Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0002696

Physical Location & Seq

Genomic Coordinates Reverse (-)

1864830 .. 1868178

Gene Structure 3349 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000031086

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1602 bp

ATGGGTTGCTGTGGCAGCAAGACCAAACCCAATAATGGGTATGTCTCCTCATCCATACCCATCTCTCACCACCACCCACAACAGCAATCCCTGTCTGTCTCAACCCAGCAACCTCACAAAGTTTCAGCCCCTCCAACCCATAACCCACCTCCACCACCCCAACCCCAACCACCAAAGCCACACCCACAGCCAGTGAAGCCAGCAGTGCCGCCAAACAGCATTCTTGACAAGCCCTTTGATGACATTAAGCAGTACTACACTCTGGGCAAAGAACTGGGCAGAGGCCAATTTGGGATCACGTACTTGTGCACAGAGAAGTCTACGGGTGATACATATGCCTGCAAGTCGATCTTGAAGCGCAAGCTGGTGAGTAAAAGTGATAGGGATGATATCAAGAGGGAGATACAGATCATGCAGCACATGTCTGGGCAGCCCAACGTTGTGGAGATCAAGGGGGCTTATGAGGACAGGTATTCTGTGCATTTGGTGATGGAGCTCTGCGCCGGCGGGGAGCTTTTCGATAGGATTATAGCTCAGGGAGTGTATTCGGAGAGAGCTGCTGCAGCGATTGTGAGGGACATTGTGAATGTTGTGCACAGTTGTCATGTCATGGCTGTGATGCACCGTGATCTCAAGCCCGAGAATTTCTTGCTGTCTAGAAAGGGGGAAGGGGCAATGCTCAAGGGTACGGATTTCGGGTTGTCTGTTTTTATTGAGGAAGGGAAGGTATACCGAGATATAGTAGGCAGTGCTTACTATGTTGCTCCTGAAGTGTTACGGCGTAGTTATGGAAAGGAGATAGATATTTGGAGTGCTGGAGTAATTCTGTATATTCTACTTAGTGGAGTACCTCCATTTTGGGCTGAGACTGAGAGGGGCATCTTTAATGCAATATTGGAAGGTGTAGTTGACTTTGAAAGTCAACCATGGCCGTCAATATCAGACGGTGCCAAAGACCTAGTTAGAAAGATGCTGACACAGGACCCAAAAAAGAGAATTACTTCACTGAAAGTTCTAGAGCATCCCTGGCTCAGAGTAGGTGGAGAAGCATCAGACAAGCCAATAGATAGTGCAGTTCTCTCTAGAATGAAGCAATTGAGAGCAATGAATAAGCTTAAGAAGCTCGCCTTGAAGGTAATAGCGGAAAATCTATCTGAAGAAGAAATTAAAGGTCTTAAGGCAATGTTCACCAGTATGGACACCGACAAAAGTGGTACAATAACCTACGAAGAACTGAAGACAGGATTAGCTCGTATTGGGTCACGGCTATCAGAAACTGAAGTCAGGCAACTTATGGATGCTGCTGACGTTGATGGAAATGGATCGATTGACTATATTGAATTTATATCTGCTACCATGCATAGACAAAGACTAGAGAGAGATGAACACCTGTACAAAGCATTTCAGTATTTTGACAAGGATAGCAGTGGGTATATAACAAGAGATGAATTAGAGGCTGCTATGAAGGAGCATGGAATGGGTGATGAAAACACTATCAAAGATATAATTTCTGAGGTTGATGCAGATAATGACGGGAGGATCAACTACACGGAATTCTGCACAATGATGAGAAGTGGAAATCAACCCACAAGGCACTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009506 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009751 GO:0009755 GO:0009931 GO:0009987 GO:0010033 GO:0010857 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0019899 GO:0019902 GO:0019903 GO:0023052 GO:0030054 GO:0032870 GO:0033993 GO:0035556 GO:0036211 GO:0042221 GO:0042493 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0046677 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0097305 GO:0097306 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko04626 ko05145 map04626 map05145

Pfam Domains

Protein Families

EF-hand_1 EF-hand_5 EF-hand_7 Pkinase

Protein Analysis

534

Amino Acids

59.63

Weight (kDa)

6.49

Isoelectric Point (pI)

38.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	86 - 344	2.9e-74	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	87 - 337	1.7e-24	Protein tyrosine and serine/threonine kinase
EF-hand_7	PF13499	391 - 452	3.8e-12	EF-hand domain pair
EF-hand_1	PF00036	392 - 418	2.8e-06	EF hand domain
EF-hand_8	PF13833	404 - 452	2.8e-06	EF-hand domain pair
EF-hand_7	PF13499	462 - 524	2.8e-16	EF-hand domain pair
EF-hand_1	PF00036	464 - 490	1.1e-06	EF hand domain
EF-hand_6	PF13405	464 - 492	3.2e-07	EF-hand domain
EF-hand_8	PF13833	475 - 524	1.2e-08	EF-hand domain pair
EF-hand_1	PF00036	499 - 525	1.3e-07	EF hand domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0002696)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G61950 AT4G04710 AT4G04710 AT4G04710 AT4G04710 AT4G04720 AT4G04720 AT4G04740 AT4G04740 AT4G04740 AT4G04740 AT4G04740 AT4G04740 AT4G04740 AT4G21940 AT4G21940 AT4G21940
fragaria_vesca	FvH4_3g02130 FvH4_3g02130 FvH4_3g02130 FvH4_3g02130 FvH4_3g02130
malus_domestica	MD05G1345600.v1.1 MD10G1321000.v1.1
prunus_persica	Prupe.4G021300_v2.0.a1
pyrus_communis	pycom11g19140
rosa_chinensis	RchiOBHm_Chr5g0003201
rosa_laevigata	RLG00000031086
rosa_multiflora	Rmu_co8095158.1_g000001 Rmu_co8435131.1_g000001 Rmu_sc0000146.1_g000036
rosa_roxburghii	Rroxscaffold_1G00072810
rosa_rugosa	Rorug04G0401400
rosa_samantha	Rh5AG026300 Rh5BG027500 Rh5CG029100 Rh5DG025900
rosa_wichuraiana	Rw0G023540 Rw5G002430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	947
AccI	GTMKAC	2 cut(s)	320, 729
AciI	CCGC	3 cut(s)	209, 507, 1142
AclI	AACGTT	1 cut(s)	438
AclWI	GGATC	3 cut(s)	302, 1330, 1547
AcoI	YGGCCR	1 cut(s)	929
AcsI	RAATTY	3 cut(s)	643, 1340, 1553
AcuI	CTGAAG	4 cut(s)	789, 1176, 1256, 1299
AfaI	GTAC	6 cut(s)	254, 302, 688, 849, 1216, 1394
AfiI	CCNNNNNNNGG	2 cut(s)	35, 36
AflII	CTTAAG	2 cut(s)	1115, 1175
AflIII	ACRYGT	1 cut(s)	420
AgsI	TTSAA	4 cut(s)	355, 917, 1132, 1340
AjnI	CCWGG	1 cut(s)	1025
AluBI	AGCT	8 cut(s)	364, 496, 514, 533, 557, 1114, 1123, 1250
AluI	AGCT	8 cut(s)	364, 496, 514, 533, 557, 1114, 1123, 1250
Alw21I	GWGCWC	3 cut(s)	311, 498, 597
Alw26I	GTCTC	3 cut(s)	49, 103, 860
Alw44I	GTGCAC	2 cut(s)	307, 593
AlwI	GGATC	3 cut(s)	302, 1330, 1547
AlwNI	CAGNNNCTG	1 cut(s)	1277
Ama87I	CYCGRG	1 cut(s)	638
AoxI	GGCC	2 cut(s)	283, 929
ApaLI	GTGCAC	2 cut(s)	307, 593
ApeKI	GCWGC	8 cut(s)	15, 415, 430, 557, 560, 563, 1301, 1457
ApoI	RAATTY	3 cut(s)	643, 1340, 1553
ArsI	GACNNNNNNTTYG	2 cut(s)	218, 250
Asp700I	GAANNNNTTC	1 cut(s)	1000
AspLEI	GCGC	2 cut(s)	360, 503
AspS9I	GGNCC	1 cut(s)	982
AsuHPI	GGTGA	6 cut(s)	59, 338, 379, 499, 1180, 1493
AvaI	CYCGRG	1 cut(s)	638
AvaII	GGWCC	1 cut(s)	982
BaeGI	GKGCMC	2 cut(s)	311, 597
BanI	GGYRCC	1 cut(s)	947
BanII	GRGCYC	1 cut(s)	498
BbsI	GAAGAC	1 cut(s)	1244
Bbv12I	GWGCWC	3 cut(s)	311, 498, 597
BbvI	GCAGC	8 cut(s)	27, 427, 442, 544, 547, 575, 1288, 1444
BccI	CCATC	3 cut(s)	68, 484, 1307
BceAI	ACGGC	3 cut(s)	794, 916, 1280
BciT130I	CCWGG	1 cut(s)	1027
BcoDI	GTCTC	3 cut(s)	49, 103, 860
BfaI	CTAG	5 cut(s)	657, 959, 1016, 1083, 1373
BfmI	CTRYAG	1 cut(s)	561
BfrI	CTTAAG	2 cut(s)	1115, 1175
BisI	GCNGC	9 cut(s)	16, 209, 416, 431, 558, 561, 564, 1302, 1458
BlsI	GCNGC	9 cut(s)	17, 210, 417, 432, 559, 562, 565, 1303, 1459
BmcAI	AGTACT	1 cut(s)	254
Bme1390I	CCNGG	1 cut(s)	1027
Bme18I	GGWCC	1 cut(s)	982
BmeT110I	CYCGRG	1 cut(s)	638
BmgT120I	GGNCC	1 cut(s)	982
BmiI	GGNNCC	2 cut(s)	949, 984
BmrFI	CCNGG	1 cut(s)	1027
BmrI	ACTGGG	1 cut(s)	284
BmsI	GCATC	7 cut(s)	609, 888, 960, 1030, 1058, 1288, 1510
BmuI	ACTGGG	1 cut(s)	284
BpiI	GAAGAC	1 cut(s)	1244
BpmI	CTGGAG	1 cut(s)	837
Bpu10I	CCTNAGC	1 cut(s)	534
BpuEI	CTTGAG	2 cut(s)	617, 665
Bsa29I	ATCGAT	1 cut(s)	1325
BsaAI	YACGTR	1 cut(s)	300
BsaBI	GATNNNNATC	1 cut(s)	407
BsaJI	CCNNGG	2 cut(s)	926, 1025
Bsc4I	CCNNNNNNNGG	2 cut(s)	35, 36
Bse118I	RCCGGY	1 cut(s)	503
Bse1I	ACTGG	3 cut(s)	191, 279, 1191
Bse3DI	GCAATG	3 cut(s)	681, 1110, 1188
Bse8I	GATNNNNATC	1 cut(s)	407
BseBI	CCWGG	1 cut(s)	1027
BseCI	ATCGAT	1 cut(s)	1325
BseDI	CCNNGG	2 cut(s)	926, 1025
BseGI	GGATG	4 cut(s)	50, 391, 1021, 1303
BseJI	GATNNNNATC	1 cut(s)	407
BseLI	CCNNNNNNNGG	2 cut(s)	35, 36
BseMI	GCAATG	3 cut(s)	681, 1110, 1188
BseMII	CTCAG	5 cut(s)	548, 855, 861, 1045, 1503
BseNI	ACTGG	3 cut(s)	191, 279, 1191
BseRI	GAGGAG	1 cut(s)	37
BseSI	GKGCMC	2 cut(s)	311, 597
BseXI	GCAGC	8 cut(s)	27, 427, 442, 544, 547, 575, 1288, 1444
BseYI	CCCAGC	1 cut(s)	105
BsgI	GTGCAG	2 cut(s)	1092, 1543
BshFI	GGCC	2 cut(s)	285, 931
BshNI	GGYRCC	1 cut(s)	947
BshVI	ATCGAT	1 cut(s)	1325
BsiHKAI	GWGCWC	3 cut(s)	311, 498, 597
BsiHKCI	CYCGRG	1 cut(s)	638
BsiSI	CCGG	1 cut(s)	504
BslFI	GGGAC	1 cut(s)	590
BslI	CCNNNNNNNGG	2 cut(s)	35, 36
BsmAI	GTCTC	3 cut(s)	49, 103, 860
BsmFI	GGGAC	1 cut(s)	590
BsmI	GAATGC	1 cut(s)	219
BsnI	GGCC	2 cut(s)	285, 931
BsoBI	CYCGRG	1 cut(s)	638
Bsp1286I	GDGCHC	3 cut(s)	311, 498, 597
Bsp1407I	TGTACA	1 cut(s)	1392
Bsp143I	GATC	7 cut(s)	294, 348, 408, 447, 628, 1322, 1539
Bsp19I	CCATGG	1 cut(s)	926
BspACI	CCGC	3 cut(s)	209, 507, 1142
BspANI	GGCC	2 cut(s)	285, 931
BspCNI	CTCAG	5 cut(s)	547, 856, 862, 1044, 1504
BspDI	ATCGAT	1 cut(s)	1325
BspLI	GGNNCC	2 cut(s)	949, 984
BspMAI	CTGCAG	1 cut(s)	565
BspPI	GGATC	3 cut(s)	302, 1330, 1547
BspT107I	GGYRCC	1 cut(s)	947
BspTI	CTTAAG	2 cut(s)	1115, 1175
BsrDI	GCAATG	3 cut(s)	681, 1110, 1188
BsrFI	RCCGGY	1 cut(s)	503
BsrGI	TGTACA	1 cut(s)	1392
BsrI	ACTGG	3 cut(s)	191, 279, 1191
BssAI	RCCGGY	1 cut(s)	503
BssECI	CCNNGG	2 cut(s)	926, 1025
BssMI	GATC	7 cut(s)	294, 348, 408, 447, 628, 1322, 1539
BssNAI	GTATAC	1 cut(s)	730
BssT1I	CCWWGG	1 cut(s)	926
Bst1107I	GTATAC	1 cut(s)	730
Bst2UI	CCWGG	1 cut(s)	1027
Bst4CI	ACNGT	3 cut(s)	599, 626, 947
BstAFI	CTTAAG	2 cut(s)	1115, 1175
BstAUI	TGTACA	1 cut(s)	1392
BstBAI	YACGTR	1 cut(s)	300
BstC8I	GCNNGC	5 cut(s)	201, 340, 362, 505, 1125
BstDEI	CTNAG	6 cut(s)	534, 839, 864, 870, 1031, 1512
BstDSI	CCRYGG	1 cut(s)	926
BstF5I	GGATG	4 cut(s)	50, 391, 1021, 1303
BstHHI	GCGC	2 cut(s)	360, 503
BstKTI	GATC	7 cut(s)	297, 351, 411, 450, 631, 1325, 1542
BstMAI	GTCTC	3 cut(s)	49, 103, 860
BstMBI	GATC	7 cut(s)	294, 348, 408, 447, 628, 1322, 1539
BstMWI	GCNNNNNNNGC	6 cut(s)	15, 196, 205, 563, 1027, 1120
BstNI	CCWGG	1 cut(s)	1027
BstNSI	RCATGY	1 cut(s)	424
BstSCI	CCNGG	1 cut(s)	1025
BstSFI	CTRYAG	1 cut(s)	561
BstSLI	GKGCMC	2 cut(s)	311, 597
BstV1I	GCAGC	8 cut(s)	27, 427, 442, 544, 547, 575, 1288, 1444
BstV2I	GAAGAC	1 cut(s)	1244
BstXI	CCANNNNNNTGG	1 cut(s)	442
BstZ17I	GTATAC	1 cut(s)	730
Bsu15I	ATCGAT	1 cut(s)	1325
BsuRI	GGCC	2 cut(s)	285, 931
BsuTUI	ATCGAT	1 cut(s)	1325
BtgI	CCRYGG	1 cut(s)	926
BtsCI	GGATG	4 cut(s)	50, 391, 1021, 1303
BtsI	GCAGTG	3 cut(s)	210, 754, 1432
BtsIMutI	CAGTG	5 cut(s)	198, 210, 754, 1004, 1432
Cac8I	GCNNGC	5 cut(s)	201, 340, 362, 505, 1125
CaiI	CAGNNNCTG	1 cut(s)	1277
CfoI	GCGC	2 cut(s)	360, 503
Cfr10I	RCCGGY	1 cut(s)	503
Cfr13I	GGNCC	1 cut(s)	982
ClaI	ATCGAT	1 cut(s)	1325
Csp6I	GTAC	6 cut(s)	253, 301, 687, 848, 1215, 1393
CviAII	CATG	7 cut(s)	412, 421, 605, 610, 927, 1357, 1472
CviQI	GTAC	6 cut(s)	253, 301, 687, 848, 1215, 1393
DdeI	CTNAG	6 cut(s)	534, 839, 864, 870, 1031, 1512
DpnI	GATC	7 cut(s)	296, 350, 410, 449, 630, 1324, 1541
DpnII	GATC	7 cut(s)	294, 348, 408, 447, 628, 1322, 1539
EaeI	YGGCCR	1 cut(s)	929
Ecl136II	GAGCTC	1 cut(s)	496
Eco130I	CCWWGG	1 cut(s)	926
Eco24I	GRGCYC	1 cut(s)	498
Eco32I	GATATC	1 cut(s)	391
Eco47I	GGWCC	1 cut(s)	982
Eco53kI	GAGCTC	1 cut(s)	496
Eco57I	CTGAAG	4 cut(s)	789, 1176, 1256, 1299
Eco88I	CYCGRG	1 cut(s)	638
EcoICRI	GAGCTC	1 cut(s)	496
EcoO109I	RGGNCCY	1 cut(s)	982
EcoRI	GAATTC	1 cut(s)	1553
EcoRII	CCWGG	1 cut(s)	1025
EcoRV	GATATC	1 cut(s)	391
EcoT14I	CCWWGG	1 cut(s)	926
EcoT22I	ATGCAT	1 cut(s)	1362
EcoT38I	GRGCYC	1 cut(s)	498
ErhI	CCWWGG	1 cut(s)	926
FaeI	CATG	7 cut(s)	415, 424, 608, 613, 930, 1360, 1475
FalI	AAGNNNNNCTT	5 cut(s)	335, 367, 1112, 1144, 1582
FaqI	GGGAC	1 cut(s)	590
FatI	CATG	7 cut(s)	411, 420, 604, 609, 926, 1356, 1471
FauI	CCCGC	1 cut(s)	500
FauNDI	CATATG	1 cut(s)	334
FblI	GTMKAC	2 cut(s)	320, 729
Fnu4HI	GCNGC	9 cut(s)	16, 209, 416, 431, 558, 561, 564, 1302, 1458
FokI	GGATG	4 cut(s)	37, 398, 1008, 1310
FriOI	GRGCYC	1 cut(s)	498
Fsp4HI	GCNGC	9 cut(s)	16, 209, 416, 431, 558, 561, 564, 1302, 1458
FspBI	CTAG	5 cut(s)	657, 959, 1016, 1083, 1373
GlaI	GCGC	2 cut(s)	359, 502
GluI	GCNGC	9 cut(s)	16, 209, 416, 431, 558, 561, 564, 1302, 1458
GsaI	CCCAGC	1 cut(s)	109
GsuI	CTGGAG	1 cut(s)	837
HaeIII	GGCC	2 cut(s)	285, 931
HapII	CCGG	1 cut(s)	504
HhaI	GCGC	2 cut(s)	360, 503
Hin1II	CATG	7 cut(s)	415, 424, 608, 613, 930, 1360, 1475
Hin6I	GCGC	2 cut(s)	358, 501
HinP1I	GCGC	2 cut(s)	358, 501
HincII	GTYRAC	2 cut(s)	910, 923
HindII	GTYRAC	2 cut(s)	910, 923
HindIII	AAGCTT	1 cut(s)	1112
HpaII	CCGG	1 cut(s)	504
HphI	GGTGA	6 cut(s)	59, 338, 379, 499, 1180, 1493
Hpy166II	GTNNAC	7 cut(s)	309, 321, 595, 730, 910, 923, 1188
Hpy188I	TCNGA	7 cut(s)	550, 943, 1034, 1054, 1156, 1273, 1513
Hpy188III	TCNNGA	8 cut(s)	224, 352, 394, 657, 767, 1016, 1083, 1599
Hpy8I	GTNNAC	7 cut(s)	309, 321, 595, 730, 910, 923, 1188
HpyAV	CCTTC	6 cut(s)	662, 713, 718, 893, 1126, 1459
HpyCH4III	ACNGT	3 cut(s)	599, 626, 947
HpyCH4IV	ACGT	3 cut(s)	299, 438, 1308
HpyF10VI	GCNNNNNNNGC	6 cut(s)	15, 196, 205, 563, 1027, 1120
HpyF3I	CTNAG	6 cut(s)	534, 839, 864, 870, 1031, 1512
HpySE526I	ACGT	3 cut(s)	299, 438, 1308
Hsp92II	CATG	7 cut(s)	415, 424, 608, 613, 930, 1360, 1475
HspAI	GCGC	2 cut(s)	358, 501
KroI	GCCGGC	1 cut(s)	503
KroNI	GCCGGC	1 cut(s)	505
Kzo9I	GATC	7 cut(s)	294, 348, 408, 447, 628, 1322, 1539
LmnI	GCTCC	4 cut(s)	493, 511, 769, 1468
Lsp1109I	GCAGC	8 cut(s)	27, 427, 442, 544, 547, 575, 1288, 1444
LweI	GCATC	7 cut(s)	609, 888, 960, 1030, 1058, 1288, 1510
MaeI	CTAG	5 cut(s)	657, 959, 1016, 1083, 1373
MaeII	ACGT	3 cut(s)	299, 438, 1308
MaeIII	GTNAC	2 cut(s)	774, 1260
MalI	GATC	7 cut(s)	296, 350, 410, 449, 630, 1324, 1541
MboI	GATC	7 cut(s)	294, 348, 408, 447, 628, 1322, 1539
MboII	GAAGA	4 cut(s)	1169, 1172, 1241, 1249
MfeI	CAATTG	1 cut(s)	1094
MhlI	GDGCHC	3 cut(s)	311, 498, 597
MmeI	TCCRAC	1 cut(s)	158
Mph1103I	ATGCAT	1 cut(s)	1362
MreI	CGCCGGCG	1 cut(s)	503
MroNI	GCCGGC	1 cut(s)	503
MroXI	GAANNNNTTC	1 cut(s)	1000
MseI	TTAA	5 cut(s)	246, 885, 1116, 1167, 1176
MslI	CAYNNNNRTG	3 cut(s)	614, 1193, 1565
MspCI	CTTAAG	2 cut(s)	1115, 1175
MspI	CCGG	1 cut(s)	504
MspR9I	CCNGG	1 cut(s)	1027
MunI	CAATTG	1 cut(s)	1094
Mva1269I	GAATGC	1 cut(s)	219
MvaI	CCWGG	1 cut(s)	1027
MwoI	GCNNNNNNNGC	6 cut(s)	15, 196, 205, 563, 1027, 1120
NaeI	GCCGGC	1 cut(s)	505
NcoI	CCATGG	1 cut(s)	926
NdeI	CATATG	1 cut(s)	334
NdeII	GATC	7 cut(s)	294, 348, 408, 447, 628, 1322, 1539
NgoMIV	GCCGGC	1 cut(s)	503
NlaIII	CATG	7 cut(s)	415, 424, 608, 613, 930, 1360, 1475
NlaIV	GGNNCC	2 cut(s)	949, 984
NmuCI	GTSAC	1 cut(s)	1260
NsiI	ATGCAT	1 cut(s)	1362
NspI	RCATGY	1 cut(s)	424
PciI	ACATGT	1 cut(s)	420
PctI	GAATGC	1 cut(s)	219
PdiI	GCCGGC	1 cut(s)	505
PdmI	GAANNNNTTC	1 cut(s)	1000
PkrI	GCNGC	9 cut(s)	17, 210, 417, 432, 559, 562, 565, 1303, 1459
Ppu21I	YACGTR	1 cut(s)	300
PpuMI	RGGWCCY	1 cut(s)	982
PscI	ACATGT	1 cut(s)	420
Psp124BI	GAGCTC	1 cut(s)	498
Psp1406I	AACGTT	1 cut(s)	438
Psp5II	RGGWCCY	1 cut(s)	982
Psp6I	CCWGG	1 cut(s)	1025
PspFI	CCCAGC	1 cut(s)	105
PspGI	CCWGG	1 cut(s)	1025
PspN4I	GGNNCC	2 cut(s)	949, 984
PspPI	GGNCC	1 cut(s)	982
PspPPI	RGGWCCY	1 cut(s)	982
PstI	CTGCAG	1 cut(s)	565
PstNI	CAGNNNCTG	1 cut(s)	1277
RsaI	GTAC	6 cut(s)	254, 302, 688, 849, 1216, 1394
RsaNI	GTAC	6 cut(s)	253, 301, 687, 848, 1215, 1393
RseI	CAYNNNNRTG	3 cut(s)	614, 1193, 1565
SacI	GAGCTC	1 cut(s)	498
SaqAI	TTAA	5 cut(s)	246, 885, 1116, 1167, 1176
SatI	GCNGC	9 cut(s)	16, 209, 416, 431, 558, 561, 564, 1302, 1458
Sau3AI	GATC	7 cut(s)	294, 348, 408, 447, 628, 1322, 1539
Sau96I	GGNCC	1 cut(s)	982
ScaI	AGTACT	1 cut(s)	254
ScrFI	CCNGG	1 cut(s)	1027
SduI	GDGCHC	3 cut(s)	311, 498, 597
SfaNI	GCATC	7 cut(s)	609, 888, 960, 1030, 1058, 1288, 1510
SfcI	CTRYAG	1 cut(s)	561
SgrAI	CRCCGGYG	1 cut(s)	503
SinI	GGWCC	1 cut(s)	982
SmiMI	CAYNNNNRTG	3 cut(s)	614, 1193, 1565
SmlI	CTYRAG	4 cut(s)	632, 680, 1115, 1175
SmoI	CTYRAG	4 cut(s)	632, 680, 1115, 1175
SsiI	CCGC	3 cut(s)	209, 507, 1142
SspI	AATATT	1 cut(s)	894
SspMI	CTAG	5 cut(s)	657, 959, 1016, 1083, 1373
SstI	GAGCTC	1 cut(s)	498
StyD4I	CCNGG	1 cut(s)	1025
StyI	CCWWGG	1 cut(s)	926
TaaI	ACNGT	3 cut(s)	599, 626, 947
TaiI	ACGT	3 cut(s)	302, 441, 1311
TaqI	TCGA	3 cut(s)	347, 519, 1325
TatI	WGTACW	2 cut(s)	252, 1392
TauI	GCSGC	1 cut(s)	211
Tru1I	TTAA	5 cut(s)	246, 885, 1116, 1167, 1176
Tru9I	TTAA	5 cut(s)	246, 885, 1116, 1167, 1176
TscAI	CASTG	5 cut(s)	198, 210, 754, 1011, 1432
TseFI	GTSAC	1 cut(s)	1260
TseI	GCWGC	8 cut(s)	15, 415, 430, 557, 560, 563, 1301, 1457
Tsp45I	GTSAC	1 cut(s)	1260
TspDTI	ATGAA	6 cut(s)	1103, 1121, 1398, 1461, 1478, 1500
TspGWI	ACGGA	2 cut(s)	704, 1565
TspRI	CASTG	5 cut(s)	198, 210, 754, 1011, 1432
Vha464I	CTTAAG	2 cut(s)	1115, 1175
VneI	GTGCAC	2 cut(s)	307, 593
VpaK11BI	GGWCC	1 cut(s)	982
XapI	RAATTY	3 cut(s)	643, 1340, 1553
XbaI	TCTAGA	3 cut(s)	656, 1015, 1082
XceI	RCATGY	1 cut(s)	424
XmiI	GTMKAC	2 cut(s)	320, 729
XmnI	GAANNNNTTC	1 cut(s)	1000
XspI	CTAG	5 cut(s)	657, 959, 1016, 1083, 1373
ZrmI	AGTACT	1 cut(s)	254
Zsp2I	ATGCAT	1 cut(s)	1362

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.