Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0007204

Physical Location & Seq

Genomic Coordinates Reverse (-)

8528033 .. 8530437

Gene Structure 2405 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G14910.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 819 bp

ATGGAGTTGCTCTCTTCTTCACCGGCTCAGCTTCTGAGACCAAATCTCAGCTCTAGGGCTTTGCTTCCTCCACGAACATCAATCGCTTCTTCTCATCCTCCTCCTCCTCGATTCCTGGTAATGAATTCTCAATCTCAGCATCGTCCATCTATCTCCTGCGCTTCGCCTCCTCCCGGAGATAACGGTTTTCCGGCGATTACCACGGCTTCACCCATCGAATCAGCTCGAATAGGTGAAGTGAAGAGAGAAACAAAGGAAACAAATGTATCAGTGAAGATTAATTTGGATGGTCATGGAGTTTCAGATAGCTCCACTGGAATCCCTTTCCTTGATCATATGTTAGATCAACTTGCTTCACATGGCTTGTTCGATGTACACGTAAGAGCTACTGGTGATACTCACATTGATGATCATCATACTAATGAAGATGTTGCTCTTGCCATTGGAACTGCTTTGTTAAAGGCACTTGGGGAACGGAAAGGGATTAATCGTTTTGGCGATTTTACAGCTCCTCTTGATGAAGCACTCATACATGTTTCCCTGGATCTATCTGGTAGACCATATCTTGGATACAACTTAGAGATTCCAACGCAGAGAGTAGGAACATACGACACTCAGTTGGTGGAACACTTCTTCCAGTCATTGGTGAATACTTCTGGTATGACTCTTCACATCCGACAGCTTGCTGGTAAAAACTCGCATCACATAATAGAAGCGACCTTTAAGGCCTTTGCAAGAGCTCTCCGACAAGCAACAGAGTCTGATCCACGCCGCGGTGGGACAATACCAAGCTCGAAAGGAGTCTTGTCACGTTCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000105 GO:0003674 GO:0003824 GO:0004424 GO:0006082 GO:0006520 GO:0006547 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009987 GO:0016053 GO:0016829 GO:0016835 GO:0016836 GO:0018130 GO:0019438 GO:0019752 GO:0034641 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0046394 GO:0046483 GO:0052803 GO:0071704 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607

KEGG Pathways

Metabolic & Signaling

ko00340 ko01100 ko01110 ko01230 map00340 map01100 map01110 map01230

Pfam Domains

Protein Families

IGPD

Protein Analysis

272

Amino Acids

29.42

Weight (kDa)

6.93

Isoelectric Point (pI)

48.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IGPD	PF00475	105 - 248	8.4e-65	Imidazoleglycerol-phosphate dehydratase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007204)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G22425 AT3G22425 AT4G14910 AT4G14910 AT4G14910
fragaria_vesca	FvH4_4g15510
malus_domestica	MD13G1192800.v1.1 MD16G1193500.v1.1
prunus_persica	Prupe.1G013300_v2.0.a1 Prupe.1G013300_v2.0.a1 Prupe.1G013300_v2.0.a1
pyrus_communis	pycom13g16510 pycom16g16320
rosa_chinensis	RchiOBHm_Chr4g0416251
rosa_laevigata	RLG00000008002
rosa_multiflora	Rmu_sc0001145.1_g000009 Rmu_sc0029602.1_g000001 Rmu_sc0029603.1_g000001
rosa_roxburghii	Rroxscaffold_5G00360100
rosa_rugosa	Rorug04G0140300
rosa_samantha	Rh4AG202300 Rh4BG199700 Rh4CG213600 Rh4DG199400
rosa_wichuraiana	Rw4G017110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	566, 643
AccI	GTMKAC	1 cut(s)	556
AccII	CGCG	1 cut(s)	774
AciI	CCGC	2 cut(s)	772, 774
AclWI	GGATC	2 cut(s)	552, 758
AcsI	RAATTY	1 cut(s)	124
AfaI	GTAC	1 cut(s)	375
AfiI	CCNNNNNNNGG	4 cut(s)	173, 566, 643, 773
AflIII	ACRYGT	2 cut(s)	376, 532
AjnI	CCWGG	2 cut(s)	114, 540
AjuI	GAANNNNNNNTTGG	2 cut(s)	266, 298
AloI	GAACNNNNNNTCC	2 cut(s)	618, 650
AluBI	AGCT	9 cut(s)	31, 51, 224, 309, 386, 509, 682, 740, 792
AluI	AGCT	9 cut(s)	31, 51, 224, 309, 386, 509, 682, 740, 792
Alw21I	GWGCWC	1 cut(s)	742
Alw26I	GTCTC	1 cut(s)	31
AlwI	GGATC	2 cut(s)	552, 758
AlwNI	CAGNNNCTG	2 cut(s)	34, 761
AoxI	GGCC	1 cut(s)	726
ApoI	RAATTY	1 cut(s)	124
AseI	ATTAAT	2 cut(s)	279, 486
AspLEI	GCGC	1 cut(s)	161
AsuC2I	CCSGG	1 cut(s)	174
AsuHPI	GGTGA	5 cut(s)	12, 201, 245, 404, 658
BaeI	ACNNNNGTAYC	2 cut(s)	249, 282
BanII	GRGCYC	1 cut(s)	742
BarI	GAAGNNNNNNTAC	2 cut(s)	513, 545
Bbv12I	GWGCWC	1 cut(s)	742
BccI	CCATC	3 cut(s)	154, 221, 281
BceAI	ACGGC	1 cut(s)	219
BciT130I	CCWGG	2 cut(s)	116, 542
BciVI	GTATCC	1 cut(s)	563
BclI	TGATCA	2 cut(s)	331, 409
BcnI	CCSGG	1 cut(s)	174
BcoDI	GTCTC	1 cut(s)	31
BfaI	CTAG	1 cut(s)	54
BfuI	GTATCC	1 cut(s)	563
BisI	GCNGC	1 cut(s)	772
BlpI	GCTNAGC	1 cut(s)	27
BlsI	GCNGC	1 cut(s)	773
Bme1390I	CCNGG	3 cut(s)	116, 174, 542
BmrFI	CCNGG	3 cut(s)	116, 174, 542
BmsI	GCATC	2 cut(s)	148, 709
BplI	GAGNNNNNCTC	1 cut(s)	28
Bpu1102I	GCTNAGC	1 cut(s)	27
BpuMI	CCSGG	1 cut(s)	174
BsaAI	YACGTR	1 cut(s)	379
BsaBI	GATNNNNATC	1 cut(s)	411
BsaI	GGTCTC	1 cut(s)	31
BsaJI	CCNNGG	3 cut(s)	201, 540, 772
Bsc4I	CCNNNNNNNGG	4 cut(s)	173, 566, 643, 773
Bse118I	RCCGGY	1 cut(s)	22
Bse1I	ACTGG	3 cut(s)	319, 394, 637
Bse8I	GATNNNNATC	1 cut(s)	411
BseBI	CCWGG	2 cut(s)	116, 542
BseDI	CCNNGG	3 cut(s)	201, 540, 772
BseGI	GGATG	3 cut(s)	94, 292, 672
BseJI	GATNNNNATC	1 cut(s)	411
BseLI	CCNNNNNNNGG	4 cut(s)	173, 566, 643, 773
BseMII	CTCAG	5 cut(s)	26, 41, 61, 149, 629
BseNI	ACTGG	3 cut(s)	319, 394, 637
BseRI	GAGGAG	5 cut(s)	90, 93, 96, 159, 501
Bsh1236I	CGCG	1 cut(s)	774
BshFI	GGCC	1 cut(s)	728
BsiHKAI	GWGCWC	1 cut(s)	742
BsiSI	CCGG	3 cut(s)	23, 174, 191
BslFI	GGGAC	1 cut(s)	793
BslI	CCNNNNNNNGG	4 cut(s)	173, 566, 643, 773
BsmAI	GTCTC	1 cut(s)	31
BsmFI	GGGAC	1 cut(s)	793
BsnI	GGCC	1 cut(s)	728
Bso31I	GGTCTC	1 cut(s)	31
Bsp1286I	GDGCHC	1 cut(s)	742
Bsp1407I	TGTACA	1 cut(s)	373
Bsp143I	GATC	5 cut(s)	331, 343, 409, 544, 763
Bsp1720I	GCTNAGC	1 cut(s)	27
BspACI	CCGC	2 cut(s)	772, 774
BspANI	GGCC	1 cut(s)	728
BspCNI	CTCAG	5 cut(s)	27, 40, 60, 148, 628
BspFNI	CGCG	1 cut(s)	774
BspPI	GGATC	2 cut(s)	552, 758
BspTNI	GGTCTC	1 cut(s)	31
BsrFI	RCCGGY	1 cut(s)	22
BsrGI	TGTACA	1 cut(s)	373
BsrI	ACTGG	3 cut(s)	319, 394, 637
BssAI	RCCGGY	1 cut(s)	22
BssECI	CCNNGG	3 cut(s)	201, 540, 772
BssMI	GATC	5 cut(s)	331, 343, 409, 544, 763
Bst2UI	CCWGG	2 cut(s)	116, 542
Bst4CI	ACNGT	1 cut(s)	185
Bst6I	CTCTTC	3 cut(s)	19, 236, 672
BstAUI	TGTACA	1 cut(s)	373
BstBAI	YACGTR	1 cut(s)	379
BstC8I	GCNNGC	1 cut(s)	684
BstDEI	CTNAG	6 cut(s)	27, 35, 47, 135, 577, 615
BstDSI	CCRYGG	2 cut(s)	201, 772
BstF5I	GGATG	3 cut(s)	94, 292, 672
BstFNI	CGCG	1 cut(s)	774
BstHHI	GCGC	1 cut(s)	161
BstKTI	GATC	5 cut(s)	334, 346, 412, 547, 766
BstMAI	GTCTC	1 cut(s)	31
BstMBI	GATC	5 cut(s)	331, 343, 409, 544, 763
BstNI	CCWGG	2 cut(s)	116, 542
BstNSI	RCATGY	1 cut(s)	536
BstSCI	CCNGG	3 cut(s)	114, 172, 540
BstUI	CGCG	1 cut(s)	774
BstX2I	RGATCY	1 cut(s)	544
BstYI	RGATCY	1 cut(s)	544
BsuI	GTATCC	1 cut(s)	563
BsuRI	GGCC	1 cut(s)	728
BtgI	CCRYGG	2 cut(s)	201, 772
BtsCI	GGATG	3 cut(s)	94, 292, 672
BtsIMutI	CAGTG	2 cut(s)	276, 312
Cac8I	GCNNGC	1 cut(s)	684
CaiI	CAGNNNCTG	2 cut(s)	34, 761
CfoI	GCGC	1 cut(s)	161
Cfr10I	RCCGGY	1 cut(s)	22
Cfr42I	CCGCGG	1 cut(s)	775
Csp6I	GTAC	1 cut(s)	374
CviAII	CATG	3 cut(s)	293, 359, 533
CviQI	GTAC	1 cut(s)	374
DdeI	CTNAG	6 cut(s)	27, 35, 47, 135, 577, 615
DpnI	GATC	5 cut(s)	333, 345, 411, 546, 765
DpnII	GATC	5 cut(s)	331, 343, 409, 544, 763
Eam1104I	CTCTTC	3 cut(s)	19, 236, 672
EarI	CTCTTC	3 cut(s)	19, 236, 672
Ecl136II	GAGCTC	1 cut(s)	740
Eco147I	AGGCCT	1 cut(s)	728
Eco24I	GRGCYC	1 cut(s)	742
Eco31I	GGTCTC	1 cut(s)	31
Eco53kI	GAGCTC	1 cut(s)	740
EcoICRI	GAGCTC	1 cut(s)	740
EcoRI	GAATTC	1 cut(s)	124
EcoRII	CCWGG	2 cut(s)	114, 540
EcoT38I	GRGCYC	1 cut(s)	742
FaeI	CATG	3 cut(s)	296, 362, 536
FaqI	GGGAC	1 cut(s)	793
FatI	CATG	3 cut(s)	292, 358, 532
FauNDI	CATATG	1 cut(s)	336
FbaI	TGATCA	2 cut(s)	331, 409
FblI	GTMKAC	1 cut(s)	556
Fnu4HI	GCNGC	1 cut(s)	772
FokI	GGATG	3 cut(s)	81, 299, 659
FriOI	GRGCYC	1 cut(s)	742
Fsp4HI	GCNGC	1 cut(s)	772
FspBI	CTAG	1 cut(s)	54
GlaI	GCGC	1 cut(s)	160
GluI	GCNGC	1 cut(s)	772
HaeIII	GGCC	1 cut(s)	728
HapII	CCGG	3 cut(s)	23, 174, 191
HhaI	GCGC	1 cut(s)	161
Hin1II	CATG	3 cut(s)	296, 362, 536
Hin6I	GCGC	1 cut(s)	159
HinP1I	GCGC	1 cut(s)	159
HinfI	GANTC	7 cut(s)	111, 218, 318, 583, 664, 758, 801
HpaII	CCGG	3 cut(s)	23, 174, 191
HphI	GGTGA	5 cut(s)	12, 201, 245, 404, 658
Hpy166II	GTNNAC	2 cut(s)	376, 557
Hpy188I	TCNGA	5 cut(s)	36, 304, 677, 746, 763
Hpy188III	TCNNGA	1 cut(s)	515
Hpy8I	GTNNAC	2 cut(s)	376, 557
HpyCH4III	ACNGT	1 cut(s)	185
HpyCH4IV	ACGT	2 cut(s)	378, 811
HpyCH4V	TGCA	1 cut(s)	734
HpyF3I	CTNAG	6 cut(s)	27, 35, 47, 135, 577, 615
HpySE526I	ACGT	2 cut(s)	378, 811
Hsp92II	CATG	3 cut(s)	296, 362, 536
HspAI	GCGC	1 cut(s)	159
Ksp22I	TGATCA	2 cut(s)	331, 409
KspI	CCGCGG	1 cut(s)	775
Kzo9I	GATC	5 cut(s)	331, 343, 409, 544, 763
LmnI	GCTCC	2 cut(s)	314, 514
LweI	GCATC	2 cut(s)	148, 709
MaeI	CTAG	1 cut(s)	54
MaeII	ACGT	2 cut(s)	378, 811
MaeIII	GTNAC	1 cut(s)	807
MalI	GATC	5 cut(s)	333, 345, 411, 546, 765
MboI	GATC	5 cut(s)	331, 343, 409, 544, 763
MboII	GAAGA	8 cut(s)	6, 9, 81, 253, 286, 437, 625, 659
MflI	RGATCY	1 cut(s)	544
MhlI	GDGCHC	1 cut(s)	742
MluCI	AATT	2 cut(s)	124, 280
MlyI	GAGTC	3 cut(s)	658, 767, 810
MmeI	TCCRAC	3 cut(s)	611, 700, 769
MnlI	CCTC	8 cut(s)	78, 108, 111, 114, 117, 177, 180, 522
MseI	TTAA	4 cut(s)	279, 458, 486, 723
MslI	CAYNNNNRTG	2 cut(s)	405, 420
MspA1I	CMGCKG	1 cut(s)	774
MspI	CCGG	3 cut(s)	23, 174, 191
MspR9I	CCNGG	3 cut(s)	116, 174, 542
MvaI	CCWGG	2 cut(s)	116, 542
MvnI	CGCG	1 cut(s)	774
NciI	CCSGG	1 cut(s)	174
NdeI	CATATG	1 cut(s)	336
NdeII	GATC	5 cut(s)	331, 343, 409, 544, 763
NlaIII	CATG	3 cut(s)	296, 362, 536
NmuCI	GTSAC	1 cut(s)	807
NspI	RCATGY	1 cut(s)	536
PceI	AGGCCT	1 cut(s)	728
PciI	ACATGT	1 cut(s)	532
PcsI	WCGNNNNNNNCGW	1 cut(s)	375
PfeI	GAWTC	4 cut(s)	111, 218, 318, 583
PflMI	CCANNNNNTGG	2 cut(s)	566, 643
PfoI	TCCNGGA	1 cut(s)	172
PkrI	GCNGC	1 cut(s)	773
PleI	GAGTC	3 cut(s)	658, 766, 809
PpsI	GAGTC	3 cut(s)	658, 766, 809
Ppu21I	YACGTR	1 cut(s)	379
PscI	ACATGT	1 cut(s)	532
PshBI	ATTAAT	2 cut(s)	279, 486
Psp124BI	GAGCTC	1 cut(s)	742
Psp6I	CCWGG	2 cut(s)	114, 540
PspGI	CCWGG	2 cut(s)	114, 540
PstNI	CAGNNNCTG	2 cut(s)	34, 761
PsuI	RGATCY	1 cut(s)	544
RsaI	GTAC	1 cut(s)	375
RsaNI	GTAC	1 cut(s)	374
RseI	CAYNNNNRTG	2 cut(s)	405, 420
SacI	GAGCTC	1 cut(s)	742
SacII	CCGCGG	1 cut(s)	775
SaqAI	TTAA	4 cut(s)	279, 458, 486, 723
SatI	GCNGC	1 cut(s)	772
Sau3AI	GATC	5 cut(s)	331, 343, 409, 544, 763
SchI	GAGTC	3 cut(s)	658, 767, 810
ScrFI	CCNGG	3 cut(s)	116, 174, 542
SduI	GDGCHC	1 cut(s)	742
SfaNI	GCATC	2 cut(s)	148, 709
Sfr303I	CCGCGG	1 cut(s)	775
SgrBI	CCGCGG	1 cut(s)	775
SmiMI	CAYNNNNRTG	2 cut(s)	405, 420
Sse9I	AATT	2 cut(s)	124, 280
SseBI	AGGCCT	1 cut(s)	728
SsiI	CCGC	2 cut(s)	772, 774
SspMI	CTAG	1 cut(s)	54
SstI	GAGCTC	1 cut(s)	742
StuI	AGGCCT	1 cut(s)	728
StyD4I	CCNGG	3 cut(s)	114, 172, 540
TaaI	ACNGT	1 cut(s)	185
TaiI	ACGT	2 cut(s)	381, 814
TaqI	TCGA	5 cut(s)	109, 216, 226, 369, 794
TasI	AATT	2 cut(s)	124, 280
TatI	WGTACW	1 cut(s)	373
TauI	GCSGC	1 cut(s)	774
TfiI	GAWTC	4 cut(s)	111, 218, 318, 583
Tru1I	TTAA	4 cut(s)	279, 458, 486, 723
Tru9I	TTAA	4 cut(s)	279, 458, 486, 723
TscAI	CASTG	2 cut(s)	276, 319
TseFI	GTSAC	1 cut(s)	807
Tsp45I	GTSAC	1 cut(s)	807
TspDTI	ATGAA	4 cut(s)	137, 438, 534, 804
TspGWI	ACGGA	1 cut(s)	490
TspRI	CASTG	2 cut(s)	276, 319
Van91I	CCANNNNNTGG	2 cut(s)	566, 643
VspI	ATTAAT	2 cut(s)	279, 486
XapI	RAATTY	1 cut(s)	124
XceI	RCATGY	1 cut(s)	536
XmiI	GTMKAC	1 cut(s)	556
XspI	CTAG	1 cut(s)	54

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.