Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0005400

Physical Location & Seq

Genomic Coordinates Reverse (-)

178171 .. 185447

Gene Structure 7277 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G002700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3111 bp

ATGGCGGCGACACATCTGTGTGAGTCTCCTCTGGTGAAGCATCATCACCCTTGTGTTTCACTGTCACCCCTGTGCTCTTCTAAGCTTTCCCATACCCTCCTAGACCTCAAAAAGTCCCACTTGGGTACCTTTTCTTTCGGTGGAAAAACCTTTCAAATGCCCAAAACATCAAGAATGGCAAGTCGAAGAAGGCGACGAATGCAAGCAGTGGCTTCGTTGGGAGGTTTGTTAGGTGGGATTTTCAAAGGGACTGACACTGGCGAGTCCACGAGGCAGCAGTATGCTTCCACCGTTTCTGTCATCAATGGCTTGGAAGCTCAGATGTCTGCACTCTCCGATTCTGAGCTGAGAGAAAAGACACGGCTCTTTCAAGAACGTGCCAAGCAGGGCGAGTCTTTGGATTCTCTTTTACCTGAAGCATTCGCTGTCATAAGAGAGGCTTCGAAGAGGGTTTTAGGCCTTCGTCCCTTTGATGTCCAACTCATAGGTGGCATGGTTCTTCATAAGGGGGAAATAGCTGAAATGAGAACCGGAGAAGGAAAAACCCTTGTTGCTATCTTACCAGCTTATTTGAATGCATTAATTGGAAAAGGTGTTCATGTTGTTACTGTCAATGATTATCTGGCCCGGCGGGATTGTGAGTGGGTTGGTCAAGTTCCTCGTTTCCTTGGATTGAAGGTTGGCCTAATCCAGCAGAATATGACAAGTGAACAAAGAAGGGAGAATTACTTATGTGACATCACATACGTTACCAACAGTGAGCTTGGTTTTGATTACTTGAGAGATAATCTGGCCACGGAAACTGAATGCATTTCTTCATATGTACAGAGTGTTGAGGAGCTTGTCTTGAGGAACTTCAACTACTGTGTAATTGATGAGGTTGATTCCATCCTCATTGATGAAGCAAGGACACCTCTCATAATATCTGGACCTGCAGAAAAACCTAGTGATCGGTATTATAAAGCTGCAAAGATTGCCGCAGTCTTTGAGCAAGAGATACATTACACTGTGGATGAAAAGCAGAAAACAGTTCTGCTCACAGAACAGGGTTATGAAGACTCTGAAGAGATTCTGGGTGTAAAAGATTTATATGATCCCCGAGAACAGTGGGCATCTTATGTTCTGAATGCAATAAAAGCGAAAGAACTCTTTCTTAGAGATGTAAACTATATCATTCGTGGCAAAGAGGTTCTTATTGTTGATGAGTTTACAGGTCGAGTTATGCAGGGGAGGCGATGGAGTGATGGACTTCACCAAGCAGTTGAAGCAAAAGAAGGTCTGCCAATTCAAAATGAAACTGTAACACTGGCTTCAATTAGCTACCAAAATTTCTTTCTCCAGTTCCCGAAACTTTGTGGGATGACTGGCACTGCAGCAACTGAAAGCACAGAATTTGAAAGCATATACAAGCTTAAAGTTACAATTGTGCCAACAAACAAGCCTATGATTAGAAAGGATGAGTCCGATGTAGTTTTCAGGGCAACTACAGGAAAATGGCGGGCAGTTGTAGTAGAGATTTCTAGAATGCACAAGACAGGTCGTCCTGTACTTGTTGGCACAACTAGTGTTGAGCAGAGTGACTCGTTGTCTGAGCAGTTGCAAGAAGTTGGAATTCCCCATGAGGTTCTCAATGCAAAACCAGAAAATGTGGAAAGGGAAGCAGAAATTGTAGCCCAAAGTGGTCGTCTAGGGGCAGTGACCATTGCGACCAATATGGCAGGTCGAGGAACTGACATTATCCTTGGGGGGAATGCTGAATTTATGGCCAGGTTGAAGCTTCGGGAGATGCTTATGCCAAGAGTTGTTAAGCTAACTGAAGGCGGTTATGTGTCAGTGAAAAAACTTCCCCCAAAGAAAACATGGAAGGTGAATGAAAACCTATTTCCGTGCAAACTGTCCAATGAAAAGACCAAGTTGGCTGAGGAAGCTGTAAAGTTAGCTGTTGACACGTGGGGTCAGAGATCATTAACTGAGCTTGAAGCAGAGGAGCGTCTATCATATTCTTGTGAAAAGGCCCCTGCTCAGGATCCAGTCATAGACAAACTGCGGAGTGCCTTTCTAGAAATTGTTAGAGAATACAAGGTCTACACAGAGGAAGAAAGGAAGAAGGTTGTGTCAGCTGGTGGGCTTCATGTTGTGGGGACAGAGCGCCATGAATCTCGCCGAGTTGATAATCAGCTGCGTGGTCGAACTGGCAGGCAGGGGGACCCTGGAAGTTCTCGCTTCTTCTTAAGTCTTGAAGATAACATCTTTCGTATATTTGGTGGAGACCGTATTCAGGGTTTAATGAGAGCTTTTAGAGTTGAGGACCTACCAATTGAGTCCAAGATGCTGACCAAAGCACTAGATGAAGCTCAGCGGAAAGTGGAAAATTATTTTTTTGACATCCGAAAGCAATTATTTGAGTTTGATGAAGTCTTAAACAGCCAAAGAGACCGTGTCTACACAGAAAGAAGACGGGCCCTTGAATCTGACAATCTCCAATCGCTTATAATTGAATATGCTGAACTAACAATGGATGATATCTTGGAGGCAAATATTGGTTCAGATGCTTCAAAAGAAAGCTGGGATCTTGAGAAGCTCATCAAGAAACTTCAACAATATTGCTACCTATTGAATGATTTGACACCAGACTTGCTGAGGAGCAAGTGTTCAAGTTACGAGGATTTGCAGGACTACCTTCGTCGCCGTGGTCGTGAAGCATATTTGCAGAAAAGGGATATTATCGAGAGCAAAGCACCAGGCTTGACAAAGGATGCTGAAAGGTTCTTAGTTTTGAGCAATATTGATCGCTTGTGGAAGGAGCACTTACAAGCACTTAAGTTCGTTCAGCAAGCTGTGGGATTACGTGGATACGCACAAAGGGATCCACTTATTGAATATAAGCTTGAAGGCTATAATCTTTTCTTGGAGATGATGGCACAGATAAGAAGAAATGTTATATATTCCATTTACCAGTTTCAACCGGTGCTTGTAAAGAAGGATCAAGACCAAAGAGAGAATAAGAGTTCAACAGAAGTTGTCACAAATGGTAGGGGTAATAATAACCCGGATCCAGTTAACGCCATTGAGTCTTCTTCAGCAGCTGCGACCCCACAATCTAGTGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0005215 GO:0005488 GO:0005524 GO:0006810 GO:0008104 GO:0008144 GO:0008150 GO:0008320 GO:0008565 GO:0015031 GO:0015399 GO:0015405 GO:0015440 GO:0015450 GO:0015462 GO:0015833 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017076 GO:0017111 GO:0022804 GO:0022857 GO:0022884 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0033036 GO:0033220 GO:0035639 GO:0036094 GO:0042623 GO:0042626 GO:0042886 GO:0042887 GO:0043167 GO:0043168 GO:0043492 GO:0045184 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0071806 GO:0097159 GO:0097367 GO:1901265 GO:1901363 GO:1904680

KEGG Pathways

Metabolic & Signaling

ko02024 ko03060 ko03070 map02024 map03060 map03070

Pfam Domains

Protein Families

SecA_DEAD SecA_PP_bind SecA_SW

Protein Analysis

1037

Amino Acids

117.3

Weight (kDa)

6.52

Isoelectric Point (pI)

48.16

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005400)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G01800 AT4G01800 AT4G01800
fragaria_vesca	FvH4_1g26240
malus_domestica	MD17G1285000.v1.1
prunus_persica	Prupe.3G002700_v2.0.a1
pyrus_communis	pycom09g19850 pycom17g28080 pycom17g28090
rosa_chinensis	RchiOBHm_Chr3g0485781
rosa_laevigata	RLG00000023125
rosa_multiflora	Rmu_co8471925.1_g000001 Rmu_sc0012870.1_g000002
rosa_roxburghii	Rroxscaffold_2G00123840
rosa_rugosa	Rorug03G0221400
rosa_samantha	Rh1AG180100 Rh1CG167100 Rh3AG270700 Rh3BG306200 Rh3BG306300 Rh3CG304600 Rh3DG300700 Rh4AG241300 Rh4AG241400 Rh4BG244600 Rh4BG244700 Rh4CG255400 Rh7CG119700
rosa_wichuraiana	Rw3G024110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	960, 2492
Acc36I	ACCTGC	2 cut(s)	940, 1709
Acc65I	GGTACC	1 cut(s)	125
AccB1I	GGYRCC	1 cut(s)	125
AccI	GTMKAC	2 cut(s)	2085, 2442
AciI	CCGC	7 cut(s)	5, 631, 978, 1498, 1821, 2047, 2359
AclWI	GGATC	9 cut(s)	1088, 2021, 2034, 2577, 2861, 2874, 2991, 3047, 3060
AcoI	YGGCCR	2 cut(s)	792, 1764
AcsI	RAATTY	4 cut(s)	1327, 1391, 1611, 1757
AcuI	CTGAAG	4 cut(s)	435, 1083, 1836, 3063
AcvI	CACGTG	1 cut(s)	1950
AfaI	GTAC	3 cut(s)	127, 825, 1548
AfiI	CCNNNNNNNGG	2 cut(s)	2023, 2278
AflII	CTTAAG	2 cut(s)	2230, 2819
AflIII	ACRYGT	1 cut(s)	1947
AgeI	ACCGGT	1 cut(s)	2965
AhdI	GACNNNNNGTC	2 cut(s)	1539, 1585
AhlI	ACTAGT	1 cut(s)	1562
AjnI	CCWGG	3 cut(s)	1766, 2209, 2740
AjuI	GAANNNNNNNTTGG	2 cut(s)	1317, 1349
AleI	CACNNNNGTG	3 cut(s)	16, 51, 70
AloI	GAACNNNNNNTCC	4 cut(s)	579, 611, 2635, 2667
Alw21I	GWGCWC	2 cut(s)	77, 2808
Alw26I	GTCTC	3 cut(s)	30, 2262, 2427
AlwI	GGATC	9 cut(s)	1088, 2021, 2034, 2577, 2861, 2874, 2991, 3047, 3060
AlwNI	CAGNNNCTG	2 cut(s)	1379, 3086
Ama87I	CYCGRG	1 cut(s)	1098
AoxI	GGCC	7 cut(s)	457, 624, 682, 792, 1764, 2013, 2460
ApaI	GGGCCC	1 cut(s)	2464
ApeKI	GCWGC	6 cut(s)	274, 965, 1373, 2179, 3083, 3086
ApoI	RAATTY	4 cut(s)	1327, 1391, 1611, 1757
ArsI	GACNNNNNNTTYG	2 cut(s)	1669, 1701
AseI	ATTAAT	1 cut(s)	581
AsiGI	ACCGGT	1 cut(s)	2965
Asp700I	GAANNNNTTC	2 cut(s)	1068, 1149
Asp718I	GGTACC	1 cut(s)	125
AspLEI	GCGC	1 cut(s)	2151
AspS9I	GGNCC	7 cut(s)	625, 929, 2014, 2206, 2308, 2460, 2461
AsuC2I	CCSGG	2 cut(s)	628, 3050
AsuHPI	GGTGA	5 cut(s)	38, 46, 57, 1244, 1879
AsuII	TTCGAA	1 cut(s)	443
AvaI	CYCGRG	1 cut(s)	1098
AvaII	GGWCC	3 cut(s)	929, 2206, 2308
BaeGI	GKGCMC	1 cut(s)	2464
BaeI	ACNNNNGTAYC	2 cut(s)	109, 142
BalI	TGGCCA	2 cut(s)	794, 1766
BamHI	GGATCC	3 cut(s)	2026, 2866, 3052
BanI	GGYRCC	1 cut(s)	125
BanII	GRGCYC	1 cut(s)	2464
BauI	CACGAG	1 cut(s)	268
BbrPI	CACGTG	1 cut(s)	1950
BbsI	GAAGAC	3 cut(s)	1062, 2461, 3066
Bbv12I	GWGCWC	2 cut(s)	77, 2808
BbvCI	CCTCAGC	2 cut(s)	1920, 2639
BbvI	GCAGC	6 cut(s)	286, 952, 1385, 2166, 3073, 3095
BccI	CCATC	4 cut(s)	896, 1230, 1238, 2911
BceAI	ACGGC	2 cut(s)	377, 2673
BcgI	CGANNNNNNTGC	2 cut(s)	195, 229
BciT130I	CCWGG	3 cut(s)	1768, 2211, 2742
BciVI	GTATCC	1 cut(s)	2846
BcnI	CCSGG	2 cut(s)	628, 3050
BcoDI	GTCTC	3 cut(s)	30, 2262, 2427
BcuI	ACTAGT	1 cut(s)	1562
BfaI	CTAG	8 cut(s)	101, 945, 1521, 1563, 1688, 2060, 2345, 3102
BfmI	CTRYAG	3 cut(s)	933, 1371, 1485
BfoI	RGCGCY	1 cut(s)	2152
BfrI	CTTAAG	2 cut(s)	2230, 2819
BfuAI	ACCTGC	2 cut(s)	940, 1709
BfuI	GTATCC	1 cut(s)	2846
BisI	GCNGC	8 cut(s)	6, 275, 966, 978, 1374, 2180, 3084, 3087
BlpI	GCTNAGC	1 cut(s)	2355
BlsI	GCNGC	8 cut(s)	7, 276, 967, 979, 1375, 2181, 3085, 3088
Bme1390I	CCNGG	5 cut(s)	628, 1768, 2211, 2742, 3050
Bme18I	GGWCC	3 cut(s)	929, 2206, 2308
BmeRI	GACNNNNNGTC	2 cut(s)	1539, 1585
BmeT110I	CYCGRG	1 cut(s)	1098
BmgT120I	GGNCC	7 cut(s)	625, 929, 2014, 2206, 2308, 2460, 2461
BmiI	GGNNCC	8 cut(s)	127, 2016, 2028, 2207, 2208, 2462, 2868, 3054
BmrFI	CCNGG	5 cut(s)	628, 1768, 2211, 2742, 3050
BmsI	GCATC	6 cut(s)	49, 1121, 1776, 2319, 2539, 2746
BpiI	GAAGAC	3 cut(s)	1062, 2461, 3066
BpmI	CTGGAG	1 cut(s)	1322
Bpu10I	CCTNAGC	3 cut(s)	1920, 2022, 2639
Bpu1102I	GCTNAGC	1 cut(s)	2355
Bpu14I	TTCGAA	1 cut(s)	443
BpuEI	CTTGAG	3 cut(s)	799, 868, 2594
BpuMI	CCSGG	2 cut(s)	628, 3050
BsaAI	YACGTR	2 cut(s)	1950, 2849
BsaI	GGTCTC	2 cut(s)	2262, 2427
BsaJI	CCNNGG	5 cut(s)	667, 795, 1741, 2209, 2689
BsaWI	WCCGGW	2 cut(s)	530, 2965
BsaXI	ACNNNNNCTCC	2 cut(s)	2635, 2665
Bsc4I	CCNNNNNNNGG	2 cut(s)	2023, 2278
Bse118I	RCCGGY	1 cut(s)	2965
Bse1I	ACTGG	8 cut(s)	262, 1311, 1339, 1369, 2030, 2197, 2956, 3056
Bse3DI	GCAATG	1 cut(s)	1701
BseBI	CCWGG	3 cut(s)	1768, 2211, 2742
BseDI	CCNNGG	5 cut(s)	667, 795, 1741, 2209, 2689
BseGI	GGATG	7 cut(s)	888, 1018, 1365, 1462, 2385, 2524, 2761
BseLI	CCNNNNNNNGG	2 cut(s)	2023, 2278
BseMI	GCAATG	1 cut(s)	1701
BseMII	CTCAG	9 cut(s)	332, 333, 338, 1581, 1911, 1962, 2036, 2369, 2630
BseNI	ACTGG	8 cut(s)	262, 1311, 1339, 1369, 2030, 2197, 2956, 3056
BseRI	GAGGAG	4 cut(s)	18, 851, 2000, 2656
BseSI	GKGCMC	1 cut(s)	2464
BseXI	GCAGC	6 cut(s)	286, 952, 1385, 2166, 3073, 3095
BseYI	CCCAGC	1 cut(s)	2565
BsgI	GTGCAG	1 cut(s)	312
BshFI	GGCC	7 cut(s)	459, 626, 684, 794, 1766, 2015, 2462
BshNI	GGYRCC	1 cut(s)	125
BshTI	ACCGGT	1 cut(s)	2965
BsiHKAI	GWGCWC	2 cut(s)	77, 2808
BsiHKCI	CYCGRG	1 cut(s)	1098
BsiSI	CCGG	4 cut(s)	531, 628, 2966, 3050
BslFI	GGGAC	5 cut(s)	100, 262, 450, 2155, 2219
BslI	CCNNNNNNNGG	2 cut(s)	2023, 2278
BsmAI	GTCTC	3 cut(s)	30, 2262, 2427
BsmFI	GGGAC	5 cut(s)	100, 262, 450, 2155, 2219
BsmI	GAATGC	7 cut(s)	204, 419, 580, 812, 1132, 1530, 1756
BsnI	GGCC	7 cut(s)	459, 626, 684, 794, 1766, 2015, 2462
Bso31I	GGTCTC	2 cut(s)	2262, 2427
BsoBI	CYCGRG	1 cut(s)	1098
Bsp119I	TTCGAA	1 cut(s)	443
Bsp120I	GGGCCC	1 cut(s)	2460
Bsp1286I	GDGCHC	3 cut(s)	77, 2464, 2808
Bsp1407I	TGTACA	1 cut(s)	823
Bsp143I	GATC	9 cut(s)	949, 1093, 1961, 2026, 2569, 2788, 2866, 2983, 3052
Bsp1720I	GCTNAGC	1 cut(s)	2355
BspACI	CCGC	7 cut(s)	5, 631, 978, 1498, 1821, 2047, 2359
BspANI	GGCC	7 cut(s)	459, 626, 684, 794, 1766, 2015, 2462
BspCNI	CTCAG	9 cut(s)	331, 334, 339, 1582, 1912, 1963, 2035, 2368, 2631
BspLI	GGNNCC	8 cut(s)	127, 2016, 2028, 2207, 2208, 2462, 2868, 3054
BspMAI	CTGCAG	2 cut(s)	937, 1375
BspMI	ACCTGC	2 cut(s)	940, 1709
BspPI	GGATC	9 cut(s)	1088, 2021, 2034, 2577, 2861, 2874, 2991, 3047, 3060
BspQI	GCTCTTC	1 cut(s)	82
BspT104I	TTCGAA	1 cut(s)	443
BspT107I	GGYRCC	1 cut(s)	125
BspTI	CTTAAG	2 cut(s)	2230, 2819
BspTNI	GGTCTC	2 cut(s)	2262, 2427
BsrDI	GCAATG	1 cut(s)	1701
BsrFI	RCCGGY	1 cut(s)	2965
BsrGI	TGTACA	1 cut(s)	823
BsrI	ACTGG	8 cut(s)	262, 1311, 1339, 1369, 2030, 2197, 2956, 3056
BssAI	RCCGGY	1 cut(s)	2965
BssECI	CCNNGG	5 cut(s)	667, 795, 1741, 2209, 2689
BssMI	GATC	9 cut(s)	949, 1093, 1961, 2026, 2569, 2788, 2866, 2983, 3052
BssSI	CACGAG	1 cut(s)	268
BssT1I	CCWWGG	2 cut(s)	667, 1741
Bst2BI	CACGAG	1 cut(s)	268
Bst2UI	CCWGG	3 cut(s)	1768, 2211, 2742
Bst6I	CTCTTC	3 cut(s)	82, 440, 1059
BstAFI	CTTAAG	2 cut(s)	2230, 2819
BstAPI	GCANNNNNTGC	1 cut(s)	974
BstAUI	TGTACA	1 cut(s)	823
BstBAI	YACGTR	2 cut(s)	1950, 2849
BstBI	TTCGAA	1 cut(s)	443
BstC8I	GCNNGC	4 cut(s)	204, 1500, 2198, 2835
BstDSI	CCRYGG	2 cut(s)	795, 2689
BstF5I	GGATG	7 cut(s)	888, 1018, 1365, 1462, 2385, 2524, 2761
BstH2I	RGCGCY	1 cut(s)	2152
BstHHI	GCGC	1 cut(s)	2151
BstKTI	GATC	9 cut(s)	952, 1096, 1964, 2029, 2572, 2791, 2869, 2986, 3055
BstMAI	GTCTC	3 cut(s)	30, 2262, 2427
BstMBI	GATC	9 cut(s)	949, 1093, 1961, 2026, 2569, 2788, 2866, 2983, 3052
BstMWI	GCNNNNNNNGC	6 cut(s)	199, 974, 1136, 1231, 1265, 1925
BstNI	CCWGG	3 cut(s)	1768, 2211, 2742
BstSCI	CCNGG	5 cut(s)	626, 1766, 2209, 2740, 3048
BstSFI	CTRYAG	3 cut(s)	933, 1371, 1485
BstSLI	GKGCMC	1 cut(s)	2464
BstV1I	GCAGC	6 cut(s)	286, 952, 1385, 2166, 3073, 3095
BstV2I	GAAGAC	3 cut(s)	1062, 2461, 3066
BstX2I	RGATCY	4 cut(s)	2026, 2569, 2866, 3052
BstYI	RGATCY	4 cut(s)	2026, 2569, 2866, 3052
BsuI	GTATCC	1 cut(s)	2846
BsuRI	GGCC	7 cut(s)	459, 626, 684, 794, 1766, 2015, 2462
BtgI	CCRYGG	2 cut(s)	795, 2689
BtgZI	GCGATG	1 cut(s)	1249
BtsCI	GGATG	7 cut(s)	888, 1018, 1365, 1462, 2385, 2524, 2761
BtsI	GCAGTG	3 cut(s)	213, 1368, 1701
BveI	ACCTGC	2 cut(s)	940, 1709
Cac8I	GCNNGC	4 cut(s)	204, 1500, 2198, 2835
CaiI	CAGNNNCTG	2 cut(s)	1379, 3086
CfoI	GCGC	1 cut(s)	2151
Cfr10I	RCCGGY	1 cut(s)	2965
Cfr13I	GGNCC	7 cut(s)	625, 929, 2014, 2206, 2308, 2460, 2461
CseI	GACGC	1 cut(s)	1979
Csp6I	GTAC	3 cut(s)	126, 824, 1547
CspAI	ACCGGT	1 cut(s)	2965
CviAII	CATG	6 cut(s)	493, 599, 1619, 1860, 2132, 2153
CviQI	GTAC	3 cut(s)	126, 824, 1547
DpnI	GATC	9 cut(s)	951, 1095, 1963, 2028, 2571, 2790, 2868, 2985, 3054
DpnII	GATC	9 cut(s)	949, 1093, 1961, 2026, 2569, 2788, 2866, 2983, 3052
DriI	GACNNNNNGTC	2 cut(s)	1539, 1585
EaeI	YGGCCR	2 cut(s)	792, 1764
Eam1104I	CTCTTC	3 cut(s)	82, 440, 1059
Eam1105I	GACNNNNNGTC	2 cut(s)	1539, 1585
EarI	CTCTTC	3 cut(s)	82, 440, 1059
Eco130I	CCWWGG	2 cut(s)	667, 1741
Eco147I	AGGCCT	1 cut(s)	459
Eco24I	GRGCYC	1 cut(s)	2464
Eco31I	GGTCTC	2 cut(s)	2262, 2427
Eco32I	GATATC	1 cut(s)	2524
Eco47I	GGWCC	3 cut(s)	929, 2206, 2308
Eco57I	CTGAAG	4 cut(s)	435, 1083, 1836, 3063
Eco72I	CACGTG	1 cut(s)	1950
Eco88I	CYCGRG	1 cut(s)	1098
EcoO109I	RGGNCCY	4 cut(s)	2014, 2206, 2308, 2461
EcoRI	GAATTC	1 cut(s)	1611
EcoRII	CCWGG	3 cut(s)	1766, 2209, 2740
EcoRV	GATATC	1 cut(s)	2524
EcoT14I	CCWWGG	2 cut(s)	667, 1741
EcoT22I	ATGCAT	2 cut(s)	580, 812
EcoT38I	GRGCYC	1 cut(s)	2464
ErhI	CCWWGG	2 cut(s)	667, 1741
FaeI	CATG	6 cut(s)	496, 602, 1622, 1863, 2135, 2156
FalI	AAGNNNNNCTT	8 cut(s)	104, 136, 424, 456, 1176, 1208, 2792, 2824
FaqI	GGGAC	5 cut(s)	100, 262, 450, 2155, 2219
FatI	CATG	6 cut(s)	492, 598, 1618, 1859, 2131, 2152
FauI	CCCGC	2 cut(s)	624, 1491
FauNDI	CATATG	1 cut(s)	820
FblI	GTMKAC	2 cut(s)	2085, 2442
Fnu4HI	GCNGC	8 cut(s)	6, 275, 966, 978, 1374, 2180, 3084, 3087
FokI	GGATG	7 cut(s)	875, 1025, 1372, 1469, 2372, 2531, 2768
FriOI	GRGCYC	1 cut(s)	2464
Fsp4HI	GCNGC	8 cut(s)	6, 275, 966, 978, 1374, 2180, 3084, 3087
FspBI	CTAG	8 cut(s)	101, 945, 1521, 1563, 1688, 2060, 2345, 3102
GlaI	GCGC	1 cut(s)	2150
GluI	GCNGC	8 cut(s)	6, 275, 966, 978, 1374, 2180, 3084, 3087
GsaI	CCCAGC	1 cut(s)	2569
GsuI	CTGGAG	1 cut(s)	1322
HaeII	RGCGCY	1 cut(s)	2152
HaeIII	GGCC	7 cut(s)	459, 626, 684, 794, 1766, 2015, 2462
HapII	CCGG	4 cut(s)	531, 628, 2966, 3050
HgaI	GACGC	1 cut(s)	1979
HhaI	GCGC	1 cut(s)	2151
Hin1II	CATG	6 cut(s)	496, 602, 1622, 1863, 2135, 2156
Hin6I	GCGC	1 cut(s)	2149
HinP1I	GCGC	1 cut(s)	2149
HincII	GTYRAC	2 cut(s)	1945, 3061
HindII	GTYRAC	2 cut(s)	1945, 3061
HindIII	AAGCTT	4 cut(s)	83, 1409, 1775, 2885
HpaI	GTTAAC	1 cut(s)	3061
HpaII	CCGG	4 cut(s)	531, 628, 2966, 3050
HphI	GGTGA	5 cut(s)	38, 46, 57, 1244, 1879
Hpy166II	GTNNAC	8 cut(s)	267, 710, 1165, 1209, 1945, 2086, 2443, 3061
Hpy8I	GTNNAC	8 cut(s)	267, 710, 1165, 1209, 1945, 2086, 2443, 3061
Hpy99I	CGWCG	2 cut(s)	198, 2688
HpyCH4IV	ACGT	4 cut(s)	376, 747, 1949, 2848
HpyF10VI	GCNNNNNNNGC	6 cut(s)	199, 974, 1136, 1231, 1265, 1925
HpySE526I	ACGT	4 cut(s)	376, 747, 1949, 2848
Hsp92II	CATG	6 cut(s)	496, 602, 1622, 1863, 2135, 2156
HspAI	GCGC	1 cut(s)	2149
KflI	GGGWCCC	1 cut(s)	2206
KpnI	GGTACC	1 cut(s)	129
KspAI	GTTAAC	1 cut(s)	3061
Kzo9I	GATC	9 cut(s)	949, 1093, 1961, 2026, 2569, 2788, 2866, 2983, 3052
LguI	GCTCTTC	1 cut(s)	82
LmnI	GCTCC	4 cut(s)	838, 1987, 2643, 2803
Lsp1109I	GCAGC	6 cut(s)	286, 952, 1385, 2166, 3073, 3095
LweI	GCATC	6 cut(s)	49, 1121, 1776, 2319, 2539, 2746
MaeI	CTAG	8 cut(s)	101, 945, 1521, 1563, 1688, 2060, 2345, 3102
MaeII	ACGT	4 cut(s)	376, 747, 1949, 2848
MalI	GATC	9 cut(s)	951, 1095, 1963, 2028, 2571, 2790, 2868, 2985, 3054
MboI	GATC	9 cut(s)	949, 1093, 1961, 2026, 2569, 2788, 2866, 2983, 3052
MfeI	CAATTG	2 cut(s)	1422, 2316
MflI	RGATCY	4 cut(s)	2026, 2569, 2866, 3052
MhlI	GDGCHC	3 cut(s)	77, 2464, 2808
MlsI	TGGCCA	2 cut(s)	794, 1766
MluNI	TGGCCA	2 cut(s)	794, 1766
MlyI	GAGTC	8 cut(s)	32, 272, 401, 1052, 1469, 1574, 2330, 3080
MmeI	TCCRAC	2 cut(s)	502, 1588
Mox20I	TGGCCA	2 cut(s)	794, 1766
Mph1103I	ATGCAT	2 cut(s)	580, 812
MroXI	GAANNNNTTC	2 cut(s)	1068, 1149
MscI	TGGCCA	2 cut(s)	794, 1766
MseI	TTAA	9 cut(s)	581, 1413, 1806, 1967, 2231, 2285, 2420, 2820, 3060
MslI	CAYNNNNRTG	4 cut(s)	16, 18, 51, 70
Msp20I	TGGCCA	2 cut(s)	794, 1766
MspA1I	CMGCKG	4 cut(s)	2120, 2179, 2359, 3086
MspCI	CTTAAG	2 cut(s)	2230, 2819
MspI	CCGG	4 cut(s)	531, 628, 2966, 3050
MspR9I	CCNGG	5 cut(s)	628, 1768, 2211, 2742, 3050
MunI	CAATTG	2 cut(s)	1422, 2316
Mva1269I	GAATGC	7 cut(s)	204, 419, 580, 812, 1132, 1530, 1756
MvaI	CCWGG	3 cut(s)	1768, 2211, 2742
MwoI	GCNNNNNNNGC	6 cut(s)	199, 974, 1136, 1231, 1265, 1925
NciI	CCSGG	2 cut(s)	628, 3050
NdeI	CATATG	1 cut(s)	820
NdeII	GATC	9 cut(s)	949, 1093, 1961, 2026, 2569, 2788, 2866, 2983, 3052
NlaIII	CATG	6 cut(s)	496, 602, 1622, 1863, 2135, 2156
NlaIV	GGNNCC	8 cut(s)	127, 2016, 2028, 2207, 2208, 2462, 2868, 3054
NmeAIII	GCCGAG	1 cut(s)	2189
NmuCI	GTSAC	5 cut(s)	63, 734, 1577, 1696, 3022
NsiI	ATGCAT	2 cut(s)	580, 812
NspV	TTCGAA	1 cut(s)	443
OliI	CACNNNNGTG	3 cut(s)	16, 51, 70
PceI	AGGCCT	1 cut(s)	459
PciSI	GCTCTTC	1 cut(s)	82
PcsI	WCGNNNNNNNCGW	2 cut(s)	190, 2692
PctI	GAATGC	7 cut(s)	204, 419, 580, 812, 1132, 1530, 1756
PdmI	GAANNNNTTC	2 cut(s)	1068, 1149
PfeI	GAWTC	6 cut(s)	338, 401, 884, 1069, 2156, 2468
PflFI	GACNNNGTC	1 cut(s)	2438
PinAI	ACCGGT	1 cut(s)	2965
PkrI	GCNGC	8 cut(s)	7, 276, 967, 979, 1375, 2181, 3085, 3088
PleI	GAGTC	8 cut(s)	31, 271, 400, 1052, 1468, 1574, 2329, 3079
PmaCI	CACGTG	1 cut(s)	1950
PmlI	CACGTG	1 cut(s)	1950
PpsI	GAGTC	8 cut(s)	31, 271, 400, 1052, 1468, 1574, 2329, 3079
Ppu21I	YACGTR	2 cut(s)	1950, 2849
PpuMI	RGGWCCY	2 cut(s)	2206, 2308
PshBI	ATTAAT	1 cut(s)	581
PsiI	TTATAA	2 cut(s)	960, 2492
Psp5II	RGGWCCY	2 cut(s)	2206, 2308
Psp6I	CCWGG	3 cut(s)	1766, 2209, 2740
PspCI	CACGTG	1 cut(s)	1950
PspFI	CCCAGC	1 cut(s)	2565
PspGI	CCWGG	3 cut(s)	1766, 2209, 2740
PspN4I	GGNNCC	8 cut(s)	127, 2016, 2028, 2207, 2208, 2462, 2868, 3054
PspOMI	GGGCCC	1 cut(s)	2460
PspPI	GGNCC	7 cut(s)	625, 929, 2014, 2206, 2308, 2460, 2461
PspPPI	RGGWCCY	2 cut(s)	2206, 2308
PsrI	GAACNNNNNNTAC	2 cut(s)	845, 877
PstI	CTGCAG	2 cut(s)	937, 1375
PstNI	CAGNNNCTG	2 cut(s)	1379, 3086
PsuI	RGATCY	4 cut(s)	2026, 2569, 2866, 3052
PsyI	GACNNNGTC	1 cut(s)	2438
PvuII	CAGCTG	3 cut(s)	2120, 2179, 3086
RsaI	GTAC	3 cut(s)	127, 825, 1548
RsaNI	GTAC	3 cut(s)	126, 824, 1547
RseI	CAYNNNNRTG	4 cut(s)	16, 18, 51, 70
SapI	GCTCTTC	1 cut(s)	82
SaqAI	TTAA	9 cut(s)	581, 1413, 1806, 1967, 2231, 2285, 2420, 2820, 3060
SatI	GCNGC	8 cut(s)	6, 275, 966, 978, 1374, 2180, 3084, 3087
Sau3AI	GATC	9 cut(s)	949, 1093, 1961, 2026, 2569, 2788, 2866, 2983, 3052
Sau96I	GGNCC	7 cut(s)	625, 929, 2014, 2206, 2308, 2460, 2461
SchI	GAGTC	8 cut(s)	32, 272, 401, 1052, 1469, 1574, 2330, 3080
ScrFI	CCNGG	5 cut(s)	628, 1768, 2211, 2742, 3050
SduI	GDGCHC	3 cut(s)	77, 2464, 2808
SfaNI	GCATC	6 cut(s)	49, 1121, 1776, 2319, 2539, 2746
SfcI	CTRYAG	3 cut(s)	933, 1371, 1485
SfuI	TTCGAA	1 cut(s)	443
SinI	GGWCC	3 cut(s)	929, 2206, 2308
SmiMI	CAYNNNNRTG	4 cut(s)	16, 18, 51, 70
SmlI	CTYRAG	5 cut(s)	778, 847, 2230, 2573, 2819
SmoI	CTYRAG	5 cut(s)	778, 847, 2230, 2573, 2819
SpeI	ACTAGT	1 cut(s)	1562
SseBI	AGGCCT	1 cut(s)	459
SsiI	CCGC	7 cut(s)	5, 631, 978, 1498, 1821, 2047, 2359
SspI	AATATT	3 cut(s)	2539, 2603, 2785
SspMI	CTAG	8 cut(s)	101, 945, 1521, 1563, 1688, 2060, 2345, 3102
StuI	AGGCCT	1 cut(s)	459
StyD4I	CCNGG	5 cut(s)	626, 1766, 2209, 2740, 3048
StyI	CCWWGG	2 cut(s)	667, 1741
TaiI	ACGT	4 cut(s)	379, 750, 1952, 2851
TaqI	TCGA	6 cut(s)	184, 443, 1216, 1723, 2188, 2727
TatI	WGTACW	2 cut(s)	823, 1546
TauI	GCSGC	2 cut(s)	8, 980
TfiI	GAWTC	6 cut(s)	338, 401, 884, 1069, 2156, 2468
Tru1I	TTAA	9 cut(s)	581, 1413, 1806, 1967, 2231, 2285, 2420, 2820, 3060
Tru9I	TTAA	9 cut(s)	581, 1413, 1806, 1967, 2231, 2285, 2420, 2820, 3060
TseFI	GTSAC	5 cut(s)	63, 734, 1577, 1696, 3022
TseI	GCWGC	6 cut(s)	274, 965, 1373, 2179, 3083, 3086
Tsp45I	GTSAC	5 cut(s)	63, 734, 1577, 1696, 3022
TspGWI	ACGGA	2 cut(s)	812, 1875
Tth111I	GACNNNGTC	1 cut(s)	2438
Vha464I	CTTAAG	2 cut(s)	2230, 2819
VpaK11BI	GGWCC	3 cut(s)	929, 2206, 2308
VspI	ATTAAT	1 cut(s)	581
XapI	RAATTY	4 cut(s)	1327, 1391, 1611, 1757
XbaI	TCTAGA	2 cut(s)	1520, 2059
XcmI	CCANNNNNNNNNTGG	2 cut(s)	485, 1857
XmiI	GTMKAC	2 cut(s)	2085, 2442
XmnI	GAANNNNTTC	2 cut(s)	1068, 1149
XspI	CTAG	8 cut(s)	101, 945, 1521, 1563, 1688, 2060, 2345, 3102
Zsp2I	ATGCAT	2 cut(s)	580, 812

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.