Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0005400

Physical Location & Seq

Genomic Coordinates Reverse (-)

770722 .. 776439

Gene Structure 5718 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G01800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3069 bp

ATGGTGTCTCCACTCTGCGACTCTCAGTTACTTTACCACCGCCCCTCGATCTCACCTACCGCTTCTCAGTTCGTGATCGCGGATGGAATCATCCTCCGGCAAAATCGTCTTCTGAGCTCTTCGTCGTTTTGGGGCACCAAATTCGGAAACACCGTCAAGTTGGGAGTATCTGGATGTAGTAGCTGCTCTCGGAAGAGAAGCACGAGTGTGAATGCTTCACTAGGTGGTCTTCTTAGCGGAATTTTCAAGGGTTCTGATAACGGAGAGTCGACTAGGCAACAGTACGCATCCATCGTCGCATCCGTTAATCGCTTGGAGACTGAGATTTCGGCTCTTTCGGATTCTGAGTTGCGAGAGAGGACTGATGCGTTGAAGCAACGTGCTCAGAAAGGAGAATCCATGGATTCACTTTTACCTGAAGCATTTGCTGTTGTGAGAGAAGCTTCCAAGAGAGTTCTTGGACTCAGACCTTTCGATGTGCAATTAATTGGTGGTATGGTTCTTCATAAAGGAGAAATAGCTGAAATGAGAACTGGTGAAGGGAAAACGCTTGTTGCTATTTTACCAGCTTATTTGAATGCATTAAGTGGGAAAGGTGTTCATGTGGTTACAGTTAATGATTATCTTGCTCGAAGAGATTGTGAATGGGTTGGTCAAGTTCCTCGGTTCCTTGGATTGAAGGTTGGTCTAATCCAACAGAATATGACACCTGAACAAAGAAAGGAAAATTATTTATGCGATATCACATATGTCACCAACAGTGAGCTTGGATTTGATTATCTGAGAGACAATCTAGCCACGAGTGTTGAGGAGCTCGTCTTGAGGGATTTCAATTATTGTGTGATTGATGAAGTTGATTCCATACTTATTGATGAAGCAAGGACTCCTCTCATTATCTCTGGGCCTGCAGAGAAACCTAGTGACCAATATTACAAAGCTGCAAAGATTGCTTCAGCCTTTGAGCGGGATATACATTACACTGTTGATGAAAAGCAGAAGACTGTTTTACTGACGGAACAGGGTTATGAGGATGCAGAAGAAATCCTGGACGTGAAAGATTTGTATGATCCCCGTGAACAGTGGGCATCATATGTTCTTAATGCCATTAAGGCAAAAGAACTTTTTCTCAGAGATGTGAACTATATCATCCGAGCAAAGGAGGTTCTTATCGTGGATGAGTTTACTGGTCGTGTAATGCAGGGAAGACGTTGGAGTGATGGACTACATCAAGCTGTTGAAGCAAAAGAAGGCTTGCCTATTCAGAATGAATCTATTACTCTGGCGTCAATTAGTTATCAAAACTTCTTTCTGCAGTTTCCGAAACTTTGCGGGATGACGGGTACAGCATCGACCGAGAGTGCAGAATTTGAAAGCATATACAAGCTTAAAGTTACAATTGTACCCACAAATAAGCCCATGATAAGAAAGGATGAGTCAGATGTGGTTTTCAAGGCAGTCAATGGCAAATGGCGGGCAGTAGTAGTGGAGATCTCTAGAATGCACAAGACAGGTAGGGCTGTGCTAGTTGGCACAACCAGTGTCGAGCAGAGTGATGAACTATCGCAACTGTTGAGGGAAGCTGGAATAACTCATGAGGTCCTCAATGCCAAGCCAGAAAATGTGGAGAGGGAAGCTGAAATTGTAGCACAAAGTGGCCGTTTAGGGGCAGTAACAATTGCCACAAATATGGCAGGGCGTGGGACAGACATAATTCTTGGTGGAAACGCAGAGTTCATGGCACGTTTGAAGCTTCGTGAGATACTTATGCCCAGAGTGGTAAAGCCTACTGATGGTGTTTTTGTATCTGTGAAGAAGGCCCCTCCCAAGAGAACATGGAAGGTGAATGAGAAGTTATTTCCATGCAAACTGTCAAATGAGAAAGCAAAGCTAGCTGAAGAAGCTGTACAATCAGCTGTAGAGGCTTGGGGCCAGAAATCGTTAACTGAGCTTGAAGCAGAGGAACGTTTATCTTATTCTTGTGAAAAGGGTCCTGTCCAAGATGAAGTTATAGGTAAACTGAGGACTGCATTTCTGGCGATAGCGAAAGAATATAAGGGCTACACTGATGAAGAAAGGAAGAAGGTGGTGGAAGCTGGTGGACTTCACGTGGTGGGGACAGAGCGGCATGAATCACGTCGAATAGACAATCAGTTGCGTGGGCGAAGTGGCCGGCAAGGGGATCCTGGAAGTTCCCGATTCTTCCTTAGTCTTGAAGATAACATATTCCGCATTTTTGGTGGAGATCGGATTCAGGGTATGATGAGGGCATTCAGGGTGGAAGATTTACCGATCGAATCCAAGATGCTTACTAAAGCTCTAGATGAAGCTCAGAGAAAAGTTGAGAATTACTTCTTTGACATCAGAAAGCAATTATTCGAATTTGACGAGGTTCTCAATAGCCAAAGAGATCGTGTTTATACAGAGAGAAGGCGTGCTCTTGTGTCGGACAGCCTTGAGCCTCTGATTATCGAGTATGCTGAATTGACAATGGATGACATTCTAGAGGCAAATATTGGCCCAGATACTCCAAAGGAAAGCTGGGATTTTGAAAAGCTCATTGCGAAAGTTCAGCAGTACTGTTACCTGTTGAACGATCTCACTCCCGATTTGCTGAAAAGCGAAGGATCAAGTTATGAAGGGTTGCAAGATTATCTCCGTGCCCGTGGCCGCGATGCATACTTACAGAAAAGAGAAATCGTGGAGAAACAATCACCAGGGCTAATGAAAGATGCCGAACGATTCTTAATCTTGAGCAATATTGATAGGTTATGGAAAGAACACCTTCAAGCACTCAAGTTCGTGCAACAAGCTGTGGGGCTCAGAGGATATGCGCAACGCGATCCACTCATCGAGTATAAGCTCGAAGGATACAATCTATTTCTGGAAATGATGGCTCAAATACGAAGAAATGTGATATACTCCATATATCAGTTTCAACCAGTGCGGGTAAAGAAGGACGAAGAGAAGAAGTCTCAGAACGGGAAACCGAGCAAACAAGTAGATAATGCTAGTGAGAAGCCTAAACAAGTTGGTGTCACAGATGAGCCATCCTCAATTGCAAGCGCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0005215 GO:0005488 GO:0005524 GO:0006810 GO:0008104 GO:0008144 GO:0008150 GO:0008320 GO:0008565 GO:0015031 GO:0015399 GO:0015405 GO:0015440 GO:0015450 GO:0015462 GO:0015833 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017076 GO:0017111 GO:0022804 GO:0022857 GO:0022884 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0033036 GO:0033220 GO:0035639 GO:0036094 GO:0042623 GO:0042626 GO:0042886 GO:0042887 GO:0043167 GO:0043168 GO:0043492 GO:0045184 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0071806 GO:0097159 GO:0097367 GO:1901265 GO:1901363 GO:1904680

KEGG Pathways

Metabolic & Signaling

ko02024 ko03060 ko03070 map02024 map03060 map03070

Pfam Domains

Protein Families

SecA_DEAD SecA_PP_bind SecA_SW

Protein Analysis

1022

Amino Acids

115.18

Weight (kDa)

6.07

Isoelectric Point (pI)

41.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SecA_DEAD	PF07517	89 - 457	1.7e-126	SecA DEAD-like domain
DEAD	PF00270	173 - 290	2.3e-07	DEAD/DEAH box helicase
SecA_PP_bind	PF01043	307 - 413	5.4e-39	SecA preprotein cross-linking domain
P-loop_SecA	PF21090	472 - 761	1.6e-81	SecA P-loop domain
SecA_SW	PF07516	763 - 979	2.8e-56	SecA Wing and Scaffold domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005400)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G01800 AT4G01800 AT4G01800
fragaria_vesca	FvH4_1g26240
malus_domestica	MD17G1285000.v1.1
prunus_persica	Prupe.3G002700_v2.0.a1
pyrus_communis	pycom09g19850 pycom17g28080 pycom17g28090
rosa_chinensis	RchiOBHm_Chr3g0485781
rosa_laevigata	RLG00000023125
rosa_multiflora	Rmu_co8471925.1_g000001 Rmu_sc0012870.1_g000002
rosa_roxburghii	Rroxscaffold_2G00123840
rosa_rugosa	Rorug03G0221400
rosa_samantha	Rh1AG180100 Rh1CG167100 Rh3AG270700 Rh3BG306200 Rh3BG306300 Rh3CG304600 Rh3DG300700 Rh4AG241300 Rh4AG241400 Rh4BG244600 Rh4BG244700 Rh4CG255400 Rh7CG119700
rosa_wichuraiana	Rw3G024110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	2832
AccB1I	GGYRCC	1 cut(s)	134
AccBSI	CCGCTC	2 cut(s)	964, 2122
AccI	GTMKAC	1 cut(s)	269
AccII	CGCG	3 cut(s)	80, 2670, 2838
AclI	AACGTT	1 cut(s)	1963
AclWI	GGATC	5 cut(s)	1061, 2174, 2187, 2632, 2834
AcoI	YGGCCR	3 cut(s)	1654, 2167, 2665
AcsI	RAATTY	4 cut(s)	140, 240, 1364, 2378
AcuI	CTGAAG	3 cut(s)	438, 936, 1914
AcvI	CACGTG	1 cut(s)	2107
AcyI	GRCGYC	1 cut(s)	1283
AdeI	CACNNNGTG	3 cut(s)	224, 1652, 2110
AfaI	GTAC	5 cut(s)	284, 1342, 1401, 1905, 2576
AfiI	CCNNNNNNNGG	5 cut(s)	963, 1156, 1663, 1790, 2176
AjiI	CACGTC	2 cut(s)	1051, 2135
AjnI	CCWGG	3 cut(s)	1044, 2182, 2713
AleI	CACNNNNGTG	1 cut(s)	206
Alw21I	GWGCWC	4 cut(s)	119, 385, 816, 2437
Alw26I	GTCTC	4 cut(s)	12, 311, 780, 2976
AlwI	GGATC	5 cut(s)	1061, 2174, 2187, 2632, 2834
AoxI	GGCC	7 cut(s)	902, 1654, 1815, 1927, 2167, 2515, 2665
ApeKI	GCWGC	2 cut(s)	183, 938
ApoI	RAATTY	4 cut(s)	140, 240, 1364, 2378
ArsI	GACNNNNNNTTYG	2 cut(s)	310, 342
AseI	ATTAAT	1 cut(s)	485
Asp700I	GAANNNNTTC	3 cut(s)	1122, 2348, 2781
AspLEI	GCGC	2 cut(s)	2833, 3065
AspS9I	GGNCC	6 cut(s)	902, 1597, 1816, 1927, 1988, 2516
AsuHPI	GGTGA	5 cut(s)	45, 548, 745, 1852, 2703
AsuII	TTCGAA	1 cut(s)	2376
AsuNHI	GCTAGC	1 cut(s)	1888
AvaII	GGWCC	2 cut(s)	1597, 1988
BaeGI	GKGCMC	2 cut(s)	137, 2662
BaeI	ACNNNNGTAYC	2 cut(s)	1383, 1416
BamHI	GGATCC	1 cut(s)	2179
BanI	GGYRCC	1 cut(s)	134
BanII	GRGCYC	3 cut(s)	119, 816, 2820
BarI	GAAGNNNNNNTAC	2 cut(s)	1887, 1919
BauI	CACGAG	2 cut(s)	202, 799
BbrPI	CACGTG	1 cut(s)	2107
BbsI	GAAGAC	4 cut(s)	101, 221, 1004, 1210
Bbv12I	GWGCWC	4 cut(s)	119, 385, 816, 2437
BbvI	GCAGC	2 cut(s)	170, 925
BccI	CCATC	6 cut(s)	77, 299, 1211, 1784, 2884, 3055
BceAI	ACGGC	1 cut(s)	1641
BcgI	CGANNNNNNTGC	2 cut(s)	124, 158
BciT130I	CCWGG	3 cut(s)	1046, 2184, 2715
BciVI	GTATCC	1 cut(s)	2861
BcoDI	GTCTC	4 cut(s)	12, 311, 780, 2976
BfmI	CTRYAG	3 cut(s)	906, 1310, 1914
BfoI	RGCGCY	1 cut(s)	3066
BfuI	GTATCC	1 cut(s)	2861
BglI	GCCNNNNNGGC	1 cut(s)	1109
BglII	AGATCT	1 cut(s)	1488
BisI	GCNGC	4 cut(s)	184, 939, 2123, 2668
BlsI	GCNGC	4 cut(s)	185, 940, 2124, 2669
BmcAI	AGTACT	1 cut(s)	2576
Bme1390I	CCNGG	3 cut(s)	1046, 2184, 2715
Bme18I	GGWCC	2 cut(s)	1597, 1988
BmgBI	CACGTC	2 cut(s)	1051, 2135
BmgT120I	GGNCC	6 cut(s)	902, 1597, 1816, 1927, 1988, 2516
BmiI	GGNNCC	6 cut(s)	136, 668, 1818, 1928, 1989, 2181
BmrFI	CCNGG	3 cut(s)	1046, 2184, 2715
BmsI	GCATC	9 cut(s)	296, 308, 355, 1021, 1094, 1355, 2292, 2662, 2719
BmtI	GCTAGC	1 cut(s)	1892
BpiI	GAAGAC	4 cut(s)	101, 221, 1004, 1210
BplI	GAGNNNNNCTC	2 cut(s)	3035, 3067
Bpu14I	TTCGAA	1 cut(s)	2376
BpuEI	CTTGAG	4 cut(s)	841, 2474, 2770, 2777
BsaAI	YACGTR	1 cut(s)	2107
BsaHI	GRCGYC	1 cut(s)	1283
BsaJI	CCNNGG	5 cut(s)	399, 662, 670, 2662, 2714
Bsc4I	CCNNNNNNNGG	5 cut(s)	963, 1156, 1663, 1790, 2176
Bse118I	RCCGGY	1 cut(s)	2169
Bse1I	ACTGG	4 cut(s)	538, 1189, 1536, 2939
Bse3DI	GCAATG	1 cut(s)	2556
BseBI	CCWGG	3 cut(s)	1046, 2184, 2715
BseDI	CCNNGG	5 cut(s)	399, 662, 670, 2662, 2714
BseLI	CCNNNNNNNGG	5 cut(s)	963, 1156, 1663, 1790, 2176
BseMI	GCAATG	1 cut(s)	2556
BseNI	ACTGG	4 cut(s)	538, 1189, 1536, 2939
BseRI	GAGGAG	2 cut(s)	824, 876
BseSI	GKGCMC	2 cut(s)	137, 2662
BseXI	GCAGC	2 cut(s)	170, 925
BseYI	CCCAGC	1 cut(s)	2538
BsgI	GTGCAG	1 cut(s)	1380
Bsh1236I	CGCG	3 cut(s)	80, 2670, 2838
Bsh1285I	CGRYCG	2 cut(s)	1353, 2292
BshFI	GGCC	7 cut(s)	904, 1656, 1817, 1929, 2169, 2517, 2667
BshNI	GGYRCC	1 cut(s)	134
BsiEI	CGRYCG	2 cut(s)	1353, 2292
BsiHKAI	GWGCWC	4 cut(s)	119, 385, 816, 2437
BsiSI	CCGG	2 cut(s)	97, 2170
BslFI	GGGAC	2 cut(s)	1714, 2128
BslI	CCNNNNNNNGG	5 cut(s)	963, 1156, 1663, 1790, 2176
BsmAI	GTCTC	4 cut(s)	12, 311, 780, 2976
BsmFI	GGGAC	2 cut(s)	1714, 2128
BsmI	GAATGC	4 cut(s)	217, 583, 1503, 2267
BsnI	GGCC	7 cut(s)	904, 1656, 1817, 1929, 2169, 2517, 2667
Bsp119I	TTCGAA	1 cut(s)	2376
Bsp1286I	GDGCHC	7 cut(s)	119, 137, 385, 816, 2437, 2662, 2820
Bsp1407I	TGTACA	1 cut(s)	1903
Bsp19I	CCATGG	1 cut(s)	399
BspANI	GGCC	7 cut(s)	904, 1656, 1817, 1929, 2169, 2517, 2667
BspFNI	CGCG	3 cut(s)	80, 2670, 2838
BspHI	TCATGA	1 cut(s)	1591
BspLI	GGNNCC	6 cut(s)	136, 668, 1818, 1928, 1989, 2181
BspMAI	CTGCAG	2 cut(s)	910, 1314
BspOI	GCTAGC	1 cut(s)	1892
BspPI	GGATC	5 cut(s)	1061, 2174, 2187, 2632, 2834
BspQI	GCTCTTC	1 cut(s)	124
BspT104I	TTCGAA	1 cut(s)	2376
BspT107I	GGYRCC	1 cut(s)	134
BsrBI	CCGCTC	2 cut(s)	964, 2122
BsrDI	GCAATG	1 cut(s)	2556
BsrFI	RCCGGY	1 cut(s)	2169
BsrGI	TGTACA	1 cut(s)	1903
BsrI	ACTGG	4 cut(s)	538, 1189, 1536, 2939
BssAI	RCCGGY	1 cut(s)	2169
BssECI	CCNNGG	5 cut(s)	399, 662, 670, 2662, 2714
BssNI	GRCGYC	1 cut(s)	1283
BssSI	CACGAG	2 cut(s)	202, 799
BssT1I	CCWWGG	2 cut(s)	399, 670
Bst2BI	CACGAG	2 cut(s)	202, 799
Bst2UI	CCWGG	3 cut(s)	1046, 2184, 2715
Bst6I	CTCTTC	4 cut(s)	124, 188, 628, 2955
BstACI	GRCGYC	1 cut(s)	1283
BstAPI	GCANNNNNTGC	1 cut(s)	947
BstAUI	TGTACA	1 cut(s)	1903
BstBAI	YACGTR	1 cut(s)	2107
BstBI	TTCGAA	1 cut(s)	2376
BstC8I	GCNNGC	7 cut(s)	906, 1253, 1473, 1890, 2171, 2433, 3061
BstDSI	CCRYGG	2 cut(s)	399, 2662
BstFNI	CGCG	3 cut(s)	80, 2670, 2838
BstH2I	RGCGCY	1 cut(s)	3066
BstHHI	GCGC	2 cut(s)	2833, 3065
BstMAI	GTCTC	4 cut(s)	12, 311, 780, 2976
BstMCI	CGRYCG	2 cut(s)	1353, 2292
BstMWI	GCNNNNNNNGC	7 cut(s)	947, 1109, 1238, 1889, 1898, 1919, 2033
BstNI	CCWGG	3 cut(s)	1046, 2184, 2715
BstSCI	CCNGG	3 cut(s)	1044, 2182, 2713
BstSFI	CTRYAG	3 cut(s)	906, 1310, 1914
BstSLI	GKGCMC	2 cut(s)	137, 2662
BstUI	CGCG	3 cut(s)	80, 2670, 2838
BstV1I	GCAGC	2 cut(s)	170, 925
BstV2I	GAAGAC	4 cut(s)	101, 221, 1004, 1210
BstX2I	RGATCY	2 cut(s)	1488, 2179
BstXI	CCANNNNNNTGG	1 cut(s)	1687
BstYI	RGATCY	2 cut(s)	1488, 2179
BsuI	GTATCC	1 cut(s)	2861
BsuRI	GGCC	7 cut(s)	904, 1656, 1817, 1929, 2169, 2517, 2667
BtgI	CCRYGG	2 cut(s)	399, 2662
BtgZI	GCGATG	1 cut(s)	2685
BtrI	CACGTC	2 cut(s)	1051, 2135
BtsIMutI	CAGTG	6 cut(s)	766, 978, 1085, 1543, 2061, 2946
Cac8I	GCNNGC	7 cut(s)	906, 1253, 1473, 1890, 2171, 2433, 3061
CciI	TCATGA	1 cut(s)	1591
CfoI	GCGC	2 cut(s)	2833, 3065
Cfr10I	RCCGGY	1 cut(s)	2169
Cfr13I	GGNCC	6 cut(s)	902, 1597, 1816, 1927, 1988, 2516
CseI	GACGC	1 cut(s)	1272
Csp6I	GTAC	5 cut(s)	283, 1341, 1400, 1904, 2575
CspCI	CAANNNNNGTGG	2 cut(s)	787, 822
CviAII	CATG	8 cut(s)	400, 602, 1417, 1592, 1735, 1833, 1860, 2126
CviQI	GTAC	5 cut(s)	283, 1341, 1400, 1904, 2575
DraIII	CACNNNGTG	3 cut(s)	224, 1652, 2110
EaeI	YGGCCR	3 cut(s)	1654, 2167, 2665
Eam1104I	CTCTTC	4 cut(s)	124, 188, 628, 2955
EarI	CTCTTC	4 cut(s)	124, 188, 628, 2955
Ecl136II	GAGCTC	2 cut(s)	117, 814
Eco130I	CCWWGG	2 cut(s)	399, 670
Eco24I	GRGCYC	3 cut(s)	119, 816, 2820
Eco32I	GATATC	1 cut(s)	742
Eco47I	GGWCC	2 cut(s)	1597, 1988
Eco53kI	GAGCTC	2 cut(s)	117, 814
Eco57I	CTGAAG	3 cut(s)	438, 936, 1914
Eco72I	CACGTG	1 cut(s)	2107
EcoICRI	GAGCTC	2 cut(s)	117, 814
EcoO109I	RGGNCCY	3 cut(s)	1597, 1816, 1988
EcoRII	CCWGG	3 cut(s)	1044, 2182, 2713
EcoRV	GATATC	1 cut(s)	742
EcoT14I	CCWWGG	2 cut(s)	399, 670
EcoT22I	ATGCAT	2 cut(s)	583, 2677
EcoT38I	GRGCYC	3 cut(s)	119, 816, 2820
ErhI	CCWWGG	2 cut(s)	399, 670
FaeI	CATG	8 cut(s)	403, 605, 1420, 1595, 1738, 1836, 1863, 2129
FalI	AAGNNNNNCTT	2 cut(s)	2766, 2798
FaqI	GGGAC	2 cut(s)	1714, 2128
FatI	CATG	8 cut(s)	399, 601, 1416, 1591, 1734, 1832, 1859, 2125
FauI	CCCGC	4 cut(s)	957, 1322, 1464, 2937
FauNDI	CATATG	2 cut(s)	748, 1090
FblI	GTMKAC	1 cut(s)	269
Fnu4HI	GCNGC	4 cut(s)	184, 939, 2123, 2668
FriOI	GRGCYC	3 cut(s)	119, 816, 2820
Fsp4HI	GCNGC	4 cut(s)	184, 939, 2123, 2668
FspI	TGCGCA	1 cut(s)	2832
GlaI	GCGC	2 cut(s)	2832, 3064
GluI	GCNGC	4 cut(s)	184, 939, 2123, 2668
GsaI	CCCAGC	1 cut(s)	2542
HaeII	RGCGCY	1 cut(s)	3066
HaeIII	GGCC	7 cut(s)	904, 1656, 1817, 1929, 2169, 2517, 2667
HapII	CCGG	2 cut(s)	97, 2170
HgaI	GACGC	1 cut(s)	1272
HhaI	GCGC	2 cut(s)	2833, 3065
Hin1I	GRCGYC	1 cut(s)	1283
Hin1II	CATG	8 cut(s)	403, 605, 1420, 1595, 1738, 1836, 1863, 2129
Hin6I	GCGC	2 cut(s)	2831, 3063
HinP1I	GCGC	2 cut(s)	2831, 3063
HincII	GTYRAC	2 cut(s)	270, 1941
HindII	GTYRAC	2 cut(s)	270, 1941
HindIII	AAGCTT	3 cut(s)	441, 1382, 1748
HpaI	GTTAAC	1 cut(s)	1941
HpaII	CCGG	2 cut(s)	97, 2170
HphI	GGTGA	5 cut(s)	45, 548, 745, 1852, 2703
Hpy166II	GTNNAC	7 cut(s)	270, 1076, 1138, 1182, 1941, 2015, 2099
Hpy8I	GTNNAC	7 cut(s)	270, 1076, 1138, 1182, 1941, 2015, 2099
Hpy99I	CGWCG	3 cut(s)	127, 299, 2139
HpyCH4IV	ACGT	7 cut(s)	379, 1050, 1207, 1741, 1963, 2106, 2134
HpyF10VI	GCNNNNNNNGC	7 cut(s)	947, 1109, 1238, 1889, 1898, 1919, 2033
HpySE526I	ACGT	7 cut(s)	379, 1050, 1207, 1741, 1963, 2106, 2134
Hsp92I	GRCGYC	1 cut(s)	1283
Hsp92II	CATG	8 cut(s)	403, 605, 1420, 1595, 1738, 1836, 1863, 2129
HspAI	GCGC	2 cut(s)	2831, 3063
KroI	GCCGGC	1 cut(s)	2169
KroNI	GCCGGC	1 cut(s)	2171
KspAI	GTTAAC	1 cut(s)	1941
LguI	GCTCTTC	1 cut(s)	124
LmnI	GCTCC	1 cut(s)	811
Lsp1109I	GCAGC	2 cut(s)	170, 925
LweI	GCATC	9 cut(s)	296, 308, 355, 1021, 1094, 1355, 2292, 2662, 2719
MaeII	ACGT	7 cut(s)	379, 1050, 1207, 1741, 1963, 2106, 2134
MaeIII	GTNAC	8 cut(s)	27, 607, 751, 920, 1390, 1669, 2579, 3034
MbiI	CCGCTC	2 cut(s)	964, 2122
MfeI	CAATTG	3 cut(s)	1395, 1674, 3054
MflI	RGATCY	2 cut(s)	1488, 2179
MhlI	GDGCHC	7 cut(s)	119, 137, 385, 816, 2437, 2662, 2820
MlyI	GAGTC	5 cut(s)	14, 275, 456, 877, 1442
MmeI	TCCRAC	3 cut(s)	718, 1190, 2424
Mph1103I	ATGCAT	2 cut(s)	583, 2677
MroNI	GCCGGC	1 cut(s)	2169
MroXI	GAANNNNTTC	3 cut(s)	1122, 2348, 2781
MseI	TTAA	9 cut(s)	306, 485, 584, 615, 1098, 1107, 1386, 1940, 2744
MslI	CAYNNNNRTG	2 cut(s)	206, 1685
MspA1I	CMGCKG	1 cut(s)	1913
MspI	CCGG	2 cut(s)	97, 2170
MspR9I	CCNGG	3 cut(s)	1046, 2184, 2715
MunI	CAATTG	3 cut(s)	1395, 1674, 3054
Mva1269I	GAATGC	4 cut(s)	217, 583, 1503, 2267
MvaI	CCWGG	3 cut(s)	1046, 2184, 2715
MvnI	CGCG	3 cut(s)	80, 2670, 2838
MwoI	GCNNNNNNNGC	7 cut(s)	947, 1109, 1238, 1889, 1898, 1919, 2033
NaeI	GCCGGC	1 cut(s)	2171
NcoI	CCATGG	1 cut(s)	399
NdeI	CATATG	2 cut(s)	748, 1090
NgoMIV	GCCGGC	1 cut(s)	2169
NheI	GCTAGC	1 cut(s)	1888
NlaIII	CATG	8 cut(s)	403, 605, 1420, 1595, 1738, 1836, 1863, 2129
NlaIV	GGNNCC	6 cut(s)	136, 668, 1818, 1928, 1989, 2181
NmuCI	GTSAC	3 cut(s)	751, 920, 3034
NsbI	TGCGCA	1 cut(s)	2832
NsiI	ATGCAT	2 cut(s)	583, 2677
NspV	TTCGAA	1 cut(s)	2376
OliI	CACNNNNGTG	1 cut(s)	206
PagI	TCATGA	1 cut(s)	1591
PciSI	GCTCTTC	1 cut(s)	124
PcsI	WCGNNNNNNNCGW	4 cut(s)	150, 291, 300, 2382
PctI	GAATGC	4 cut(s)	217, 583, 1503, 2267
PdiI	GCCGGC	1 cut(s)	2171
PdmI	GAANNNNTTC	3 cut(s)	1122, 2348, 2781
PfoI	TCCNGGA	2 cut(s)	1044, 2182
PkrI	GCNGC	4 cut(s)	185, 940, 2124, 2669
Ple19I	CGATCG	1 cut(s)	2292
PleI	GAGTC	5 cut(s)	14, 274, 456, 877, 1441
PmaCI	CACGTG	1 cut(s)	2107
PmlI	CACGTG	1 cut(s)	2107
PpsI	GAGTC	5 cut(s)	14, 274, 456, 877, 1441
Ppu21I	YACGTR	1 cut(s)	2107
PpuMI	RGGWCCY	2 cut(s)	1597, 1988
PshBI	ATTAAT	1 cut(s)	485
Psp124BI	GAGCTC	2 cut(s)	119, 816
Psp1406I	AACGTT	1 cut(s)	1963
Psp5II	RGGWCCY	2 cut(s)	1597, 1988
Psp6I	CCWGG	3 cut(s)	1044, 2182, 2713
PspCI	CACGTG	1 cut(s)	2107
PspFI	CCCAGC	1 cut(s)	2538
PspGI	CCWGG	3 cut(s)	1044, 2182, 2713
PspN4I	GGNNCC	6 cut(s)	136, 668, 1818, 1928, 1989, 2181
PspPI	GGNCC	6 cut(s)	902, 1597, 1816, 1927, 1988, 2516
PspPPI	RGGWCCY	2 cut(s)	1597, 1988
PstI	CTGCAG	2 cut(s)	910, 1314
PsuI	RGATCY	2 cut(s)	1488, 2179
PvuI	CGATCG	1 cut(s)	2292
PvuII	CAGCTG	1 cut(s)	1913
RsaI	GTAC	5 cut(s)	284, 1342, 1401, 1905, 2576
RsaNI	GTAC	5 cut(s)	283, 1341, 1400, 1904, 2575
RseI	CAYNNNNRTG	2 cut(s)	206, 1685
SacI	GAGCTC	2 cut(s)	119, 816
SalI	GTCGAC	1 cut(s)	268
SapI	GCTCTTC	1 cut(s)	124
SaqAI	TTAA	9 cut(s)	306, 485, 584, 615, 1098, 1107, 1386, 1940, 2744
SatI	GCNGC	4 cut(s)	184, 939, 2123, 2668
Sau96I	GGNCC	6 cut(s)	902, 1597, 1816, 1927, 1988, 2516
ScaI	AGTACT	1 cut(s)	2576
SchI	GAGTC	5 cut(s)	14, 275, 456, 877, 1442
ScrFI	CCNGG	3 cut(s)	1046, 2184, 2715
SduI	GDGCHC	7 cut(s)	119, 137, 385, 816, 2437, 2662, 2820
SfaNI	GCATC	9 cut(s)	296, 308, 355, 1021, 1094, 1355, 2292, 2662, 2719
SfcI	CTRYAG	3 cut(s)	906, 1310, 1914
SfuI	TTCGAA	1 cut(s)	2376
SinI	GGWCC	2 cut(s)	1597, 1988
SmiMI	CAYNNNNRTG	2 cut(s)	206, 1685
SmlI	CTYRAG	4 cut(s)	820, 2453, 2749, 2792
SmoI	CTYRAG	4 cut(s)	820, 2453, 2749, 2792
SspI	AATATT	3 cut(s)	929, 2512, 2758
SstI	GAGCTC	2 cut(s)	119, 816
StyD4I	CCNGG	3 cut(s)	1044, 2182, 2713
StyI	CCWWGG	2 cut(s)	399, 670
TaiI	ACGT	7 cut(s)	382, 1053, 1210, 1744, 1966, 2109, 2137
TaqII	GACCGA	1 cut(s)	1367
TatI	WGTACW	2 cut(s)	1903, 2574
TauI	GCSGC	2 cut(s)	2125, 2670
Tru1I	TTAA	9 cut(s)	306, 485, 584, 615, 1098, 1107, 1386, 1940, 2744
Tru9I	TTAA	9 cut(s)	306, 485, 584, 615, 1098, 1107, 1386, 1940, 2744
TscAI	CASTG	6 cut(s)	766, 985, 1085, 1543, 2068, 2946
TseFI	GTSAC	3 cut(s)	751, 920, 3034
TseI	GCWGC	2 cut(s)	183, 938
Tsp45I	GTSAC	3 cut(s)	751, 920, 3034
TspGWI	ACGGA	4 cut(s)	276, 292, 1028, 2645
TspRI	CASTG	6 cut(s)	766, 985, 1085, 1543, 2068, 2946
VpaK11BI	GGWCC	2 cut(s)	1597, 1988
VspI	ATTAAT	1 cut(s)	485
XapI	RAATTY	4 cut(s)	140, 240, 1364, 2378
XbaI	TCTAGA	3 cut(s)	1493, 2317, 2500
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2535
XmiI	GTMKAC	1 cut(s)	269
XmnI	GAANNNNTTC	3 cut(s)	1122, 2348, 2781
ZrmI	AGTACT	1 cut(s)	2576
Zsp2I	ATGCAT	2 cut(s)	583, 2677

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.