Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0002696

Physical Location & Seq

Genomic Coordinates Reverse (-)

2127817 .. 2131758

Gene Structure 3942 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G002430.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1608 bp

ATGGGTTGCTGTGGCAGCAAGACCAAACCCAATAATGGGTATGTCTCCTCTTCCATACCCATCTCTCACCACCACCCACAACAGCAATCCTTGTCTGTCTCAACCCAGCAACCTCACAAAGTTTCAGCTCCCCCAACCCATAACCCACCTCCACCACCCCAACCCCAATACCAACCACCAAAGCCACACCCACAGCCAGTGAAGCCAGCAGTGCCGCCAAACAGCATTCTTGAGAAGCCCTTTGATGACATTAAGCAGTACTACACTCTGGGCAAAGAACTGGGCAGAGGCCAATTTGGGATCACGTACTTGTGCACGGAGAAGTCTACGGGTGATACATATGCCTGCAAGTCGATCTTGAAGCGCAAGCTGGTGAGTAAAAGTGATAGGGATGATATCAAGAGGGAGATACAGATCATGCAGCACATGTCTGGGCAGCCCAACGTTGTGGAGATCAAAGGGGCGTATGAGGACAGGTACTCTGTGCATTTGGTGATGGAGCTCTGCGCCGGCGGGGAGCTTTTCGATAGGATCATAGCGCAGGGAGTGTATTCGGAGAGAGCTGCCGCCGCGATTGTGAGGGACATTGTGAATGTTGTGCACAGTTGTCATGTTATGGCTGTGATGCACCGTGATCTCAAGCCCGAGAATTTCTTGCTGTCTAGTAAGGGGGAAGGGGCAGTGCTCAAGGGTACGGATTTCGGGTTGTCTGTTTTTATTGAGGAAGGGAAGGTATACCGAGATATAGTAGGCAGTGCTTACTATGTTGCTCCTGAAGTGTTACGGCGTAGTTATGGAAAGGAGATAGATATTTGGAGTGCTGGAGTAATTCTGTATATTCTACTTAGTGGAGTACCTCCATTTTGGGCTGAGACTGAGAGGGGCATCTTTAATGCAATATTGGAAGGTGTAGTTGACTTTGAAAGTCAACCATGGCCGTCAATATCAGACGGTGCCAAAGACCTAGTTAGAAAGATGCTGACACAGGACCCAAAAAAGAGAATTACTTCACTGAAAGTTCTTGAGCATCCCTGGCTCAGAGTAGGTGGAGAAGCATCAGACAAGCCAATAGATAGTGCAGTTCTCTCTAGAATGAAGCAGTTGAGAGCAATGAATAAGCTTAAGAAGCTTGCCTTGAAGGTAATAGCGGAAAATCTATCTGAAGAAGAAATTAAAGGTCTTAAGGCAATGTTCACCAGTATGGACACCGACAAAAGTGGTACAATAACCTACGAAGAACTGAAGACAGGATTAGCTCGTATTGGGTCACGGCTATCAGAAACCGAAGTCAGGCAACTAATGGATGCTGCTGACGTTGATGGAAATGGATCGATTGACTATATTGAATTTATATCTGCTACTATGCATAGACAAAGACTAGAGAGAGATGAACACCTGTACAAAGCATTTCAGTATTTTGACAAGGATAGCAGTGGGTATATAACAAGAGATGAATTAGAGGCTGCTATGAAGGAGCATGGAATGGGTGATGAAAACACTATCAAAGAAATAATTTCCGAGGTTGATGCAGATAATGACGGGAGGATCAACTACACGGAATTCTGCACAATGATGAGAAGTGGAAATCAACCCACAAGGCACTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009506 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009751 GO:0009755 GO:0009931 GO:0009987 GO:0010033 GO:0010857 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0019899 GO:0019902 GO:0019903 GO:0023052 GO:0030054 GO:0032870 GO:0033993 GO:0035556 GO:0036211 GO:0042221 GO:0042493 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0046677 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0097305 GO:0097306 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko04626 ko05145 map04626 map05145

Pfam Domains

Protein Families

EF-hand_1 EF-hand_5 EF-hand_7 Pkinase

Protein Analysis

535

Amino Acids

59.85

Weight (kDa)

6.37

Isoelectric Point (pI)

38.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	88 - 346	2.5e-74	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	89 - 339	1.3e-24	Protein tyrosine and serine/threonine kinase
EF-hand_7	PF13499	393 - 454	3.8e-12	EF-hand domain pair
EF-hand_1	PF00036	394 - 420	2.8e-06	EF hand domain
EF-hand_8	PF13833	406 - 454	2.8e-06	EF-hand domain pair
EF-hand_7	PF13499	464 - 526	1.7e-16	EF-hand domain pair
EF-hand_1	PF00036	466 - 492	1.1e-06	EF hand domain
EF-hand_6	PF13405	466 - 494	3.3e-07	EF-hand domain
EF-hand_8	PF13833	477 - 526	1.7e-08	EF-hand domain pair
EF-hand_1	PF00036	501 - 527	5.7e-08	EF hand domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002696)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G61950 AT4G04710 AT4G04710 AT4G04710 AT4G04710 AT4G04720 AT4G04720 AT4G04740 AT4G04740 AT4G04740 AT4G04740 AT4G04740 AT4G04740 AT4G04740 AT4G21940 AT4G21940 AT4G21940
fragaria_vesca	FvH4_3g02130 FvH4_3g02130 FvH4_3g02130 FvH4_3g02130 FvH4_3g02130
malus_domestica	MD05G1345600.v1.1 MD10G1321000.v1.1
prunus_persica	Prupe.4G021300_v2.0.a1
pyrus_communis	pycom11g19140
rosa_chinensis	RchiOBHm_Chr5g0003201
rosa_laevigata	RLG00000031086
rosa_multiflora	Rmu_co8095158.1_g000001 Rmu_co8435131.1_g000001 Rmu_sc0000146.1_g000036
rosa_roxburghii	Rroxscaffold_1G00072810
rosa_rugosa	Rorug04G0401400
rosa_samantha	Rh5AG026300 Rh5BG027500 Rh5CG029100 Rh5DG025900
rosa_wichuraiana	Rw0G023540 Rw5G002430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	953
AccI	GTMKAC	2 cut(s)	326, 735
AccII	CGCG	1 cut(s)	572
AciI	CCGC	5 cut(s)	215, 513, 567, 570, 1148
AclI	AACGTT	1 cut(s)	444
AclWI	GGATC	4 cut(s)	308, 539, 1336, 1553
AcoI	YGGCCR	1 cut(s)	935
AcsI	RAATTY	3 cut(s)	649, 1346, 1559
AcuI	CTGAAG	3 cut(s)	795, 1182, 1262
AfaI	GTAC	7 cut(s)	260, 308, 479, 694, 855, 1222, 1400
AfiI	CCNNNNNNNGG	3 cut(s)	35, 36, 1290
AflII	CTTAAG	2 cut(s)	1121, 1181
AflIII	ACRYGT	1 cut(s)	426
AgsI	TTSAA	4 cut(s)	361, 923, 1138, 1346
AjnI	CCWGG	1 cut(s)	1031
AluBI	AGCT	8 cut(s)	128, 370, 502, 520, 563, 1120, 1129, 1256
AluI	AGCT	8 cut(s)	128, 370, 502, 520, 563, 1120, 1129, 1256
Alw21I	GWGCWC	4 cut(s)	317, 504, 603, 687
Alw26I	GTCTC	3 cut(s)	49, 103, 866
Alw44I	GTGCAC	2 cut(s)	313, 599
AlwI	GGATC	4 cut(s)	308, 539, 1336, 1553
Ama87I	CYCGRG	1 cut(s)	644
AoxI	GGCC	2 cut(s)	289, 935
ApaLI	GTGCAC	2 cut(s)	313, 599
ApeKI	GCWGC	6 cut(s)	15, 421, 436, 563, 1307, 1463
ApoI	RAATTY	3 cut(s)	649, 1346, 1559
Asp700I	GAANNNNTTC	1 cut(s)	1006
AspLEI	GCGC	3 cut(s)	366, 509, 541
AspS9I	GGNCC	1 cut(s)	988
AsuHPI	GGTGA	6 cut(s)	59, 344, 385, 505, 1186, 1499
AvaI	CYCGRG	1 cut(s)	644
AvaII	GGWCC	1 cut(s)	988
BaeGI	GKGCMC	2 cut(s)	317, 603
BanI	GGYRCC	1 cut(s)	953
BanII	GRGCYC	1 cut(s)	504
BbsI	GAAGAC	1 cut(s)	1250
Bbv12I	GWGCWC	4 cut(s)	317, 504, 603, 687
BbvI	GCAGC	6 cut(s)	27, 433, 448, 550, 1294, 1450
BccI	CCATC	3 cut(s)	68, 490, 1313
BceAI	ACGGC	3 cut(s)	800, 922, 1286
BcgI	CGANNNNNNTGC	2 cut(s)	1508, 1542
BciT130I	CCWGG	1 cut(s)	1033
BcoDI	GTCTC	3 cut(s)	49, 103, 866
BfaI	CTAG	4 cut(s)	663, 965, 1089, 1379
BfrI	CTTAAG	2 cut(s)	1121, 1181
BisI	GCNGC	9 cut(s)	16, 215, 422, 437, 564, 567, 570, 1308, 1464
BlsI	GCNGC	9 cut(s)	17, 216, 423, 438, 565, 568, 571, 1309, 1465
BmcAI	AGTACT	1 cut(s)	260
Bme1390I	CCNGG	1 cut(s)	1033
Bme18I	GGWCC	1 cut(s)	988
BmeT110I	CYCGRG	1 cut(s)	644
BmgT120I	GGNCC	1 cut(s)	988
BmiI	GGNNCC	2 cut(s)	955, 990
BmrFI	CCNGG	1 cut(s)	1033
BmrI	ACTGGG	1 cut(s)	290
BmsI	GCATC	7 cut(s)	615, 894, 966, 1036, 1064, 1294, 1516
BmuI	ACTGGG	1 cut(s)	290
BpiI	GAAGAC	1 cut(s)	1250
BpmI	CTGGAG	1 cut(s)	843
BpuEI	CTTGAG	4 cut(s)	251, 623, 671, 1043
Bsa29I	ATCGAT	1 cut(s)	1331
BsaAI	YACGTR	1 cut(s)	306
BsaBI	GATNNNNATC	1 cut(s)	413
BsaJI	CCNNGG	3 cut(s)	932, 1031, 1518
Bsc4I	CCNNNNNNNGG	3 cut(s)	35, 36, 1290
Bse118I	RCCGGY	1 cut(s)	509
Bse1I	ACTGG	3 cut(s)	197, 285, 1197
Bse3DI	GCAATG	2 cut(s)	1116, 1194
Bse8I	GATNNNNATC	1 cut(s)	413
BseBI	CCWGG	1 cut(s)	1033
BseCI	ATCGAT	1 cut(s)	1331
BseDI	CCNNGG	3 cut(s)	932, 1031, 1518
BseGI	GGATG	3 cut(s)	397, 1027, 1309
BseJI	GATNNNNATC	1 cut(s)	413
BseLI	CCNNNNNNNGG	3 cut(s)	35, 36, 1290
BseMI	GCAATG	2 cut(s)	1116, 1194
BseMII	CTCAG	3 cut(s)	861, 867, 1051
BseNI	ACTGG	3 cut(s)	197, 285, 1197
BseRI	GAGGAG	1 cut(s)	37
BseSI	GKGCMC	2 cut(s)	317, 603
BseXI	GCAGC	6 cut(s)	27, 433, 448, 550, 1294, 1450
BseYI	CCCAGC	1 cut(s)	105
BsgI	GTGCAG	2 cut(s)	1098, 1549
Bsh1236I	CGCG	1 cut(s)	572
BshFI	GGCC	2 cut(s)	291, 937
BshNI	GGYRCC	1 cut(s)	953
BshVI	ATCGAT	1 cut(s)	1331
BsiHKAI	GWGCWC	4 cut(s)	317, 504, 603, 687
BsiHKCI	CYCGRG	1 cut(s)	644
BsiSI	CCGG	1 cut(s)	510
BslFI	GGGAC	1 cut(s)	596
BslI	CCNNNNNNNGG	3 cut(s)	35, 36, 1290
BsmAI	GTCTC	3 cut(s)	49, 103, 866
BsmFI	GGGAC	1 cut(s)	596
BsmI	GAATGC	1 cut(s)	225
BsnI	GGCC	2 cut(s)	291, 937
BsoBI	CYCGRG	1 cut(s)	644
Bsp1286I	GDGCHC	4 cut(s)	317, 504, 603, 687
Bsp1407I	TGTACA	1 cut(s)	1398
Bsp143I	GATC	8 cut(s)	300, 354, 414, 453, 531, 634, 1328, 1545
Bsp19I	CCATGG	1 cut(s)	932
BspACI	CCGC	5 cut(s)	215, 513, 567, 570, 1148
BspANI	GGCC	2 cut(s)	291, 937
BspCNI	CTCAG	3 cut(s)	862, 868, 1050
BspDI	ATCGAT	1 cut(s)	1331
BspFNI	CGCG	1 cut(s)	572
BspLI	GGNNCC	2 cut(s)	955, 990
BspPI	GGATC	4 cut(s)	308, 539, 1336, 1553
BspT107I	GGYRCC	1 cut(s)	953
BspTI	CTTAAG	2 cut(s)	1121, 1181
BsrDI	GCAATG	2 cut(s)	1116, 1194
BsrFI	RCCGGY	1 cut(s)	509
BsrGI	TGTACA	1 cut(s)	1398
BsrI	ACTGG	3 cut(s)	197, 285, 1197
BssAI	RCCGGY	1 cut(s)	509
BssECI	CCNNGG	3 cut(s)	932, 1031, 1518
BssMI	GATC	8 cut(s)	300, 354, 414, 453, 531, 634, 1328, 1545
BssNAI	GTATAC	1 cut(s)	736
BssT1I	CCWWGG	1 cut(s)	932
Bst1107I	GTATAC	1 cut(s)	736
Bst2UI	CCWGG	1 cut(s)	1033
Bst4CI	ACNGT	3 cut(s)	605, 632, 953
Bst6I	CTCTTC	1 cut(s)	55
BstAFI	CTTAAG	2 cut(s)	1121, 1181
BstAUI	TGTACA	1 cut(s)	1398
BstBAI	YACGTR	1 cut(s)	306
BstC8I	GCNNGC	5 cut(s)	207, 346, 368, 511, 1131
BstDEI	CTNAG	4 cut(s)	845, 870, 876, 1037
BstDSI	CCRYGG	1 cut(s)	932
BstF5I	GGATG	3 cut(s)	397, 1027, 1309
BstFNI	CGCG	1 cut(s)	572
BstHHI	GCGC	3 cut(s)	366, 509, 541
BstKTI	GATC	8 cut(s)	303, 357, 417, 456, 534, 637, 1331, 1548
BstMAI	GTCTC	3 cut(s)	49, 103, 866
BstMBI	GATC	8 cut(s)	300, 354, 414, 453, 531, 634, 1328, 1545
BstMWI	GCNNNNNNNGC	6 cut(s)	15, 202, 211, 569, 1033, 1126
BstNI	CCWGG	1 cut(s)	1033
BstNSI	RCATGY	1 cut(s)	430
BstSCI	CCNGG	1 cut(s)	1031
BstSLI	GKGCMC	2 cut(s)	317, 603
BstUI	CGCG	1 cut(s)	572
BstV1I	GCAGC	6 cut(s)	27, 433, 448, 550, 1294, 1450
BstV2I	GAAGAC	1 cut(s)	1250
BstXI	CCANNNNNNTGG	1 cut(s)	448
BstZ17I	GTATAC	1 cut(s)	736
Bsu15I	ATCGAT	1 cut(s)	1331
BsuRI	GGCC	2 cut(s)	291, 937
BsuTUI	ATCGAT	1 cut(s)	1331
BtgI	CCRYGG	1 cut(s)	932
BtsCI	GGATG	3 cut(s)	397, 1027, 1309
BtsI	GCAGTG	4 cut(s)	216, 687, 760, 1438
BtsIMutI	CAGTG	6 cut(s)	204, 216, 687, 760, 1010, 1438
Cac8I	GCNNGC	5 cut(s)	207, 346, 368, 511, 1131
CfoI	GCGC	3 cut(s)	366, 509, 541
Cfr10I	RCCGGY	1 cut(s)	509
Cfr13I	GGNCC	1 cut(s)	988
ClaI	ATCGAT	1 cut(s)	1331
Csp6I	GTAC	7 cut(s)	259, 307, 478, 693, 854, 1221, 1399
CviAII	CATG	5 cut(s)	418, 427, 611, 933, 1478
CviQI	GTAC	7 cut(s)	259, 307, 478, 693, 854, 1221, 1399
DdeI	CTNAG	4 cut(s)	845, 870, 876, 1037
DpnI	GATC	8 cut(s)	302, 356, 416, 455, 533, 636, 1330, 1547
DpnII	GATC	8 cut(s)	300, 354, 414, 453, 531, 634, 1328, 1545
EaeI	YGGCCR	1 cut(s)	935
Eam1104I	CTCTTC	1 cut(s)	55
EarI	CTCTTC	1 cut(s)	55
Ecl136II	GAGCTC	1 cut(s)	502
Eco130I	CCWWGG	1 cut(s)	932
Eco24I	GRGCYC	1 cut(s)	504
Eco32I	GATATC	1 cut(s)	397
Eco47I	GGWCC	1 cut(s)	988
Eco53kI	GAGCTC	1 cut(s)	502
Eco57I	CTGAAG	3 cut(s)	795, 1182, 1262
Eco88I	CYCGRG	1 cut(s)	644
EcoICRI	GAGCTC	1 cut(s)	502
EcoO109I	RGGNCCY	1 cut(s)	988
EcoRI	GAATTC	1 cut(s)	1559
EcoRII	CCWGG	1 cut(s)	1031
EcoRV	GATATC	1 cut(s)	397
EcoT14I	CCWWGG	1 cut(s)	932
EcoT22I	ATGCAT	1 cut(s)	1368
EcoT38I	GRGCYC	1 cut(s)	504
ErhI	CCWWGG	1 cut(s)	932
FaeI	CATG	5 cut(s)	421, 430, 614, 936, 1481
FalI	AAGNNNNNCTT	5 cut(s)	341, 373, 1118, 1150, 1588
FaqI	GGGAC	1 cut(s)	596
FatI	CATG	5 cut(s)	417, 426, 610, 932, 1477
FauI	CCCGC	1 cut(s)	506
FauNDI	CATATG	1 cut(s)	340
FblI	GTMKAC	2 cut(s)	326, 735
Fnu4HI	GCNGC	9 cut(s)	16, 215, 422, 437, 564, 567, 570, 1308, 1464
FokI	GGATG	3 cut(s)	404, 1014, 1316
FriOI	GRGCYC	1 cut(s)	504
Fsp4HI	GCNGC	9 cut(s)	16, 215, 422, 437, 564, 567, 570, 1308, 1464
FspBI	CTAG	4 cut(s)	663, 965, 1089, 1379
GlaI	GCGC	3 cut(s)	365, 508, 540
GluI	GCNGC	9 cut(s)	16, 215, 422, 437, 564, 567, 570, 1308, 1464
GsaI	CCCAGC	1 cut(s)	109
GsuI	CTGGAG	1 cut(s)	843
HaeIII	GGCC	2 cut(s)	291, 937
HapII	CCGG	1 cut(s)	510
HhaI	GCGC	3 cut(s)	366, 509, 541
Hin1II	CATG	5 cut(s)	421, 430, 614, 936, 1481
Hin6I	GCGC	3 cut(s)	364, 507, 539
HinP1I	GCGC	3 cut(s)	364, 507, 539
HincII	GTYRAC	2 cut(s)	916, 929
HindII	GTYRAC	2 cut(s)	916, 929
HindIII	AAGCTT	2 cut(s)	1118, 1127
HpaII	CCGG	1 cut(s)	510
HphI	GGTGA	6 cut(s)	59, 344, 385, 505, 1186, 1499
Hpy166II	GTNNAC	7 cut(s)	315, 327, 601, 736, 916, 929, 1194
Hpy188I	TCNGA	7 cut(s)	556, 949, 1040, 1060, 1162, 1279, 1519
Hpy188III	TCNNGA	7 cut(s)	230, 358, 400, 773, 1022, 1089, 1605
Hpy8I	GTNNAC	7 cut(s)	315, 327, 601, 736, 916, 929, 1194
HpyAV	CCTTC	6 cut(s)	668, 719, 724, 899, 1132, 1465
HpyCH4III	ACNGT	3 cut(s)	605, 632, 953
HpyCH4IV	ACGT	3 cut(s)	305, 444, 1314
HpyF10VI	GCNNNNNNNGC	6 cut(s)	15, 202, 211, 569, 1033, 1126
HpyF3I	CTNAG	4 cut(s)	845, 870, 876, 1037
HpySE526I	ACGT	3 cut(s)	305, 444, 1314
Hsp92II	CATG	5 cut(s)	421, 430, 614, 936, 1481
HspAI	GCGC	3 cut(s)	364, 507, 539
KroI	GCCGGC	1 cut(s)	509
KroNI	GCCGGC	1 cut(s)	511
Kzo9I	GATC	8 cut(s)	300, 354, 414, 453, 531, 634, 1328, 1545
LmnI	GCTCC	5 cut(s)	133, 499, 517, 775, 1474
Lsp1109I	GCAGC	6 cut(s)	27, 433, 448, 550, 1294, 1450
LweI	GCATC	7 cut(s)	615, 894, 966, 1036, 1064, 1294, 1516
MaeI	CTAG	4 cut(s)	663, 965, 1089, 1379
MaeII	ACGT	3 cut(s)	305, 444, 1314
MaeIII	GTNAC	2 cut(s)	780, 1266
MalI	GATC	8 cut(s)	302, 356, 416, 455, 533, 636, 1330, 1547
MboI	GATC	8 cut(s)	300, 354, 414, 453, 531, 634, 1328, 1545
MboII	GAAGA	5 cut(s)	42, 1175, 1178, 1247, 1255
MhlI	GDGCHC	4 cut(s)	317, 504, 603, 687
MluCI	AATT	9 cut(s)	293, 649, 828, 1002, 1170, 1346, 1454, 1512, 1559
Mph1103I	ATGCAT	1 cut(s)	1368
MreI	CGCCGGCG	1 cut(s)	509
MroNI	GCCGGC	1 cut(s)	509
MroXI	GAANNNNTTC	1 cut(s)	1006
MseI	TTAA	5 cut(s)	252, 891, 1122, 1173, 1182
MslI	CAYNNNNRTG	2 cut(s)	1199, 1571
MspCI	CTTAAG	2 cut(s)	1121, 1181
MspI	CCGG	1 cut(s)	510
MspR9I	CCNGG	1 cut(s)	1033
Mva1269I	GAATGC	1 cut(s)	225
MvaI	CCWGG	1 cut(s)	1033
MvnI	CGCG	1 cut(s)	572
MwoI	GCNNNNNNNGC	6 cut(s)	15, 202, 211, 569, 1033, 1126
NaeI	GCCGGC	1 cut(s)	511
NcoI	CCATGG	1 cut(s)	932
NdeI	CATATG	1 cut(s)	340
NdeII	GATC	8 cut(s)	300, 354, 414, 453, 531, 634, 1328, 1545
NgoMIV	GCCGGC	1 cut(s)	509
NlaIII	CATG	5 cut(s)	421, 430, 614, 936, 1481
NlaIV	GGNNCC	2 cut(s)	955, 990
NmuCI	GTSAC	1 cut(s)	1266
NsiI	ATGCAT	1 cut(s)	1368
NspI	RCATGY	1 cut(s)	430
PciI	ACATGT	1 cut(s)	426
PctI	GAATGC	1 cut(s)	225
PdiI	GCCGGC	1 cut(s)	511
PdmI	GAANNNNTTC	1 cut(s)	1006
PkrI	GCNGC	9 cut(s)	17, 216, 423, 438, 565, 568, 571, 1309, 1465
Ppu21I	YACGTR	1 cut(s)	306
PpuMI	RGGWCCY	1 cut(s)	988
PscI	ACATGT	1 cut(s)	426
Psp124BI	GAGCTC	1 cut(s)	504
Psp1406I	AACGTT	1 cut(s)	444
Psp5II	RGGWCCY	1 cut(s)	988
Psp6I	CCWGG	1 cut(s)	1031
PspFI	CCCAGC	1 cut(s)	105
PspGI	CCWGG	1 cut(s)	1031
PspN4I	GGNNCC	2 cut(s)	955, 990
PspPI	GGNCC	1 cut(s)	988
PspPPI	RGGWCCY	1 cut(s)	988
RsaI	GTAC	7 cut(s)	260, 308, 479, 694, 855, 1222, 1400
RsaNI	GTAC	7 cut(s)	259, 307, 478, 693, 854, 1221, 1399
RseI	CAYNNNNRTG	2 cut(s)	1199, 1571
SacI	GAGCTC	1 cut(s)	504
SaqAI	TTAA	5 cut(s)	252, 891, 1122, 1173, 1182
SatI	GCNGC	9 cut(s)	16, 215, 422, 437, 564, 567, 570, 1308, 1464
Sau3AI	GATC	8 cut(s)	300, 354, 414, 453, 531, 634, 1328, 1545
Sau96I	GGNCC	1 cut(s)	988
ScaI	AGTACT	1 cut(s)	260
ScrFI	CCNGG	1 cut(s)	1033
SduI	GDGCHC	4 cut(s)	317, 504, 603, 687
SfaNI	GCATC	7 cut(s)	615, 894, 966, 1036, 1064, 1294, 1516
SgrAI	CRCCGGYG	1 cut(s)	509
SinI	GGWCC	1 cut(s)	988
SmiMI	CAYNNNNRTG	2 cut(s)	1199, 1571
SmlI	CTYRAG	6 cut(s)	230, 638, 686, 1022, 1121, 1181
SmoI	CTYRAG	6 cut(s)	230, 638, 686, 1022, 1121, 1181
Sse9I	AATT	9 cut(s)	293, 649, 828, 1002, 1170, 1346, 1454, 1512, 1559
SsiI	CCGC	5 cut(s)	215, 513, 567, 570, 1148
SspI	AATATT	1 cut(s)	900
SspMI	CTAG	4 cut(s)	663, 965, 1089, 1379
SstI	GAGCTC	1 cut(s)	504
StyD4I	CCNGG	1 cut(s)	1031
StyI	CCWWGG	1 cut(s)	932
TaaI	ACNGT	3 cut(s)	605, 632, 953
TaiI	ACGT	3 cut(s)	308, 447, 1317
TaqI	TCGA	3 cut(s)	353, 525, 1331
TasI	AATT	9 cut(s)	293, 649, 828, 1002, 1170, 1346, 1454, 1512, 1559
TatI	WGTACW	2 cut(s)	258, 1398
TauI	GCSGC	3 cut(s)	217, 569, 572
Tru1I	TTAA	5 cut(s)	252, 891, 1122, 1173, 1182
Tru9I	TTAA	5 cut(s)	252, 891, 1122, 1173, 1182
TscAI	CASTG	6 cut(s)	204, 216, 687, 760, 1017, 1438
TseFI	GTSAC	1 cut(s)	1266
TseI	GCWGC	6 cut(s)	15, 421, 436, 563, 1307, 1463
Tsp45I	GTSAC	1 cut(s)	1266
TspDTI	ATGAA	6 cut(s)	1109, 1127, 1404, 1467, 1484, 1506
TspGWI	ACGGA	3 cut(s)	332, 710, 1571
TspRI	CASTG	6 cut(s)	204, 216, 687, 760, 1017, 1438
Vha464I	CTTAAG	2 cut(s)	1121, 1181
VneI	GTGCAC	2 cut(s)	313, 599
VpaK11BI	GGWCC	1 cut(s)	988
XapI	RAATTY	3 cut(s)	649, 1346, 1559
XbaI	TCTAGA	1 cut(s)	1088
XceI	RCATGY	1 cut(s)	430
XmiI	GTMKAC	2 cut(s)	326, 735
XmnI	GAANNNNTTC	1 cut(s)	1006
XspI	CTAG	4 cut(s)	663, 965, 1089, 1379
ZrmI	AGTACT	1 cut(s)	260
Zsp2I	ATGCAT	1 cut(s)	1368

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.