Prupe.3G125500_v2.0.a1
BZIP Family

transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0006664
Physical Location & Seq
Reverse (-)
11561733 .. 11564995
3263 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G125500.1

Sequence Viewer

Length: 942 bp
ATGGCACAATTACCTCCTAAAATCCCAAGCATGACACCCAGTTGGCCTGACTTTTCTCACCAAAAGATGCCTCCCATGGGCCATTTTGCACCCAATGGAAATGCCCCTGCGGTCAACGCCACCACCGCATCTCAAAACTCTTGTTGGGTTGATGAATTCATCGACTTCTCTTCGGCGAGACGTGGGTCCCACCGGAGATCGGTCAGCGACTCCATTACCTTCCTCGAGACACCAATGCAGGACGAATGCCGTGCACCGCATGGTTCACACCCCAACAACCACGAGTTTGATAGGTTTGACGACGAACAATTCATGTCCATGTTCACAACCGAAGAAATCTCTGCTGCCGCCGCCGCCGCCGGCCCCACCGGCTCGTCCTCGAACCCGTCCTCGCCTTCCGACCATAACAGCATTAATGAGGACGAGAAAGAAGCGGATGCGCCTCATCACAAGCAGCTGAAGAACGAATCTGAAGAGGTGGAAAGCCAATGCGAACAACCAAATCCAAATGATACAACGAAGAGCAAGTCCAATGACAGGAAAATTGATCCAAAAAGGGTCAAGAGAATCTTGGCAAACAGACAATCTGCACAAAGATCACGGGTGAGGAAGCTGCAGTACATATCAGAACTCGAACGCAGCGTTACCTCTCTACAAGCTGAAGTTTCAGTTTTGTCACCGCGGGTTGCGTTTCTTGACCATCAACGCTTGCTGCTAAATGTCGACAACAGTGCTCTCAAACAAAGAATTGCAGCATTGGCGCAGGATAAGATTTTCAAAGATGCTCATCAAGAAGCATTGAAGAGGGAAATAGAGAGGCTAAGGCAAGTATATCACCAACAAAACCTCAAGAAGATGGAGAACGTTGCTCAATCACCAACACCACCCTCAGACACCATAACAACTCCTGAAAAAGAACAGCTCCTCAATGTTTCCTCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000976 GO:0000977 GO:0001012 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006355 GO:0006810 GO:0006811 GO:0006820 GO:0006913 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0007231 GO:0007275 GO:0008150 GO:0008272 GO:0009267 GO:0009292 GO:0009294 GO:0009555 GO:0009605 GO:0009606 GO:0009612 GO:0009628 GO:0009652 GO:0009889 GO:0009891 GO:0009893 GO:0009970 GO:0009987 GO:0009991 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0015698 GO:0019219 GO:0019222 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031667 GO:0031668 GO:0031669 GO:0032501 GO:0032502 GO:0033554 GO:0042594 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0043621 GO:0044212 GO:0044424 GO:0044444 GO:0044464 GO:0044764 GO:0045595 GO:0045596 GO:0045893 GO:0045935 GO:0046907 GO:0048229 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051019 GO:0051093 GO:0051169 GO:0051170 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051252 GO:0051254 GO:0051641 GO:0051649 GO:0051704 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071470 GO:0071496 GO:0072348 GO:0080090 GO:0097159 GO:0104004 GO:0140110 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:1990837 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
bZIP_1 bZIP_2

Protein Analysis

314

Amino Acids

35.14

Weight (kDa)

6.19

Isoelectric Point (pI)

61.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 723
AccII CGCG 1 cut(s) 682
AclI AACGTT 1 cut(s) 864
AclWI GGATC 1 cut(s) 542
AcsI RAATTY 1 cut(s) 155
AcuI CTGAAG 3 cut(s) 479, 492, 681
AfaI GTAC 1 cut(s) 620
AfiI CCNNNNNNNGG 3 cut(s) 77, 199, 537
AgsI TTSAA 2 cut(s) 778, 802
AjiI CACGTC 1 cut(s) 182
AluBI AGCT 4 cut(s) 457, 613, 659, 922
AluI AGCT 4 cut(s) 457, 613, 659, 922
Alw21I GWGCWC 2 cut(s) 256, 736
Alw26I GTCTC 2 cut(s) 172, 221
Alw44I GTGCAC 1 cut(s) 252
AlwI GGATC 1 cut(s) 542
Ama87I CYCGRG 1 cut(s) 224
AoxI GGCC 3 cut(s) 44, 79, 361
ApaLI GTGCAC 1 cut(s) 252
ApeKI GCWGC 6 cut(s) 344, 454, 613, 639, 712, 752
ApoI RAATTY 1 cut(s) 155
ArsI GACNNNNNNTTYG 2 cut(s) 512, 544
AseI ATTAAT 1 cut(s) 414
AspLEI GCGC 2 cut(s) 442, 763
AspS9I GGNCC 3 cut(s) 79, 186, 362
AsuHPI GGTGA 5 cut(s) 50, 616, 669, 827, 867
AvaI CYCGRG 1 cut(s) 224
AvaII GGWCC 1 cut(s) 186
BaeGI GKGCMC 1 cut(s) 256
BarI GAAGNNNNNNTAC 2 cut(s) 602, 634
BauI CACGAG 1 cut(s) 281
Bbv12I GWGCWC 2 cut(s) 256, 736
BbvI GCAGC 6 cut(s) 331, 466, 600, 651, 699, 764
BccI CCATC 2 cut(s) 708, 850
BceAI ACGGC 1 cut(s) 234
BcgI CGANNNNNNTGC 4 cut(s) 233, 267, 713, 747
BcoDI GTCTC 2 cut(s) 172, 221
BfmI CTRYAG 1 cut(s) 614
BglI GCCNNNNNGGC 1 cut(s) 369
Bme18I GGWCC 1 cut(s) 186
BmeT110I CYCGRG 1 cut(s) 224
BmgBI CACGTC 1 cut(s) 182
BmgT120I GGNCC 3 cut(s) 79, 186, 362
BmiI GGNNCC 3 cut(s) 187, 188, 364
BmrI ACTGGG 1 cut(s) 33
BmsI GCATC 4 cut(s) 57, 137, 427, 772
BmuI ACTGGG 1 cut(s) 33
BoxI GACNNNNGTC 1 cut(s) 184
Bpu10I CCTNAGC 1 cut(s) 821
BpuEI CTTGAG 1 cut(s) 833
BsaBI GATNNNNATC 1 cut(s) 786
BsaJI CCNNGG 2 cut(s) 75, 680
BsaWI WCCGGW 1 cut(s) 192
Bsc4I CCNNNNNNNGG 3 cut(s) 77, 199, 537
Bse118I RCCGGY 2 cut(s) 359, 368
Bse1I ACTGG 1 cut(s) 39
Bse8I GATNNNNATC 1 cut(s) 786
BseDI CCNNGG 2 cut(s) 75, 680
BseGI GGATG 1 cut(s) 442
BseJI GATNNNNATC 1 cut(s) 786
BseLI CCNNNNNNNGG 3 cut(s) 77, 199, 537
BseMII CTCAG 1 cut(s) 903
BseNI ACTGG 1 cut(s) 39
BseRI GAGGAG 1 cut(s) 914
BseSI GKGCMC 1 cut(s) 256
BseXI GCAGC 6 cut(s) 331, 466, 600, 651, 699, 764
BsgI GTGCAG 1 cut(s) 573
Bsh1236I CGCG 1 cut(s) 682
BshFI GGCC 3 cut(s) 46, 81, 363
BsiHKAI GWGCWC 2 cut(s) 256, 736
BsiHKCI CYCGRG 1 cut(s) 224
BsiSI CCGG 3 cut(s) 193, 360, 369
BslFI GGGAC 1 cut(s) 172
BslI CCNNNNNNNGG 3 cut(s) 77, 199, 537
BsmAI GTCTC 2 cut(s) 172, 221
BsmBI CGTCTC 1 cut(s) 172
BsmFI GGGAC 1 cut(s) 172
BsmI GAATGC 1 cut(s) 251
BsnI GGCC 3 cut(s) 46, 81, 363
BsoBI CYCGRG 1 cut(s) 224
Bsp1286I GDGCHC 2 cut(s) 256, 736
Bsp143I GATC 3 cut(s) 197, 547, 596
Bsp19I CCATGG 1 cut(s) 75
BspANI GGCC 3 cut(s) 46, 81, 363
BspCNI CTCAG 1 cut(s) 902
BspFNI CGCG 1 cut(s) 682
BspLI GGNNCC 3 cut(s) 187, 188, 364
BspMAI CTGCAG 1 cut(s) 618
BspPI GGATC 1 cut(s) 542
BspQI GCTCTTC 1 cut(s) 515
BsrFI RCCGGY 2 cut(s) 359, 368
BsrI ACTGG 1 cut(s) 39
BssAI RCCGGY 2 cut(s) 359, 368
BssECI CCNNGG 2 cut(s) 75, 680
BssMI GATC 3 cut(s) 197, 547, 596
BssSI CACGAG 1 cut(s) 281
BssT1I CCWWGG 1 cut(s) 75
Bst2BI CACGAG 1 cut(s) 281
Bst4CI ACNGT 1 cut(s) 731
Bst6I CTCTTC 4 cut(s) 175, 468, 515, 797
BstC8I GCNNGC 2 cut(s) 361, 710
BstDEI CTNAG 2 cut(s) 821, 889
BstDSI CCRYGG 2 cut(s) 75, 680
BstF5I GGATG 1 cut(s) 442
BstFNI CGCG 1 cut(s) 682
BstHHI GCGC 2 cut(s) 442, 763
BstKTI GATC 3 cut(s) 200, 550, 599
BstMAI GTCTC 2 cut(s) 172, 221
BstMBI GATC 3 cut(s) 197, 547, 596
BstMWI GCNNNNNNNGC 7 cut(s) 116, 125, 350, 353, 356, 369, 758
BstPAI GACNNNNGTC 1 cut(s) 184
BstSFI CTRYAG 1 cut(s) 614
BstSLI GKGCMC 1 cut(s) 256
BstUI CGCG 1 cut(s) 682
BstV1I GCAGC 6 cut(s) 331, 466, 600, 651, 699, 764
BsuRI GGCC 3 cut(s) 46, 81, 363
BtgI CCRYGG 2 cut(s) 75, 680
BtrI CACGTC 1 cut(s) 182
BtsCI GGATG 1 cut(s) 442
BtsIMutI CAGTG 1 cut(s) 736
Cac8I GCNNGC 2 cut(s) 361, 710
CfoI GCGC 2 cut(s) 442, 763
Cfr10I RCCGGY 2 cut(s) 359, 368
Cfr13I GGNCC 3 cut(s) 79, 186, 362
Cfr42I CCGCGG 1 cut(s) 683
Csp6I GTAC 1 cut(s) 619
CviAII CATG 5 cut(s) 31, 76, 260, 313, 319
CviQI GTAC 1 cut(s) 619
DdeI CTNAG 2 cut(s) 821, 889
DpnI GATC 3 cut(s) 199, 549, 598
DpnII GATC 3 cut(s) 197, 547, 596
Eam1104I CTCTTC 4 cut(s) 175, 468, 515, 797
EarI CTCTTC 4 cut(s) 175, 468, 515, 797
Eco130I CCWWGG 1 cut(s) 75
Eco47I GGWCC 1 cut(s) 186
Eco57I CTGAAG 3 cut(s) 479, 492, 681
Eco88I CYCGRG 1 cut(s) 224
EcoO109I RGGNCCY 1 cut(s) 186
EcoRI GAATTC 1 cut(s) 155
EcoT14I CCWWGG 1 cut(s) 75
ErhI CCWWGG 1 cut(s) 75
Esp3I CGTCTC 1 cut(s) 172
FaeI CATG 5 cut(s) 34, 79, 263, 316, 322
FaiI YATR 9 cut(s) 32, 77, 261, 314, 320, 405, 623, 832, 899
FalI AAGNNNNNCTT 2 cut(s) 554, 586
FaqI GGGAC 1 cut(s) 172
FatI CATG 5 cut(s) 30, 75, 259, 312, 318
FauI CCCGC 1 cut(s) 675
FblI GTMKAC 1 cut(s) 723
FokI GGATG 1 cut(s) 449
GlaI GCGC 2 cut(s) 441, 762
HaeIII GGCC 3 cut(s) 46, 81, 363
HapII CCGG 3 cut(s) 193, 360, 369
HhaI GCGC 2 cut(s) 442, 763
Hin1II CATG 5 cut(s) 34, 79, 263, 316, 322
Hin6I GCGC 2 cut(s) 440, 761
HinP1I GCGC 2 cut(s) 440, 761
HincII GTYRAC 2 cut(s) 115, 724
HindII GTYRAC 2 cut(s) 115, 724
HinfI GANTC 3 cut(s) 209, 467, 567
HpaII CCGG 3 cut(s) 193, 360, 369
HphI GGTGA 5 cut(s) 50, 616, 669, 827, 867
Hpy166II GTNNAC 5 cut(s) 115, 254, 266, 324, 724
Hpy188I TCNGA 4 cut(s) 400, 472, 628, 892
Hpy188III TCNNGA 6 cut(s) 226, 562, 695, 791, 850, 908
Hpy8I GTNNAC 5 cut(s) 115, 254, 266, 324, 724
Hpy99I CGWCG 1 cut(s) 305
HpyAV CCTTC 2 cut(s) 229, 405
HpyCH4III ACNGT 1 cut(s) 731
HpyCH4IV ACGT 2 cut(s) 181, 864
HpyCH4V TGCA 6 cut(s) 89, 238, 254, 590, 616, 752
HpyF10VI GCNNNNNNNGC 7 cut(s) 116, 125, 350, 353, 356, 369, 758
HpyF3I CTNAG 2 cut(s) 821, 889
HpySE526I ACGT 2 cut(s) 181, 864
Hsp92II CATG 5 cut(s) 34, 79, 263, 316, 322
HspAI GCGC 2 cut(s) 440, 761
KflI GGGWCCC 1 cut(s) 186
KroI GCCGGC 1 cut(s) 359
KroNI GCCGGC 1 cut(s) 361
KspI CCGCGG 1 cut(s) 683
Kzo9I GATC 3 cut(s) 197, 547, 596
LguI GCTCTTC 1 cut(s) 515
LmnI GCTCC 1 cut(s) 927
Lsp1109I GCAGC 6 cut(s) 331, 466, 600, 651, 699, 764
LweI GCATC 4 cut(s) 57, 137, 427, 772
MaeII ACGT 2 cut(s) 181, 864
MaeIII GTNAC 2 cut(s) 643, 675
MalI GATC 3 cut(s) 199, 549, 598
MboI GATC 3 cut(s) 197, 547, 596
MboII GAAGA 7 cut(s) 162, 344, 472, 485, 532, 814, 865
MhlI GDGCHC 2 cut(s) 256, 736
MluCI AATT 5 cut(s) 8, 155, 308, 543, 747
MlyI GAGTC 1 cut(s) 203
MmeI TCCRAC 1 cut(s) 423
MroNI GCCGGC 1 cut(s) 359
MseI TTAA 1 cut(s) 414
MslI CAYNNNNRTG 1 cut(s) 317
MspA1I CMGCKG 2 cut(s) 457, 682
MspI CCGG 3 cut(s) 193, 360, 369
Mva1269I GAATGC 1 cut(s) 251
MvnI CGCG 1 cut(s) 682
MwoI GCNNNNNNNGC 7 cut(s) 116, 125, 350, 353, 356, 369, 758
NaeI GCCGGC 1 cut(s) 361
NcoI CCATGG 1 cut(s) 75
NdeII GATC 3 cut(s) 197, 547, 596
NgoMIV GCCGGC 1 cut(s) 359
NlaIII CATG 5 cut(s) 34, 79, 263, 316, 322
NlaIV GGNNCC 3 cut(s) 187, 188, 364
NmuCI GTSAC 1 cut(s) 675
PaeR7I CTCGAG 1 cut(s) 224
PciSI GCTCTTC 1 cut(s) 515
PcsI WCGNNNNNNNCGW 1 cut(s) 639
PctI GAATGC 1 cut(s) 251
PdiI GCCGGC 1 cut(s) 361
PfeI GAWTC 2 cut(s) 467, 567
PleI GAGTC 1 cut(s) 203
PpsI GAGTC 1 cut(s) 203
PpuMI RGGWCCY 1 cut(s) 186
PshAI GACNNNNGTC 1 cut(s) 184
PshBI ATTAAT 1 cut(s) 414
Psp1406I AACGTT 1 cut(s) 864
Psp5II RGGWCCY 1 cut(s) 186
PspN4I GGNNCC 3 cut(s) 187, 188, 364
PspPI GGNCC 3 cut(s) 79, 186, 362
PspPPI RGGWCCY 1 cut(s) 186
PstI CTGCAG 1 cut(s) 618
PvuII CAGCTG 1 cut(s) 457
RsaI GTAC 1 cut(s) 620
RsaNI GTAC 1 cut(s) 619
RseI CAYNNNNRTG 1 cut(s) 317
SacII CCGCGG 1 cut(s) 683
SalI GTCGAC 1 cut(s) 722
SapI GCTCTTC 1 cut(s) 515
SaqAI TTAA 1 cut(s) 414
Sau3AI GATC 3 cut(s) 197, 547, 596
Sau96I GGNCC 3 cut(s) 79, 186, 362
SchI GAGTC 1 cut(s) 203
SduI GDGCHC 2 cut(s) 256, 736
SfaNI GCATC 4 cut(s) 57, 137, 427, 772
SfcI CTRYAG 1 cut(s) 614
Sfr274I CTCGAG 1 cut(s) 224
Sfr303I CCGCGG 1 cut(s) 683
SgrBI CCGCGG 1 cut(s) 683
SinI GGWCC 1 cut(s) 186
SlaI CTCGAG 1 cut(s) 224
SmiMI CAYNNNNRTG 1 cut(s) 317
SmlI CTYRAG 2 cut(s) 224, 848
SmoI CTYRAG 2 cut(s) 224, 848
Sse9I AATT 5 cut(s) 8, 155, 308, 543, 747
StyI CCWWGG 1 cut(s) 75
TaaI ACNGT 1 cut(s) 731
TaiI ACGT 2 cut(s) 184, 867
TaqI TCGA 5 cut(s) 162, 225, 380, 633, 723
TaqII GACCGA 1 cut(s) 190
TasI AATT 5 cut(s) 8, 155, 308, 543, 747
TatI WGTACW 1 cut(s) 618
TauI GCSGC 4 cut(s) 350, 353, 356, 359
TfiI GAWTC 2 cut(s) 467, 567
Tru1I TTAA 1 cut(s) 414
Tru9I TTAA 1 cut(s) 414
TscAI CASTG 1 cut(s) 736
TseFI GTSAC 1 cut(s) 675
TseI GCWGC 6 cut(s) 344, 454, 613, 639, 712, 752
Tsp45I GTSAC 1 cut(s) 675
TspDTI ATGAA 3 cut(s) 148, 168, 301
TspRI CASTG 1 cut(s) 736
VneI GTGCAC 1 cut(s) 252
VpaK11BI GGWCC 1 cut(s) 186
VspI ATTAAT 1 cut(s) 414
XapI RAATTY 1 cut(s) 155
XhoI CTCGAG 1 cut(s) 224
XmiI GTMKAC 1 cut(s) 723
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.