Prupe.4G021300_v2.0.a1

Calcium-dependent protein kinase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Reverse (-)
1001928 .. 1006361
4434 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G021300.1

Sequence Viewer

Length: 1659 bp
ATGGGTTGTTGTAGCAGCAAACCAAATGCTCCAAAACCGGGTTCTAATGGGTATGGCTTAGCCACAGGTGGTGCTTTGCATCACCAACCTTATCAGCAGCCACAGCCAGCGGTTCAGCCTCTGAAAGTCTCAGCCCAACAAACCCACAACCCACCCCCACCATCCAGACCCCAACCCTTGCCACAACAACCACAGCCACAGCCAAGGCCAAAGCCACAGCCACAGCAGCCAATCCCTGTTCCAATTAAACCAGCAGCAGCACCACCAAATAGCATTCTCGGGAAGCCCTTTGATGACATTAAACAATACTACACTCTTGGCAAAGAACTGGGCAGAGGCCAATTTGGCATCACATACTTGTGCACTGAGAACTCTACTGGTCACTCTTATGCCTGCAAGTCAATTCTCAAGCGCAAACTTGTGAGCAAGAATGACAGGGATGACATCAAGAGAGAAATTCAGATTATGCAGCATTTGTCTGGACAACCAAACATTGTGGAAATCAAGGGGTCTTATGAGGACAGGTATTCTGTGCATTTAGTGATGGAGCTCTGTGCTGGCGGGGAGCTTTTCGATAGGATTATAGCACAAGGCCAATATTCGGAGAGGGCAGCAGCTGCAATTTTGCGTGACATTGTCAATGTTGTCCACATTTGTCACTTTATGGGTGTGCTTCATCGTGATCTCAAGCCTGAGAATTTCTTGTTGTCTAGCAAGGATGAAAGAGCAATGTTGAAAGCAACGGATTTCGGGTTGTCTGTTTTCATTGAGGAAGGAAAGGTGTACCGTGATATAGTAGGCAGTGCTTACTATGTTGCTCCTGAAGTGTTGCGGCGTAGTTACGGAAAGGAAATAGATATTTGGAGTGCAGGAGTTATTCTGTATATTCTACTGAGTGGTGTACCTCCATTTTGGGCTGAAACTGAGAGGGCTATATTTGATGCCATATTGGAAGGAGTAATTGACTTTGAAAGTCAACCATGGCCATCAATATCAGACAGTGCCAAGGATCTAGTTAGAAAGATGCTAACACAGGACCCAAGAAAGAGAATTACTTCTGCAGAAGTTCTAGAGCATCCCTGGCTCAGAGTAGGTGGAGTAGCATCAGACAAGCCAATAGATAGTGCAGTTCTCTCTAGAATGAAGCAATTCAGGGCAATGAACAAGCTCAAGCAACTTGCTTTGAAGGTCATAGCAGAGAATCTATCTGAAGAAGAAATTAAAGGTCTTAAAGCAATGTTCACCAATATGGACACTGACAAGAGTGGTACAATAACTTACGAAGAACTGAAGACAGGTTTAGCGCGTATTGGGTCGCGTCTGTCAGAAGCCGAAGTTAGGCAACTCATGGATGCTGCTGATGTGGATGGAAATGGATCGATTGACTACATTGAATTTATATCTGCTACTATGCACAGACAAAGATTAGAAAGAGATGAGCACCTGTACAAAGCATTTCAGTATTTTGACAAGGATAGCAGTGGGTATATTACAAGAGATGAATTAGAGGCTGCTATGAAGGAGCACGCAATGGGCGATGAAAACACCATAAGAGAAATAATTTCGGAGGTTGATGCAGATAATGACGGGAGGATAAACTATTCGGAGTTCTGTGCAATGATGAGAAGTGGAACTCAACAACCAGGAAAGCTCTTTTAA

Protein Analysis

553

Amino Acids

61.76

Weight (kDa)

6.27

Isoelectric Point (pI)

42.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 1306, 1318
AciI CCGC 3 cut(s) 110, 561, 832
AclWI GGATC 2 cut(s) 1017, 1384
AcoI YGGCCR 1 cut(s) 983
AcsI RAATTY 3 cut(s) 456, 697, 1394
AcuI CTGAAG 3 cut(s) 843, 1230, 1310
AfaI GTAC 4 cut(s) 785, 903, 1270, 1448
AfiI CCNNNNNNNGG 3 cut(s) 38, 601, 1338
AgsI TTSAA 4 cut(s) 736, 971, 1186, 1394
AjnI CCWGG 2 cut(s) 1079, 1642
AjuI GAANNNNNNNTTGG 2 cut(s) 25, 57
AluBI AGCT 5 cut(s) 550, 568, 617, 1168, 1651
AluI AGCT 5 cut(s) 550, 568, 617, 1168, 1651
Alw21I GWGCWC 4 cut(s) 365, 552, 1443, 1527
Alw26I GTCTC 1 cut(s) 133
Alw44I GTGCAC 1 cut(s) 361
AlwI GGATC 2 cut(s) 1017, 1384
AlwNI CAGNNNCTG 2 cut(s) 121, 617
Ama87I CYCGRG 1 cut(s) 278
AoxI GGCC 4 cut(s) 206, 337, 592, 983
ApaLI GTGCAC 1 cut(s) 361
ApoI RAATTY 3 cut(s) 456, 697, 1394
Asp700I GAANNNNTTC 2 cut(s) 1054, 1148
AspLEI GCGC 2 cut(s) 414, 1306
AspS9I GGNCC 1 cut(s) 1036
AsuC2I CCSGG 1 cut(s) 39
AsuHPI GGTGA 2 cut(s) 74, 1234
AvaI CYCGRG 1 cut(s) 278
AvaII GGWCC 1 cut(s) 1036
BaeGI GKGCMC 1 cut(s) 365
BalI TGGCCA 1 cut(s) 985
BanII GRGCYC 1 cut(s) 552
BbsI GAAGAC 1 cut(s) 1298
Bbv12I GWGCWC 4 cut(s) 365, 552, 1443, 1527
BccI CCATC 4 cut(s) 169, 538, 994, 1361
BciT130I CCWGG 2 cut(s) 1081, 1644
BcnI CCSGG 1 cut(s) 39
BcoDI GTCTC 1 cut(s) 133
BfaI CTAG 4 cut(s) 711, 1013, 1070, 1137
BfmI CTRYAG 1 cut(s) 1059
BglI GCCNNNNNGGC 1 cut(s) 345
BlpI GCTNAGC 1 cut(s) 58
Bme1390I CCNGG 3 cut(s) 39, 1081, 1644
Bme18I GGWCC 1 cut(s) 1036
BmeT110I CYCGRG 1 cut(s) 278
BmgT120I GGNCC 1 cut(s) 1036
BmiI GGNNCC 1 cut(s) 1038
BmrFI CCNGG 3 cut(s) 39, 1081, 1644
BmrI ACTGGG 1 cut(s) 338
BmsI GCATC 8 cut(s) 88, 357, 931, 1014, 1084, 1112, 1342, 1564
BmuI ACTGGG 1 cut(s) 338
BpiI GAAGAC 1 cut(s) 1298
Bpu1102I GCTNAGC 1 cut(s) 58
BpuEI CTTGAG 3 cut(s) 392, 671, 1154
BpuMI CCSGG 1 cut(s) 39
Bsa29I ATCGAT 1 cut(s) 1379
BsaJI CCNNGG 4 cut(s) 203, 980, 1005, 1079
Bsc4I CCNNNNNNNGG 3 cut(s) 38, 601, 1338
Bse1I ACTGG 2 cut(s) 333, 382
Bse3DI GCAATG 5 cut(s) 735, 1164, 1242, 1536, 1623
BseBI CCWGG 2 cut(s) 1081, 1644
BseCI ATCGAT 1 cut(s) 1379
BseDI CCNNGG 4 cut(s) 203, 980, 1005, 1079
BseGI GGATG 6 cut(s) 161, 445, 724, 1075, 1357, 1372
BseLI CCNNNNNNNGG 3 cut(s) 38, 601, 1338
BseMI GCAATG 5 cut(s) 735, 1164, 1242, 1536, 1623
BseMII CTCAG 6 cut(s) 144, 357, 684, 884, 915, 1099
BseNI ACTGG 2 cut(s) 333, 382
BseSI GKGCMC 1 cut(s) 365
BsgI GTGCAG 2 cut(s) 888, 1146
Bsh1236I CGCG 2 cut(s) 1306, 1318
BshFI GGCC 4 cut(s) 208, 339, 594, 985
BshVI ATCGAT 1 cut(s) 1379
BsiHKAI GWGCWC 4 cut(s) 365, 552, 1443, 1527
BsiHKCI CYCGRG 1 cut(s) 278
BsiSI CCGG 1 cut(s) 38
BslI CCNNNNNNNGG 3 cut(s) 38, 601, 1338
BsmAI GTCTC 1 cut(s) 133
BsmI GAATGC 1 cut(s) 273
BsnI GGCC 4 cut(s) 208, 339, 594, 985
BsoBI CYCGRG 1 cut(s) 278
Bsp1286I GDGCHC 4 cut(s) 365, 552, 1443, 1527
Bsp1407I TGTACA 1 cut(s) 1446
Bsp143I GATC 3 cut(s) 682, 1009, 1376
Bsp1720I GCTNAGC 1 cut(s) 58
Bsp19I CCATGG 1 cut(s) 980
BspACI CCGC 3 cut(s) 110, 561, 832
BspANI GGCC 4 cut(s) 208, 339, 594, 985
BspCNI CTCAG 6 cut(s) 143, 358, 685, 885, 916, 1098
BspDI ATCGAT 1 cut(s) 1379
BspFNI CGCG 2 cut(s) 1306, 1318
BspLI GGNNCC 1 cut(s) 1038
BspMAI CTGCAG 1 cut(s) 1063
BspPI GGATC 2 cut(s) 1017, 1384
BsrDI GCAATG 5 cut(s) 735, 1164, 1242, 1536, 1623
BsrGI TGTACA 1 cut(s) 1446
BsrI ACTGG 2 cut(s) 333, 382
BssECI CCNNGG 4 cut(s) 203, 980, 1005, 1079
BssMI GATC 3 cut(s) 682, 1009, 1376
BssT1I CCWWGG 3 cut(s) 203, 980, 1005
Bst2UI CCWGG 2 cut(s) 1081, 1644
Bst4CI ACNGT 2 cut(s) 788, 1001
BstAPI GCANNNNNTGC 1 cut(s) 617
BstAUI TGTACA 1 cut(s) 1446
BstC8I GCNNGC 4 cut(s) 108, 394, 559, 1527
BstDEI CTNAG 7 cut(s) 58, 130, 366, 693, 893, 924, 1085
BstDSI CCRYGG 1 cut(s) 980
BstF5I GGATG 6 cut(s) 161, 445, 724, 1075, 1357, 1372
BstFNI CGCG 2 cut(s) 1306, 1318
BstHHI GCGC 2 cut(s) 414, 1306
BstKTI GATC 3 cut(s) 685, 1012, 1379
BstMAI GTCTC 1 cut(s) 133
BstMBI GATC 3 cut(s) 682, 1009, 1376
BstMWI GCNNNNNNNGC 5 cut(s) 103, 226, 345, 617, 1081
BstNI CCWGG 2 cut(s) 1081, 1644
BstSCI CCNGG 3 cut(s) 37, 1079, 1642
BstSFI CTRYAG 1 cut(s) 1059
BstSLI GKGCMC 1 cut(s) 365
BstUI CGCG 2 cut(s) 1306, 1318
BstV2I GAAGAC 1 cut(s) 1298
BstX2I RGATCY 1 cut(s) 1009
BstYI RGATCY 1 cut(s) 1009
Bsu15I ATCGAT 1 cut(s) 1379
BsuRI GGCC 4 cut(s) 208, 339, 594, 985
BsuTUI ATCGAT 1 cut(s) 1379
BtgI CCRYGG 1 cut(s) 980
BtgZI GCGATG 1 cut(s) 1551
BtsCI GGATG 6 cut(s) 161, 445, 724, 1075, 1357, 1372
BtsI GCAGTG 2 cut(s) 808, 1486
BtsIMutI CAGTG 5 cut(s) 363, 808, 1006, 1254, 1486
Cac8I GCNNGC 4 cut(s) 108, 394, 559, 1527
CaiI CAGNNNCTG 2 cut(s) 121, 617
CfoI GCGC 2 cut(s) 414, 1306
Cfr13I GGNCC 1 cut(s) 1036
ClaI ATCGAT 1 cut(s) 1379
CseI GACGC 1 cut(s) 1307
Csp6I GTAC 4 cut(s) 784, 902, 1269, 1447
CspCI CAANNNNNGTGG 2 cut(s) 477, 512
CviAII CATG 2 cut(s) 981, 1348
CviQI GTAC 4 cut(s) 784, 902, 1269, 1447
DdeI CTNAG 7 cut(s) 58, 130, 366, 693, 893, 924, 1085
DpnI GATC 3 cut(s) 684, 1011, 1378
DpnII GATC 3 cut(s) 682, 1009, 1376
EaeI YGGCCR 1 cut(s) 983
Ecl136II GAGCTC 1 cut(s) 550
Eco130I CCWWGG 3 cut(s) 203, 980, 1005
Eco24I GRGCYC 1 cut(s) 552
Eco47I GGWCC 1 cut(s) 1036
Eco53kI GAGCTC 1 cut(s) 550
Eco57I CTGAAG 3 cut(s) 843, 1230, 1310
Eco88I CYCGRG 1 cut(s) 278
EcoICRI GAGCTC 1 cut(s) 550
EcoO109I RGGNCCY 1 cut(s) 1036
EcoRII CCWGG 2 cut(s) 1079, 1642
EcoT14I CCWWGG 3 cut(s) 203, 980, 1005
EcoT38I GRGCYC 1 cut(s) 552
ErhI CCWWGG 3 cut(s) 203, 980, 1005
FaeI CATG 2 cut(s) 984, 1351
FatI CATG 2 cut(s) 980, 1347
FauI CCCGC 1 cut(s) 554
FokI GGATG 6 cut(s) 148, 452, 731, 1062, 1364, 1379
FriOI GRGCYC 1 cut(s) 552
FspBI CTAG 4 cut(s) 711, 1013, 1070, 1137
GlaI GCGC 2 cut(s) 413, 1305
HaeIII GGCC 4 cut(s) 208, 339, 594, 985
HapII CCGG 1 cut(s) 38
HgaI GACGC 1 cut(s) 1307
HhaI GCGC 2 cut(s) 414, 1306
Hin1II CATG 2 cut(s) 984, 1351
Hin6I GCGC 2 cut(s) 412, 1304
HinP1I GCGC 2 cut(s) 412, 1304
HincII GTYRAC 1 cut(s) 977
HindII GTYRAC 1 cut(s) 977
HinfI GANTC 1 cut(s) 1201
HpaII CCGG 1 cut(s) 38
HphI GGTGA 2 cut(s) 74, 1234
Hpy166II GTNNAC 6 cut(s) 363, 649, 784, 902, 977, 1242
Hpy188III TCNNGA 8 cut(s) 165, 280, 448, 480, 680, 821, 1070, 1137
Hpy8I GTNNAC 6 cut(s) 363, 649, 784, 902, 977, 1242
HpyAV CCTTC 4 cut(s) 767, 947, 1180, 1513
HpyCH4III ACNGT 2 cut(s) 788, 1001
HpyF10VI GCNNNNNNNGC 5 cut(s) 103, 226, 345, 617, 1081
HpyF3I CTNAG 7 cut(s) 58, 130, 366, 693, 893, 924, 1085
Hsp92II CATG 2 cut(s) 984, 1351
HspAI GCGC 2 cut(s) 412, 1304
Kzo9I GATC 3 cut(s) 682, 1009, 1376
LmnI GCTCC 5 cut(s) 34, 547, 565, 823, 1522
LweI GCATC 8 cut(s) 88, 357, 931, 1014, 1084, 1112, 1342, 1564
MaeI CTAG 4 cut(s) 711, 1013, 1070, 1137
MaeIII GTNAC 4 cut(s) 380, 629, 656, 839
MalI GATC 3 cut(s) 684, 1011, 1378
MboI GATC 3 cut(s) 682, 1009, 1376
MboII GAAGA 4 cut(s) 1223, 1226, 1295, 1303
MflI RGATCY 1 cut(s) 1009
MhlI GDGCHC 4 cut(s) 365, 552, 1443, 1527
MlsI TGGCCA 1 cut(s) 985
MluNI TGGCCA 1 cut(s) 985
Mox20I TGGCCA 1 cut(s) 985
MroXI GAANNNNTTC 2 cut(s) 1054, 1148
MscI TGGCCA 1 cut(s) 985
MseI TTAA 5 cut(s) 246, 300, 1221, 1230, 1657
MslI CAYNNNNRTG 3 cut(s) 358, 387, 1247
Msp20I TGGCCA 1 cut(s) 985
MspA1I CMGCKG 2 cut(s) 110, 617
MspI CCGG 1 cut(s) 38
MspR9I CCNGG 3 cut(s) 39, 1081, 1644
Mva1269I GAATGC 1 cut(s) 273
MvaI CCWGG 2 cut(s) 1081, 1644
MvnI CGCG 2 cut(s) 1306, 1318
MwoI GCNNNNNNNGC 5 cut(s) 103, 226, 345, 617, 1081
NciI CCSGG 1 cut(s) 39
NcoI CCATGG 1 cut(s) 980
NdeII GATC 3 cut(s) 682, 1009, 1376
NlaIII CATG 2 cut(s) 984, 1351
NlaIV GGNNCC 1 cut(s) 1038
NmuCI GTSAC 3 cut(s) 380, 629, 656
PcsI WCGNNNNNNNCGW 1 cut(s) 1533
PctI GAATGC 1 cut(s) 273
PdmI GAANNNNTTC 2 cut(s) 1054, 1148
PfeI GAWTC 1 cut(s) 1201
PflFI GACNNNGTC 1 cut(s) 635
PpuMI RGGWCCY 1 cut(s) 1036
Psp124BI GAGCTC 1 cut(s) 552
Psp5II RGGWCCY 1 cut(s) 1036
Psp6I CCWGG 2 cut(s) 1079, 1642
PspGI CCWGG 2 cut(s) 1079, 1642
PspN4I GGNNCC 1 cut(s) 1038
PspPI GGNCC 1 cut(s) 1036
PspPPI RGGWCCY 1 cut(s) 1036
PstI CTGCAG 1 cut(s) 1063
PstNI CAGNNNCTG 2 cut(s) 121, 617
PsuI RGATCY 1 cut(s) 1009
PsyI GACNNNGTC 1 cut(s) 635
PvuII CAGCTG 1 cut(s) 617
RsaI GTAC 4 cut(s) 785, 903, 1270, 1448
RsaNI GTAC 4 cut(s) 784, 902, 1269, 1447
RseI CAYNNNNRTG 3 cut(s) 358, 387, 1247
SacI GAGCTC 1 cut(s) 552
SaqAI TTAA 5 cut(s) 246, 300, 1221, 1230, 1657
Sau3AI GATC 3 cut(s) 682, 1009, 1376
Sau96I GGNCC 1 cut(s) 1036
ScrFI CCNGG 3 cut(s) 39, 1081, 1644
SduI GDGCHC 4 cut(s) 365, 552, 1443, 1527
SfaNI GCATC 8 cut(s) 88, 357, 931, 1014, 1084, 1112, 1342, 1564
SfcI CTRYAG 1 cut(s) 1059
SinI GGWCC 1 cut(s) 1036
SmiMI CAYNNNNRTG 3 cut(s) 358, 387, 1247
SmlI CTYRAG 3 cut(s) 407, 686, 1169
SmoI CTYRAG 3 cut(s) 407, 686, 1169
SsiI CCGC 3 cut(s) 110, 561, 832
SspI AATATT 1 cut(s) 599
SspMI CTAG 4 cut(s) 711, 1013, 1070, 1137
SstI GAGCTC 1 cut(s) 552
StyD4I CCNGG 3 cut(s) 37, 1079, 1642
StyI CCWWGG 3 cut(s) 203, 980, 1005
TaaI ACNGT 2 cut(s) 788, 1001
TaqI TCGA 2 cut(s) 573, 1379
TatI WGTACW 1 cut(s) 1446
TauI GCSGC 1 cut(s) 835
TfiI GAWTC 1 cut(s) 1201
Tru1I TTAA 5 cut(s) 246, 300, 1221, 1230, 1657
Tru9I TTAA 5 cut(s) 246, 300, 1221, 1230, 1657
TscAI CASTG 5 cut(s) 370, 808, 1006, 1261, 1486
TseFI GTSAC 3 cut(s) 380, 629, 656
Tsp45I GTSAC 3 cut(s) 380, 629, 656
TspDTI ATGAA 8 cut(s) 665, 735, 754, 1157, 1175, 1515, 1532, 1554
TspGWI ACGGA 2 cut(s) 758, 858
TspRI CASTG 5 cut(s) 370, 808, 1006, 1261, 1486
Tth111I GACNNNGTC 1 cut(s) 635
VneI GTGCAC 1 cut(s) 361
VpaK11BI GGWCC 1 cut(s) 1036
XapI RAATTY 3 cut(s) 456, 697, 1394
XbaI TCTAGA 2 cut(s) 1069, 1136
XmnI GAANNNNTTC 2 cut(s) 1054, 1148
XspI CTAG 4 cut(s) 711, 1013, 1070, 1137
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.