Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Contig01092

Orthogroup ID

OG0002696

Physical Location & Seq

Genomic Coordinates Reverse (-)

4855 .. 8191

Gene Structure 3337 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw0G023540.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1590 bp

ATGGGTTGCTGTGGCAGCAAGACCAAACCCAATAATGGGTATGTCTCCTCTTCCATACCCATCTCTCACCACCACCCACAACAGCAATCCTTGTCTGTCTCAACCCAGCAACCTCACAAAGTTTCAGCTCCCCCAACCCATAACCCACCTCCACCACCCCAACCCCAATACCAACCACCAAAGCCACACCCACAGCCAGTGAAGCCAGCAGTGCCGCCAAACAGCATTCTTGAGAAGCCCTTTGATGACATTAAGCAGTACTACACTCTGGGCAAAGAACTGGGCAGAGGCCAATTTGGGATCACGTACTTGTGCACAGAGAAGTCTACGGGTGATACATATGCCTGCAAGTCGATCTTGAAGCGCAAGCTGGTGAGTAAAAGTGATAGGAATGATATCAAGAGAGAGATACAGATCATGCAGCACATGTCTGGGCAGCCCAACGTTGTGGAGATCAAGGGGGCTTATGAGGACAGGTACTCTGTGCATTTGGTGATGGAGCTCTGCGCCGGCGGGGAGCTTTTCGATAGGATCATAGCGCAGGGAGTGTATTCGGAGAGAGCTGCCGCCGCGATTGTGAGGGACATTGTGAATGTTGTGCACAGTTGTCATGTTATGGCTGTGATGCACCGTGATCTCAAGCCCGAGAATTTCTTGCTGTCTAGTAAGGGGGAAGGGGCAGTGCTCAAGGGTACGGATTTCGGGTTGTCTGTTTTTATTGAGGAAGGGAAGGTATACCGAGATATAGTAGGCAGTGCTTACTATGTTGCTCCTGAAGTGTTACGGCGTAGTTATGGAAAGGAGATAGATATTTGGAGTGCTGGAGTAATTCTGTATATTCTACTTAGTGGAGTACCTCCATTTTGGGCTGAGACTGAGAGGGGCATCTTTAATGCAATATTGGAAGGTGTAGTTGACTTTGAAAGTCAACCATGGCCGTCAATATCAGACGGTGCCAAAGACCTAGTTAGAAAGATGCTGACACAGGACCCAAAAAAGAGAATTACTTCACTGAAAGTTCTTGTAGGTGGAGAAGCATCAGACAAGCCAATAGATAGTGCAGTTCTCTCTAGAATGAAGCAGTTGAGAGCAATGAATAAGCTTAAGAAGCTTGCCTTGAAGGTAATAGCGGAAAATCTATCTGAAGAAGAAATTAAAGGTCTTAAGGCAATGTTCACCAGTATGGACACCGACAAAAGTGGTACAATAACCTACGAAGAACTGAAGACAGGATTAGCTCGTATTGGGTCACGGCTATCAGAAACCGAAGTCAGGCAACTAATGGATGCTGCTGACGTTGATGGAAATGGATCGATTGACTATATTGAATTTATATCTGCTACTATGCATAGACAAAGACTAGAGAGAGATGAACACCTGTACAAAGCATTTCAGTATTTTGACAAGGATAGCAGTGGGTATATAACAAGAGATGAATTAGAGGCTGCTATGAAGGAGCATGGAATGGGTGATGAAAACACTATCAAAGAAATAATTTCCGAGGTTGATGCAGATAATGACGGGAGGATCAACTACACGGAATTCTGCACAATGATGAGAAGTGGAAATCAACCCACAAGGCACTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009506 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009751 GO:0009755 GO:0009931 GO:0009987 GO:0010033 GO:0010857 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0019899 GO:0019902 GO:0019903 GO:0023052 GO:0030054 GO:0032870 GO:0033993 GO:0035556 GO:0036211 GO:0042221 GO:0042493 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0046677 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0097305 GO:0097306 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko04626 ko05145 map04626 map05145

Pfam Domains

Protein Families

EF-hand_1 EF-hand_5 EF-hand_7 Pkinase

Protein Analysis

529

Amino Acids

59.03

Weight (kDa)

6.46

Isoelectric Point (pI)

39.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	88 - 340	3.1e-71	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	89 - 336	1.5e-24	Protein tyrosine and serine/threonine kinase
EF-hand_7	PF13499	387 - 448	3.7e-12	EF-hand domain pair
EF-hand_1	PF00036	388 - 414	2.7e-06	EF hand domain
EF-hand_8	PF13833	400 - 448	2.8e-06	EF-hand domain pair
EF-hand_7	PF13499	458 - 520	1.7e-16	EF-hand domain pair
EF-hand_1	PF00036	460 - 486	1.1e-06	EF hand domain
EF-hand_6	PF13405	460 - 488	3.2e-07	EF-hand domain
EF-hand_8	PF13833	471 - 520	1.6e-08	EF-hand domain pair
EF-hand_1	PF00036	495 - 521	5.6e-08	EF hand domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002696)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G61950 AT4G04710 AT4G04710 AT4G04710 AT4G04710 AT4G04720 AT4G04720 AT4G04740 AT4G04740 AT4G04740 AT4G04740 AT4G04740 AT4G04740 AT4G04740 AT4G21940 AT4G21940 AT4G21940
fragaria_vesca	FvH4_3g02130 FvH4_3g02130 FvH4_3g02130 FvH4_3g02130 FvH4_3g02130
malus_domestica	MD05G1345600.v1.1 MD10G1321000.v1.1
prunus_persica	Prupe.4G021300_v2.0.a1
pyrus_communis	pycom11g19140
rosa_chinensis	RchiOBHm_Chr5g0003201
rosa_laevigata	RLG00000031086
rosa_multiflora	Rmu_co8095158.1_g000001 Rmu_co8435131.1_g000001 Rmu_sc0000146.1_g000036
rosa_roxburghii	Rroxscaffold_1G00072810
rosa_rugosa	Rorug04G0401400
rosa_samantha	Rh5AG026300 Rh5BG027500 Rh5CG029100 Rh5DG025900
rosa_wichuraiana	Rw0G023540 Rw5G002430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	953
AccI	GTMKAC	2 cut(s)	326, 735
AccII	CGCG	1 cut(s)	572
AciI	CCGC	5 cut(s)	215, 513, 567, 570, 1130
AclI	AACGTT	1 cut(s)	444
AclWI	GGATC	4 cut(s)	308, 539, 1318, 1535
AcoI	YGGCCR	1 cut(s)	935
AcsI	RAATTY	3 cut(s)	649, 1328, 1541
AcuI	CTGAAG	3 cut(s)	795, 1164, 1244
AfaI	GTAC	7 cut(s)	260, 308, 479, 694, 855, 1204, 1382
AfiI	CCNNNNNNNGG	3 cut(s)	35, 36, 1272
AflII	CTTAAG	2 cut(s)	1103, 1163
AflIII	ACRYGT	1 cut(s)	426
AgsI	TTSAA	4 cut(s)	361, 923, 1120, 1328
AluBI	AGCT	8 cut(s)	128, 370, 502, 520, 563, 1102, 1111, 1238
AluI	AGCT	8 cut(s)	128, 370, 502, 520, 563, 1102, 1111, 1238
Alw21I	GWGCWC	4 cut(s)	317, 504, 603, 687
Alw26I	GTCTC	3 cut(s)	49, 103, 866
Alw44I	GTGCAC	2 cut(s)	313, 599
AlwI	GGATC	4 cut(s)	308, 539, 1318, 1535
Ama87I	CYCGRG	1 cut(s)	644
AoxI	GGCC	2 cut(s)	289, 935
ApaLI	GTGCAC	2 cut(s)	313, 599
ApeKI	GCWGC	6 cut(s)	15, 421, 436, 563, 1289, 1445
ApoI	RAATTY	3 cut(s)	649, 1328, 1541
Asp700I	GAANNNNTTC	1 cut(s)	1006
AspLEI	GCGC	3 cut(s)	366, 509, 541
AspS9I	GGNCC	1 cut(s)	988
AsuHPI	GGTGA	6 cut(s)	59, 344, 385, 505, 1168, 1481
AvaI	CYCGRG	1 cut(s)	644
AvaII	GGWCC	1 cut(s)	988
BaeGI	GKGCMC	2 cut(s)	317, 603
BanI	GGYRCC	1 cut(s)	953
BanII	GRGCYC	1 cut(s)	504
BbsI	GAAGAC	1 cut(s)	1232
Bbv12I	GWGCWC	4 cut(s)	317, 504, 603, 687
BbvI	GCAGC	6 cut(s)	27, 433, 448, 550, 1276, 1432
BccI	CCATC	3 cut(s)	68, 490, 1295
BceAI	ACGGC	3 cut(s)	800, 922, 1268
BcgI	CGANNNNNNTGC	2 cut(s)	1490, 1524
BcoDI	GTCTC	3 cut(s)	49, 103, 866
BfaI	CTAG	4 cut(s)	663, 965, 1071, 1361
BfrI	CTTAAG	2 cut(s)	1103, 1163
BisI	GCNGC	9 cut(s)	16, 215, 422, 437, 564, 567, 570, 1290, 1446
BlsI	GCNGC	9 cut(s)	17, 216, 423, 438, 565, 568, 571, 1291, 1447
BmcAI	AGTACT	1 cut(s)	260
Bme18I	GGWCC	1 cut(s)	988
BmeT110I	CYCGRG	1 cut(s)	644
BmgT120I	GGNCC	1 cut(s)	988
BmiI	GGNNCC	2 cut(s)	955, 990
BmrI	ACTGGG	1 cut(s)	290
BmsI	GCATC	6 cut(s)	615, 894, 966, 1046, 1276, 1498
BmuI	ACTGGG	1 cut(s)	290
BpiI	GAAGAC	1 cut(s)	1232
BpmI	CTGGAG	1 cut(s)	843
BpuEI	CTTGAG	3 cut(s)	251, 623, 671
Bsa29I	ATCGAT	1 cut(s)	1313
BsaAI	YACGTR	1 cut(s)	306
BsaBI	GATNNNNATC	1 cut(s)	413
BsaJI	CCNNGG	2 cut(s)	932, 1500
Bsc4I	CCNNNNNNNGG	3 cut(s)	35, 36, 1272
Bse118I	RCCGGY	1 cut(s)	509
Bse1I	ACTGG	3 cut(s)	197, 285, 1179
Bse3DI	GCAATG	2 cut(s)	1098, 1176
Bse8I	GATNNNNATC	1 cut(s)	413
BseCI	ATCGAT	1 cut(s)	1313
BseDI	CCNNGG	2 cut(s)	932, 1500
BseGI	GGATG	1 cut(s)	1291
BseJI	GATNNNNATC	1 cut(s)	413
BseLI	CCNNNNNNNGG	3 cut(s)	35, 36, 1272
BseMI	GCAATG	2 cut(s)	1098, 1176
BseMII	CTCAG	2 cut(s)	861, 867
BseNI	ACTGG	3 cut(s)	197, 285, 1179
BseRI	GAGGAG	1 cut(s)	37
BseSI	GKGCMC	2 cut(s)	317, 603
BseXI	GCAGC	6 cut(s)	27, 433, 448, 550, 1276, 1432
BseYI	CCCAGC	1 cut(s)	105
BsgI	GTGCAG	2 cut(s)	1080, 1531
Bsh1236I	CGCG	1 cut(s)	572
BshFI	GGCC	2 cut(s)	291, 937
BshNI	GGYRCC	1 cut(s)	953
BshVI	ATCGAT	1 cut(s)	1313
BsiHKAI	GWGCWC	4 cut(s)	317, 504, 603, 687
BsiHKCI	CYCGRG	1 cut(s)	644
BsiSI	CCGG	1 cut(s)	510
BslFI	GGGAC	1 cut(s)	596
BslI	CCNNNNNNNGG	3 cut(s)	35, 36, 1272
BsmAI	GTCTC	3 cut(s)	49, 103, 866
BsmFI	GGGAC	1 cut(s)	596
BsmI	GAATGC	1 cut(s)	225
BsnI	GGCC	2 cut(s)	291, 937
BsoBI	CYCGRG	1 cut(s)	644
Bsp1286I	GDGCHC	4 cut(s)	317, 504, 603, 687
Bsp1407I	TGTACA	1 cut(s)	1380
Bsp143I	GATC	8 cut(s)	300, 354, 414, 453, 531, 634, 1310, 1527
Bsp19I	CCATGG	1 cut(s)	932
BspACI	CCGC	5 cut(s)	215, 513, 567, 570, 1130
BspANI	GGCC	2 cut(s)	291, 937
BspCNI	CTCAG	2 cut(s)	862, 868
BspDI	ATCGAT	1 cut(s)	1313
BspFNI	CGCG	1 cut(s)	572
BspLI	GGNNCC	2 cut(s)	955, 990
BspPI	GGATC	4 cut(s)	308, 539, 1318, 1535
BspT107I	GGYRCC	1 cut(s)	953
BspTI	CTTAAG	2 cut(s)	1103, 1163
BsrDI	GCAATG	2 cut(s)	1098, 1176
BsrFI	RCCGGY	1 cut(s)	509
BsrGI	TGTACA	1 cut(s)	1380
BsrI	ACTGG	3 cut(s)	197, 285, 1179
BssAI	RCCGGY	1 cut(s)	509
BssECI	CCNNGG	2 cut(s)	932, 1500
BssMI	GATC	8 cut(s)	300, 354, 414, 453, 531, 634, 1310, 1527
BssNAI	GTATAC	1 cut(s)	736
BssT1I	CCWWGG	1 cut(s)	932
Bst1107I	GTATAC	1 cut(s)	736
Bst4CI	ACNGT	3 cut(s)	605, 632, 953
Bst6I	CTCTTC	1 cut(s)	55
BstAFI	CTTAAG	2 cut(s)	1103, 1163
BstAUI	TGTACA	1 cut(s)	1380
BstBAI	YACGTR	1 cut(s)	306
BstC8I	GCNNGC	5 cut(s)	207, 346, 368, 511, 1113
BstDEI	CTNAG	3 cut(s)	845, 870, 876
BstDSI	CCRYGG	1 cut(s)	932
BstF5I	GGATG	1 cut(s)	1291
BstFNI	CGCG	1 cut(s)	572
BstHHI	GCGC	3 cut(s)	366, 509, 541
BstKTI	GATC	8 cut(s)	303, 357, 417, 456, 534, 637, 1313, 1530
BstMAI	GTCTC	3 cut(s)	49, 103, 866
BstMBI	GATC	8 cut(s)	300, 354, 414, 453, 531, 634, 1310, 1527
BstMWI	GCNNNNNNNGC	5 cut(s)	15, 202, 211, 569, 1108
BstNSI	RCATGY	1 cut(s)	430
BstSLI	GKGCMC	2 cut(s)	317, 603
BstUI	CGCG	1 cut(s)	572
BstV1I	GCAGC	6 cut(s)	27, 433, 448, 550, 1276, 1432
BstV2I	GAAGAC	1 cut(s)	1232
BstXI	CCANNNNNNTGG	1 cut(s)	448
BstZ17I	GTATAC	1 cut(s)	736
Bsu15I	ATCGAT	1 cut(s)	1313
BsuRI	GGCC	2 cut(s)	291, 937
BsuTUI	ATCGAT	1 cut(s)	1313
BtgI	CCRYGG	1 cut(s)	932
BtsCI	GGATG	1 cut(s)	1291
BtsI	GCAGTG	4 cut(s)	216, 687, 760, 1420
BtsIMutI	CAGTG	6 cut(s)	204, 216, 687, 760, 1010, 1420
Cac8I	GCNNGC	5 cut(s)	207, 346, 368, 511, 1113
CfoI	GCGC	3 cut(s)	366, 509, 541
Cfr10I	RCCGGY	1 cut(s)	509
Cfr13I	GGNCC	1 cut(s)	988
ClaI	ATCGAT	1 cut(s)	1313
Csp6I	GTAC	7 cut(s)	259, 307, 478, 693, 854, 1203, 1381
CviAII	CATG	5 cut(s)	418, 427, 611, 933, 1460
CviQI	GTAC	7 cut(s)	259, 307, 478, 693, 854, 1203, 1381
DdeI	CTNAG	3 cut(s)	845, 870, 876
DpnI	GATC	8 cut(s)	302, 356, 416, 455, 533, 636, 1312, 1529
DpnII	GATC	8 cut(s)	300, 354, 414, 453, 531, 634, 1310, 1527
EaeI	YGGCCR	1 cut(s)	935
Eam1104I	CTCTTC	1 cut(s)	55
EarI	CTCTTC	1 cut(s)	55
Ecl136II	GAGCTC	1 cut(s)	502
Eco130I	CCWWGG	1 cut(s)	932
Eco24I	GRGCYC	1 cut(s)	504
Eco32I	GATATC	1 cut(s)	397
Eco47I	GGWCC	1 cut(s)	988
Eco53kI	GAGCTC	1 cut(s)	502
Eco57I	CTGAAG	3 cut(s)	795, 1164, 1244
Eco88I	CYCGRG	1 cut(s)	644
EcoICRI	GAGCTC	1 cut(s)	502
EcoO109I	RGGNCCY	1 cut(s)	988
EcoRI	GAATTC	1 cut(s)	1541
EcoRV	GATATC	1 cut(s)	397
EcoT14I	CCWWGG	1 cut(s)	932
EcoT22I	ATGCAT	1 cut(s)	1350
EcoT38I	GRGCYC	1 cut(s)	504
ErhI	CCWWGG	1 cut(s)	932
FaeI	CATG	5 cut(s)	421, 430, 614, 936, 1463
FalI	AAGNNNNNCTT	5 cut(s)	341, 373, 1100, 1132, 1570
FaqI	GGGAC	1 cut(s)	596
FatI	CATG	5 cut(s)	417, 426, 610, 932, 1459
FauI	CCCGC	1 cut(s)	506
FauNDI	CATATG	1 cut(s)	340
FblI	GTMKAC	2 cut(s)	326, 735
Fnu4HI	GCNGC	9 cut(s)	16, 215, 422, 437, 564, 567, 570, 1290, 1446
FokI	GGATG	1 cut(s)	1298
FriOI	GRGCYC	1 cut(s)	504
Fsp4HI	GCNGC	9 cut(s)	16, 215, 422, 437, 564, 567, 570, 1290, 1446
FspBI	CTAG	4 cut(s)	663, 965, 1071, 1361
GlaI	GCGC	3 cut(s)	365, 508, 540
GluI	GCNGC	9 cut(s)	16, 215, 422, 437, 564, 567, 570, 1290, 1446
GsaI	CCCAGC	1 cut(s)	109
GsuI	CTGGAG	1 cut(s)	843
HaeIII	GGCC	2 cut(s)	291, 937
HapII	CCGG	1 cut(s)	510
HhaI	GCGC	3 cut(s)	366, 509, 541
Hin1II	CATG	5 cut(s)	421, 430, 614, 936, 1463
Hin6I	GCGC	3 cut(s)	364, 507, 539
HinP1I	GCGC	3 cut(s)	364, 507, 539
HincII	GTYRAC	2 cut(s)	916, 929
HindII	GTYRAC	2 cut(s)	916, 929
HindIII	AAGCTT	2 cut(s)	1100, 1109
HpaII	CCGG	1 cut(s)	510
HphI	GGTGA	6 cut(s)	59, 344, 385, 505, 1168, 1481
Hpy166II	GTNNAC	7 cut(s)	315, 327, 601, 736, 916, 929, 1176
Hpy188I	TCNGA	6 cut(s)	556, 949, 1042, 1144, 1261, 1501
Hpy188III	TCNNGA	6 cut(s)	230, 358, 400, 773, 1071, 1587
Hpy8I	GTNNAC	7 cut(s)	315, 327, 601, 736, 916, 929, 1176
HpyAV	CCTTC	6 cut(s)	668, 719, 724, 899, 1114, 1447
HpyCH4III	ACNGT	3 cut(s)	605, 632, 953
HpyCH4IV	ACGT	3 cut(s)	305, 444, 1296
HpyF10VI	GCNNNNNNNGC	5 cut(s)	15, 202, 211, 569, 1108
HpyF3I	CTNAG	3 cut(s)	845, 870, 876
HpySE526I	ACGT	3 cut(s)	305, 444, 1296
Hsp92II	CATG	5 cut(s)	421, 430, 614, 936, 1463
HspAI	GCGC	3 cut(s)	364, 507, 539
KroI	GCCGGC	1 cut(s)	509
KroNI	GCCGGC	1 cut(s)	511
Kzo9I	GATC	8 cut(s)	300, 354, 414, 453, 531, 634, 1310, 1527
LmnI	GCTCC	5 cut(s)	133, 499, 517, 775, 1456
Lsp1109I	GCAGC	6 cut(s)	27, 433, 448, 550, 1276, 1432
LweI	GCATC	6 cut(s)	615, 894, 966, 1046, 1276, 1498
MaeI	CTAG	4 cut(s)	663, 965, 1071, 1361
MaeII	ACGT	3 cut(s)	305, 444, 1296
MaeIII	GTNAC	2 cut(s)	780, 1248
MalI	GATC	8 cut(s)	302, 356, 416, 455, 533, 636, 1312, 1529
MboI	GATC	8 cut(s)	300, 354, 414, 453, 531, 634, 1310, 1527
MboII	GAAGA	5 cut(s)	42, 1157, 1160, 1229, 1237
MhlI	GDGCHC	4 cut(s)	317, 504, 603, 687
MluCI	AATT	9 cut(s)	293, 649, 828, 1002, 1152, 1328, 1436, 1494, 1541
Mph1103I	ATGCAT	1 cut(s)	1350
MreI	CGCCGGCG	1 cut(s)	509
MroNI	GCCGGC	1 cut(s)	509
MroXI	GAANNNNTTC	1 cut(s)	1006
MseI	TTAA	5 cut(s)	252, 891, 1104, 1155, 1164
MslI	CAYNNNNRTG	2 cut(s)	1181, 1553
MspCI	CTTAAG	2 cut(s)	1103, 1163
MspI	CCGG	1 cut(s)	510
Mva1269I	GAATGC	1 cut(s)	225
MvnI	CGCG	1 cut(s)	572
MwoI	GCNNNNNNNGC	5 cut(s)	15, 202, 211, 569, 1108
NaeI	GCCGGC	1 cut(s)	511
NcoI	CCATGG	1 cut(s)	932
NdeI	CATATG	1 cut(s)	340
NdeII	GATC	8 cut(s)	300, 354, 414, 453, 531, 634, 1310, 1527
NgoMIV	GCCGGC	1 cut(s)	509
NlaIII	CATG	5 cut(s)	421, 430, 614, 936, 1463
NlaIV	GGNNCC	2 cut(s)	955, 990
NmuCI	GTSAC	1 cut(s)	1248
NsiI	ATGCAT	1 cut(s)	1350
NspI	RCATGY	1 cut(s)	430
PciI	ACATGT	1 cut(s)	426
PctI	GAATGC	1 cut(s)	225
PdiI	GCCGGC	1 cut(s)	511
PdmI	GAANNNNTTC	1 cut(s)	1006
PkrI	GCNGC	9 cut(s)	17, 216, 423, 438, 565, 568, 571, 1291, 1447
Ppu21I	YACGTR	1 cut(s)	306
PpuMI	RGGWCCY	1 cut(s)	988
PscI	ACATGT	1 cut(s)	426
Psp124BI	GAGCTC	1 cut(s)	504
Psp1406I	AACGTT	1 cut(s)	444
Psp5II	RGGWCCY	1 cut(s)	988
PspFI	CCCAGC	1 cut(s)	105
PspN4I	GGNNCC	2 cut(s)	955, 990
PspPI	GGNCC	1 cut(s)	988
PspPPI	RGGWCCY	1 cut(s)	988
RsaI	GTAC	7 cut(s)	260, 308, 479, 694, 855, 1204, 1382
RsaNI	GTAC	7 cut(s)	259, 307, 478, 693, 854, 1203, 1381
RseI	CAYNNNNRTG	2 cut(s)	1181, 1553
SacI	GAGCTC	1 cut(s)	504
SaqAI	TTAA	5 cut(s)	252, 891, 1104, 1155, 1164
SatI	GCNGC	9 cut(s)	16, 215, 422, 437, 564, 567, 570, 1290, 1446
Sau3AI	GATC	8 cut(s)	300, 354, 414, 453, 531, 634, 1310, 1527
Sau96I	GGNCC	1 cut(s)	988
ScaI	AGTACT	1 cut(s)	260
SduI	GDGCHC	4 cut(s)	317, 504, 603, 687
SfaNI	GCATC	6 cut(s)	615, 894, 966, 1046, 1276, 1498
SgrAI	CRCCGGYG	1 cut(s)	509
SinI	GGWCC	1 cut(s)	988
SmiMI	CAYNNNNRTG	2 cut(s)	1181, 1553
SmlI	CTYRAG	5 cut(s)	230, 638, 686, 1103, 1163
SmoI	CTYRAG	5 cut(s)	230, 638, 686, 1103, 1163
Sse9I	AATT	9 cut(s)	293, 649, 828, 1002, 1152, 1328, 1436, 1494, 1541
SsiI	CCGC	5 cut(s)	215, 513, 567, 570, 1130
SspI	AATATT	1 cut(s)	900
SspMI	CTAG	4 cut(s)	663, 965, 1071, 1361
SstI	GAGCTC	1 cut(s)	504
StyI	CCWWGG	1 cut(s)	932
TaaI	ACNGT	3 cut(s)	605, 632, 953
TaiI	ACGT	3 cut(s)	308, 447, 1299
TaqI	TCGA	3 cut(s)	353, 525, 1313
TasI	AATT	9 cut(s)	293, 649, 828, 1002, 1152, 1328, 1436, 1494, 1541
TatI	WGTACW	2 cut(s)	258, 1380
TauI	GCSGC	3 cut(s)	217, 569, 572
Tru1I	TTAA	5 cut(s)	252, 891, 1104, 1155, 1164
Tru9I	TTAA	5 cut(s)	252, 891, 1104, 1155, 1164
TscAI	CASTG	6 cut(s)	204, 216, 687, 760, 1017, 1420
TseFI	GTSAC	1 cut(s)	1248
TseI	GCWGC	6 cut(s)	15, 421, 436, 563, 1289, 1445
Tsp45I	GTSAC	1 cut(s)	1248
TspDTI	ATGAA	6 cut(s)	1091, 1109, 1386, 1449, 1466, 1488
TspGWI	ACGGA	2 cut(s)	710, 1553
TspRI	CASTG	6 cut(s)	204, 216, 687, 760, 1017, 1420
Vha464I	CTTAAG	2 cut(s)	1103, 1163
VneI	GTGCAC	2 cut(s)	313, 599
VpaK11BI	GGWCC	1 cut(s)	988
XapI	RAATTY	3 cut(s)	649, 1328, 1541
XbaI	TCTAGA	1 cut(s)	1070
XceI	RCATGY	1 cut(s)	430
XmiI	GTMKAC	2 cut(s)	326, 735
XmnI	GAANNNNTTC	1 cut(s)	1006
XspI	CTAG	4 cut(s)	663, 965, 1071, 1361
ZrmI	AGTACT	1 cut(s)	260
Zsp2I	ATGCAT	1 cut(s)	1350

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.