
MvnI CGCG 1 cut(s) 361
MwoI GCNNNNNNNGC 8 cut(s) 46, 89, 92, 98, 101, 107, 342, 815
NdeII GATC 6 cut(s) 391, 442, 448, 653, 754, 931
NlaIII CATG 6 cut(s) 34, 138, 280, 286, 449, 460
NlaIV GGNNCC 3 cut(s) 354, 355, 543
PagI TCATGA 1 cut(s) 445
PcsI WCGNNNNNNNCGW 1 cut(s) 513
PfeI GAWTC 3 cut(s) 509, 565, 804
PflFI GACNNNGTC 1 cut(s) 518
PflMI CCANNNNNTGG 1 cut(s) 551
PkrI GCNGC 7 cut(s) 85, 94, 97, 100, 103, 490, 811
PleI GAGTC 3 cut(s) 160, 172, 194
PpsI GAGTC 3 cut(s) 160, 172, 194
PpuMI RGGWCCY 1 cut(s) 353
Psp5II RGGWCCY 1 cut(s) 353
PspN4I GGNNCC 3 cut(s) 354, 355, 543
PspPI GGNCC 4 cut(s) 113, 353, 520, 554
PspPPI RGGWCCY 1 cut(s) 353
PsyI GACNNNGTC 1 cut(s) 518
RsaI GTAC 1 cut(s) 300
RsaNI GTAC 1 cut(s) 299
RseI CAYNNNNRTG 1 cut(s) 281
SalI GTCGAC 1 cut(s) 779
SatI GCNGC 7 cut(s) 84, 93, 96, 99, 102, 489, 810
Sau3AI GATC 6 cut(s) 391, 442, 448, 653, 754, 931
Sau96I GGNCC 4 cut(s) 113, 353, 520, 554
SchI GAGTC 3 cut(s) 160, 172, 194
SfaNI GCATC 1 cut(s) 345
SinI GGWCC 4 cut(s) 113, 353, 520, 554
SmiMI CAYNNNNRTG 1 cut(s) 281
SmlI CTYRAG 1 cut(s) 905
SmoI CTYRAG 1 cut(s) 905
Sse9I AATT 5 cut(s) 43, 272, 499, 624, 668
SsiI CCGC 5 cut(s) 84, 92, 99, 108, 489
TaaI ACNGT 3 cut(s) 185, 438, 957
TaiI ACGT 2 cut(s) 300, 780
TaqI TCGA 4 cut(s) 153, 252, 780, 880
TasI AATT 5 cut(s) 43, 272, 499, 624, 668
TauI GCSGC 4 cut(s) 86, 95, 101, 491
TfiI GAWTC 3 cut(s) 509, 565, 804
TscAI CASTG 2 cut(s) 536, 732
TseI GCWGC 3 cut(s) 95, 101, 809
TspDTI ATGAA 4 cut(s) 123, 265, 354, 696
TspGWI ACGGA 3 cut(s) 546, 554, 949
TspRI CASTG 2 cut(s) 536, 732
Tth111I GACNNNGTC 1 cut(s) 518
Van91I CCANNNNNTGG 1 cut(s) 551
VpaK11BI GGWCC 4 cut(s) 113, 353, 520, 554
XapI RAATTY 1 cut(s) 624
XmiI GTMKAC 1 cut(s) 780
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.