AT4G04720

Calcium-dependent protein kinase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Reverse (-)
2393653 .. 2397804
4152 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G04720.2

Sequence Viewer

Length: 1596 bp
ATGGGTTGCTTCAGCAGTAAACACCGGAAAACTCAAAACGACGGCGGAGAAAAATCAATCCCGATCAATCCAGTTCAAACCCATGTAGTCCCCGAGCATCGTAAACCTCAAACCCCAACACCAAAACCCATGACTCAACCAATCCATCAGCAGATTTCAACACCGTCTTCAAATCCAGTCTCAGTTCGAGATCCAGATACGATTTTAGGTAAACCATTCGAAGACATCAGGAAATTTTACAGCTTGGGGAAAGAATTAGGTCGAGGTCAATTTGGGATTACGTATATGTGTAAAGAGATTGGTACTGGTAACACTTATGCTTGCAAATCGATTCTTAAGAGGAAGCTAATTAGTAAGCAAGATAAAGAAGATGTGAAGAGAGAGATTCAGATAATGCAGTATTTGTCTGGACAACCTAACATTGTTGAGATCAAAGGTGCTTATGAAGATAGACAATCTATACATTTGGTTATGGAGTTGTGTGCTGGTGGTGAGTTGTTTGATAGGATTATAGCTCAAGGTCATTACTCTGAGAGAGCTGCTGCTGGTATCATTAGGTCTATTGTCAATGTTGTTCAGATTTGTCATTTTATGGGTGTGGTTCATCGAGATCTCAAGCCTGAGAATTTCTTGCTTTCGAGTAAAGAGGAGAATGCTATGCTTAAAGCTACTGATTTCGGTTTGTCCGTCTTCATCGAAGAAGGAAAAGTTTACCGGGATATAGTTGGGAGTGCTTACTACGTTGCTCCAGAAGTATTAAGGCGAAGTTACGGAAAAGAAATCGACATTTGGAGTGCAGGTGTCATTTTATACATCCTACTCAGCGGTGTACCTCCTTTTTGGGCCGAAAATGAGAAAGGAATATTCGATGAGGTCATAAAAGGCGAAATTGATTTTGTAAGTGAGCCATGGCCTTCTATATCTGAAAGCGCGAAAGATCTTGTTAGGAAGATGCTAACCAAAGACCCGAAGAGACGAATCACGGCTGCACAGGTTCTTGAACATCCTTGGATCAAAGGGGGAGAAGCACCAGACAAGCCTATTGATAGCGCTGTGTTATCCCGCATGAAGCAATTCCGAGCAATGAACAAGCTTAAGAAGCTAGCTCTAAAGGTTATCGCGGAGAGTCTATCAGAAGAGGAGATTAAAGGTCTTAAAACCATGTTTGCGAATATAGATACCGACAAAAGCGGGACAATCACTTATGAAGAACTCAAAACTGGGCTAACTAGACTTGGGTCTAGACTCTCGGAAACTGAAGTTAAGCAACTCATGGAAGCCGCTGACGTCGATGGTAATGGAACAATCGACTACTACGAGTTTATCTCTGCGACAATGCATAGATACAAATTAGATCGAGATGAGCATGTATACAAAGCATTCCAACACTTTGATAAAGACAACAGCGGGCACATAACTAGAGATGAGTTGGAAAGTGCCATGAAGGAATATGGAATGGGAGATGAAGCTAGCATCAAAGAAGTTATATCCGAAGTTGATACCGACAATGATGGAAGAATAAACTTTGAAGAATTTTGCGCGATGATGAGAAGTGGCAGCACGCAGCCACAGGGGAAACTGCTTCCATTCCATTGA

Protein Analysis

531

Amino Acids

59.89

Weight (kDa)

6.21

Isoelectric Point (pI)

36.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 80 - 338 4e-77 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 82 - 334 8e-28 Protein tyrosine and serine/threonine kinase
EF-hand_7 PF13499 384 - 445 8.2e-14 EF-hand domain pair
EF-hand_1 PF00036 385 - 412 1.8e-06 EF hand domain
EF-hand_8 PF13833 397 - 445 7.6e-06 EF-hand domain pair
EF-hand_7 PF13499 455 - 517 1.4e-17 EF-hand domain pair
EF-hand_1 PF00036 457 - 483 2.1e-07 EF hand domain
EF-hand_6 PF13405 458 - 485 3e-07 EF-hand domain
EF-hand_8 PF13833 469 - 517 3.7e-09 EF-hand domain pair
EF-hand_1 PF00036 492 - 518 6.3e-09 EF hand domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 788
AatII GACGTC 1 cut(s) 1290
Acc36I ACCTGC 1 cut(s) 788
AccI GTMKAC 1 cut(s) 1371
AccII CGCG 3 cut(s) 932, 1121, 1541
AciI CCGC 7 cut(s) 45, 825, 1063, 1121, 1191, 1281, 1407
AclWI GGATC 2 cut(s) 185, 1019
AcsI RAATTY 3 cut(s) 233, 625, 1532
AcuI CTGAAG 1 cut(s) 1278
AcyI GRCGYC 1 cut(s) 1287
AfaI GTAC 2 cut(s) 304, 831
AfeI AGCGCT 1 cut(s) 1051
AflII CTTAAG 2 cut(s) 335, 1094
AgsI TTSAA 5 cut(s) 77, 159, 171, 1001, 1529
AluBI AGCT 9 cut(s) 243, 346, 515, 539, 668, 1093, 1102, 1106, 1469
AluI AGCT 9 cut(s) 243, 346, 515, 539, 668, 1093, 1102, 1106, 1469
Alw26I GTCTC 2 cut(s) 184, 967
AlwI GGATC 2 cut(s) 185, 1019
Ama87I CYCGRG 1 cut(s) 92
Aor51HI AGCGCT 1 cut(s) 1051
AoxI GGCC 2 cut(s) 843, 911
ApeKI GCWGC 5 cut(s) 539, 542, 986, 1557, 1564
ApoI RAATTY 3 cut(s) 233, 625, 1532
Asp700I GAANNNNTTC 1 cut(s) 1073
AspLEI GCGC 3 cut(s) 932, 1052, 1541
AspS9I GGNCC 1 cut(s) 843
AsuC2I CCSGG 1 cut(s) 716
AsuHPI GGTGA 1 cut(s) 503
AsuII TTCGAA 1 cut(s) 219
AsuNHI GCTAGC 2 cut(s) 1102, 1469
AvaI CYCGRG 1 cut(s) 92
BaeGI GKGCMC 1 cut(s) 1413
BbsI GAAGAC 3 cut(s) 159, 228, 682
BbvI GCAGC 5 cut(s) 526, 529, 973, 1569, 1576
BccI CCATC 3 cut(s) 153, 1286, 1505
BceAI ACGGC 2 cut(s) 58, 999
BcnI CCSGG 1 cut(s) 716
BcoDI GTCTC 2 cut(s) 184, 967
BfaI CTAG 5 cut(s) 1103, 1230, 1242, 1419, 1470
BfoI RGCGCY 1 cut(s) 1053
BfrI CTTAAG 2 cut(s) 335, 1094
BfuAI ACCTGC 1 cut(s) 788
BglII AGATCT 2 cut(s) 610, 937
BisI GCNGC 6 cut(s) 540, 543, 987, 1281, 1558, 1565
BlsI GCNGC 6 cut(s) 541, 544, 988, 1282, 1559, 1566
Bme1390I CCNGG 1 cut(s) 716
BmeT110I CYCGRG 1 cut(s) 92
BmgT120I GGNCC 1 cut(s) 843
BmrFI CCNGG 1 cut(s) 716
BmrI ACTGGG 1 cut(s) 1230
BmsI GCATC 3 cut(s) 106, 942, 1482
BmtI GCTAGC 2 cut(s) 1106, 1473
BmuI ACTGGG 1 cut(s) 1230
BoxI GACNNNNGTC 1 cut(s) 1237
BpiI GAAGAC 3 cut(s) 159, 228, 682
BplI GAGNNNNNCTC 2 cut(s) 1310, 1342
BpmI CTGGAG 1 cut(s) 732
Bpu14I TTCGAA 1 cut(s) 219
BpuEI CTTGAG 2 cut(s) 501, 599
BpuMI CCSGG 1 cut(s) 716
Bsa29I ATCGAT 1 cut(s) 329
BsaAI YACGTR 1 cut(s) 282
BsaHI GRCGYC 1 cut(s) 1287
BsaJI CCNNGG 2 cut(s) 908, 1007
BsaWI WCCGGW 1 cut(s) 24
BsaXI ACNNNNNCTCC 2 cut(s) 784, 814
Bse1I ACTGG 4 cut(s) 71, 176, 310, 1225
Bse3DI GCAATG 1 cut(s) 1089
BseCI ATCGAT 1 cut(s) 329
BseDI CCNNGG 2 cut(s) 908, 1007
BseGI GGATG 2 cut(s) 813, 1003
BseMI GCAATG 1 cut(s) 1089
BseMII CTCAG 4 cut(s) 195, 522, 612, 835
BseNI ACTGG 4 cut(s) 71, 176, 310, 1225
BseRI GAGGAG 2 cut(s) 662, 1154
BseSI GKGCMC 1 cut(s) 1413
BseXI GCAGC 5 cut(s) 526, 529, 973, 1569, 1576
BsgI GTGCAG 2 cut(s) 816, 972
Bsh1236I CGCG 3 cut(s) 932, 1121, 1541
BshFI GGCC 2 cut(s) 845, 913
BshVI ATCGAT 1 cut(s) 329
BsiHKCI CYCGRG 1 cut(s) 92
BsiSI CCGG 2 cut(s) 25, 715
BslFI GGGAC 2 cut(s) 74, 1207
BsmAI GTCTC 2 cut(s) 184, 967
BsmBI CGTCTC 1 cut(s) 967
BsmFI GGGAC 2 cut(s) 74, 1207
BsmI GAATGC 2 cut(s) 658, 1379
BsnI GGCC 2 cut(s) 845, 913
BsoBI CYCGRG 1 cut(s) 92
Bsp119I TTCGAA 1 cut(s) 219
Bsp1286I GDGCHC 1 cut(s) 1413
Bsp143I GATC 7 cut(s) 63, 190, 429, 610, 937, 1011, 1354
Bsp19I CCATGG 1 cut(s) 908
BspACI CCGC 7 cut(s) 45, 825, 1063, 1121, 1191, 1281, 1407
BspANI GGCC 2 cut(s) 845, 913
BspCNI CTCAG 4 cut(s) 194, 523, 613, 834
BspDI ATCGAT 1 cut(s) 329
BspFNI CGCG 3 cut(s) 932, 1121, 1541
BspMI ACCTGC 1 cut(s) 788
BspOI GCTAGC 2 cut(s) 1106, 1473
BspPI GGATC 2 cut(s) 185, 1019
BspT104I TTCGAA 1 cut(s) 219
BspTI CTTAAG 2 cut(s) 335, 1094
BsrDI GCAATG 1 cut(s) 1089
BsrI ACTGG 4 cut(s) 71, 176, 310, 1225
BssECI CCNNGG 2 cut(s) 908, 1007
BssMI GATC 7 cut(s) 63, 190, 429, 610, 937, 1011, 1354
BssNAI GTATAC 1 cut(s) 1372
BssNI GRCGYC 1 cut(s) 1287
BssT1I CCWWGG 2 cut(s) 908, 1007
Bst1107I GTATAC 1 cut(s) 1372
Bst4CI ACNGT 1 cut(s) 165
Bst6I CTCTTC 3 cut(s) 371, 965, 1131
BstACI GRCGYC 1 cut(s) 1287
BstAFI CTTAAG 2 cut(s) 335, 1094
BstBAI YACGTR 1 cut(s) 282
BstBI TTCGAA 1 cut(s) 219
BstC8I GCNNGC 5 cut(s) 322, 1104, 1409, 1471, 1562
BstDEI CTNAG 4 cut(s) 181, 531, 621, 821
BstDSI CCRYGG 1 cut(s) 908
BstF5I GGATG 2 cut(s) 813, 1003
BstFNI CGCG 3 cut(s) 932, 1121, 1541
BstH2I RGCGCY 1 cut(s) 1053
BstHHI GCGC 3 cut(s) 932, 1052, 1541
BstKTI GATC 7 cut(s) 66, 193, 432, 613, 940, 1014, 1357
BstMAI GTCTC 2 cut(s) 184, 967
BstMBI GATC 7 cut(s) 63, 190, 429, 610, 937, 1011, 1354
BstMWI GCNNNNNNNGC 1 cut(s) 1099
BstNSI RCATGY 1 cut(s) 1370
BstPAI GACNNNNGTC 1 cut(s) 1237
BstSCI CCNGG 1 cut(s) 714
BstSLI GKGCMC 1 cut(s) 1413
BstSNI TACGTA 1 cut(s) 282
BstUI CGCG 3 cut(s) 932, 1121, 1541
BstV1I GCAGC 5 cut(s) 526, 529, 973, 1569, 1576
BstV2I GAAGAC 3 cut(s) 159, 228, 682
BstX2I RGATCY 3 cut(s) 190, 610, 937
BstYI RGATCY 3 cut(s) 190, 610, 937
BstZ17I GTATAC 1 cut(s) 1372
Bsu15I ATCGAT 1 cut(s) 329
BsuRI GGCC 2 cut(s) 845, 913
BsuTUI ATCGAT 1 cut(s) 329
BtgI CCRYGG 1 cut(s) 908
BtgZI GCGATG 1 cut(s) 1556
BtsCI GGATG 2 cut(s) 813, 1003
BveI ACCTGC 1 cut(s) 788
Cac8I GCNNGC 5 cut(s) 322, 1104, 1409, 1471, 1562
CfoI GCGC 3 cut(s) 932, 1052, 1541
Cfr13I GGNCC 1 cut(s) 843
ClaI ATCGAT 1 cut(s) 329
Csp6I GTAC 2 cut(s) 303, 830
CviAII CATG 8 cut(s) 83, 130, 909, 1066, 1162, 1273, 1367, 1441
CviQI GTAC 2 cut(s) 303, 830
DdeI CTNAG 4 cut(s) 181, 531, 621, 821
DpnI GATC 7 cut(s) 65, 192, 431, 612, 939, 1013, 1356
DpnII GATC 7 cut(s) 63, 190, 429, 610, 937, 1011, 1354
Eam1104I CTCTTC 3 cut(s) 371, 965, 1131
EarI CTCTTC 3 cut(s) 371, 965, 1131
EciI GGCGGA 1 cut(s) 60
Eco105I TACGTA 1 cut(s) 282
Eco130I CCWWGG 2 cut(s) 908, 1007
Eco47III AGCGCT 1 cut(s) 1051
Eco57I CTGAAG 1 cut(s) 1278
Eco88I CYCGRG 1 cut(s) 92
EcoT14I CCWWGG 2 cut(s) 908, 1007
EcoT22I ATGCAT 1 cut(s) 1341
ErhI CCWWGG 2 cut(s) 908, 1007
Esp3I CGTCTC 1 cut(s) 967
FaeI CATG 8 cut(s) 86, 133, 912, 1069, 1165, 1276, 1370, 1444
FaqI GGGAC 2 cut(s) 74, 1207
FatI CATG 8 cut(s) 82, 129, 908, 1065, 1161, 1272, 1366, 1440
FauI CCCGC 3 cut(s) 1070, 1184, 1400
FblI GTMKAC 1 cut(s) 1371
Fnu4HI GCNGC 6 cut(s) 540, 543, 987, 1281, 1558, 1565
FokI GGATG 2 cut(s) 800, 990
Fsp4HI GCNGC 6 cut(s) 540, 543, 987, 1281, 1558, 1565
FspBI CTAG 5 cut(s) 1103, 1230, 1242, 1419, 1470
GlaI GCGC 3 cut(s) 931, 1051, 1540
GluI GCNGC 6 cut(s) 540, 543, 987, 1281, 1558, 1565
GsuI CTGGAG 1 cut(s) 732
HaeII RGCGCY 1 cut(s) 1053
HaeIII GGCC 2 cut(s) 845, 913
HapII CCGG 2 cut(s) 25, 715
HhaI GCGC 3 cut(s) 932, 1052, 1541
Hin1I GRCGYC 1 cut(s) 1287
Hin1II CATG 8 cut(s) 86, 133, 912, 1069, 1165, 1276, 1370, 1444
Hin6I GCGC 3 cut(s) 930, 1050, 1539
HinP1I GCGC 3 cut(s) 930, 1050, 1539
HindIII AAGCTT 1 cut(s) 1091
HinfI GANTC 6 cut(s) 133, 331, 385, 978, 1126, 1245
HpaII CCGG 2 cut(s) 25, 715
HphI GGTGA 1 cut(s) 503
Hpy166II GTNNAC 6 cut(s) 20, 104, 212, 712, 830, 1372
Hpy188I TCNGA 8 cut(s) 390, 532, 579, 925, 1079, 1135, 1252, 1492
Hpy8I GTNNAC 6 cut(s) 20, 104, 212, 712, 830, 1372
Hpy99I CGWCG 2 cut(s) 44, 1292
HpyAV CCTTC 3 cut(s) 695, 924, 1438
HpyCH4III ACNGT 1 cut(s) 165
HpyCH4IV ACGT 3 cut(s) 281, 741, 1287
HpyCH4V TGCA 5 cut(s) 324, 397, 797, 989, 1339
HpyF10VI GCNNNNNNNGC 1 cut(s) 1099
HpyF3I CTNAG 4 cut(s) 181, 531, 621, 821
HpySE526I ACGT 3 cut(s) 281, 741, 1287
Hsp92I GRCGYC 1 cut(s) 1287
Hsp92II CATG 8 cut(s) 86, 133, 912, 1069, 1165, 1276, 1370, 1444
HspAI GCGC 3 cut(s) 930, 1050, 1539
Kzo9I GATC 7 cut(s) 63, 190, 429, 610, 937, 1011, 1354
LmnI GCTCC 1 cut(s) 751
Lsp1109I GCAGC 5 cut(s) 526, 529, 973, 1569, 1576
LweI GCATC 3 cut(s) 106, 942, 1482
MaeI CTAG 5 cut(s) 1103, 1230, 1242, 1419, 1470
MaeII ACGT 3 cut(s) 281, 741, 1287
MaeIII GTNAC 2 cut(s) 308, 767
MalI GATC 7 cut(s) 65, 192, 431, 612, 939, 1013, 1356
MboI GATC 7 cut(s) 63, 190, 429, 610, 937, 1011, 1354
MflI RGATCY 3 cut(s) 190, 610, 937
MhlI GDGCHC 1 cut(s) 1413
MluCI AATT 9 cut(s) 233, 254, 269, 348, 625, 888, 1073, 1349, 1532
MlyI GAGTC 3 cut(s) 127, 1135, 1239
MmeI TCCRAC 2 cut(s) 1408, 1410
MnlI CCTC 7 cut(s) 117, 257, 333, 640, 843, 865, 1132
Mph1103I ATGCAT 1 cut(s) 1341
MroXI GAANNNNTTC 1 cut(s) 1073
MseI TTAA 7 cut(s) 336, 663, 758, 1095, 1146, 1155, 1263
MspA1I CMGCKG 3 cut(s) 825, 1283, 1407
MspCI CTTAAG 2 cut(s) 335, 1094
MspI CCGG 2 cut(s) 25, 715
MspR9I CCNGG 1 cut(s) 716
Mva1269I GAATGC 2 cut(s) 658, 1379
MvnI CGCG 3 cut(s) 932, 1121, 1541
MwoI GCNNNNNNNGC 1 cut(s) 1099
NciI CCSGG 1 cut(s) 716
NcoI CCATGG 1 cut(s) 908
NdeII GATC 7 cut(s) 63, 190, 429, 610, 937, 1011, 1354
NheI GCTAGC 2 cut(s) 1102, 1469
NlaIII CATG 8 cut(s) 86, 133, 912, 1069, 1165, 1276, 1370, 1444
NsiI ATGCAT 1 cut(s) 1341
NspI RCATGY 1 cut(s) 1370
NspV TTCGAA 1 cut(s) 219
PaqCI CACCTGC 1 cut(s) 788
PcsI WCGNNNNNNNCGW 2 cut(s) 684, 1314
PctI GAATGC 2 cut(s) 658, 1379
PdmI GAANNNNTTC 1 cut(s) 1073
PfeI GAWTC 3 cut(s) 331, 385, 978
PkrI GCNGC 6 cut(s) 541, 544, 988, 1282, 1559, 1566
PleI GAGTC 3 cut(s) 127, 1134, 1239
PpsI GAGTC 3 cut(s) 127, 1134, 1239
Ppu21I YACGTR 1 cut(s) 282
PshAI GACNNNNGTC 1 cut(s) 1237
PspPI GGNCC 1 cut(s) 843
PsuI RGATCY 3 cut(s) 190, 610, 937
RsaI GTAC 2 cut(s) 304, 831
RsaNI GTAC 2 cut(s) 303, 830
SaqAI TTAA 7 cut(s) 336, 663, 758, 1095, 1146, 1155, 1263
SatI GCNGC 6 cut(s) 540, 543, 987, 1281, 1558, 1565
Sau3AI GATC 7 cut(s) 63, 190, 429, 610, 937, 1011, 1354
Sau96I GGNCC 1 cut(s) 843
SchI GAGTC 3 cut(s) 127, 1135, 1239
ScrFI CCNGG 1 cut(s) 716
SduI GDGCHC 1 cut(s) 1413
SfaNI GCATC 3 cut(s) 106, 942, 1482
SfuI TTCGAA 1 cut(s) 219
SmlI CTYRAG 4 cut(s) 335, 516, 614, 1094
SmoI CTYRAG 4 cut(s) 335, 516, 614, 1094
SnaBI TACGTA 1 cut(s) 282
Sse9I AATT 9 cut(s) 233, 254, 269, 348, 625, 888, 1073, 1349, 1532
SsiI CCGC 7 cut(s) 45, 825, 1063, 1121, 1191, 1281, 1407
SspI AATATT 1 cut(s) 864
SspMI CTAG 5 cut(s) 1103, 1230, 1242, 1419, 1470
StyD4I CCNGG 1 cut(s) 714
StyI CCWWGG 2 cut(s) 908, 1007
TaaI ACNGT 1 cut(s) 165
TaiI ACGT 3 cut(s) 284, 744, 1290
TasI AATT 9 cut(s) 233, 254, 269, 348, 625, 888, 1073, 1349, 1532
TauI GCSGC 1 cut(s) 1283
TfiI GAWTC 3 cut(s) 331, 385, 978
Tru1I TTAA 7 cut(s) 336, 663, 758, 1095, 1146, 1155, 1263
Tru9I TTAA 7 cut(s) 336, 663, 758, 1095, 1146, 1155, 1263
TseI GCWGC 5 cut(s) 539, 542, 986, 1557, 1564
TspDTI ATGAA 8 cut(s) 459, 593, 682, 1082, 1100, 1221, 1457, 1479
TspGWI ACGGA 2 cut(s) 676, 786
Vha464I CTTAAG 2 cut(s) 335, 1094
XapI RAATTY 3 cut(s) 233, 625, 1532
XbaI TCTAGA 1 cut(s) 1241
XceI RCATGY 1 cut(s) 1370
XmiI GTMKAC 1 cut(s) 1371
XmnI GAANNNNTTC 1 cut(s) 1073
XspI CTAG 5 cut(s) 1103, 1230, 1242, 1419, 1470
ZraI GACGTC 1 cut(s) 1288
Zsp2I ATGCAT 1 cut(s) 1341
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.