AT4G17330

Tudor-like domain present in plant sequences.

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0002656
Physical Location & Seq
Reverse (-)
9688851 .. 9697706
8856 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G17330.2

Sequence Viewer

Length: 6114 bp
ATGGATTATGATGACAGTGACTTTCAAAACCAGAATCTCCATTTAGCTGGTGAAGCCAACAACAAATTTCCACCAGTTTTACAGCCTTATGCTCTTCCAAAGTTTGATTTTGATGATACACTCAACACGCATCTGAGGTTTGATAGTTTAGGTGAATCTGAAGCTTTTCTTGGTATTGAGGGTAACGAAGATAATAACTGGATTGAGGATTTCTCTCGTGGAAGTAGTGGTATAGTGTTTAGTTCAGGTGCAACGGAGTCCTGTGCCATTTCTAGGCACAATAATGTTTGGTCTGAGGCTACTTCGTCGGAATCTGTTGCAATGCTTTTGAATTCAGTTGGACAGGACGAAGTTATTGTAAGAGAGGATACTATCAAGAAATCTGACACTTCTCATGAACTAGGCTGCACAATGGAAACAGTAGAGCCTGGTCAGACATCCCATGAAAGAAGTCTTTCCAAAGAGGAAACGGTGAACTTACAACCCAACCCCTCTGTGGATGATACTCCAGGAGAGTCCTCTGTGGTAAAGACAGATGATGGACAGGAGCAGGTTCTGGTTAAAGATGACTCACCAACGGCTGTAGAAGAGGCATCTGTGGAGGAAAAGAATTCCATCTTGACTTCTAATACCGCGACGGTAGAGGCTATAGATACTACTGATCTTGGTAAAATAGGAACTGAGACGACGGATAATCTTCTTGACCAAACAGAAGAGAAAGCCAATGTAGAATCAAGGATGGAAGATGATTGTAGCGATGGGAATGTACAGACTATTATTACTTGTAGCGGTGAGTTGAATAATCAGAGCACTTTACTTCCAGAGACTTCCAATGATGAAAATGTTATCAGCGACCACATTCAAAGTAGTTATAACCGCAATGATCTAACTGCAGATGCACGGTCAATTTTGGTTGAAGGTCATTCTGATAGCCATATAGACTCAGCTTCCGAAGTTGAAAAAGTGGAAGCTGAAAATATTGGCAAAACTGCAAAGCCTGATTTGAAGGAGATAGAGCTATCTGATGTCACAGTACTAGAAAGAGGGGACCAAGCTCCCTCTACTCTTGAGGTAGGTGGACAAGATGTTTCTGGGACCGAATGCCAAGATCTCCTTGTCAGCACTGTTCATACTAGCGTAGCTGTTGAAGCGTCTTTGGAACTTGCTGGGGAATTGACAACTATAACAAACAGTGTTTCCATTGAGAAGCCCGAGTTGCTTAGTCATCAACATATGGAAGTTATTACAAGTGAACATGAGTCTACTTTTCAGATAGAGACTGAGACATATCCGCAGATACACGTATTTGAAACTTCAGAGAGTGTTTATATTTCAACGATGGACTCAATGGTTGAAGCTAGAGAAGGTGGTGTGTCTAAGAAGAGTGACAATGAAGGTAGTGCTCGCACTTCTAATCTCGAGCAAAGCATGGAACTGCCTGTCAATGCCAATGATAGAGATCAAGATGTCAAGAACTCTCAGATCCTATCTGAAAGCGTTGTGTCTGGTTCTGTTGGCTATGTTTCAGGAGGCTCTACTTCAGAGTTGGCGGAGTCAGAATCTCAATCTGACAGCATTCCAACAGACAAGTCAGAGACTATGATTGACAGTTCTCTCAATCTCGAAGAATTACAACCTCTAAGTCAAGATGGAGCACCTGCTGTCAGTCTCACATCTTCAATAGATTTACATATGGTAAAGACATCCTCTGATGACAGTGACCAAGGCAGTTACTCTGAAACCAAGAAGGTTTATGGTGAACCTGAAAATGGTCAAACCGTTCCACCTGTGGATGCAAGTTGTTCAGGGAGTCAGATGGACCAAGAAGCTAGGAAGCGTGCTGAAGGTACTAAGCAAAGTACATACTCTGTTGAAGGCTGTCCTCGCTCTGAAGGGTCAAAGGATGCAGTAGATGCTGATGGTGTTGGACAAGTTTTGCAGCAGCAGTCTGAGGAATTAATTTTTGAAGAGAATGTAGTAACAGAAGCTGTAAAAGCTCCTGAGACTCTGTCAGTTCTGGACAAGGATAACAAAAATGAAATGCCTATTACTAGCTCCTTGCCTATTCTTGGGAGTGAAGCTGGAAAAGATGGCCAGGAAGAGGATAATACTGCTGCTTCTGGTGGGATTATGGCAGCTGGGACTCCTGTTACACACCCCAAAGGTGATGCAATCGTACTAGGAGACTCCCGTGCTTCTACATGTTCTGAGTCTTCTGTAAAGTCTTATGTAACTGCAATAGAAGATGCTGCTACTAATTTAAAGACTCCTCTTGATTCTTTCCCCACTGTTAAGACTTCCGAACTTCAATTTAATAACACAGAGACAAACAGTGTCAAAAAGCCAGAAGATCAGAATATTTCGGGTTTTATGTCTGCTGGATCTCCGGTCTTGAATAGAAATGAGACCTCCAGCAGTGAAATGAACTTAACTCCTGATCAGCTGAAAGCAGGGAAAATTTCCAAAGCTGTTATATTTTCACAAGCTACCCTTGTCTCCCCGATTGTGGTGGGATCTCCTTCAACATCTAGCTTAGATAAAACAGCTGCAAAGTCTTCCAAAGCAAAATCTGAGCGGAAACCCAGGCGAACATCTAAATCTGTAGGAAAAGAGACTTCTAGAAAAGGAACTAGTGTAAAAGGGGCTACACCTATTGAACAGTTTCAAAGTGGAGGCAAAACAAATGCTGTTAATCAAAGTTTGGCTTCTCATATTCAGATCACACAATCTACTGAGAAACAGCGAAGTCTTCAGAGCCCTGCTCTAAAAGCTTTTGGGTCCCTTTCAACCCCTACGGCAAGTCTACCGGATTTGAACTCTTCTGCTCTCTCAAGTATTCTGCGTCGACCTTTCACGGACTTGCAACAAGTGCAACTACGTGCACAGATTTTTGTATACGGGGCTCTGATCCAAGGAACAGCACCGGATGAAGCTTATATGATATCTGCATTTGGTGGTGCAGATGGTGGGAAGGGCAGCTGGGAGAAATCATGGCGTACTTGTGTTGTAAGGGCTCAGAAATCGCTTGTTGCTACTCCTGAAACGCCACTGCAATCACGTCCAGGGAAGACAGAGACCCCTTCAGCAGGTCACACCAATAGCAAAGAGAGTTCAGGGACAAACCCCATGATTCCACTCTCATCACCTTTATGGAGTTTATCAACTTCCGTAGATACTTTACAATCAAGTAGCGTTCAGAGAGGTTCAGCTGCTACTCACCAGCCATTGCTTTCTGCATCGCATGCTCACCAAACTCCACCAACTCAGAATATTGTTGGACATAATACCCCTTGGATGTCGCCTCTCCCTTTCCGTAACGCTTGGCTTGCTTCTCAGCAAACCAGTGGATTTGATGTTGGTTCCCGTTTCCCCGTCTATCCAATCACTGACCCTGTAAAATTGACTCCCATGAAAGAATCATCCATGACTCTTTCTGGCGCAAAACATGTTCAGAGTGGAACTTCTAGCAATGTTTCCAAAGTGACACCAACACTTGAGCCTACTAGTACAGTTGTAGCACCTGCTCAACATTCTACAAGGGTAAAATCAAGGAAACGGAAGAAGATGCCAGTCTCTGTGGAGTCTGGTCCAAACATTTTGAATTCGTTAAAGCAGACAGAATTAGCTGCCTCACCTCTTGTGCCTTTTACACCTACTCCGGCTAATCTGGGTTATAATGCTGGCACCCTGCCCAGTGTTGTTTCTATGACTGCAGTCCCTATGGACCTGGTATCTACGTTCCCCGGGAAGAAAATAAAATCATCTTTCCCATCTCCAATTTTTGGTGGTAACCTTGTACGTGAAGTAAAGCAGAGATCTGTCTTGTCAGAGGATACTATTGAAAAACTTAAGGAGGCTAAGATGCATGCAGAGGATGCATCTGCTCTTGCTACTGCAGCTGTTAGTCATAGCGAATATGTATGGAAGCAGATAGAGCAACAAAGTCATGCTGGCCTCCAGCCAGAAACTCAAGACAGATTAGCTTCGGCTGCTGTTGCCATAGCTGCTGCAGCTGCGGTGGCAAAAGCTGCAGCTGCTGCCGCCAATGTTGCAGCTAATGCTGCATTGCAGGCCAAGTTAATGGCTGAAGAAGCATCCCTTCCAAATGCTTCTGATCAGGGACTCCCAAAGTCATATGATAGCATATTACCCGGTCAGGGTACCCCTGCTTCTATCTTGAAGGGTGAAGGTGCAGTGGTGAACTCCAGTTCGGTTCTTATTGCTGCGAGAGAGGCATCTAAGAAGAGGGTTGAAGCTGCTACAGCGGCCACCAAGCGTGCTGAAAATATGGACTCCATTGTAAAAGCAGCAGAATTGGCATCAGAGGCTGTTTCTCAAGCTGGAATACTTGTTTCAATGGGTCATCCTCCGTTGCTCAATAAGCTGGTGGAGGCGGGTCCAAGTAATTACTGGAGGCAGGCTCAAGAATCTCAGGAAGTACAGCCCTGTAAAACGGTTGTCTTAGAAAAAGAAACTGTGTCTACTAGTGAGGGAACTTTTGCTGGTCCCAAAATTGTGCAGACTGAGTTTGGTGGCTCTGTGAATACGGCAGATGGTGTGTCCGGTCCAGTTCCTGCCACTGGAAAGTTAAAGGGACAGGAGGGTGATAAATATGCAGACTTGGCTAAAAACAATGATGTGGTTTTTGAACCAGAAGTTGGGTCAAAATTTTCAATTGACGCCCAACAGACTATCAAAGCAACAAAGAATGAGGACATCAAGGAGGGTTCTAATGTAGAGGTTTTCAAAGAAGAACCTGGATTAAGAACCGCATGGTACTCTGCCAATGTATTGAGCTTAGAGGATGATAAAGCTTACGTGTTGTTCAGTGACCTATCTGTAGAACAAGGAACAGACAAGCTTAAGGAGTGGGTAGCCCTCAAAGGGGAAGGTGATCAGGCCCCTAAAATAAGACCTGCTCGTTCTGTTACTGCCTTGCCATATGAAGGAACCAGGAAGAGACGTAGAGCTGCTCTTGGGGATCATATTTGGAAAATTGGGGATAGGGTAGACTCGTGGGTGCATGACAGTTGGTTGGAGGGTGTTATCACAGAGAAGAACAAGAAAGATGAAAACACAGTGACTGTGCATTTTCCTGCGGAAGAAGAAACTTTGACGATCAAAGCTTGGAATCTTCGTCCTTCTCTTGTGTGGAAAGATGGAAAGTGGATTGAATGTTCTAGTTCAGGAGAAACTATCAGCTCGTCACATGAGGGTGATACTCCAAAGGAGAAGCGTCCTAGATTAGGAACTCCCGCTCTTGTGGCTGAAGTAAAAGACACGAGTATGAAGATTGTTGATGATCCAGACTTGGGGAAACCGCCTCAGACTGGTGTTCTTAACCTCGGTGTTTCAGAGAATACTTTTAACATTGGAAAGAGTACCAGAGAGGAGAACAAACCCGATCCACTCCGAATGAAGAGAACCGGTTTGCAAAAGCAAGGATCAAAAGTGATTTTTGGTGTCCCTAAACCTGGAAAGAAAAGGAAGTTCATGGACGTGAGCAAACACTATGTTTCAGAGGCAAGCACTAAAACTCAGGAAAGGAAGGAACCAGTTAAGCCTGTGAGATCAATTGTGCCCCAAAATTCTGGAATAGGTAGCTGGAAAATGCCTTCTAAAACTATCTCCATAGAGAAACAGACAACAATATCTAGGCCCAAGACTTTCAAACCTGCGCCCAAGCCCAAAGAGAAACCGGGTGCTACGGCTAGGATAATTCCCCGCAAGGACTCGCGTAATACAACAGCATCAGATATGGAATCTGATGAGAGTGCAGAAAACAGGGGTCCTGGATCTGGTGTTTCATTTAAGGGAACAGTAGAAGAGCAAACCACATCATCCTCTCATGATACTGGTTCGAAGAATAGTTCCTCCTTGAGCACTAATAAAGGGAGAGTGGCTCCTACTGCAGGAAGGTTAGCCAAAATCGAAGAGGACAAGGCGTTGGCTGAAAATTCTTCAAAAACATCAGAGGGAATGGAGCCACGTAGATCTATCCGCAGGATCCAGCCAACTTCTAGACTACTCGAAGGTCTGCAAACGTCGATGATGACCTCGAAGATTCCTTCGGTATCACACAGCAAAAGTCACCTAAGTCAAAGCAAAAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Agenet

Protein Analysis

2037

Amino Acids

218.07

Weight (kDa)

5.17

Isoelectric Point (pI)

51.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Agenet PF05641 1576 - 1640 1.4e-11 Agenet domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 873, 3675
AarI CACCTGC 2 cut(s) 1666, 3529
Acc36I ACCTGC 6 cut(s) 541, 1666, 3077, 3529, 4924, 5683
Acc65I GGTACC 1 cut(s) 4160
AccB1I GGYRCC 2 cut(s) 3683, 4160
AccB7I CCANNNNNTGG 2 cut(s) 3782, 4658
AccBSI CCGCTC 2 cut(s) 2575, 5258
AccI GTMKAC 6 cut(s) 1262, 2803, 2845, 2895, 4481, 5010
AccII CGCG 2 cut(s) 635, 5737
AcoI YGGCCR 2 cut(s) 2092, 4266
AcsI RAATTY 8 cut(s) 65, 331, 610, 2457, 3601, 4667, 5587, 5956
AcuI CTGAAG 9 cut(s) 180, 1299, 1524, 1863, 1911, 2735, 3066, 4107, 5289
AcyI GRCGYC 1 cut(s) 4680
AflII CTTAAG 2 cut(s) 3848, 4862
AflIII ACRYGT 4 cut(s) 1300, 2201, 3445, 4818
AgeI ACCGGT 1 cut(s) 5426
AhlI ACTAGT 3 cut(s) 2630, 3503, 4484
AjiI CACGTC 2 cut(s) 3059, 5500
AjuI GAANNNNNNNTTGG 4 cut(s) 153, 185, 4641, 4673
AloI GAACNNNNNNTCC 2 cut(s) 5161, 5193
Alw21I GWGCWC 5 cut(s) 812, 1405, 1657, 2884, 5885
Alw44I GTGCAC 1 cut(s) 2880
AlwNI CAGNNNCTG 7 cut(s) 556, 1988, 3575, 4037, 4328, 4574, 5084
Ama87I CYCGRG 3 cut(s) 1211, 1418, 3743
AoxI GGCC 6 cut(s) 2092, 3952, 4071, 4266, 4899, 5657
ApaLI GTGCAC 1 cut(s) 2880
ApoI RAATTY 8 cut(s) 65, 331, 610, 2457, 3601, 4667, 5587, 5956
AseI ATTAAT 1 cut(s) 1958
AsiGI ACCGGT 1 cut(s) 5426
Asp700I GAANNNNTTC 3 cut(s) 165, 454, 2661
Asp718I GGTACC 1 cut(s) 4160
AspLEI GCGC 2 cut(s) 3440, 5680
AsuC2I CCSGG 4 cut(s) 3744, 3745, 4152, 5700
AsuII TTCGAA 1 cut(s) 5861
AvaI CYCGRG 3 cut(s) 1211, 1418, 3743
BaeGI GKGCMC 2 cut(s) 2884, 5583
BalI TGGCCA 1 cut(s) 2094
BamHI GGATCC 1 cut(s) 6006
BanI GGYRCC 2 cut(s) 3683, 4160
BanII GRGCYC 3 cut(s) 2759, 2905, 3016
BarI GAAGNNNNNNTAC 2 cut(s) 4153, 4185
BauI CACGAG 3 cut(s) 216, 5014, 5281
BbsI GAAGAC 4 cut(s) 2205, 2547, 2741, 3074
Bbv12I GWGCWC 5 cut(s) 812, 1405, 1657, 2884, 5885
BceAI ACGGC 4 cut(s) 594, 2811, 4563, 5724
BciVI GTATCC 2 cut(s) 361, 3826
BclI TGATCA 3 cut(s) 2437, 4114, 4894
BcnI CCSGG 4 cut(s) 3744, 3745, 4152, 5700
BcuI ACTAGT 3 cut(s) 2630, 3503, 4484
BfrI CTTAAG 2 cut(s) 3848, 4862
BfuAI ACCTGC 6 cut(s) 541, 1666, 3077, 3529, 4924, 5683
BfuI GTATCC 2 cut(s) 361, 3826
BglII AGATCT 3 cut(s) 1108, 3815, 5993
BmcAI AGTACT 1 cut(s) 1035
BmeT110I CYCGRG 3 cut(s) 1211, 1418, 3743
BmgBI CACGTC 2 cut(s) 3059, 5500
BmrI ACTGGG 1 cut(s) 3687
BmuI ACTGGG 1 cut(s) 3687
BoxI GACNNNNGTC 1 cut(s) 3713
BpiI GAAGAC 4 cut(s) 2205, 2547, 2741, 3074
BplI GAGNNNNNCTC 8 cut(s) 197, 229, 2746, 2778, 4405, 4437, 5887, 5919
BpmI CTGGAG 5 cut(s) 492, 2395, 3941, 4189, 4432
Bpu14I TTCGAA 1 cut(s) 5861
BpuEI CTTGAG 7 cut(s) 1088, 2815, 3515, 3954, 4320, 4407, 5899
BpuMI CCSGG 4 cut(s) 3744, 3745, 4152, 5700
BsaAI YACGTR 5 cut(s) 1303, 2879, 3800, 4819, 5990
BsaBI GATNNNNATC 1 cut(s) 1458
BsaHI GRCGYC 1 cut(s) 4680
BsaI GGTCTC 2 cut(s) 2399, 3068
BsaJI CCNNGG 8 cut(s) 1723, 2582, 2911, 3062, 3290, 3742, 3743, 5344
BsaWI WCCGGW 5 cut(s) 2386, 2806, 2923, 4562, 5426
BsaXI ACNNNNNCTCC 2 cut(s) 3640, 3670
Bse118I RCCGGY 1 cut(s) 5426
Bse3DI GCAATG 5 cut(s) 327, 886, 3224, 3475, 4064
Bse8I GATNNNNATC 1 cut(s) 1458
BseDI CCNNGG 8 cut(s) 1723, 2582, 2911, 3062, 3290, 3742, 3743, 5344
BseJI GATNNNNATC 1 cut(s) 1458
BseMI GCAATG 5 cut(s) 327, 886, 3224, 3475, 4064
BseRI GAGGAG 2 cut(s) 2259, 5405
BseSI GKGCMC 2 cut(s) 2884, 5583
BseYI CCCAGC 3 cut(s) 1166, 2138, 2979
BsgI GTGCAG 5 cut(s) 391, 2979, 4212, 4538, 5796
Bsh1236I CGCG 2 cut(s) 635, 5737
BshFI GGCC 6 cut(s) 2094, 3954, 4073, 4268, 4901, 5659
BshNI GGYRCC 2 cut(s) 3683, 4160
BshTI ACCGGT 1 cut(s) 5426
BsiHKAI GWGCWC 5 cut(s) 812, 1405, 1657, 2884, 5885
BsiHKCI CYCGRG 3 cut(s) 1211, 1418, 3743
BsiSI CCGG 9 cut(s) 2387, 2807, 2924, 3659, 3744, 4152, 4563, 5427, 5699
BsmBI CGTCTC 2 cut(s) 677, 4954
BsmI GAATGC 2 cut(s) 1106, 1575
BsnI GGCC 6 cut(s) 2094, 3954, 4073, 4268, 4901, 5659
Bso31I GGTCTC 2 cut(s) 2399, 3068
BsoBI CYCGRG 3 cut(s) 1211, 1418, 3743
Bsp119I TTCGAA 1 cut(s) 5861
Bsp1286I GDGCHC 9 cut(s) 812, 1405, 1657, 2759, 2884, 2905, 3016, 5583, 5885
Bsp1407I TGTACA 1 cut(s) 766
BspANI GGCC 6 cut(s) 2094, 3954, 4073, 4268, 4901, 5659
BspFNI CGCG 2 cut(s) 635, 5737
BspHI TCATGA 2 cut(s) 394, 5848
BspMAI CTGCAG 6 cut(s) 895, 3715, 3898, 4012, 4033, 5914
BspMI ACCTGC 6 cut(s) 541, 1666, 3077, 3529, 4924, 5683
BspQI GCTCTTC 2 cut(s) 99, 5820
BspT104I TTCGAA 1 cut(s) 5861
BspT107I GGYRCC 2 cut(s) 3683, 4160
BspTI CTTAAG 2 cut(s) 3848, 4862
BspTNI GGTCTC 2 cut(s) 2399, 3068
BsrBI CCGCTC 2 cut(s) 2575, 5258
BsrDI GCAATG 5 cut(s) 327, 886, 3224, 3475, 4064
BsrFI RCCGGY 1 cut(s) 5426
BsrGI TGTACA 1 cut(s) 766
BssAI RCCGGY 1 cut(s) 5426
BssECI CCNNGG 8 cut(s) 1723, 2582, 2911, 3062, 3290, 3742, 3743, 5344
BssNAI GTATAC 1 cut(s) 2896
BssNI GRCGYC 1 cut(s) 4680
BssSI CACGAG 3 cut(s) 216, 5014, 5281
BssT1I CCWWGG 3 cut(s) 1723, 2911, 3290
Bst1107I GTATAC 1 cut(s) 2896
Bst2BI CACGAG 3 cut(s) 216, 5014, 5281
BstACI GRCGYC 1 cut(s) 4680
BstAFI CTTAAG 2 cut(s) 3848, 4862
BstAPI GCANNNNNTGC 7 cut(s) 1913, 2869, 3242, 3875, 4028, 4037, 4058
BstAUI TGTACA 1 cut(s) 766
BstBAI YACGTR 5 cut(s) 1303, 2879, 3800, 4819, 5990
BstBI TTCGAA 1 cut(s) 5861
BstEII GGTNACC 1 cut(s) 3788
BstENI CCTNNNNNAGG 3 cut(s) 3084, 5244, 5910
BstFNI CGCG 2 cut(s) 635, 5737
BstHHI GCGC 2 cut(s) 3440, 5680
BstNSI RCATGY 4 cut(s) 2205, 3245, 3449, 3869
BstPAI GACNNNNGTC 1 cut(s) 3713
BstPI GGTNACC 1 cut(s) 3788
BstSLI GKGCMC 2 cut(s) 2884, 5583
BstUI CGCG 2 cut(s) 635, 5737
BstV2I GAAGAC 4 cut(s) 2205, 2547, 2741, 3074
BstX2I RGATCY 8 cut(s) 1108, 1482, 2381, 2513, 3815, 5795, 5993, 6006
BstXI CCANNNNNNTGG 3 cut(s) 47, 4081, 5591
BstYI RGATCY 8 cut(s) 1108, 1482, 2381, 2513, 3815, 5795, 5993, 6006
BstZ17I GTATAC 1 cut(s) 2896
BsuI GTATCC 2 cut(s) 361, 3826
BsuRI GGCC 6 cut(s) 2094, 3954, 4073, 4268, 4901, 5659
BtgZI GCGATG 2 cut(s) 771, 3222
BtrI CACGTC 2 cut(s) 3059, 5500
BtsI GCAGTG 3 cut(s) 2422, 3047, 4200
BveI ACCTGC 6 cut(s) 541, 1666, 3077, 3529, 4924, 5683
CaiI CAGNNNCTG 7 cut(s) 556, 1988, 3575, 4037, 4328, 4574, 5084
CciI TCATGA 2 cut(s) 394, 5848
CfoI GCGC 2 cut(s) 3440, 5680
Cfr10I RCCGGY 1 cut(s) 5426
Cfr9I CCCGGG 1 cut(s) 3743
CseI GACGC 4 cut(s) 1140, 2831, 4688, 5225
CsiI ACCWGGT 1 cut(s) 3726
CspAI ACCGGT 1 cut(s) 5426
DraI TTTAAA 1 cut(s) 2262
EaeI YGGCCR 2 cut(s) 2092, 4266
EciI GGCGGA 1 cut(s) 1565
Eco130I CCWWGG 3 cut(s) 1723, 2911, 3290
Eco24I GRGCYC 3 cut(s) 2759, 2905, 3016
Eco31I GGTCTC 2 cut(s) 2399, 3068
Eco32I GATATC 1 cut(s) 2943
Eco57I CTGAAG 9 cut(s) 180, 1299, 1524, 1863, 1911, 2735, 3066, 4107, 5289
Eco88I CYCGRG 3 cut(s) 1211, 1418, 3743
Eco91I GGTNACC 1 cut(s) 3788
EcoNI CCTNNNNNAGG 3 cut(s) 3084, 5244, 5910
EcoO109I RGGNCCY 3 cut(s) 2778, 4900, 5789
EcoO65I GGTNACC 1 cut(s) 3788
EcoRI GAATTC 3 cut(s) 331, 610, 3601
EcoRV GATATC 1 cut(s) 2943
EcoT14I CCWWGG 3 cut(s) 1723, 2911, 3290
EcoT22I ATGCAT 2 cut(s) 3867, 3880
EcoT38I GRGCYC 3 cut(s) 2759, 2905, 3016
ErhI CCWWGG 3 cut(s) 1723, 2911, 3290
Esp3I CGTCTC 2 cut(s) 677, 4954
FauI CCCGC 3 cut(s) 4387, 5263, 5732
FauNDI CATATG 4 cut(s) 1233, 1692, 4135, 4942
FbaI TGATCA 3 cut(s) 2437, 4114, 4894
FblI GTMKAC 6 cut(s) 1262, 2803, 2845, 2895, 4481, 5010
FriOI GRGCYC 3 cut(s) 2759, 2905, 3016
GlaI GCGC 2 cut(s) 3439, 5679
GsaI CCCAGC 3 cut(s) 1170, 2142, 2983
GsuI CTGGAG 5 cut(s) 492, 2395, 3941, 4189, 4432
HaeIII GGCC 6 cut(s) 2094, 3954, 4073, 4268, 4901, 5659
HapII CCGG 9 cut(s) 2387, 2807, 2924, 3659, 3744, 4152, 4563, 5427, 5699
HgaI GACGC 4 cut(s) 1140, 2831, 4688, 5225
HhaI GCGC 2 cut(s) 3440, 5680
Hin1I GRCGYC 1 cut(s) 4680
Hin6I GCGC 2 cut(s) 3438, 5678
HinP1I GCGC 2 cut(s) 3438, 5678
HincII GTYRAC 1 cut(s) 2846
HindII GTYRAC 1 cut(s) 2846
HindIII AAGCTT 6 cut(s) 162, 2769, 2931, 4812, 4859, 5124
HpaII CCGG 9 cut(s) 2387, 2807, 2924, 3659, 3744, 4152, 4563, 5427, 5699
Hpy99I CGWCG 5 cut(s) 310, 640, 691, 2847, 6049
Hsp92I GRCGYC 1 cut(s) 4680
HspAI GCGC 2 cut(s) 3438, 5678
KflI GGGWCCC 1 cut(s) 2778
KpnI GGTACC 1 cut(s) 4164
Ksp22I TGATCA 3 cut(s) 2437, 4114, 4894
LguI GCTCTTC 2 cut(s) 99, 5820
LmnI GCTCC 7 cut(s) 547, 1060, 1652, 2002, 2060, 5908, 5983
MabI ACCWGGT 1 cut(s) 3726
MbiI CCGCTC 2 cut(s) 2575, 5258
MfeI CAATTG 2 cut(s) 4674, 5574
MflI RGATCY 8 cut(s) 1108, 1482, 2381, 2513, 3815, 5795, 5993, 6006
MhlI GDGCHC 9 cut(s) 812, 1405, 1657, 2759, 2884, 2905, 3016, 5583, 5885
MlsI TGGCCA 1 cut(s) 2094
MluNI TGGCCA 1 cut(s) 2094
MmeI TCCRAC 6 cut(s) 288, 319, 1604, 1906, 3256, 5016
Mox20I TGGCCA 1 cut(s) 2094
Mph1103I ATGCAT 2 cut(s) 3867, 3880
MroXI GAANNNNTTC 3 cut(s) 165, 454, 2661
MscI TGGCCA 1 cut(s) 2094
MslI CAYNNNNRTG 5 cut(s) 282, 3148, 5214, 5285, 5498
Msp20I TGGCCA 1 cut(s) 2094
MspA1I CMGCKG 9 cut(s) 2138, 2443, 2546, 2979, 3209, 3899, 4013, 4034, 4265
MspCI CTTAAG 2 cut(s) 3848, 4862
MspI CCGG 9 cut(s) 2387, 2807, 2924, 3659, 3744, 4152, 4563, 5427, 5699
MunI CAATTG 2 cut(s) 4674, 5574
Mva1269I GAATGC 2 cut(s) 1106, 1575
MvnI CGCG 2 cut(s) 635, 5737
NciI CCSGG 4 cut(s) 3744, 3745, 4152, 5700
NdeI CATATG 4 cut(s) 1233, 1692, 4135, 4942
NsiI ATGCAT 2 cut(s) 3867, 3880
NspI RCATGY 4 cut(s) 2205, 3245, 3449, 3869
NspV TTCGAA 1 cut(s) 5861
PaeI GCATGC 2 cut(s) 3245, 3869
PaeR7I CTCGAG 1 cut(s) 1418
PagI TCATGA 2 cut(s) 394, 5848
PaqCI CACCTGC 2 cut(s) 1666, 3529
PciI ACATGT 2 cut(s) 2201, 3445
PciSI GCTCTTC 2 cut(s) 99, 5820
PctI GAATGC 2 cut(s) 1106, 1575
PdmI GAANNNNTTC 3 cut(s) 165, 454, 2661
PflFI GACNNNGTC 1 cut(s) 2008
PflMI CCANNNNNTGG 2 cut(s) 3782, 4658
PfoI TCCNGGA 2 cut(s) 508, 5791
PinAI ACCGGT 1 cut(s) 5426
Ppu21I YACGTR 5 cut(s) 1303, 2879, 3800, 4819, 5990
PpuMI RGGWCCY 2 cut(s) 2778, 5789
PscI ACATGT 2 cut(s) 2201, 3445
PshAI GACNNNNGTC 1 cut(s) 3713
PshBI ATTAAT 1 cut(s) 1958
PsiI TTATAA 2 cut(s) 873, 3675
Psp5II RGGWCCY 2 cut(s) 2778, 5789
PspEI GGTNACC 1 cut(s) 3788
PspFI CCCAGC 3 cut(s) 1166, 2138, 2979
PspPPI RGGWCCY 2 cut(s) 2778, 5789
PstI CTGCAG 6 cut(s) 895, 3715, 3898, 4012, 4033, 5914
PstNI CAGNNNCTG 7 cut(s) 556, 1988, 3575, 4037, 4328, 4574, 5084
PsuI RGATCY 8 cut(s) 1108, 1482, 2381, 2513, 3815, 5795, 5993, 6006
PsyI GACNNNGTC 1 cut(s) 2008
PvuII CAGCTG 8 cut(s) 2138, 2443, 2546, 2979, 3209, 3899, 4013, 4034
RseI CAYNNNNRTG 5 cut(s) 282, 3148, 5214, 5285, 5498
SalI GTCGAC 1 cut(s) 2844
SapI GCTCTTC 2 cut(s) 99, 5820
ScaI AGTACT 1 cut(s) 1035
SduI GDGCHC 9 cut(s) 812, 1405, 1657, 2759, 2884, 2905, 3016, 5583, 5885
SexAI ACCWGGT 1 cut(s) 3726
Sfr274I CTCGAG 1 cut(s) 1418
SfuI TTCGAA 1 cut(s) 5861
SlaI CTCGAG 1 cut(s) 1418
SmaI CCCGGG 1 cut(s) 3745
SmiMI CAYNNNNRTG 5 cut(s) 282, 3148, 5214, 5285, 5498
SpeI ACTAGT 3 cut(s) 2630, 3503, 4484
SphI GCATGC 2 cut(s) 3245, 3869
SspI AATATT 3 cut(s) 979, 2359, 3271
StyI CCWWGG 3 cut(s) 1723, 2911, 3290
TaqI TCGA 8 cut(s) 1419, 1623, 2845, 5861, 5931, 6030, 6047, 6059
TaqII GACCGA 1 cut(s) 1112
TatI WGTACW 5 cut(s) 766, 1033, 1859, 3506, 4438
TauI GCSGC 2 cut(s) 4043, 4268
TspGWI ACGGA 7 cut(s) 269, 704, 2870, 3157, 3302, 3571, 4359
TspMI CCCGGG 1 cut(s) 3743
Tth111I GACNNNGTC 1 cut(s) 2008
Van91I CCANNNNNTGG 2 cut(s) 3782, 4658
Vha464I CTTAAG 2 cut(s) 3848, 4862
VneI GTGCAC 1 cut(s) 2880
VspI ATTAAT 1 cut(s) 1958
XagI CCTNNNNNAGG 3 cut(s) 3084, 5244, 5910
XapI RAATTY 8 cut(s) 65, 331, 610, 2457, 3601, 4667, 5587, 5956
XbaI TCTAGA 2 cut(s) 2618, 6020
XceI RCATGY 4 cut(s) 2205, 3245, 3449, 3869
XcmI CCANNNNNNNNNTGG 2 cut(s) 493, 4407
XhoI CTCGAG 1 cut(s) 1418
XmaI CCCGGG 1 cut(s) 3743
XmiI GTMKAC 6 cut(s) 1262, 2803, 2845, 2895, 4481, 5010
XmnI GAANNNNTTC 3 cut(s) 165, 454, 2661
ZrmI AGTACT 1 cut(s) 1035
Zsp2I ATGCAT 2 cut(s) 3867, 3880
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.