AT4G04740

Calcium-dependent protein kinase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Reverse (-)
2402897 .. 2408737
5841 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G04740.6

Sequence Viewer

Length: 1563 bp
ATGGGTTGTTTCAGCAGTAAACACCGGAAAACTCAAAACGACGGCGGCGGAGAAAGATCAATTCCGATAATTCCAGTTCAAACCCATATCGTTGATCAAGTCCCCGATCATCGTAAACCTCAAATCCCATCACCATCGATACCCATCTCAGTTCGAGATCCAGAGACGATTTTAGGTAAACCATTCGAAGACATCAGGAAATTTTACAGCTTGGGGAGAGAATTAGGTCGAGGTGGTTTAGGGATTACGTATATGTGCAAAGAGATTGGGACTGGGAACATTTATGCTTGCAAATCGATTCTCAAGAGGAAGCTAATTAGTGAGCTGGGTAGAGAAGATGTGAAGACAGAGATTCAGATCATGCAGCATTTGTCTGGACAACCAAACGTTGTTGAGATCAAAGGTTCTTATGAAGACAGACATTCTGTACATTTGGTAATGGAATTATGTGCCGGTGGAGAGTTGTTTGATAGGATTATAGCTCAAGGTCATTACTCTGAGAGAGCTGCTGCTGGTACCATTAAGTCAATTGTGGATGTTGTTCAGATTTGTCATTTGAATGGTGTGATTCATCGAGATCTCAAGCCTGAGAATTTCTTGTTCTCGAGTAAGGAGGAGAATGCAATGCTTAAAGTAACCGATTTCGGGTTGTCCGCGTTCATCGAAGAAGGAAAAATTTACAAGGATGTGGTTGGGAGTCCTTACTACGTTGCTCCTGAAGTATTAAGGCAGAGTTACGGAAAAGAAATCGACATTTGGAGTGCAGGTGTTATTTTATACATCCTACTCTGCGGTGTACCTCCTTTTTGGGCCGACAATGAAGAAGGAGTATTCGTTGAAATTCTAAAATGCAAAATTGATTTTGTACGTGAGCCATGGCCTTCTATATCTGACAGCGCGAAAGATCTTGTTGAGAAGATGCTAACCGAAGACCCTAAGAGACGAATCACTGCTGCACAAGTTCTTGAACATCCTTGGATCAAAGGGGGAGAAGCACCGGAAAAGCCTATTGATAGCACTGTGTTATCACGTATGAAGCAATTCCGAGCAATGAACAAGCTTAAGAAGCTAGCCCTAAAGGTTAGCGCGGTGAGTCTATCCGAAGAAGAGATCAAAGGTCTTAAAACCTTGTTTGCGAATATGGATACCAATAGAAGCGGGACAATCACTTATGAACAACTCCAAACTGGGCTAAGTAGACTTAGATCTAGACTCTCTGAAACTGAAGTTCAGCAACTCGTTGAAGCGTCTGATGTGGATGGTAATGGAACAATTGACTACTATGAGTTTATCTCTGCGACAATGCATAGATACAAATTACATCACGATGAGCACGTACACAAAGCATTCCAACACTTAGATAAAGACAAAAATGGGCACATAACTAGGGATGAGTTGGAAAGTGCCATGAAGGAATATGGAATGGGAGATGAAGCTAGCATCAAAGAAGTTATATCCGAAGTTGACACCGACAATGATGGAAAAATAAACTTTGAGGAATTTCGTGCGATGATGAGATGTGGCACCACACAACCAAAAGGGAAACAGTATCCATTCCACTGA

Protein Analysis

520

Amino Acids

58.65

Weight (kDa)

6.09

Isoelectric Point (pI)

40.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 69 - 327 9e-76 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 71 - 323 6e-23 Protein tyrosine and serine/threonine kinase
EF-hand_7 PF13499 373 - 434 2.4e-11 EF-hand domain pair
EF-hand_7 PF13499 444 - 506 3e-16 EF-hand domain pair
EF-hand_1 PF00036 446 - 472 6.7e-07 EF hand domain
EF-hand_6 PF13405 447 - 474 9.2e-07 EF-hand domain
EF-hand_8 PF13833 458 - 505 1.6e-08 EF-hand domain pair
EF-hand_1 PF00036 481 - 506 5.3e-09 EF hand domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 755
Acc36I ACCTGC 1 cut(s) 755
Acc65I GGTACC 1 cut(s) 515
AccB1I GGYRCC 2 cut(s) 515, 1523
AccI GTMKAC 1 cut(s) 1198
AccII CGCG 3 cut(s) 656, 899, 1088
AciI CCGC 6 cut(s) 45, 48, 654, 792, 1088, 1158
AclI AACGTT 1 cut(s) 387
AclWI GGATC 2 cut(s) 152, 986
AcsI RAATTY 5 cut(s) 200, 592, 675, 840, 1499
AcuI CTGAAG 2 cut(s) 738, 1245
AfaI GTAC 5 cut(s) 429, 517, 798, 867, 1338
AfiI CCNNNNNNNGG 1 cut(s) 645
AflII CTTAAG 1 cut(s) 1061
AgsI TTSAA 5 cut(s) 80, 559, 839, 968, 1244
AluBI AGCT 8 cut(s) 210, 313, 325, 482, 506, 1060, 1069, 1436
AluI AGCT 8 cut(s) 210, 313, 325, 482, 506, 1060, 1069, 1436
Alw21I GWGCWC 1 cut(s) 1335
Alw26I GTCTC 2 cut(s) 158, 934
AlwI GGATC 2 cut(s) 152, 986
Ama87I CYCGRG 1 cut(s) 604
AoxI GGCC 2 cut(s) 810, 878
ApeKI GCWGC 4 cut(s) 364, 506, 509, 953
ApoI RAATTY 5 cut(s) 200, 592, 675, 840, 1499
Asp700I GAANNNNTTC 1 cut(s) 1040
Asp718I GGTACC 1 cut(s) 515
AspLEI GCGC 2 cut(s) 899, 1088
AspS9I GGNCC 1 cut(s) 810
AsuHPI GGTGA 2 cut(s) 123, 1102
AsuII TTCGAA 1 cut(s) 186
AsuNHI GCTAGC 2 cut(s) 1069, 1436
AvaI CYCGRG 1 cut(s) 604
BaeGI GKGCMC 1 cut(s) 1380
BanI GGYRCC 2 cut(s) 515, 1523
BbsI GAAGAC 4 cut(s) 195, 350, 420, 936
Bbv12I GWGCWC 1 cut(s) 1335
BbvI GCAGC 4 cut(s) 376, 493, 496, 940
BccI CCATC 5 cut(s) 136, 142, 152, 1253, 1472
BceAI ACGGC 1 cut(s) 58
BciVI GTATCC 2 cut(s) 1138, 1560
BclI TGATCA 1 cut(s) 94
BcoDI GTCTC 2 cut(s) 158, 934
BfaI CTAG 4 cut(s) 1070, 1209, 1386, 1437
BfrI CTTAAG 1 cut(s) 1061
BfuAI ACCTGC 1 cut(s) 755
BfuI GTATCC 2 cut(s) 1138, 1560
BglII AGATCT 3 cut(s) 577, 904, 1205
BisI GCNGC 5 cut(s) 46, 365, 507, 510, 954
BlsI GCNGC 5 cut(s) 47, 366, 508, 511, 955
BmeT110I CYCGRG 1 cut(s) 604
BmgT120I GGNCC 1 cut(s) 810
BmiI GGNNCC 2 cut(s) 517, 1525
BmrI ACTGGG 2 cut(s) 282, 1197
BmsI GCATC 2 cut(s) 909, 1449
BmtI GCTAGC 2 cut(s) 1073, 1440
BmuI ACTGGG 2 cut(s) 282, 1197
BpiI GAAGAC 4 cut(s) 195, 350, 420, 936
BplI GAGNNNNNCTC 2 cut(s) 1277, 1309
Bpu14I TTCGAA 1 cut(s) 186
BpuEI CTTGAG 3 cut(s) 287, 468, 566
Bsa29I ATCGAT 2 cut(s) 137, 296
BsaAI YACGTR 4 cut(s) 249, 869, 1031, 1336
BsaBI GATNNNNATC 2 cut(s) 143, 356
BsaJI CCNNGG 2 cut(s) 875, 974
BsaWI WCCGGW 2 cut(s) 24, 997
BsaXI ACNNNNNCTCC 4 cut(s) 751, 781, 819, 849
Bsc4I CCNNNNNNNGG 1 cut(s) 645
Bse118I RCCGGY 1 cut(s) 452
Bse1I ACTGG 3 cut(s) 74, 277, 1192
Bse3DI GCAATG 2 cut(s) 630, 1056
Bse8I GATNNNNATC 2 cut(s) 143, 356
BseCI ATCGAT 2 cut(s) 137, 296
BseDI CCNNGG 2 cut(s) 875, 974
BseGI GGATG 6 cut(s) 541, 691, 780, 970, 1264, 1396
BseJI GATNNNNATC 2 cut(s) 143, 356
BseLI CCNNNNNNNGG 1 cut(s) 645
BseMI GCAATG 2 cut(s) 630, 1056
BseMII CTCAG 3 cut(s) 162, 489, 579
BseNI ACTGG 3 cut(s) 74, 277, 1192
BseRI GAGGAG 1 cut(s) 629
BseSI GKGCMC 1 cut(s) 1380
BseXI GCAGC 4 cut(s) 376, 493, 496, 940
BseYI CCCAGC 1 cut(s) 325
BsgI GTGCAG 2 cut(s) 783, 939
Bsh1236I CGCG 3 cut(s) 656, 899, 1088
BshFI GGCC 2 cut(s) 812, 880
BshNI GGYRCC 2 cut(s) 515, 1523
BshVI ATCGAT 2 cut(s) 137, 296
BsiHKAI GWGCWC 1 cut(s) 1335
BsiHKCI CYCGRG 1 cut(s) 604
BsiSI CCGG 3 cut(s) 25, 453, 998
BslFI GGGAC 3 cut(s) 86, 283, 1174
BslI CCNNNNNNNGG 1 cut(s) 645
BsmAI GTCTC 2 cut(s) 158, 934
BsmBI CGTCTC 2 cut(s) 158, 934
BsmFI GGGAC 3 cut(s) 86, 283, 1174
BsmI GAATGC 2 cut(s) 625, 1346
BsnI GGCC 2 cut(s) 812, 880
BsoBI CYCGRG 1 cut(s) 604
Bsp119I TTCGAA 1 cut(s) 186
Bsp1286I GDGCHC 2 cut(s) 1335, 1380
Bsp1407I TGTACA 1 cut(s) 427
Bsp19I CCATGG 1 cut(s) 875
BspACI CCGC 6 cut(s) 45, 48, 654, 792, 1088, 1158
BspANI GGCC 2 cut(s) 812, 880
BspCNI CTCAG 3 cut(s) 161, 490, 580
BspDI ATCGAT 2 cut(s) 137, 296
BspFNI CGCG 3 cut(s) 656, 899, 1088
BspLI GGNNCC 2 cut(s) 517, 1525
BspMI ACCTGC 1 cut(s) 755
BspOI GCTAGC 2 cut(s) 1073, 1440
BspPI GGATC 2 cut(s) 152, 986
BspT104I TTCGAA 1 cut(s) 186
BspT107I GGYRCC 2 cut(s) 515, 1523
BspTI CTTAAG 1 cut(s) 1061
BsrDI GCAATG 2 cut(s) 630, 1056
BsrFI RCCGGY 1 cut(s) 452
BsrGI TGTACA 1 cut(s) 427
BsrI ACTGG 3 cut(s) 74, 277, 1192
BssAI RCCGGY 1 cut(s) 452
BssECI CCNNGG 2 cut(s) 875, 974
BssT1I CCWWGG 2 cut(s) 875, 974
Bst4CI ACNGT 2 cut(s) 1021, 1548
Bst6I CTCTTC 1 cut(s) 1101
BstAFI CTTAAG 1 cut(s) 1061
BstAUI TGTACA 1 cut(s) 427
BstBAI YACGTR 4 cut(s) 249, 869, 1031, 1336
BstBI TTCGAA 1 cut(s) 186
BstC8I GCNNGC 3 cut(s) 289, 1071, 1438
BstDEI CTNAG 7 cut(s) 148, 498, 588, 936, 1193, 1202, 1357
BstDSI CCRYGG 1 cut(s) 875
BstF5I GGATG 6 cut(s) 541, 691, 780, 970, 1264, 1396
BstFNI CGCG 3 cut(s) 656, 899, 1088
BstHHI GCGC 2 cut(s) 899, 1088
BstMAI GTCTC 2 cut(s) 158, 934
BstMWI GCNNNNNNNGC 1 cut(s) 1066
BstSLI GKGCMC 1 cut(s) 1380
BstSNI TACGTA 1 cut(s) 249
BstUI CGCG 3 cut(s) 656, 899, 1088
BstV1I GCAGC 4 cut(s) 376, 493, 496, 940
BstV2I GAAGAC 4 cut(s) 195, 350, 420, 936
BstX2I RGATCY 4 cut(s) 157, 577, 904, 1205
BstYI RGATCY 4 cut(s) 157, 577, 904, 1205
Bsu15I ATCGAT 2 cut(s) 137, 296
BsuI GTATCC 2 cut(s) 1138, 1560
BsuRI GGCC 2 cut(s) 812, 880
BsuTUI ATCGAT 2 cut(s) 137, 296
BtgI CCRYGG 1 cut(s) 875
BtgZI GCGATG 1 cut(s) 1523
BtsCI GGATG 6 cut(s) 541, 691, 780, 970, 1264, 1396
BtsI GCAGTG 1 cut(s) 948
BtsIMutI CAGTG 3 cut(s) 948, 1017, 1558
BveI ACCTGC 1 cut(s) 755
Cac8I GCNNGC 3 cut(s) 289, 1071, 1438
CfoI GCGC 2 cut(s) 899, 1088
Cfr10I RCCGGY 1 cut(s) 452
Cfr13I GGNCC 1 cut(s) 810
ClaI ATCGAT 2 cut(s) 137, 296
CseI GACGC 1 cut(s) 1236
Csp6I GTAC 5 cut(s) 428, 516, 797, 866, 1337
CviAII CATG 3 cut(s) 361, 876, 1408
CviQI GTAC 5 cut(s) 428, 516, 797, 866, 1337
DdeI CTNAG 7 cut(s) 148, 498, 588, 936, 1193, 1202, 1357
Eam1104I CTCTTC 1 cut(s) 1101
EarI CTCTTC 1 cut(s) 1101
EciI GGCGGA 1 cut(s) 63
Eco105I TACGTA 1 cut(s) 249
Eco130I CCWWGG 2 cut(s) 875, 974
Eco57I CTGAAG 2 cut(s) 738, 1245
Eco88I CYCGRG 1 cut(s) 604
EcoT14I CCWWGG 2 cut(s) 875, 974
EcoT22I ATGCAT 1 cut(s) 1308
ErhI CCWWGG 2 cut(s) 875, 974
Esp3I CGTCTC 2 cut(s) 158, 934
FaeI CATG 3 cut(s) 364, 879, 1411
FaqI GGGAC 3 cut(s) 86, 283, 1174
FatI CATG 3 cut(s) 360, 875, 1407
FauI CCCGC 1 cut(s) 1151
FbaI TGATCA 1 cut(s) 94
FblI GTMKAC 1 cut(s) 1198
Fnu4HI GCNGC 5 cut(s) 46, 365, 507, 510, 954
FokI GGATG 6 cut(s) 548, 698, 767, 957, 1271, 1403
Fsp4HI GCNGC 5 cut(s) 46, 365, 507, 510, 954
FspBI CTAG 4 cut(s) 1070, 1209, 1386, 1437
GlaI GCGC 2 cut(s) 898, 1087
GluI GCNGC 5 cut(s) 46, 365, 507, 510, 954
GsaI CCCAGC 1 cut(s) 329
HaeIII GGCC 2 cut(s) 812, 880
HapII CCGG 3 cut(s) 25, 453, 998
HgaI GACGC 1 cut(s) 1236
HhaI GCGC 2 cut(s) 899, 1088
Hin1II CATG 3 cut(s) 364, 879, 1411
Hin6I GCGC 2 cut(s) 897, 1086
HinP1I GCGC 2 cut(s) 897, 1086
HincII GTYRAC 1 cut(s) 1465
HindII GTYRAC 1 cut(s) 1465
HindIII AAGCTT 1 cut(s) 1058
HinfI GANTC 7 cut(s) 298, 352, 568, 697, 945, 1093, 1212
HpaII CCGG 3 cut(s) 25, 453, 998
HphI GGTGA 2 cut(s) 123, 1102
Hpy166II GTNNAC 7 cut(s) 20, 116, 179, 797, 1199, 1339, 1465
Hpy8I GTNNAC 7 cut(s) 20, 116, 179, 797, 1199, 1339, 1465
Hpy99I CGWCG 1 cut(s) 44
HpyAV CCTTC 4 cut(s) 662, 818, 891, 1405
HpyCH4III ACNGT 2 cut(s) 1021, 1548
HpyCH4IV ACGT 6 cut(s) 248, 387, 708, 868, 1030, 1335
HpyCH4V TGCA 8 cut(s) 258, 291, 364, 623, 764, 852, 956, 1306
HpyF10VI GCNNNNNNNGC 1 cut(s) 1066
HpyF3I CTNAG 7 cut(s) 148, 498, 588, 936, 1193, 1202, 1357
HpySE526I ACGT 6 cut(s) 248, 387, 708, 868, 1030, 1335
Hsp92II CATG 3 cut(s) 364, 879, 1411
HspAI GCGC 2 cut(s) 897, 1086
KpnI GGTACC 1 cut(s) 519
Ksp22I TGATCA 1 cut(s) 94
LmnI GCTCC 1 cut(s) 718
Lsp1109I GCAGC 4 cut(s) 376, 493, 496, 940
LweI GCATC 2 cut(s) 909, 1449
MaeI CTAG 4 cut(s) 1070, 1209, 1386, 1437
MaeII ACGT 6 cut(s) 248, 387, 708, 868, 1030, 1335
MaeIII GTNAC 2 cut(s) 634, 734
MfeI CAATTG 2 cut(s) 528, 1272
MflI RGATCY 4 cut(s) 157, 577, 904, 1205
MhlI GDGCHC 2 cut(s) 1335, 1380
MlyI GAGTC 3 cut(s) 706, 1102, 1206
MmeI TCCRAC 2 cut(s) 1375, 1377
MnlI CCTC 6 cut(s) 129, 224, 300, 607, 810, 1489
Mph1103I ATGCAT 1 cut(s) 1308
MroXI GAANNNNTTC 1 cut(s) 1040
MseI TTAA 5 cut(s) 522, 630, 725, 1062, 1122
MslI CAYNNNNRTG 2 cut(s) 558, 1326
MspCI CTTAAG 1 cut(s) 1061
MspI CCGG 3 cut(s) 25, 453, 998
MunI CAATTG 2 cut(s) 528, 1272
Mva1269I GAATGC 2 cut(s) 625, 1346
MvnI CGCG 3 cut(s) 656, 899, 1088
MwoI GCNNNNNNNGC 1 cut(s) 1066
NcoI CCATGG 1 cut(s) 875
NheI GCTAGC 2 cut(s) 1069, 1436
NlaIII CATG 3 cut(s) 364, 879, 1411
NlaIV GGNNCC 2 cut(s) 517, 1525
NsiI ATGCAT 1 cut(s) 1308
NspV TTCGAA 1 cut(s) 186
PaeR7I CTCGAG 1 cut(s) 604
PaqCI CACCTGC 1 cut(s) 755
PcsI WCGNNNNNNNCGW 1 cut(s) 1332
PctI GAATGC 2 cut(s) 625, 1346
PdmI GAANNNNTTC 1 cut(s) 1040
PfeI GAWTC 4 cut(s) 298, 352, 568, 945
PkrI GCNGC 5 cut(s) 47, 366, 508, 511, 955
PleI GAGTC 3 cut(s) 705, 1101, 1206
PpsI GAGTC 3 cut(s) 705, 1101, 1206
Ppu21I YACGTR 4 cut(s) 249, 869, 1031, 1336
Psp1406I AACGTT 1 cut(s) 387
PspFI CCCAGC 1 cut(s) 325
PspN4I GGNNCC 2 cut(s) 517, 1525
PspPI GGNCC 1 cut(s) 810
PsuI RGATCY 4 cut(s) 157, 577, 904, 1205
RsaI GTAC 5 cut(s) 429, 517, 798, 867, 1338
RsaNI GTAC 5 cut(s) 428, 516, 797, 866, 1337
RseI CAYNNNNRTG 2 cut(s) 558, 1326
SaqAI TTAA 5 cut(s) 522, 630, 725, 1062, 1122
SatI GCNGC 5 cut(s) 46, 365, 507, 510, 954
Sau96I GGNCC 1 cut(s) 810
SchI GAGTC 3 cut(s) 706, 1102, 1206
SduI GDGCHC 2 cut(s) 1335, 1380
SfaNI GCATC 2 cut(s) 909, 1449
Sfr274I CTCGAG 1 cut(s) 604
SfuI TTCGAA 1 cut(s) 186
SlaI CTCGAG 1 cut(s) 604
SmiMI CAYNNNNRTG 2 cut(s) 558, 1326
SmlI CTYRAG 5 cut(s) 302, 483, 581, 604, 1061
SmoI CTYRAG 5 cut(s) 302, 483, 581, 604, 1061
SnaBI TACGTA 1 cut(s) 249
SsiI CCGC 6 cut(s) 45, 48, 654, 792, 1088, 1158
SspMI CTAG 4 cut(s) 1070, 1209, 1386, 1437
StyI CCWWGG 2 cut(s) 875, 974
TaaI ACNGT 2 cut(s) 1021, 1548
TaiI ACGT 6 cut(s) 251, 390, 711, 871, 1033, 1338
TaqI TCGA 9 cut(s) 137, 154, 186, 229, 296, 574, 605, 663, 750
TatI WGTACW 1 cut(s) 427
TauI GCSGC 1 cut(s) 48
TfiI GAWTC 4 cut(s) 298, 352, 568, 945
Tru1I TTAA 5 cut(s) 522, 630, 725, 1062, 1122
Tru9I TTAA 5 cut(s) 522, 630, 725, 1062, 1122
TscAI CASTG 2 cut(s) 955, 1024
TseI GCWGC 4 cut(s) 364, 506, 509, 953
TspDTI ATGAA 9 cut(s) 426, 560, 649, 834, 1049, 1067, 1188, 1424, 1446
TspGWI ACGGA 1 cut(s) 753
TspRI CASTG 2 cut(s) 955, 1024
Vha464I CTTAAG 1 cut(s) 1061
XapI RAATTY 5 cut(s) 200, 592, 675, 840, 1499
XbaI TCTAGA 1 cut(s) 1208
XhoI CTCGAG 1 cut(s) 604
XmiI GTMKAC 1 cut(s) 1198
XmnI GAANNNNTTC 1 cut(s) 1040
XspI CTAG 4 cut(s) 1070, 1209, 1386, 1437
Zsp2I ATGCAT 1 cut(s) 1308
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.