Rw7G018020

Agenet domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0002656
Physical Location & Seq
Reverse (-)
19215161 .. 19225090
9930 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G018020.1

Sequence Viewer

Length: 7005 bp
ATGGAGTATGATGACAATGATTTTCAAAGCCAGAATCTTCAATTAGCTGGTGAAGGGAGCACCAATTGTCCTCCAGTTTTACAGCCATATGGTCTTCCCAAATTTGATTTTGATGACAGCCTTCAGGGGCATTTGAGGTTTGATAGTTTGGTTGAAACTGAGGTTTTTCTTGGCATTGAGAGTAGCGAAGCTAACAACTGGATTGAGGATTTCTCTCGTGGGAGTAGTGGGATAGAGTTTAGTTCAAGTGCAGTAGAATCGTGCTCTATATCAAGGCGGAACAATGTTTGGTCTGAGGCCACGTCCTCAGAATCTGTTGAAATGCTATTAAAATCTGTTGGGCAGGAAGAAATAATTCCCGCTCAGACTATCTTGGAGGAATCAGATGCCTGTAAGGAAGTGGGTTGCATAAAACAGATGGAGACTAATTTGAAAAATGATGATAACATTCTCACCGAAACAGGGGATGTTAGAGATCTACATTCTACTTTACTGCTAGATGAAACTGCCGGAAACCTTTCTGGCTTAGATAATGTTGGAGATCAGCCTCGGCTTGAGGATGCTTCACAAACTCAGGAAGTTGAATTACCGGTTGGTGGAAATTCAAGTGTTTTGGATCCAAATTCTGTCAGTGATCGGGATAGGCTGCCTGTAACTACAGGGAGCCTGACTGATGATAAAGGCAAGGATGTGAATAATATGGAATTTGATAATTTAGTTGATTATCCTCCAGATAAAAAAATGCATGAAAATTCATCTGCTTCAGAGATGCAAGTTGATAATATGATGACTTCTGTGCGAAGTATTATTACAAGCAGTGATGAGTTGAATAATCAAGATGTTCCACATCATATAGTGGATATTACTGAAGAGAATCCAAGCAGTCATGATGTGGCAAGCATAGATATTCAATGTAGGAATGATTTGGACAAACCTCATTGTTTAGCTTCAGAGGAGGAGTCTGGAAAAAAAGAAATTGCAAATGAAGATACTGTTATTGATGTGCAGGAAGCGTCTAAAATTATGCTGCAAGGGGATTCTATTTTACACACAATGGGTGGATGCAGTGATAAGGAATGTCCTGGAGTTCTTACTGAGACCAATAGATGTGAAGATCTGGTAGTGTCTAAGGACCCCGATGTTGGTGGTGATCAATCCACAATGACCTACACAAATGATGCTGGGTATGGAATTGAGGTTAGGAACAACCTTGGTGAAATTTCTTCCAGTCTAGATCCTATTCTGAAAGGGGAATCTGATTTACAGACAGTGGACAGATGCACTGACAGTGAATGCCCTGAAGTTCTTGATGACACCAACAAATGTGAAGATGTTGTTATCTCTTTTAAAGACACAGATACTGGTGGTGTTCCAGCTAAGTCTGACAAAAATGACAGTGGTTATGGCACTGAGGATCGGAACAGCAATACTGGAGTTTTGTCTGGTCTAGATCCTACCCTCAAAGGGGATTCTAACTTGTGTACAATGGATGTATGTACTGTCAAGGAATCCCCTGAAGTTCCTTCTGTCTCGTTGAAAGCTACAGACACTGGTGGTGATCAATCTAAATTACACACACCTGACTTATCACCAATGGCCTATGGGAATGACACTGGGCATGCAGTTGAACTTGGCAACAGTGTTTCTGCCTGTGTAAGCCCTACCTTGAGAACGGATAATGATTTACATACAGTGGATGCAAGTAGTGACAGGAAATGCCCTGATGTTCCTGTGGAGACCACTAAATGTGAAGACATAGTGTTGTCCAAAGGCACAGATACTACCGGTGATCAATCTAACATAAGCCCACATGTTTTATCACCTGTAGCCTACAAAAGTGATACTGTGTATGCAGATGAGGTCGGGAACAGCAATTCTGGATTTTCGTCCAGTCTAGACTCTAGATTGAAGGTGAATTCTGGAAAGAGCACCGAGGAGGATGCATTAAAAAGTGGTGGCCAACCCCTTGATAGTGAGATTTTGGTCAGAAAGTCTGAGGCTTCTATGGCAGTCATTGAGGAAACTGAGGTTTTCAAAGGCAGAGGTGATGAGAATCCGGAAGTTCATTCTAATTTGACTCCAACATGCTCTTCAGCCGAAATGCCTAGTGAAGTGCATGTGACTGGAGCTTCTAAAAGTCTTCATGATGCTTTTGGAGTTTCTGCTGAGGAATTAAATGAAGAAAGCCATGTGTCACCTTCTAATCTGAAGGAGTCTACAGAAACGTGTTCTGAAAATGAAGTTTGCAAAGAAGGCATATCTGGTAAATGTGACCAGGATCTCTCTTACAGTGAAAAGGATACTACAAATTTGCCTGTTGAATCTAATAGTATGGATTTGGAGTTTGTTGGATCTGCTGGTAAGGGAGATGAGTCCTCATCTTTGTGTGAAGATTCTGCAGAAAAAGAGTTGATTGTTCCAACACTAAAACATGATGTTGATGGCAATGCATCAGTGGCTGATGTTCCCTTGGAAAGTTGTGATCTGGCTTCTTGTGGCACAAGGGATGTTGTTCCCTTGTCTTCTGAGAATGGTGCAACCACACATATTCATAACGTATCAGTGGTTCCTGCAGCACCTTCTCCTGCTATGGGATCACACTCGGACAATAAAGGAGAAACTGCAATCGAAATATCCAAAGATACAAGTGTATCAGGTACAGTGTCATCACCGATGGTAGAATCTGGACCAGGCCCTGTTTGTGAAGCTGAAAAAGGTGCTTCTTGTGATACTGCTGGACAACTGTTATGCAATACGCTTGATCAGTCTCTGCCAATTTCAGTTAGTTGCAATACTGAAAACCAAAGTGAACCTGGAACAGCAGTTGCTATTGAAATTAGCAAGAGAAGCACAACGGATATGGAAGTAAAACGAGGTGATGATGCTGAAGCTCAAGATGGAGCAACAACAGAAAACAAATCTACCACAGAAGACAAATCTGAAAAGGCATCAGCGAATGTAACAGGTGATGCTTTTGGAAATTTTGAAGGTCCAATGCTTTCTACTTGTTCGCCCGAATCTTGTTCTAAGTCTGCTGATCCCTACCAGCCTGGTTGTGATTCTCCCAAAGAGTCGACAAATCAGAATGCCGCAGATACTAATGTAGTTGGGGATGGCGGCAAACATTCTTCTAATTCCTCGAATCCAACTGGAAATGATGTCCCCAAAGATCAGGGATATGGCACCTCAGATATCACTTCCTTTGCAGATTTGCCTATAGGGGTTGCTGCCAACAGCTCGCAGCCCTTTCCTGCTATTTCAGCTTCCAAAATTGTAGATGGGTCTCAAACAAATTCTGCCTCAGGCCAGATGGATGCAAAGATTTCGCAAGAAATTTCTCGTGGAGGTGATGGAGAGATTGCTAGTGGTGGTTCTAAAGGTACCACAGAACGGAAAAGAAGGCGAGCATCTAGTAAGGGAACAGGTAAAGAGAGTGCTAAGAAGGGAACTGTGAAAGCGACAACTCCTATGAGACAAGCAGACAGAGGAGACAAATCTAGCAGTGTGCCCCTGGGGAAATCTGGAATTTTTCAGTTTGCGCATCCAAGTGACATACAGTACTTTGGGCTTGTGGATAGTAGCTCAAAAACTTATTCAGTTCTTACTAGTGCAACATCTAGTCTGCCAGATCTGAATTCTTCTGCTCCAGCATCTCTAGTATTTCAGCAGCCTTTCACCGATCTGCAGCAAGTGCAATTACGTGCTCAGATCTTTGTTTATGGAGCTTTGATTCAAGGAACAGCACCTGATGAAGCATATATGGTGTCAGCATATGGAGGACCTGATGGTGGAAGGAGTATCTGGGAGAATGCGTGGCGTAAGTGCATAGAGAGGCTACACAGTCAAAAATCTACCCCTATTAATGCAGAAACCCTTTTGCAGTCATCCTCGGACCTGAGATTTACAGGTGGTAGGGTTCCTGATCAAGCTGGTAAACAAAGTTCATTCCAGGGTAAAGTTATCTCCTCACCTGCTGGTCGAGCCAGCACAAAGGGTATTCCACTTACTGCGAGTCCCATGATACCAATTTCATCACCGCTTTGGAGCATTCCTACCCCTGCTTGTGAGGCCCCTCAATATAATGTTCTGCCGAGAGGTTCGGTAATGGATTATCAGCAGGCCCATACTCCATTGCATCCTTTCCAAACATCACCCATAAGGAACATTGTTGGACAAAATTCCTCGTGGATGTCTCAGTCCCCGTTTCGGGGTCCCTGGGTTCCCTCTCCACAGTCATCTGCAGCTGAAACCAGTATTCGTTTCTCAGCATTTCCTAGTACAGAGTCAGTGCTGCTGACTCCTGTAAAAGAAACAACTTCATCACAAGTATCCAGTATAAAGCATGCCTCCTCGGTTGTTACTGGTCAAACTGGGGGTACAACCAGTGTTTTTGCAGGGGTTTCTCCACTGCTTGACTCAAAGAAAGTGGGAGTAGCATCACCTGGCGAGCCTTCATCTCAACCTAAGTCTAGAAAAAGAAAAAAGATCTCAGATTCTAAGGAACTTGGTCCGATTAGTTTGCAGCCTCAATCTGAACCTGAGTCAGCTATAACCCTGGCTGTTACTAGTAGTGTATCTACATCTGTTGTAGTCACTGCCCCAAGTACCTTTGTGTCTAAGGCCATGCCAGAAAAATTGGCTATGTCGGTATCCTCTGATCAACTCAAGAAAGCAGATCTTGGTTTGGAGCAGAGGGCAACTTTATCAAAAGAGACTCTTAGTAAAGCTAAGGAGGCTAGGCAACAAGCAGAGGAAGCTTCTGCTCATGCTGCTGCAGCTGTTGGTCACAGTCAAGAAATATGGAGTCAGTTGGATAAGCAGAAACATTCCGGATTGACATCAGATGCCGAAACCAAATTAGCTTCTGCTGCTGTTGCTGTAGCTGCCGCCGCTGCTGTTGCAAAAGCAGCAGCTGCAGCTGCCAATGTTGCGGCAAATGCTGCATTGCAAGCAGTACTGATGGCTGAGGAAGCCTATGGGAATCAAAGCGAAAGTATGATAGATTTGAGTACTGATGGAGTGAATGCATTGGGATTGGCTGCTCCAGGATCTGTTTTTAGGGCTGAGGATGGAACAAACAGTTCAAGTTCAATCCTTTTTGCTGCTAGAGAGGCTGCTAGAAGGAGGGTTGAAGCTGCATCTGCAGCCTCAAAGCGAGCTGAAAATATGGACGCCATAGTAAAAGCTGCTGAGCTAGCCGCAGAAGCTGTATCACAAGCTGGAACAGTTGTTGCTATGGGTGATCCTGTGCCTTTGAGCGACTTGGTAAAAGCTGGTCCTGAGGGTTATTGGAAAGCACCCCAAGTATCTTCAGAGACTGTTAAGAAATCAAATGACGGAATGAGGGAACAATCAAATTTTTCCACTGTTGGAGAAGATTCAGATAAGGAAGAAACACTGATCACTGCCACTAAGAAATCGCCTACAGTCAGTGAAAGGGTTACTGAGATTATAAAGTCTGCTTTGCCCACTGCTGGGAATGATCTTGGAAAAACTGCAGTAGCGTCCAAAGATAGCTGCATCTTTGAGGGTTCTCAAGTAGAGGTTTTCAAAGAAGGGGGTGGATTTGCAGTGGGCTGGTTCACAGCTACTGTATTGAGTTTGCAGGATGGCAAAGCATGTGTATGTTACACTGAGCTTCAGTCAGACGAAGGCTCAGGGAAACTACAGGAATGGGTGGCACTTGACAGCAAAGACGATAAGCCACCAAAAATACGTGTTGCTCGCCTTCTTACCCCCTCCCTTGAAGGAACAAGGAAAAGGCGGAGAGAAGCAATGGCAGATTACGCTTGGTCTGTTGGAGACAAAGTTGATGCCTGGATACAAAACAGCTGGTGGGAAGGTGTTGTGACTGAAAAAAACAAGAAAGATGAAACTATACTAAAAGTCCACTTTCCAGCTCAAGGGGAAACATCACATGTTAAAGCTTGGCATCTTCGGCCTTCTCTGATTTGGAAGGATGGGGAATGGGTTGAATGGTCCAGTGTGCGGAATGACGGCTCTTCCATGGAGGATGGCTTGCCGCAGGAAAAGCGAATCAAATTGGGCAGTTCTACAGTGGAAGGAAAAGGGAAGGATAAGACTTTAAAAAGCAATGTTCTTGATTCAGGAAAACCTGAAGAGCCAAGTTTGCTGAATTTGTCTGCAAATGAAAAGGTATTTAATATAGGTAAAAATACCAGGATTGAGAATAAGCTTGATGGAGCCAGAACAAATCGGACAGGGTTGCAGAAGGAAGGATCAGTAAAATTTGGTATTCCGAAGCCCAAAAGAAAATTTATGGAAGTTAGCAAGCATTATGTGGCCAATCAGACTAGTAAGGTTAACGAGTCTAATGAGTCGGTGAAATTTGCGAAATATTTGATGCCACAATCATCAGGTTTCCGTGCATTGAAAAATACATCTAAATTTGATACAAAGGACAAAGAGGGGGCCGATAACAAGCTAAGGGGTTTTAGATCTGAAAAGCAGCGAAGTATGTCGGATAAAACAGTTCCTCAGAAGGACAACTTTTCAATAGATTTAGTTTCTGCTGCGGATGGCTCCAGTAAGATGGACCATACAAGAAAGGTCAAAGACTCTGTAAGACAAGCTGAGGGTTTATCTGGCAAGCGCAACATATTTGAGACGGGATCAGGTTATAGCTCAGACGGAAGAGCACAGGGCGCAGCCATGTTTTCTTCACGAACTCCGTCGTCAGATTTACCTCCATCCAAGAAGGTAGCCACTACAACTGCTAAATCCGAACGGGGAAATAAAGGAAATTTTGCACCAGTTGTTGGAAAGTTGGGTAAAATTGAGGAGGGCAAAGGTACAAGTAGTAATCCTGTAAGGTCAACTTCAGAAGCAGTCGAGCCTCGTAGATCAAATCGCAGAATTCAGCCAACATCAAGACTATTAGAAGGACTGCAAAGTTCGTTGAGCATTTCAAAGATTCCTTCCGTTTCGCATGAGAAGCCCAGAAGTCAGAATAGAAATGGTTCTAGAGGGAGTAACCATGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Agenet

Protein Analysis

2334

Amino Acids

248.05

Weight (kDa)

4.92

Isoelectric Point (pI)

50.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Agenet PF05641 1844 - 1896 1.4e-10 Agenet domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 5453
AarI CACCTGC 1 cut(s) 3979
Acc16I TGCGCA 1 cut(s) 3540
Acc36I ACCTGC 1 cut(s) 3979
Acc65I GGTACC 1 cut(s) 3380
AccB1I GGYRCC 2 cut(s) 3182, 3380
AccB7I CCANNNNNTGG 1 cut(s) 6779
AccBSI CCGCTC 1 cut(s) 362
AccI GTMKAC 2 cut(s) 2216, 3074
AccIII TCCGGA 2 cut(s) 2056, 4829
AcoI YGGCCR 2 cut(s) 1957, 6303
AcyI GRCGYC 1 cut(s) 5172
AflIII ACRYGT 4 cut(s) 1810, 2225, 5716, 5917
AgeI ACCGGT 2 cut(s) 589, 1784
AhlI ACTAGT 3 cut(s) 3605, 4565, 6314
AjiI CACGTC 1 cut(s) 303
AjuI GAANNNNNNNTTGG 4 cut(s) 576, 608, 2074, 2106
Alw21I GWGCWC 5 cut(s) 62, 266, 1931, 3706, 6661
Aor13HI TCCGGA 2 cut(s) 2056, 4829
AseI ATTAAT 1 cut(s) 3861
AsiGI ACCGGT 2 cut(s) 589, 1784
Asp700I GAANNNNTTC 3 cut(s) 354, 517, 6979
Asp718I GGTACC 1 cut(s) 3380
AspLEI GCGC 3 cut(s) 3541, 6615, 6668
AsuNHI GCTAGC 1 cut(s) 5194
AxyI CCTNAGG 2 cut(s) 3301, 5280
BaeGI GKGCMC 1 cut(s) 3510
BaeI ACNNNNGTAYC 6 cut(s) 2634, 2634, 2667, 2667, 3087, 3120
BalI TGGCCA 2 cut(s) 1959, 6305
BamHI GGATCC 1 cut(s) 616
BanI GGYRCC 2 cut(s) 3182, 3380
BarI GAAGNNNNNNTAC 4 cut(s) 570, 602, 793, 825
BauI CACGAG 3 cut(s) 216, 3339, 4183
BbsI GAAGAC 5 cut(s) 86, 1758, 2132, 2514, 2937
Bbv12I GWGCWC 5 cut(s) 62, 266, 1931, 3706, 6661
BbvCI CCTCAGC 4 cut(s) 2166, 4965, 5064, 6594
BceAI ACGGC 1 cut(s) 6013
BcgI CGANNNNNNTGC 8 cut(s) 240, 274, 1922, 1956, 3306, 3340, 4501, 4535
BciVI GTATCC 4 cut(s) 2293, 4339, 4660, 5814
BclI TGATCA 7 cut(s) 1150, 1558, 1789, 2761, 3922, 4657, 5400
BcuI ACTAGT 3 cut(s) 3605, 4565, 6314
BfuAI ACCTGC 1 cut(s) 3979
BfuI GTATCC 4 cut(s) 2293, 4339, 4660, 5814
BglII AGATCT 7 cut(s) 475, 1114, 3628, 3708, 4485, 4675, 6458
BlpI GCTNAGC 1 cut(s) 5190
BmcAI AGTACT 3 cut(s) 3560, 4956, 5011
BmgBI CACGTC 1 cut(s) 303
BmrI ACTGGG 2 cut(s) 1623, 4380
BmtI GCTAGC 1 cut(s) 5198
BmuI ACTGGG 2 cut(s) 1623, 4380
BpiI GAAGAC 5 cut(s) 86, 1758, 2132, 2514, 2937
BplI GAGNNNNNCTC 2 cut(s) 197, 229
BpmI CTGGAG 8 cut(s) 57, 714, 1104, 1452, 2145, 3630, 5028, 6529
Bpu10I CCTNAGC 7 cut(s) 2166, 4728, 4965, 5064, 5656, 6446, 6594
Bpu1102I GCTNAGC 1 cut(s) 5190
BpuEI CTTGAG 6 cut(s) 575, 1687, 2877, 4649, 5520, 5886
BsaAI YACGTR 2 cut(s) 3701, 5717
BsaBI GATNNNNATC 2 cut(s) 2052, 4837
BsaHI GRCGYC 1 cut(s) 5172
BsaI GGTCTC 3 cut(s) 1091, 1730, 3288
BsaWI WCCGGW 4 cut(s) 589, 1784, 2056, 4829
BsaXI ACNNNNNCTCC 4 cut(s) 3797, 3827, 5793, 5823
Bse118I RCCGGY 2 cut(s) 589, 1784
Bse21I CCTNAGG 2 cut(s) 3301, 5280
Bse3DI GCAATG 5 cut(s) 2452, 4130, 4943, 5781, 6100
Bse8I GATNNNNATC 2 cut(s) 2052, 4837
BseAI TCCGGA 2 cut(s) 2056, 4829
BseJI GATNNNNATC 2 cut(s) 2052, 4837
BseMI GCAATG 5 cut(s) 2452, 4130, 4943, 5781, 6100
BseRI GAGGAG 7 cut(s) 968, 971, 1949, 3501, 3955, 4339, 6815
BseSI GKGCMC 1 cut(s) 3510
BseYI CCCAGC 2 cut(s) 1181, 5474
BsgI GTGCAG 2 cut(s) 270, 1025
BshNI GGYRCC 2 cut(s) 3182, 3380
BshTI ACCGGT 2 cut(s) 589, 1784
BsiHKAI GWGCWC 5 cut(s) 62, 266, 1931, 3706, 6661
BsiSI CCGG 5 cut(s) 510, 590, 1785, 2057, 4830
BslFI GGGAC 4 cut(s) 3146, 3999, 4183, 4197
BsmBI CGTCTC 1 cut(s) 6620
BsmFI GGGAC 4 cut(s) 3146, 3999, 4183, 4197
BsmI GAATGC 5 cut(s) 1298, 3091, 3814, 4047, 5029
Bso31I GGTCTC 3 cut(s) 1091, 1730, 3288
Bsp1286I GDGCHC 6 cut(s) 62, 266, 1931, 3510, 3706, 6661
Bsp13I TCCGGA 2 cut(s) 2056, 4829
Bsp1407I TGTACA 1 cut(s) 1481
Bsp1720I GCTNAGC 1 cut(s) 5190
Bsp19I CCATGG 1 cut(s) 6006
BspEI TCCGGA 2 cut(s) 2056, 4829
BspHI TCATGA 2 cut(s) 886, 2143
BspMAI CTGCAG 8 cut(s) 2401, 2575, 3687, 4243, 4777, 4918, 5146, 5500
BspMI ACCTGC 1 cut(s) 3979
BspOI GCTAGC 1 cut(s) 5198
BspQI GCTCTTC 4 cut(s) 2095, 6007, 6114, 6649
BspT107I GGYRCC 2 cut(s) 3182, 3380
BspTNI GGTCTC 3 cut(s) 1091, 1730, 3288
BsrBI CCGCTC 1 cut(s) 362
BsrDI GCAATG 5 cut(s) 2452, 4130, 4943, 5781, 6100
BsrFI RCCGGY 2 cut(s) 589, 1784
BsrGI TGTACA 1 cut(s) 1481
BssAI RCCGGY 2 cut(s) 589, 1784
BssNI GRCGYC 1 cut(s) 5172
BssSI CACGAG 3 cut(s) 216, 3339, 4183
BssT1I CCWWGG 3 cut(s) 1210, 2469, 6006
Bst2BI CACGAG 3 cut(s) 216, 3339, 4183
Bst6I CTCTTC 5 cut(s) 864, 2095, 6007, 6114, 6649
BstACI GRCGYC 1 cut(s) 5172
BstAPI GCANNNNNTGC 3 cut(s) 3691, 4913, 4940
BstAUI TGTACA 1 cut(s) 1481
BstBAI YACGTR 2 cut(s) 3701, 5717
BstDSI CCRYGG 1 cut(s) 6006
BstHHI GCGC 3 cut(s) 3541, 6615, 6668
BstNSI RCATGY 7 cut(s) 1622, 1814, 2088, 2120, 4346, 5622, 5921
BstSLI GKGCMC 1 cut(s) 3510
BstV2I GAAGAC 5 cut(s) 86, 1758, 2132, 2514, 2937
BstXI CCANNNNNNTGG 1 cut(s) 6553
Bsu36I CCTNAGG 2 cut(s) 3301, 5280
BsuI GTATCC 4 cut(s) 2293, 4339, 4660, 5814
BtgI CCRYGG 1 cut(s) 6006
BtrI CACGTC 1 cut(s) 303
BtsI GCAGTG 8 cut(s) 823, 1072, 3508, 4406, 4593, 5403, 5469, 5577
BveI ACCTGC 1 cut(s) 3979
CciI TCATGA 2 cut(s) 886, 2143
CfoI GCGC 3 cut(s) 3541, 6615, 6668
Cfr10I RCCGGY 2 cut(s) 589, 1784
CseI GACGC 3 cut(s) 1002, 5180, 5493
CspAI ACCGGT 2 cut(s) 589, 1784
CspCI CAANNNNNGTGG 2 cut(s) 4407, 4442
DraI TTTAAA 2 cut(s) 1348, 6087
EaeI YGGCCR 2 cut(s) 1957, 6303
Eam1104I CTCTTC 5 cut(s) 864, 2095, 6007, 6114, 6649
EarI CTCTTC 5 cut(s) 864, 2095, 6007, 6114, 6649
EciI GGCGGA 2 cut(s) 292, 5779
Eco130I CCWWGG 3 cut(s) 1210, 2469, 6006
Eco31I GGTCTC 3 cut(s) 1091, 1730, 3288
Eco32I GATATC 1 cut(s) 3193
Eco81I CCTNAGG 2 cut(s) 3301, 5280
EcoO109I RGGNCCY 5 cut(s) 1132, 2693, 3779, 4069, 4211
EcoRI GAATTC 3 cut(s) 1915, 3634, 6876
EcoRV GATATC 1 cut(s) 3193
EcoT14I CCWWGG 3 cut(s) 1210, 2469, 6006
EcoT22I ATGCAT 4 cut(s) 747, 1945, 2452, 5029
ErhI CCWWGG 3 cut(s) 1210, 2469, 6006
Esp3I CGTCTC 1 cut(s) 6620
FalI AAGNNNNNCTT 8 cut(s) 4662, 4694, 4701, 4733, 6494, 6526, 6823, 6855
FaqI GGGAC 4 cut(s) 3146, 3999, 4183, 4197
FauI CCCGC 1 cut(s) 367
FauNDI CATATG 2 cut(s) 88, 3772
FbaI TGATCA 7 cut(s) 1150, 1558, 1789, 2761, 3922, 4657, 5400
FblI GTMKAC 2 cut(s) 2216, 3074
FspI TGCGCA 1 cut(s) 3540
GlaI GCGC 3 cut(s) 3540, 6614, 6667
GsaI CCCAGC 2 cut(s) 1185, 5478
GsuI CTGGAG 8 cut(s) 57, 714, 1104, 1452, 2145, 3630, 5028, 6529
HapII CCGG 5 cut(s) 510, 590, 1785, 2057, 4830
HgaI GACGC 3 cut(s) 1002, 5180, 5493
HhaI GCGC 3 cut(s) 3541, 6615, 6668
Hin1I GRCGYC 1 cut(s) 5172
Hin6I GCGC 3 cut(s) 3539, 6613, 6666
HinP1I GCGC 3 cut(s) 3539, 6613, 6666
HincII GTYRAC 3 cut(s) 3075, 6325, 6837
HindII GTYRAC 3 cut(s) 3075, 6325, 6837
HindIII AAGCTT 3 cut(s) 4755, 5925, 6194
HpaI GTTAAC 1 cut(s) 6325
HpaII CCGG 5 cut(s) 510, 590, 1785, 2057, 4830
Hpy99I CGWCG 1 cut(s) 6697
HpyCH4IV ACGT 5 cut(s) 302, 2225, 2556, 3700, 5716
HpySE526I ACGT 5 cut(s) 302, 2225, 2556, 3700, 5716
Hsp92I GRCGYC 1 cut(s) 5172
HspAI GCGC 3 cut(s) 3539, 6613, 6666
KflI GGGWCCC 1 cut(s) 4211
Kpn2I TCCGGA 2 cut(s) 2056, 4829
KpnI GGTACC 1 cut(s) 3384
Ksp22I TGATCA 7 cut(s) 1150, 1558, 1789, 2761, 3922, 4657, 5400
KspAI GTTAAC 1 cut(s) 6325
LguI GCTCTTC 4 cut(s) 2095, 6007, 6114, 6649
MaeII ACGT 5 cut(s) 302, 2225, 2556, 3700, 5716
MbiI CCGCTC 1 cut(s) 362
MfeI CAATTG 1 cut(s) 64
MhlI GDGCHC 6 cut(s) 62, 266, 1931, 3510, 3706, 6661
MlsI TGGCCA 2 cut(s) 1959, 6305
MluNI TGGCCA 2 cut(s) 1959, 6305
Mox20I TGGCCA 2 cut(s) 1959, 6305
Mph1103I ATGCAT 4 cut(s) 747, 1945, 2452, 5029
MroI TCCGGA 2 cut(s) 2056, 4829
MroXI GAANNNNTTC 3 cut(s) 354, 517, 6979
MscI TGGCCA 2 cut(s) 1959, 6305
MslI CAYNNNNRTG 3 cut(s) 2383, 3546, 5623
Msp20I TGGCCA 2 cut(s) 1959, 6305
MspA1I CMGCKG 6 cut(s) 4244, 4778, 4892, 4913, 4919, 5832
MspI CCGG 5 cut(s) 510, 590, 1785, 2057, 4830
MunI CAATTG 1 cut(s) 64
Mva1269I GAATGC 5 cut(s) 1298, 3091, 3814, 4047, 5029
NcoI CCATGG 1 cut(s) 6006
NdeI CATATG 2 cut(s) 88, 3772
NheI GCTAGC 1 cut(s) 5194
NmeAIII GCCGAG 2 cut(s) 529, 4116
NmuCI GTSAC 8 cut(s) 1706, 2119, 2193, 2270, 3548, 4591, 4784, 5848
NsbI TGCGCA 1 cut(s) 3540
NsiI ATGCAT 4 cut(s) 747, 1945, 2452, 5029
NspI RCATGY 7 cut(s) 1622, 1814, 2088, 2120, 4346, 5622, 5921
PaeI GCATGC 2 cut(s) 1622, 4346
PagI TCATGA 2 cut(s) 886, 2143
PaqCI CACCTGC 1 cut(s) 3979
PasI CCCWGGG 2 cut(s) 3511, 4215
PciI ACATGT 2 cut(s) 1810, 5917
PciSI GCTCTTC 4 cut(s) 2095, 6007, 6114, 6649
PctI GAATGC 5 cut(s) 1298, 3091, 3814, 4047, 5029
PdmI GAANNNNTTC 3 cut(s) 354, 517, 6979
PflMI CCANNNNNTGG 1 cut(s) 6779
PfoI TCCNGGA 2 cut(s) 1081, 5044
PinAI ACCGGT 2 cut(s) 589, 1784
Ppu21I YACGTR 2 cut(s) 3701, 5717
PpuMI RGGWCCY 3 cut(s) 1132, 3779, 4211
PscI ACATGT 2 cut(s) 1810, 5917
PshBI ATTAAT 1 cut(s) 3861
PsiI TTATAA 1 cut(s) 5453
Psp5II RGGWCCY 3 cut(s) 1132, 3779, 4211
PspFI CCCAGC 2 cut(s) 1181, 5474
PspPPI RGGWCCY 3 cut(s) 1132, 3779, 4211
PsrI GAACNNNNNNTAC 4 cut(s) 2550, 2582, 3925, 3957
PstI CTGCAG 8 cut(s) 2401, 2575, 3687, 4243, 4777, 4918, 5146, 5500
PvuII CAGCTG 5 cut(s) 4244, 4778, 4913, 4919, 5832
RseI CAYNNNNRTG 3 cut(s) 2383, 3546, 5623
SalI GTCGAC 1 cut(s) 3073
SapI GCTCTTC 4 cut(s) 2095, 6007, 6114, 6649
ScaI AGTACT 3 cut(s) 3560, 4956, 5011
SduI GDGCHC 6 cut(s) 62, 266, 1931, 3510, 3706, 6661
SmiMI CAYNNNNRTG 3 cut(s) 2383, 3546, 5623
SmlI CTYRAG 6 cut(s) 554, 1666, 2892, 4664, 5535, 5901
SmoI CTYRAG 6 cut(s) 554, 1666, 2892, 4664, 5535, 5901
SpeI ACTAGT 3 cut(s) 3605, 4565, 6314
SphI GCATGC 2 cut(s) 1622, 4346
SspI AATATT 1 cut(s) 6359
StyI CCWWGG 3 cut(s) 1210, 2469, 6006
TaiI ACGT 5 cut(s) 305, 2228, 2559, 3703, 5719
TaqI TCGA 5 cut(s) 2628, 3074, 3140, 3979, 6852
TatI WGTACW 6 cut(s) 1481, 1496, 3558, 4277, 4954, 5009
TauI GCSGC 7 cut(s) 3092, 3120, 4889, 4892, 4934, 5201, 6025
TseFI GTSAC 8 cut(s) 1706, 2119, 2193, 2270, 3548, 4591, 4784, 5848
Tsp45I GTSAC 8 cut(s) 1706, 2119, 2193, 2270, 3548, 4591, 4784, 5848
TspGWI ACGGA 8 cut(s) 1688, 2870, 3406, 5352, 6374, 6666, 6681, 6931
Van91I CCANNNNNTGG 1 cut(s) 6779
VspI ATTAAT 1 cut(s) 3861
XbaI TCTAGA 6 cut(s) 1231, 1447, 1894, 1901, 4469, 6983
XceI RCATGY 7 cut(s) 1622, 1814, 2088, 2120, 4346, 5622, 5921
XcmI CCANNNNNNNNNTGG 1 cut(s) 2810
XmiI GTMKAC 2 cut(s) 2216, 3074
XmnI GAANNNNTTC 3 cut(s) 354, 517, 6979
ZrmI AGTACT 3 cut(s) 3560, 4956, 5011
Zsp2I ATGCAT 4 cut(s) 747, 1945, 2452, 5029
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.