pycom17g23720
BZIP Family

transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
OG0006664
Physical Location & Seq
Reverse (-)
21998828 .. 22001560
2733 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g23720.2

Sequence Viewer

Length: 981 bp
ATGGCACAATTACCTCCAAAAGTTCCAAGCATGACACCCAATTGGCCTGACTTTTCACACCAGAAGATGCCGCCTTCAATGGGCGGCTGTTTTGCGCCAAATGGAAATGCCACAGCCGCCACCACGTCCCAAAACCCTTGTTGGGTCGATGAATTCCTCGACTTCTCGTCTGTGCGACGGGGATCCCACCGGAGATCCGTCAGCGACTCCACCAGCTTCCTCGAGGCACCAATGCAGGAAGAATGCCGCGTCTCCGCTGCACCTCCAGGCCCGCACTCGCACTCCCACGCTAACAACAATCACGAGTTTGATAGGTTTGACGACGAACAGTTCATGTCCATGTTCACCACCGATGAAATCTCCGCCGCTGCCGCAACAGTGGGACCCACGGGGTCGTCGTCGAACCCGTCCACGCCTTCCGATCATAACAGCATCAATGACGATGAGAAAGAAACGCAGGGGATTAATAAGCAGCAGCAGATCAATAAGCAGCTAAAGAATGAATTTGAAGAGGGGGAAAGCCAAGGCGAACTACAAACCACATCCAATGGTAGGAAAATTGACCACAAAAGAGTCAAGAGAATTTTGGCGAACAGACAATCTGCACAAAGATCACGGGTGAGGAAGCTGCAATACGTATCAGAACTCGAACGAAGTGTTAACTCTCTACAAGCTGAAGTTTCAGTGCTTTCACCAAGGGTTTCATTTCTTGACCATCAACGCTTGCTTTTAAATGTCGACAACAGTGCTCTCAAACAAAGAATTGCAGCATTGGCGCAGGATAATATCTTCAAAGACGCTCATCAAGAAGCATTAAAGAGGGAAATAGAGAGACTAAGGCAAGTATATCACCAACAAAACGTCAAGAAGATGGAGAGGGTCGCACAATCACCAACCTCACTTACACCCCCGTCGGACACCATATCAACTACTCCTCCTCCTGATCAAGGGGAACACCTTCTCAACGTGTCCTCATCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000976 GO:0000977 GO:0001012 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006355 GO:0006810 GO:0006811 GO:0006820 GO:0006913 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0007231 GO:0007275 GO:0008150 GO:0008272 GO:0009267 GO:0009292 GO:0009294 GO:0009555 GO:0009605 GO:0009606 GO:0009612 GO:0009628 GO:0009652 GO:0009889 GO:0009891 GO:0009893 GO:0009970 GO:0009987 GO:0009991 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0015698 GO:0019219 GO:0019222 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031667 GO:0031668 GO:0031669 GO:0032501 GO:0032502 GO:0033554 GO:0042594 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0043621 GO:0044212 GO:0044424 GO:0044444 GO:0044464 GO:0044764 GO:0045595 GO:0045596 GO:0045893 GO:0045935 GO:0046907 GO:0048229 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051019 GO:0051093 GO:0051169 GO:0051170 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051252 GO:0051254 GO:0051641 GO:0051649 GO:0051704 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071470 GO:0071496 GO:0072348 GO:0080090 GO:0097159 GO:0104004 GO:0140110 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:1990837 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
bZIP_1 bZIP_2

Protein Analysis

327

Amino Acids

36.35

Weight (kDa)

6.32

Isoelectric Point (pI)

59.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 221
AccB1I GGYRCC 1 cut(s) 226
AccI GTMKAC 1 cut(s) 738
AccII CGCG 1 cut(s) 249
AciI CCGC 9 cut(s) 71, 84, 117, 247, 255, 272, 363, 366, 372
AclWI GGATC 3 cut(s) 177, 189, 190
AcsI RAATTY 3 cut(s) 152, 503, 582
AcuI CTGAAG 1 cut(s) 696
AfiI CCNNNNNNNGG 4 cut(s) 80, 142, 552, 947
AflIII ACRYGT 1 cut(s) 966
AgsI TTSAA 3 cut(s) 78, 509, 793
AhdI GACNNNNNGTC 1 cut(s) 166
AjiI CACGTC 1 cut(s) 126
AjnI CCWGG 1 cut(s) 265
AluBI AGCT 4 cut(s) 216, 493, 628, 674
AluI AGCT 4 cut(s) 216, 493, 628, 674
Alw21I GWGCWC 1 cut(s) 751
Alw26I GTCTC 2 cut(s) 256, 826
AlwI GGATC 3 cut(s) 177, 189, 190
Ama87I CYCGRG 1 cut(s) 221
AoxI GGCC 2 cut(s) 44, 268
ApeKI GCWGC 7 cut(s) 257, 368, 472, 475, 490, 628, 767
ApoI RAATTY 3 cut(s) 152, 503, 582
AseI ATTAAT 1 cut(s) 465
Asp700I GAANNNNTTC 1 cut(s) 957
AspLEI GCGC 2 cut(s) 97, 778
AspS9I GGNCC 2 cut(s) 269, 383
AsuHPI GGTGA 5 cut(s) 337, 631, 684, 842, 882
AvaI CYCGRG 1 cut(s) 221
AvaII GGWCC 1 cut(s) 383
BamHI GGATCC 1 cut(s) 182
BanI GGYRCC 1 cut(s) 226
BarI GAAGNNNNNNTAC 2 cut(s) 617, 649
BauI CACGAG 1 cut(s) 302
Bbv12I GWGCWC 1 cut(s) 751
BbvI GCAGC 7 cut(s) 244, 355, 484, 487, 502, 615, 779
BccI CCATC 2 cut(s) 723, 865
BcgI CGANNNNNNTGC 2 cut(s) 728, 762
BciT130I CCWGG 1 cut(s) 267
BclI TGATCA 1 cut(s) 943
BcoDI GTCTC 2 cut(s) 256, 826
Bme1390I CCNGG 1 cut(s) 267
Bme18I GGWCC 1 cut(s) 383
BmeRI GACNNNNNGTC 1 cut(s) 166
BmeT110I CYCGRG 1 cut(s) 221
BmgBI CACGTC 1 cut(s) 126
BmgT120I GGNCC 2 cut(s) 269, 383
BmiI GGNNCC 4 cut(s) 184, 228, 384, 385
BmrFI CCNGG 1 cut(s) 267
BmsI GCATC 2 cut(s) 57, 441
BpmI CTGGAG 1 cut(s) 249
BsaAI YACGTR 1 cut(s) 637
BsaJI CCNNGG 3 cut(s) 387, 523, 695
BsaWI WCCGGW 1 cut(s) 189
BsaXI ACNNNNNCTCC 6 cut(s) 266, 296, 919, 922, 949, 952
Bsc4I CCNNNNNNNGG 4 cut(s) 80, 142, 552, 947
BseBI CCWGG 1 cut(s) 267
BseDI CCNNGG 3 cut(s) 387, 523, 695
BseGI GGATG 1 cut(s) 542
BseLI CCNNNNNNNGG 4 cut(s) 80, 142, 552, 947
BseRI GAGGAG 2 cut(s) 924, 927
BseXI GCAGC 7 cut(s) 244, 355, 484, 487, 502, 615, 779
BsgI GTGCAG 2 cut(s) 243, 588
Bsh1236I CGCG 1 cut(s) 249
BshFI GGCC 2 cut(s) 46, 270
BshNI GGYRCC 1 cut(s) 226
BsiHKAI GWGCWC 1 cut(s) 751
BsiHKCI CYCGRG 1 cut(s) 221
BsiSI CCGG 1 cut(s) 190
BslFI GGGAC 2 cut(s) 112, 396
BslI CCNNNNNNNGG 4 cut(s) 80, 142, 552, 947
BsmAI GTCTC 2 cut(s) 256, 826
BsmBI CGTCTC 1 cut(s) 256
BsmFI GGGAC 2 cut(s) 112, 396
BsmI GAATGC 1 cut(s) 248
BsnI GGCC 2 cut(s) 46, 270
BsoBI CYCGRG 1 cut(s) 221
Bsp1286I GDGCHC 1 cut(s) 751
Bsp143I GATC 6 cut(s) 182, 194, 421, 480, 611, 943
BspACI CCGC 9 cut(s) 71, 84, 117, 247, 255, 272, 363, 366, 372
BspANI GGCC 2 cut(s) 46, 270
BspFNI CGCG 1 cut(s) 249
BspLI GGNNCC 4 cut(s) 184, 228, 384, 385
BspPI GGATC 3 cut(s) 177, 189, 190
BspT107I GGYRCC 1 cut(s) 226
BssECI CCNNGG 3 cut(s) 387, 523, 695
BssMI GATC 6 cut(s) 182, 194, 421, 480, 611, 943
BssSI CACGAG 1 cut(s) 302
BssT1I CCWWGG 2 cut(s) 523, 695
Bst2BI CACGAG 1 cut(s) 302
Bst2UI CCWGG 1 cut(s) 267
Bst4CI ACNGT 3 cut(s) 330, 379, 746
Bst6I CTCTTC 1 cut(s) 504
BstBAI YACGTR 1 cut(s) 637
BstC8I GCNNGC 2 cut(s) 272, 725
BstDEI CTNAG 1 cut(s) 836
BstDSI CCRYGG 1 cut(s) 387
BstENI CCTNNNNNAGG 1 cut(s) 945
BstF5I GGATG 1 cut(s) 542
BstFNI CGCG 1 cut(s) 249
BstHHI GCGC 2 cut(s) 97, 778
BstKTI GATC 6 cut(s) 185, 197, 424, 483, 614, 946
BstMAI GTCTC 2 cut(s) 256, 826
BstMBI GATC 6 cut(s) 182, 194, 421, 480, 611, 943
BstMWI GCNNNNNNNGC 3 cut(s) 116, 371, 773
BstNI CCWGG 1 cut(s) 267
BstSCI CCNGG 1 cut(s) 265
BstSNI TACGTA 1 cut(s) 637
BstUI CGCG 1 cut(s) 249
BstV1I GCAGC 7 cut(s) 244, 355, 484, 487, 502, 615, 779
BstX2I RGATCY 2 cut(s) 182, 194
BstYI RGATCY 2 cut(s) 182, 194
BsuRI GGCC 2 cut(s) 46, 270
BtgI CCRYGG 1 cut(s) 387
BtrI CACGTC 1 cut(s) 126
BtsCI GGATG 1 cut(s) 542
BtsIMutI CAGTG 3 cut(s) 384, 690, 751
Cac8I GCNNGC 2 cut(s) 272, 725
CfoI GCGC 2 cut(s) 97, 778
Cfr13I GGNCC 2 cut(s) 269, 383
CseI GACGC 2 cut(s) 238, 806
CviAII CATG 3 cut(s) 31, 334, 340
CviJI RGCY 9 cut(s) 46, 87, 116, 216, 270, 493, 522, 628, 674
CviKI_1 RGCY 9 cut(s) 46, 87, 116, 216, 270, 493, 522, 628, 674
DdeI CTNAG 1 cut(s) 836
DpnI GATC 6 cut(s) 184, 196, 423, 482, 613, 945
DpnII GATC 6 cut(s) 182, 194, 421, 480, 611, 943
DraI TTTAAA 1 cut(s) 732
DriI GACNNNNNGTC 1 cut(s) 166
Eam1104I CTCTTC 1 cut(s) 504
Eam1105I GACNNNNNGTC 1 cut(s) 166
EarI CTCTTC 1 cut(s) 504
EciI GGCGGA 1 cut(s) 352
Eco105I TACGTA 1 cut(s) 637
Eco130I CCWWGG 2 cut(s) 523, 695
Eco47I GGWCC 1 cut(s) 383
Eco57I CTGAAG 1 cut(s) 696
Eco88I CYCGRG 1 cut(s) 221
EcoNI CCTNNNNNAGG 1 cut(s) 945
EcoO109I RGGNCCY 1 cut(s) 383
EcoRI GAATTC 1 cut(s) 152
EcoRII CCWGG 1 cut(s) 265
EcoT14I CCWWGG 2 cut(s) 523, 695
ErhI CCWWGG 2 cut(s) 523, 695
Esp3I CGTCTC 1 cut(s) 256
FaeI CATG 3 cut(s) 34, 337, 343
FaiI YATR 6 cut(s) 32, 335, 341, 426, 847, 923
FaqI GGGAC 2 cut(s) 112, 396
FatI CATG 3 cut(s) 30, 333, 339
FauI CCCGC 1 cut(s) 279
FbaI TGATCA 1 cut(s) 943
FblI GTMKAC 1 cut(s) 738
FokI GGATG 1 cut(s) 529
GlaI GCGC 2 cut(s) 96, 777
GsuI CTGGAG 1 cut(s) 249
HaeIII GGCC 2 cut(s) 46, 270
HapII CCGG 1 cut(s) 190
HgaI GACGC 2 cut(s) 238, 806
HhaI GCGC 2 cut(s) 97, 778
Hin1II CATG 3 cut(s) 34, 337, 343
Hin6I GCGC 2 cut(s) 95, 776
HinP1I GCGC 2 cut(s) 95, 776
HincII GTYRAC 2 cut(s) 661, 739
HindII GTYRAC 2 cut(s) 661, 739
HinfI GANTC 2 cut(s) 206, 573
HpaI GTTAAC 1 cut(s) 661
HpaII CCGG 1 cut(s) 190
HphI GGTGA 5 cut(s) 337, 631, 684, 842, 882
Hpy166II GTNNAC 4 cut(s) 345, 411, 661, 739
Hpy188I TCNGA 3 cut(s) 421, 643, 916
Hpy188III TCNNGA 7 cut(s) 302, 577, 710, 806, 865, 941, 978
Hpy8I GTNNAC 4 cut(s) 345, 411, 661, 739
Hpy99I CGWCG 5 cut(s) 180, 326, 400, 403, 916
HpyAV CCTTC 3 cut(s) 84, 426, 968
HpyCH4III ACNGT 3 cut(s) 330, 379, 746
HpyCH4IV ACGT 4 cut(s) 125, 636, 861, 966
HpyCH4V TGCA 5 cut(s) 235, 260, 605, 631, 767
HpyF10VI GCNNNNNNNGC 3 cut(s) 116, 371, 773
HpyF3I CTNAG 1 cut(s) 836
HpySE526I ACGT 4 cut(s) 125, 636, 861, 966
Hsp92II CATG 3 cut(s) 34, 337, 343
HspAI GCGC 2 cut(s) 95, 776
KflI GGGWCCC 1 cut(s) 383
Ksp22I TGATCA 1 cut(s) 943
KspAI GTTAAC 1 cut(s) 661
Kzo9I GATC 6 cut(s) 182, 194, 421, 480, 611, 943
Lsp1109I GCAGC 7 cut(s) 244, 355, 484, 487, 502, 615, 779
LweI GCATC 2 cut(s) 57, 441
MaeII ACGT 4 cut(s) 125, 636, 861, 966
MalI GATC 6 cut(s) 184, 196, 423, 482, 613, 945
MboI GATC 6 cut(s) 182, 194, 421, 480, 611, 943
MboII GAAGA 5 cut(s) 76, 251, 521, 781, 880
MfeI CAATTG 1 cut(s) 40
MflI RGATCY 2 cut(s) 182, 194
MhlI GDGCHC 1 cut(s) 751
MluCI AATT 7 cut(s) 8, 40, 152, 503, 558, 582, 762
MlyI GAGTC 2 cut(s) 200, 582
MmeI TCCRAC 1 cut(s) 894
MroXI GAANNNNTTC 1 cut(s) 957
MseI TTAA 4 cut(s) 465, 660, 731, 815
MslI CAYNNNNRTG 1 cut(s) 338
MspA1I CMGCKG 2 cut(s) 257, 368
MspI CCGG 1 cut(s) 190
MspR9I CCNGG 1 cut(s) 267
MunI CAATTG 1 cut(s) 40
Mva1269I GAATGC 1 cut(s) 248
MvaI CCWGG 1 cut(s) 267
MvnI CGCG 1 cut(s) 249
MwoI GCNNNNNNNGC 3 cut(s) 116, 371, 773
NdeII GATC 6 cut(s) 182, 194, 421, 480, 611, 943
NlaIII CATG 3 cut(s) 34, 337, 343
NlaIV GGNNCC 4 cut(s) 184, 228, 384, 385
PaeR7I CTCGAG 1 cut(s) 221
PcsI WCGNNNNNNNCGW 2 cut(s) 395, 404
PctI GAATGC 1 cut(s) 248
PdmI GAANNNNTTC 1 cut(s) 957
PleI GAGTC 2 cut(s) 200, 581
PpsI GAGTC 2 cut(s) 200, 581
Ppu21I YACGTR 1 cut(s) 637
PpuMI RGGWCCY 1 cut(s) 383
PshBI ATTAAT 1 cut(s) 465
Psp5II RGGWCCY 1 cut(s) 383
Psp6I CCWGG 1 cut(s) 265
PspGI CCWGG 1 cut(s) 265
PspN4I GGNNCC 4 cut(s) 184, 228, 384, 385
PspPI GGNCC 2 cut(s) 269, 383
PspPPI RGGWCCY 1 cut(s) 383
PspXI VCTCGAGB 1 cut(s) 221
PsuI RGATCY 2 cut(s) 182, 194
RseI CAYNNNNRTG 1 cut(s) 338
SalI GTCGAC 1 cut(s) 737
SaqAI TTAA 4 cut(s) 465, 660, 731, 815
Sau3AI GATC 6 cut(s) 182, 194, 421, 480, 611, 943
Sau96I GGNCC 2 cut(s) 269, 383
SchI GAGTC 2 cut(s) 200, 582
ScrFI CCNGG 1 cut(s) 267
SduI GDGCHC 1 cut(s) 751
SfaNI GCATC 2 cut(s) 57, 441
Sfr274I CTCGAG 1 cut(s) 221
SinI GGWCC 1 cut(s) 383
SlaI CTCGAG 1 cut(s) 221
SmiMI CAYNNNNRTG 1 cut(s) 338
SmlI CTYRAG 1 cut(s) 221
SmoI CTYRAG 1 cut(s) 221
SnaBI TACGTA 1 cut(s) 637
Sse9I AATT 7 cut(s) 8, 40, 152, 503, 558, 582, 762
SsiI CCGC 9 cut(s) 71, 84, 117, 247, 255, 272, 363, 366, 372
StyD4I CCNGG 1 cut(s) 265
StyI CCWWGG 2 cut(s) 523, 695
TaaI ACNGT 3 cut(s) 330, 379, 746
TaiI ACGT 4 cut(s) 128, 639, 864, 969
TaqI TCGA 6 cut(s) 147, 159, 222, 401, 648, 738
TasI AATT 7 cut(s) 8, 40, 152, 503, 558, 582, 762
TauI GCSGC 6 cut(s) 73, 87, 119, 249, 368, 374
Tru1I TTAA 4 cut(s) 465, 660, 731, 815
Tru9I TTAA 4 cut(s) 465, 660, 731, 815
TscAI CASTG 3 cut(s) 384, 690, 751
TseI GCWGC 7 cut(s) 257, 368, 472, 475, 490, 628, 767
TspDTI ATGAA 5 cut(s) 165, 322, 369, 516, 693
TspGWI ACGGA 1 cut(s) 187
TspRI CASTG 3 cut(s) 384, 690, 751
VpaK11BI GGWCC 1 cut(s) 383
VspI ATTAAT 1 cut(s) 465
XagI CCTNNNNNAGG 1 cut(s) 945
XapI RAATTY 3 cut(s) 152, 503, 582
XhoI CTCGAG 1 cut(s) 221
XmiI GTMKAC 1 cut(s) 738
XmnI GAANNNNTTC 1 cut(s) 957
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.