Agenet domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G17330 AT4G17330 AT4G17330 |
| fragaria_vesca | FvH4_5g19090 FvH4_5g19090 FvH4_5g19090 |
| malus_domestica | MD04G1062800.v1.1 MD06G1057100.v1.1 |
| prunus_persica | Prupe.5G068000_v2.0.a1 Prupe.5G068000_v2.0.a1 Prupe.5G068000_v2.0.a1 Prupe.5G068000_v2.0.a1 Prupe.5G068000_v2.0.a1 Prupe.5G068000_v2.0.a1 Prupe.5G068000_v2.0.a1 Prupe.5G068000_v2.0.a1 |
| pyrus_communis | pycom04g05620 pycom04g05630 pycom04g05650 pycom06g04780 pycom06g04790 |
| rosa_chinensis | RchiOBHm_Chr7g0203541 |
| rosa_laevigata | RLG00000003521 |
| rosa_multiflora | Rmu_co8304519.1_g000001 Rmu_co8320585.1_g000001 Rmu_sc0007812.1_g000001 Rmu_sc0010675.1_g000010 Rmu_sc0021549.1_g000001 Rmu_sc0028511.1_g000001 Rmu_ssc0000362.1_g000008 |
| rosa_roxburghii | Rroxscaffold_3G00253720 |
| rosa_rugosa | Rorug07G0076800 Rorug07G0076800 Rorug07G0076800 Rorug07G0076800 |
| rosa_samantha | Rh7AG206400 Rh7BG206000 Rh7CG218900 Rh7DG213600 |
| rosa_wichuraiana | Rw7G018020 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 866, 5394 |
| Acc16I | TGCGCA | 2 cut(s) | 875, 3336 |
| AccB1I | GGYRCC | 1 cut(s) | 3875 |
| AccB7I | CCANNNNNTGG | 4 cut(s) | 1583, 2006, 2840, 3045 |
| AccI | GTMKAC | 4 cut(s) | 3734, 3844, 4415, 6087 |
| AccII | CGCG | 1 cut(s) | 4739 |
| AclI | AACGTT | 1 cut(s) | 4002 |
| AcoI | YGGCCR | 1 cut(s) | 2076 |
| AdeI | CACNNNGTG | 2 cut(s) | 2438, 3251 |
| AfeI | AGCGCT | 1 cut(s) | 3319 |
| AflIII | ACRYGT | 4 cut(s) | 1288, 1694, 1726, 3451 |
| AhlI | ACTAGT | 2 cut(s) | 3226, 4223 |
| AjnI | CCWGG | 9 cut(s) | 1053, 1893, 2635, 3011, 3779, 4055, 5543, 5988, 6238 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1261, 1293, 1854, 1886 |
| AleI | CACNNNNGTG | 1 cut(s) | 2002 |
| Alw21I | GWGCWC | 2 cut(s) | 1322, 3589 |
| Alw26I | GTCTC | 7 cut(s) | 359, 1645, 3349, 3366, 3428, 4248, 4556 |
| AlwNI | CAGNNNCTG | 6 cut(s) | 314, 2315, 2972, 4334, 4763, 5036 |
| Ama87I | CYCGRG | 2 cut(s) | 1434, 3772 |
| Aor51HI | AGCGCT | 1 cut(s) | 3319 |
| ApaI | GGGCCC | 1 cut(s) | 2949 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 2237, 2269, 4253, 4285, 5153, 5185 |
| AseI | ATTAAT | 2 cut(s) | 2754, 6303 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 354 |
| AspA2I | CCTAGG | 1 cut(s) | 1184 |
| AspLEI | GCGC | 5 cut(s) | 279, 876, 3320, 3337, 5730 |
| AsuII | TTCGAA | 1 cut(s) | 2099 |
| AsuNHI | GCTAGC | 1 cut(s) | 2012 |
| AvaI | CYCGRG | 2 cut(s) | 1434, 3772 |
| AvaII | GGWCC | 6 cut(s) | 291, 1992, 4052, 4196, 5105, 5387 |
| AvrII | CCTAGG | 1 cut(s) | 1184 |
| BaeGI | GKGCMC | 3 cut(s) | 2949, 3880, 4884 |
| BalI | TGGCCA | 1 cut(s) | 2078 |
| BamHI | GGATCC | 2 cut(s) | 853, 6416 |
| BanI | GGYRCC | 1 cut(s) | 3875 |
| BanII | GRGCYC | 2 cut(s) | 2949, 3787 |
| BauI | CACGAG | 4 cut(s) | 216, 576, 3246, 6394 |
| BbsI | GAAGAC | 5 cut(s) | 1818, 2133, 2557, 2697, 4068 |
| Bbv12I | GWGCWC | 2 cut(s) | 1322, 3589 |
| BbvCI | CCTCAGC | 2 cut(s) | 4035, 4815 |
| BceAI | ACGGC | 1 cut(s) | 3538 |
| BciT130I | CCWGG | 9 cut(s) | 1055, 1895, 2637, 3013, 3781, 4057, 5545, 5990, 6240 |
| BciVI | GTATCC | 3 cut(s) | 3715, 5778, 6239 |
| BclI | TGATCA | 3 cut(s) | 1150, 2380, 5323 |
| BcoDI | GTCTC | 7 cut(s) | 359, 1645, 3349, 3366, 3428, 4248, 4556 |
| BcuI | ACTAGT | 2 cut(s) | 3226, 4223 |
| BfoI | RGCGCY | 1 cut(s) | 3321 |
| BfuI | GTATCC | 3 cut(s) | 3715, 5778, 6239 |
| BglII | AGATCT | 2 cut(s) | 478, 3511 |
| BlnI | CCTAGG | 1 cut(s) | 1184 |
| BmcAI | AGTACT | 2 cut(s) | 61, 4096 |
| Bme1390I | CCNGG | 9 cut(s) | 1055, 1895, 2637, 3013, 3781, 4057, 5545, 5990, 6240 |
| Bme18I | GGWCC | 6 cut(s) | 291, 1992, 4052, 4196, 5105, 5387 |
| BmeT110I | CYCGRG | 2 cut(s) | 1434, 3772 |
| BmrFI | CCNGG | 9 cut(s) | 1055, 1895, 2637, 3013, 3781, 4057, 5545, 5990, 6240 |
| BmrI | ACTGGG | 1 cut(s) | 2960 |
| BmtI | GCTAGC | 1 cut(s) | 2016 |
| BmuI | ACTGGG | 1 cut(s) | 2960 |
| BpiI | GAAGAC | 5 cut(s) | 1818, 2133, 2557, 2697, 4068 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 197, 229, 4808, 4840 |
| BpmI | CTGGAG | 3 cut(s) | 57, 1794, 4230 |
| Bpu10I | CCTNAGC | 4 cut(s) | 4035, 4302, 4815, 5556 |
| Bpu14I | TTCGAA | 1 cut(s) | 2099 |
| BpuEI | CTTGAG | 5 cut(s) | 870, 4071, 5115, 5993, 6333 |
| Bsa29I | ATCGAT | 1 cut(s) | 6438 |
| BsaAI | YACGTR | 2 cut(s) | 3584, 4026 |
| BsaI | GGTCTC | 1 cut(s) | 1645 |
| BsaWI | WCCGGW | 2 cut(s) | 6319, 6463 |
| Bse118I | RCCGGY | 1 cut(s) | 47 |
| Bse3DI | GCAATG | 5 cut(s) | 1480, 2691, 3968, 5407, 5745 |
| BseBI | CCWGG | 9 cut(s) | 1055, 1895, 2637, 3013, 3781, 4057, 5545, 5990, 6240 |
| BseCI | ATCGAT | 1 cut(s) | 6438 |
| BseMI | GCAATG | 5 cut(s) | 1480, 2691, 3968, 5407, 5745 |
| BseRI | GAGGAG | 4 cut(s) | 558, 1835, 3384, 4574 |
| BseSI | GKGCMC | 3 cut(s) | 2949, 3880, 4884 |
| BseYI | CCCAGC | 3 cut(s) | 2207, 2747, 3848 |
| BsgI | GTGCAG | 7 cut(s) | 797, 2460, 3168, 3443, 4151, 5256, 6461 |
| Bsh1236I | CGCG | 1 cut(s) | 4739 |
| BshNI | GGYRCC | 1 cut(s) | 3875 |
| BshVI | ATCGAT | 1 cut(s) | 6438 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1322, 3589 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1434, 3772 |
| BsiSI | CCGG | 3 cut(s) | 48, 6320, 6464 |
| BslFI | GGGAC | 7 cut(s) | 1600, 2495, 3005, 3376, 3675, 4038, 5718 |
| BsmAI | GTCTC | 7 cut(s) | 359, 1645, 3349, 3366, 3428, 4248, 4556 |
| BsmFI | GGGAC | 7 cut(s) | 1600, 2495, 3005, 3376, 3675, 4038, 5718 |
| BsmI | GAATGC | 9 cut(s) | 756, 1082, 1792, 2131, 2965, 3809, 4288, 4792, 4852 |
| Bso31I | GGTCTC | 1 cut(s) | 1645 |
| BsoBI | CYCGRG | 2 cut(s) | 1434, 3772 |
| Bsp119I | TTCGAA | 1 cut(s) | 2099 |
| Bsp120I | GGGCCC | 1 cut(s) | 2945 |
| Bsp1286I | GDGCHC | 6 cut(s) | 1322, 2949, 3589, 3787, 3880, 4884 |
| BspDI | ATCGAT | 1 cut(s) | 6438 |
| BspFNI | CGCG | 1 cut(s) | 4739 |
| BspMAI | CTGCAG | 9 cut(s) | 253, 4084, 4216, 4627, 4726, 4768, 4975, 5631, 6022 |
| BspOI | GCTAGC | 1 cut(s) | 2016 |
| BspQI | GCTCTTC | 1 cut(s) | 99 |
| BspT104I | TTCGAA | 1 cut(s) | 2099 |
| BspT107I | GGYRCC | 1 cut(s) | 3875 |
| BspTNI | GGTCTC | 1 cut(s) | 1645 |
| BsrDI | GCAATG | 5 cut(s) | 1480, 2691, 3968, 5407, 5745 |
| BsrFI | RCCGGY | 1 cut(s) | 47 |
| BssAI | RCCGGY | 1 cut(s) | 47 |
| BssSI | CACGAG | 4 cut(s) | 216, 576, 3246, 6394 |
| BssT1I | CCWWGG | 5 cut(s) | 1184, 1545, 2256, 3039, 6092 |
| Bst2BI | CACGAG | 4 cut(s) | 216, 576, 3246, 6394 |
| Bst2UI | CCWGG | 9 cut(s) | 1055, 1895, 2637, 3013, 3781, 4057, 5545, 5990, 6240 |
| Bst6I | CTCTTC | 5 cut(s) | 99, 843, 1909, 2707, 6242 |
| BstAPI | GCANNNNNTGC | 5 cut(s) | 3251, 3574, 4718, 4763, 4787 |
| BstBAI | YACGTR | 2 cut(s) | 3584, 4026 |
| BstBI | TTCGAA | 1 cut(s) | 2099 |
| BstDSI | CCRYGG | 3 cut(s) | 497, 4737, 6364 |
| BstEII | GGTNACC | 3 cut(s) | 1429, 1462, 3262 |
| BstFNI | CGCG | 1 cut(s) | 4739 |
| BstH2I | RGCGCY | 1 cut(s) | 3321 |
| BstHHI | GCGC | 5 cut(s) | 279, 876, 3320, 3337, 5730 |
| BstMAI | GTCTC | 7 cut(s) | 359, 1645, 3349, 3366, 3428, 4248, 4556 |
| BstNI | CCWGG | 9 cut(s) | 1055, 1895, 2637, 3013, 3781, 4057, 5545, 5990, 6240 |
| BstNSI | RCATGY | 9 cut(s) | 1292, 1698, 1730, 1802, 2632, 3455, 3685, 4187, 5170 |
| BstPI | GGTNACC | 3 cut(s) | 1429, 1462, 3262 |
| BstSCI | CCNGG | 9 cut(s) | 1053, 1893, 2635, 3011, 3779, 4055, 5543, 5988, 6238 |
| BstSLI | GKGCMC | 3 cut(s) | 2949, 3880, 4884 |
| BstUI | CGCG | 1 cut(s) | 4739 |
| BstV2I | GAAGAC | 5 cut(s) | 1818, 2133, 2557, 2697, 4068 |
| BstX2I | RGATCY | 9 cut(s) | 478, 853, 1258, 1507, 1736, 1897, 1970, 3511, 6416 |
| BstYI | RGATCY | 9 cut(s) | 478, 853, 1258, 1507, 1736, 1897, 1970, 3511, 6416 |
| Bsu15I | ATCGAT | 1 cut(s) | 6438 |
| BsuI | GTATCC | 3 cut(s) | 3715, 5778, 6239 |
| BsuTUI | ATCGAT | 1 cut(s) | 6438 |
| BtgI | CCRYGG | 3 cut(s) | 497, 4737, 6364 |
| BtgZI | GCGATG | 1 cut(s) | 1455 |
| BtsI | GCAGTG | 5 cut(s) | 246, 1072, 3391, 4134, 6027 |
| CaiI | CAGNNNCTG | 6 cut(s) | 314, 2315, 2972, 4334, 4763, 5036 |
| CfoI | GCGC | 5 cut(s) | 279, 876, 3320, 3337, 5730 |
| Cfr10I | RCCGGY | 1 cut(s) | 47 |
| Cfr42I | CCGCGG | 1 cut(s) | 4740 |
| ClaI | ATCGAT | 1 cut(s) | 6438 |
| CseI | GACGC | 1 cut(s) | 6036 |
| CspCI | CAANNNNNGTGG | 8 cut(s) | 2274, 2309, 2634, 2669, 5315, 5338, 5350, 5373 |
| DraI | TTTAAA | 3 cut(s) | 834, 1129, 1399 |
| DraIII | CACNNNGTG | 2 cut(s) | 2438, 3251 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 866, 5394 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 866, 5394 |
| EaeI | YGGCCR | 1 cut(s) | 2076 |
| Eam1104I | CTCTTC | 5 cut(s) | 99, 843, 1909, 2707, 6242 |
| EarI | CTCTTC | 5 cut(s) | 99, 843, 1909, 2707, 6242 |
| EciI | GGCGGA | 1 cut(s) | 1074 |
| Eco130I | CCWWGG | 5 cut(s) | 1184, 1545, 2256, 3039, 6092 |
| Eco24I | GRGCYC | 2 cut(s) | 2949, 3787 |
| Eco31I | GGTCTC | 1 cut(s) | 1645 |
| Eco32I | GATATC | 3 cut(s) | 771, 841, 2938 |
| Eco47I | GGWCC | 6 cut(s) | 291, 1992, 4052, 4196, 5105, 5387 |
| Eco47III | AGCGCT | 1 cut(s) | 3319 |
| Eco88I | CYCGRG | 2 cut(s) | 1434, 3772 |
| Eco91I | GGTNACC | 3 cut(s) | 1429, 1462, 3262 |
| EcoO109I | RGGNCCY | 5 cut(s) | 485, 1992, 2945, 3934, 4052 |
| EcoO65I | GGTNACC | 3 cut(s) | 1429, 1462, 3262 |
| EcoRI | GAATTC | 2 cut(s) | 1552, 3691 |
| EcoRII | CCWGG | 9 cut(s) | 1053, 1893, 2635, 3011, 3779, 4055, 5543, 5988, 6238 |
| EcoRV | GATATC | 3 cut(s) | 771, 841, 2938 |
| EcoT14I | CCWWGG | 5 cut(s) | 1184, 1545, 2256, 3039, 6092 |
| EcoT22I | ATGCAT | 1 cut(s) | 5782 |
| EcoT38I | GRGCYC | 2 cut(s) | 2949, 3787 |
| ErhI | CCWWGG | 5 cut(s) | 1184, 1545, 2256, 3039, 6092 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 5414, 5446 |
| FaqI | GGGAC | 7 cut(s) | 1600, 2495, 3005, 3376, 3675, 4038, 5718 |
| FauI | CCCGC | 2 cut(s) | 2512, 5693 |
| FauNDI | CATATG | 1 cut(s) | 88 |
| FbaI | TGATCA | 3 cut(s) | 1150, 2380, 5323 |
| FblI | GTMKAC | 4 cut(s) | 3734, 3844, 4415, 6087 |
| FriOI | GRGCYC | 2 cut(s) | 2949, 3787 |
| FspI | TGCGCA | 2 cut(s) | 875, 3336 |
| GlaI | GCGC | 5 cut(s) | 278, 875, 3319, 3336, 5729 |
| GsaI | CCCAGC | 3 cut(s) | 2211, 2751, 3852 |
| GsuI | CTGGAG | 3 cut(s) | 57, 1794, 4230 |
| HaeII | RGCGCY | 1 cut(s) | 3321 |
| HapII | CCGG | 3 cut(s) | 48, 6320, 6464 |
| HgaI | GACGC | 1 cut(s) | 6036 |
| HhaI | GCGC | 5 cut(s) | 279, 876, 3320, 3337, 5730 |
| Hin6I | GCGC | 5 cut(s) | 277, 874, 3318, 3335, 5728 |
| HinP1I | GCGC | 5 cut(s) | 277, 874, 3318, 3335, 5728 |
| HincII | GTYRAC | 2 cut(s) | 3845, 4137 |
| HindII | GTYRAC | 2 cut(s) | 3845, 4137 |
| HindIII | AAGCTT | 5 cut(s) | 2781, 3636, 4548, 5889, 6161 |
| HpaII | CCGG | 3 cut(s) | 48, 6320, 6464 |
| HpyCH4IV | ACGT | 4 cut(s) | 2484, 3583, 4002, 4025 |
| HpySE526I | ACGT | 4 cut(s) | 2484, 3583, 4002, 4025 |
| HspAI | GCGC | 5 cut(s) | 277, 874, 3318, 3335, 5728 |
| KflI | GGGWCCC | 1 cut(s) | 4052 |
| Ksp22I | TGATCA | 3 cut(s) | 1150, 2380, 5323 |
| KspI | CCGCGG | 1 cut(s) | 4740 |
| LguI | GCTCTTC | 1 cut(s) | 99 |
| MaeII | ACGT | 4 cut(s) | 2484, 3583, 4002, 4025 |
| MfeI | CAATTG | 3 cut(s) | 1928, 2598, 4166 |
| MflI | RGATCY | 9 cut(s) | 478, 853, 1258, 1507, 1736, 1897, 1970, 3511, 6416 |
| MhlI | GDGCHC | 6 cut(s) | 1322, 2949, 3589, 3787, 3880, 4884 |
| MlsI | TGGCCA | 1 cut(s) | 2078 |
| MluNI | TGGCCA | 1 cut(s) | 2078 |
| MlyI | GAGTC | 8 cut(s) | 658, 968, 1832, 1949, 2693, 4132, 4388, 4558 |
| MmeI | TCCRAC | 5 cut(s) | 1597, 4517, 4641, 5179, 5743 |
| Mox20I | TGGCCA | 1 cut(s) | 2078 |
| Mph1103I | ATGCAT | 1 cut(s) | 5782 |
| MroXI | GAANNNNTTC | 1 cut(s) | 354 |
| MscI | TGGCCA | 1 cut(s) | 2078 |
| MslI | CAYNNNNRTG | 3 cut(s) | 2002, 3456, 3669 |
| Msp20I | TGGCCA | 1 cut(s) | 2078 |
| MspA1I | CMGCKG | 7 cut(s) | 1706, 3184, 4628, 4727, 4739, 4763, 4769 |
| MspI | CCGG | 3 cut(s) | 48, 6320, 6464 |
| MspR9I | CCNGG | 9 cut(s) | 1055, 1895, 2637, 3013, 3781, 4057, 5545, 5990, 6240 |
| MunI | CAATTG | 3 cut(s) | 1928, 2598, 4166 |
| Mva1269I | GAATGC | 9 cut(s) | 756, 1082, 1792, 2131, 2965, 3809, 4288, 4792, 4852 |
| MvaI | CCWGG | 9 cut(s) | 1055, 1895, 2637, 3013, 3781, 4057, 5545, 5990, 6240 |
| MvnI | CGCG | 1 cut(s) | 4739 |
| NdeI | CATATG | 1 cut(s) | 88 |
| NheI | GCTAGC | 1 cut(s) | 2012 |
| NmuCI | GTSAC | 8 cut(s) | 1067, 1307, 1462, 2222, 2395, 4634, 5283, 5812 |
| NsbI | TGCGCA | 2 cut(s) | 875, 3336 |
| NsiI | ATGCAT | 1 cut(s) | 5782 |
| NspI | RCATGY | 9 cut(s) | 1292, 1698, 1730, 1802, 2632, 3455, 3685, 4187, 5170 |
| NspV | TTCGAA | 1 cut(s) | 2099 |
| OliI | CACNNNNGTG | 1 cut(s) | 2002 |
| PasI | CCCWGGG | 1 cut(s) | 1054 |
| PciI | ACATGT | 4 cut(s) | 1288, 1694, 1726, 3451 |
| PciSI | GCTCTTC | 1 cut(s) | 99 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 4790 |
| PctI | GAATGC | 9 cut(s) | 756, 1082, 1792, 2131, 2965, 3809, 4288, 4792, 4852 |
| PdmI | GAANNNNTTC | 1 cut(s) | 354 |
| PflMI | CCANNNNNTGG | 4 cut(s) | 1583, 2006, 2840, 3045 |
| PfoI | TCCNGGA | 1 cut(s) | 3011 |
| PleI | GAGTC | 8 cut(s) | 657, 967, 1831, 1948, 2693, 4132, 4387, 4558 |
| PpsI | GAGTC | 8 cut(s) | 657, 967, 1831, 1948, 2693, 4132, 4387, 4558 |
| Ppu21I | YACGTR | 2 cut(s) | 3584, 4026 |
| PpuMI | RGGWCCY | 2 cut(s) | 1992, 4052 |
| PscI | ACATGT | 4 cut(s) | 1288, 1694, 1726, 3451 |
| PshBI | ATTAAT | 2 cut(s) | 2754, 6303 |
| Psp1406I | AACGTT | 1 cut(s) | 4002 |
| Psp5II | RGGWCCY | 2 cut(s) | 1992, 4052 |
| Psp6I | CCWGG | 9 cut(s) | 1053, 1893, 2635, 3011, 3779, 4055, 5543, 5988, 6238 |
| PspEI | GGTNACC | 3 cut(s) | 1429, 1462, 3262 |
| PspFI | CCCAGC | 3 cut(s) | 2207, 2747, 3848 |
| PspGI | CCWGG | 9 cut(s) | 1053, 1893, 2635, 3011, 3779, 4055, 5543, 5988, 6238 |
| PspOMI | GGGCCC | 1 cut(s) | 2945 |
| PspPPI | RGGWCCY | 2 cut(s) | 1992, 4052 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2478, 2510 |
| PstI | CTGCAG | 9 cut(s) | 253, 4084, 4216, 4627, 4726, 4768, 4975, 5631, 6022 |
| PstNI | CAGNNNCTG | 6 cut(s) | 314, 2315, 2972, 4334, 4763, 5036 |
| PsuI | RGATCY | 9 cut(s) | 478, 853, 1258, 1507, 1736, 1897, 1970, 3511, 6416 |
| PvuII | CAGCTG | 6 cut(s) | 1706, 3184, 4628, 4727, 4763, 4769 |
| RseI | CAYNNNNRTG | 3 cut(s) | 2002, 3456, 3669 |
| SacII | CCGCGG | 1 cut(s) | 4740 |
| SalI | GTCGAC | 1 cut(s) | 3843 |
| SapI | GCTCTTC | 1 cut(s) | 99 |
| ScaI | AGTACT | 2 cut(s) | 61, 4096 |
| SchI | GAGTC | 8 cut(s) | 658, 968, 1832, 1949, 2693, 4132, 4388, 4558 |
| ScrFI | CCNGG | 9 cut(s) | 1055, 1895, 2637, 3013, 3781, 4057, 5545, 5990, 6240 |
| SduI | GDGCHC | 6 cut(s) | 1322, 2949, 3589, 3787, 3880, 4884 |
| Sfr303I | CCGCGG | 1 cut(s) | 4740 |
| SfuI | TTCGAA | 1 cut(s) | 2099 |
| SgrBI | CCGCGG | 1 cut(s) | 4740 |
| SinI | GGWCC | 6 cut(s) | 291, 1992, 4052, 4196, 5105, 5387 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 2002, 3456, 3669 |
| SmlI | CTYRAG | 5 cut(s) | 885, 4086, 5130, 5972, 6348 |
| SmoI | CTYRAG | 5 cut(s) | 885, 4086, 5130, 5972, 6348 |
| SpeI | ACTAGT | 2 cut(s) | 3226, 4223 |
| SspI | AATATT | 3 cut(s) | 591, 784, 2043 |
| StyD4I | CCNGG | 9 cut(s) | 1053, 1893, 2635, 3011, 3779, 4055, 5543, 5988, 6238 |
| StyI | CCWWGG | 5 cut(s) | 1184, 1545, 2256, 3039, 6092 |
| TaiI | ACGT | 4 cut(s) | 2487, 3586, 4005, 4028 |
| TatI | WGTACW | 5 cut(s) | 59, 1723, 1922, 4094, 4118 |
| TauI | GCSGC | 3 cut(s) | 2635, 4739, 4742 |
| TseFI | GTSAC | 8 cut(s) | 1067, 1307, 1462, 2222, 2395, 4634, 5283, 5812 |
| Tsp45I | GTSAC | 8 cut(s) | 1067, 1307, 1462, 2222, 2395, 4634, 5283, 5812 |
| TspGWI | ACGGA | 5 cut(s) | 674, 876, 1872, 3289, 5727 |
| Van91I | CCANNNNNTGG | 4 cut(s) | 1583, 2006, 2840, 3045 |
| VpaK11BI | GGWCC | 6 cut(s) | 291, 1992, 4052, 4196, 5105, 5387 |
| VspI | ATTAAT | 2 cut(s) | 2754, 6303 |
| XbaI | TCTAGA | 2 cut(s) | 718, 4946 |
| XceI | RCATGY | 9 cut(s) | 1292, 1698, 1730, 1802, 2632, 3455, 3685, 4187, 5170 |
| XcmI | CCANNNNNNNNNTGG | 4 cut(s) | 1580, 2086, 3401, 5115 |
| XmaJI | CCTAGG | 1 cut(s) | 1184 |
| XmiI | GTMKAC | 4 cut(s) | 3734, 3844, 4415, 6087 |
| XmnI | GAANNNNTTC | 1 cut(s) | 354 |
| ZrmI | AGTACT | 2 cut(s) | 61, 4096 |
| Zsp2I | ATGCAT | 1 cut(s) | 5782 |