Rh7AG206400

Agenet domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0002656
Physical Location & Seq
Reverse (-)
18875486 .. 18887434
11949 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG206400.1

Sequence Viewer

Length: 6954 bp
ATGGAGTATGATGACAATGATTTTCAAAGCCAGAATCTTCAATTAGCTGGTGAAGGGAGCACCAATTGTCCTCCAGTTTTACAGCCATATGGTCTTCCCAAATTTGATTTTGATGACAGCCTTCAGGGGCATTTGAGGTTTGATAGTTTGGTTGAAACTGAGGTTTTTCTTGGCATTGAGAGTAGCGAAGCTAACAACTGGATTGAGGATTTCTCTCGTGGGAGTAGTGGGATAGAGTTTAGTTCAAGTGCAGTAGAATCGTGCTCTATATCAAGGCGGAACAATGTTTGGTCTGAGGCCACGTCCTCAGAATCTGTTGAAATGCTATTAAAATCTGTTGGGCAGGAAGAAATAATTCCCGCTCAGACTATCTTGGAAGAATCAGATGCCTGTAAGGAAGTGGGTTGCATAAAACAGATGGAGACTAATTTGAAGAATGATGATAACATTCTCACTGAAACAGGGGATGTTAGAGATCTACATTCTACTTTACTGCTAGATGAAACTGCCGGAAACCTTTCTGGCTTAGATAATGTTGGAGATCAGCCTCGGCTTGAGGATGCTTCACAAACTCAGGAAGTTGAATTACCGGTTGATGGAAATTCAAGTGTTTTGGATCCAAATTCTGTCAGTGATCGGGATAGGCTGCCTGTAACTACAGGGAGCCTGACTGATGATAAAGGCAAGGATGTGAATAATATGGAATTTGATAATTTAGTTGATTATCCTCCAGATAAAAAAATGCATGAAAATTCATCTGCTTCAGAGATGCAAGTTGATAATATGATGACTTCTGTGCGAAGTATTATTACAAGCAGTGATGAGTTGAATAATCAAGATGTTCCACATCATATAGTGGATATTACTGAAGAGAATCCAGGCAGTCATGATGTGGCAAGCATAGATATTCAATGTAGGAATGATTTGGACAAACCTCATTGTTTAGCTTCAGAGGTGGAGTCTGGAAAAAAGGAAATTGCAAATGAAGATACTGTTATTGATGTGCAGGAAGCGTCTAAAATTATGCTGCAAGGGGATTCTATTTTACATACAATGGGTGGATGCAGTGATAAGGAATGTCCTGGAGTTCTTACTGAGACCAATAAATGTGAAGATCTGGTAGTGTCTAAGGACCCTGATGTTGGTGGTGATCAATCCACAATGACCTACACAAATGATGCTGGGTATGGAATTGAGGTTAGGAACAACCTTGGCGAAATTTCTTCCAGTCTAGATCCTATTCTGAAAGGGGAATCTGATTTACAGACAGTGGACAGATGCACTGACAGGGAATGCCCTGAAGTTCTTGATGACACCAACAAATGTGAAGATGTTGTTATCTCTTTTAAAAACACAGATACTGGTGGTGTTCCAGCTAAGTCTGACAAAAATGACAGTGGTTATGGCACTGAGGATCAGAACAGCAATACTGGAGTTTTGTCTGGTCTAGATCCTACCCTCAAAGGGGATTCTAACTTGTGTACAATGGATGTATGTACTGTCAAGGAATCCCCTGAAGTTCCTTCTGTCTCGTTGAAAGCTACAGACACTGGTGGTGATCAATCTAAATTACACACACCTGACTTATCACCAAATGGGAATGACACTGGGCATGCAGTTGAACTTGGCAACAGTGTTTCTGCCTGTGCAAGCCCTACCTTGAGGACGGATAATGATTTACATACAGTGGATGCAAGTAGTGACAGGAAATGCCTTGATGTTCATGTGGAGACCACTAAATGTGAAGACATAGTGTTGTCCAAAGGCACAGATACTACCGGTGATCAATCTAACATAAGCCCACATGTTTTATCACCTGTAGCCTACAAAAGTGATACTGTGTATGCAGATGAGGTCGGGAACAGCAATTCTGGATTTTCGTCCAGTCTAGACTCTAGATTGAAGGTGAATTCTGGAAAGAGCACCGAGGAGGATGCATTAAAAAGTGGTGGCCAACCCATTGATAGTGAGATTTTGGTCAGAAAGTCTGAGGCTTCTATGGCAGTCATTGAGGAAACTGAGGTTTTCAAAGGCAGAGGTGATGAGAATCCGGAAGTTCATTCTAATTTGACTCCAACATGCTCTTCAGCCGAAATGCCTAGTGAAGTGCATGTGACTGGAGCTTCTAAAAGTCTCCATGATGCTTTTGGAGTTTCTGCTGAGGAATTAAATGAAGAAAGCCATGTGTCACCTTCTAATCTGAAGGAGTCTACAGAAAGGTGTTCTGAAAATGAAGTTTGCAAAGAAGGTATATCTGGTAAATGTGACCAGGATCTCTCTTACAGTGAAAAGGATACTACAAATTTACCTGTTGAATCTAATAGTATGGATTTGGAGTTTGTTGGATCTGCTGGTAAGGGAGATGAGTCCTCATCTTTGTGTGAAGATTCTGCAGAAAAAGAGTTGATTGTTCCAACACTAAAACATGATGTTGATGGCAATGCATCAGTGGCTGATGTTCCCTTGGAAAGTTGTGATCTGGCTTCTTGCGGCACAAGGGATGTTGTTCCCTTGTCTTCTGAGAATGGTGCAACCACACATATTCATAACGTATCAGTGGTTCCTGCAGCACCTTCTCCTGCTATGGGATCACACTCGGACAATAAAGGAGAAACTGCAATCGAAATATCCAAAGATACAAGTGTATCAGGTACAGTGTCATCACCCATGGTAGAATCTGGACCAGGCCCTGTTTGTGAAGCTGAAAAAGGTGCTTCTTGTGATACTGCTGGACAACTGTTATGCAATACGCTTGATCAGTCTCTGCCAATTTCAGTTAGTTGCAATACTGAAAACCAAAGTGAACCTGGAACAGCAGTTGCTATTGAAATTAGCAAGAGAAGCACAACGGATATGGAAGTAAAACGAGGTGATGATGCTGAAGCTCAAGATGGAGCAACAACAGAAAACAAATCTACCACAGAAGACAAATCTGAAAAGGCATCAGCGAATGTAACAGGTGATGCTTTTGGAAATTTTGAAGGTCCAATGCTTTCTACTTGTTCGCCCGAATCTTGTTCTAAGTCTGCTGATCCCTACCAGCCTGGTTGTGATTCTCCCAAAGTTTTTGGAACAACTGAGATTCCTGAGACTAAACATGAAAAAGGCAATATCAAGGAGTCGACAAATCAGAATGCCGCAGATACTAACGTAGTTGGGGATGGCGGCAAACATTCTTCTAATTCCTCGAATCCAACTGGAAATGATGTCCCCAAAGATCAGGGATATGGCACCTCAGATATCACTTCCTTTGCAGATTTGCCTATAGGGGTTGCTGCCAACAGCTTGCAGCCGTTTCCTGCTATTTCAGCTCCCAAAATTGTAGATGGGTCTCAAACAAATTCTGCCTCAGGCCAGATGGATGCAAAGATCTCGCAAGAAATTTCTCGTGGAGGTGATGGAGAGATTGCTGGTGGTGGTTCTAAAGGTACCACAGAACGGAAAAGAAGGCGAGCATCTAGTAAGGGAACAGGTAAAGAGAGTGCTAAGAAGGGAACTGTGAAAGCGACAACTCCTATGAGACAAGCAGACAGAGGAGACAAATCTAGCAGTGTGCCCCTGGGGAAATCTGGAATTTTTCAGTTTGCGCATCCAAGTGACATACAGTACTTCGGGCTTGTGGATGGTAGCTCAAAAACTTATTCAGTTCTTACTAGTGCAACATCTAGTCTGCCAGATCTGAATTCTTCTGCTCCAGCATCTCTAGTATTTCAGCAGCCTTTCACCGATCTGCAGCAAGTGCAATTACGTGCTCAGATCTTTGTTTATGGAGCTTTGATTCAAGGAACAGCACCTGATGAAGCTTATATGGTGTCGGCATATGGAGGACCTGATGGTGGAAGGAGTATCTGGGAGAATGCGTGGCGTAAGTGCATAGAGAGGCTACACAGTCAAAAATCTACCCCTATTAATCCAGAAACCCTTTTGCAGTCATCCTCTGACCTGAGATTTACAGGTGGTAGGGTTCCTGATCAAGCTGGTAAACAAAGTGCATTCCAGGGTAAAGTTATCTCCTCACCTGCTGGTCGAGCCAGCACAAAGGGTATTCCACCTACTGCGAGTCCCATGATACCAATTTCATCACCGCTTTGGAGCATTCCTACCCCTGCTTGTGAGGCCCCTCAATATAGTGTTCTGCCGAGAGGTTCGGTAATGGATTATCAGCAGGCCCATACTCCATTGCATCCTTTCCAAACATCACCCATAAGGAACATTGTTGGACAAAATTCCTCGTGGATGTCTCAGTCCCCGTTTCGGGGTCCCTGGGTTCCTTCTCCACAGTCATCTGCAGCTGAAACCAGTATTCGTTTCTCAGCATTTCCTAGTACAGAGTCAGTGCTGCTGACTCCTGTAAAAGAAACAACTTCATCACAAGTATCCAGTATAAAGCATGCCTCCTCGGTTGTTACTGGTCAAACTGGGGCTACAACCAGTGTTTTTGCAGGGGTTTCTCCACTGCTTGACTCAAAGAAAGTGGGAGTAGCATCACCTGGCGAGCCTTCATCTCAACCTAAGTCTAGAAAAAGAAAAAAGATCTCAGATTCTAAGGAACTTGGTCCGATTAGTTTGCAGCCTCAATCTGAACCTGAGTCAGCTATAACCCTGGCTGTTACTAGTAGTGTATCTACATCTGTTGTAGTCACCGCCCCAAGTACCTTTGTGTCTAAGGCCATGCCAGAAAAATTGGCTATGTCGGTATCCTCCGATCACCTCAAGAAAGCAGATCTTGGTTTGGAGCAGAGGGCAACTTTATCAAAAGAGACTCTTAGTAAAGCTAAGGAGGCTAGGCAACAAGCAGAGGAAGCTTCTGCTCATGCTGCTGCAGCTGTTGGTCACAGTCAAGAAATATGGAGTCAGTTGGATAAGCAGAAACATTCCGGATTGACATCAGATGCCGAAGCCAAATTAGCTTCTGCTGCTGTTGCTGTAGCTGCCGCCGCTGCTGTTGCAAAAGCAGCAGCTGCAGCTGCCAATGTTGCGGCAAATGCTGCATTGCAAGCAGTACTGATGGCTGAGGAAGCCTATGGGAATCAAAGTGAAAGTATGGTAGATTTGAGTACTGATGGAGTGAATGCATTGGGATTGGCTGCTCCAGGATCTGTTTTTAGGGCTGAGGATGGAACAAACAGTTCAAGTTCAATCCTTTTTGCTGCTAGAGAGGCTGCTAGAAGGAGGGTTGAAGCTGCATCTGCAGCCTCAAAGCGAGCTGAAAATATGGACGCCATAGTAAAAGCTGCTGAGCTAGCCGCAGAAGCTGTATCACAAGCTGGAACAGTTGTTGCTATGGGTGATCCTGTGCCTTTGAGCGACTTGGTAAAAGCTGGTCCTGAGGGTTATTGGAAAGCACCCCAAGTATCTTCAGAGACTGTTAAGAAATCAAATGATGGAATGAGGGAACAATCAAATTTTTCCACTGTTGGAGAAGATTCAGATAAGGAAGAAACACTGATCACTGCCACTAAGAAATCGCCTACAGTCGGTGAAAGGGTTACTGAGATTATAAAGTCTGCTTTGCCCACTGCTGGGAATGATCTTGGAAAAACTGCAGAAGCGTCCAAAGATAGCTGCATCGTTGAGGGTTCTCAAGTAGAGGTTTTCAAAGAAGGGGGTGGATTTGCAGTGGGCTGGTTCACAGCTACTGTATTGAGTTTGCAGGACGGCAAAGCATGTGTATGTTACACTGAGCTTCAGTCAGACGAAGGCTCAGGGAAACTACAGGAATGGGTGGCACTTGACAGCAAAGACGATAAGCCACCAAAAATACGTGTTGCTCGCCTTCTTACCCCCTCCCTTGAAGGAACAAGGAAAAGGCGGAGAGAAGCAATGGCAGATTACGCTTGGTCTGTTGGAGACAAAGTTGATGCCTGGATACAAAACAGCTGGTGGGAAGGTGTTGTGACTGAAAAAAACAAGAAAGATGAAACTATACTAAAAGTCCACTTTCCAGCTCAAGGGGAAACATCACATGTTAAAGCTTGGCATCTTCGGCCTTCTCTGATTTGGAAGGATGGGGAATGGGTTGAATGGTCCAGTGTGCGGAATGACGGCTCTTCCATGGAGGATGGCTTGCCGCAGGAAAAGCGAATCAAATTGGGCAGTTCTACAGTGGAAGGAAAAGGGAAGGATAAGACTTTAAAAAGCAATGTTCTTGATGCAGGAAAACCTGAAGAGCCAAGTTTGCTGAATTTGTCTGCAAATGAAAAGGTATTTAATATAGGTAAAAATACCAGGATTGAGAATAAGCTTGATGGAGCCAGAACAAATCGGACAGGGTTGCAGAAGGAAGGATCAGTAAAATTTGGTATTCCGAAGCCCAAAAGAAAATTTATGGAAGTTAGCAAGCATTATGTGGCCAATCAGACTAGTAAGGTTAACGAGTCTAATGATTCTGTGAAATTTGCGAAATATTTGATGCCACAATCATCAGGTTTCCGTGCATTGAAAAATACATCTAAATTTGATACAAAGGACAAAGAGGGGGCCGATAACAAGCTAAGGGGTTTTAGATCTGAAAAGCAGCGGAGTATGTCGGATAAAACAGTTCCTCAGAAGGACAACTTTTCAATAGATTTAGTTTCTGCTGCGGATGGCTCCAGTAAGATGGACCATACAAGAAAGGTCAAAGACTCTGTAAGACAAGCTGAGGGTTTATCTGGCAAGCGCAACATATTTGAGACGGGATCAGGTTATAGCTCAGATGGAAGAGCACAGGGCGCAGCCATGTTCTCTTCACGAACTCCGTCGTCAGATTTACCTCCATCCAAGAAGGTAGCCACTACAACTGCTAAATCCGAACGGGGAAATAAAGGAAATTTTGCACCAGTTGTTGGAAAGTTGGGTAAAATTGAGGAGGGCAAAGGTACAAGTAGTAATCCTGTAAGGTCAACTGCAGAAGTAGTCGAGCCTCGTAGATCAAATCGCAGAATTCAGCCAACATCAAGAGTAAGTATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Agenet

Protein Analysis

2317

Amino Acids

246.16

Weight (kDa)

4.91

Isoelectric Point (pI)

48.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Agenet PF05641 1860 - 1912 1.4e-10 Agenet domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 5501
AarI CACCTGC 1 cut(s) 4027
Acc16I TGCGCA 1 cut(s) 3588
Acc36I ACCTGC 1 cut(s) 4027
Acc65I GGTACC 1 cut(s) 3428
AccB1I GGYRCC 2 cut(s) 3230, 3428
AccB7I CCANNNNNTGG 1 cut(s) 6827
AccBSI CCGCTC 1 cut(s) 362
AccI GTMKAC 2 cut(s) 2210, 3122
AccIII TCCGGA 2 cut(s) 2050, 4877
AcoI YGGCCR 2 cut(s) 1951, 6351
AcyI GRCGYC 1 cut(s) 5220
AflIII ACRYGT 3 cut(s) 1804, 5764, 5965
AgeI ACCGGT 2 cut(s) 589, 1778
AhlI ACTAGT 3 cut(s) 3653, 4613, 6362
AjiI CACGTC 1 cut(s) 303
AjuI GAANNNNNNNTTGG 2 cut(s) 2068, 2100
Alw21I GWGCWC 5 cut(s) 62, 266, 1925, 3754, 6709
Aor13HI TCCGGA 2 cut(s) 2050, 4877
AseI ATTAAT 1 cut(s) 3909
AsiGI ACCGGT 2 cut(s) 589, 1778
Asp700I GAANNNNTTC 2 cut(s) 354, 517
Asp718I GGTACC 1 cut(s) 3428
AspLEI GCGC 3 cut(s) 3589, 6663, 6716
AsuNHI GCTAGC 1 cut(s) 5242
AvaII GGWCC 9 cut(s) 1132, 2681, 2984, 3827, 4259, 4556, 5324, 6027, 6604
AxyI CCTNAGG 2 cut(s) 3349, 5328
BaeGI GKGCMC 1 cut(s) 3558
BaeI ACNNNNGTAYC 6 cut(s) 2628, 2628, 2661, 2661, 3135, 3168
BalI TGGCCA 2 cut(s) 1953, 6353
BamHI GGATCC 1 cut(s) 616
BanI GGYRCC 2 cut(s) 3230, 3428
BarI GAAGNNNNNNTAC 4 cut(s) 570, 602, 793, 825
BauI CACGAG 3 cut(s) 216, 3387, 4231
BbsI GAAGAC 4 cut(s) 86, 1752, 2508, 2931
Bbv12I GWGCWC 5 cut(s) 62, 266, 1925, 3754, 6709
BbvCI CCTCAGC 4 cut(s) 2160, 5013, 5112, 6642
BceAI ACGGC 3 cut(s) 3277, 5674, 6061
BcgI CGANNNNNNTGC 8 cut(s) 240, 274, 1916, 1950, 3354, 3388, 4549, 4583
BciVI GTATCC 4 cut(s) 2287, 4387, 4708, 5862
BclI TGATCA 6 cut(s) 1150, 1558, 1783, 2755, 3970, 5448
BcuI ACTAGT 3 cut(s) 3653, 4613, 6362
BfuAI ACCTGC 1 cut(s) 4027
BfuI GTATCC 4 cut(s) 2287, 4387, 4708, 5862
BglII AGATCT 8 cut(s) 475, 1114, 3369, 3676, 3756, 4533, 4723, 6506
BlpI GCTNAGC 1 cut(s) 5238
BmcAI AGTACT 3 cut(s) 3608, 5004, 5059
Bme18I GGWCC 9 cut(s) 1132, 2681, 2984, 3827, 4259, 4556, 5324, 6027, 6604
BmgBI CACGTC 1 cut(s) 303
BmrI ACTGGG 2 cut(s) 1617, 4428
BmtI GCTAGC 1 cut(s) 5246
BmuI ACTGGG 2 cut(s) 1617, 4428
BpiI GAAGAC 4 cut(s) 86, 1752, 2508, 2931
BplI GAGNNNNNCTC 2 cut(s) 197, 229
BpmI CTGGAG 8 cut(s) 57, 714, 1104, 1452, 2139, 3678, 5076, 6577
Bpu10I CCTNAGC 7 cut(s) 2160, 4776, 5013, 5112, 5704, 6494, 6642
Bpu1102I GCTNAGC 1 cut(s) 5238
BpuEI CTTGAG 6 cut(s) 575, 1681, 2871, 4697, 5568, 5934
BsaAI YACGTR 2 cut(s) 3749, 5765
BsaBI GATNNNNATC 2 cut(s) 2046, 4885
BsaHI GRCGYC 1 cut(s) 5220
BsaI GGTCTC 3 cut(s) 1091, 1724, 3336
BsaWI WCCGGW 4 cut(s) 589, 1778, 2050, 4877
BsaXI ACNNNNNCTCC 4 cut(s) 3845, 3875, 5841, 5871
Bse118I RCCGGY 2 cut(s) 589, 1778
Bse21I CCTNAGG 2 cut(s) 3349, 5328
Bse3DI GCAATG 5 cut(s) 2446, 4178, 4991, 5829, 6148
Bse8I GATNNNNATC 2 cut(s) 2046, 4885
BseAI TCCGGA 2 cut(s) 2050, 4877
BseJI GATNNNNATC 2 cut(s) 2046, 4885
BseMI GCAATG 5 cut(s) 2446, 4178, 4991, 5829, 6148
BseRI GAGGAG 5 cut(s) 1943, 3549, 4003, 4387, 6863
BseSI GKGCMC 1 cut(s) 3558
BseYI CCCAGC 2 cut(s) 1181, 5522
BsgI GTGCAG 2 cut(s) 270, 1025
BshNI GGYRCC 2 cut(s) 3230, 3428
BshTI ACCGGT 2 cut(s) 589, 1778
BsiHKAI GWGCWC 5 cut(s) 62, 266, 1925, 3754, 6709
BsiSI CCGG 5 cut(s) 510, 590, 1779, 2051, 4878
BslFI GGGAC 4 cut(s) 3194, 4047, 4231, 4245
BsmBI CGTCTC 1 cut(s) 6668
BsmFI GGGAC 4 cut(s) 3194, 4047, 4231, 4245
BsmI GAATGC 6 cut(s) 1298, 3139, 3862, 3992, 4095, 5077
Bso31I GGTCTC 3 cut(s) 1091, 1724, 3336
Bsp1286I GDGCHC 6 cut(s) 62, 266, 1925, 3558, 3754, 6709
Bsp13I TCCGGA 2 cut(s) 2050, 4877
Bsp1407I TGTACA 1 cut(s) 1481
Bsp1720I GCTNAGC 1 cut(s) 5238
Bsp19I CCATGG 2 cut(s) 2667, 6054
BspEI TCCGGA 2 cut(s) 2050, 4877
BspHI TCATGA 1 cut(s) 886
BspMAI CTGCAG 9 cut(s) 2395, 2569, 3735, 4291, 4825, 4966, 5194, 5548, 6892
BspMI ACCTGC 1 cut(s) 4027
BspOI GCTAGC 1 cut(s) 5246
BspQI GCTCTTC 4 cut(s) 2089, 6055, 6162, 6697
BspT107I GGYRCC 2 cut(s) 3230, 3428
BspTNI GGTCTC 3 cut(s) 1091, 1724, 3336
BsrBI CCGCTC 1 cut(s) 362
BsrDI GCAATG 5 cut(s) 2446, 4178, 4991, 5829, 6148
BsrFI RCCGGY 2 cut(s) 589, 1778
BsrGI TGTACA 1 cut(s) 1481
BssAI RCCGGY 2 cut(s) 589, 1778
BssNI GRCGYC 1 cut(s) 5220
BssSI CACGAG 3 cut(s) 216, 3387, 4231
BssT1I CCWWGG 4 cut(s) 1210, 2463, 2667, 6054
Bst2BI CACGAG 3 cut(s) 216, 3387, 4231
Bst6I CTCTTC 6 cut(s) 864, 2089, 6055, 6162, 6697, 6733
BstACI GRCGYC 1 cut(s) 5220
BstAPI GCANNNNNTGC 3 cut(s) 3739, 4961, 4988
BstAUI TGTACA 1 cut(s) 1481
BstBAI YACGTR 2 cut(s) 3749, 5765
BstDSI CCRYGG 2 cut(s) 2667, 6054
BstHHI GCGC 3 cut(s) 3589, 6663, 6716
BstNSI RCATGY 7 cut(s) 1616, 1808, 2082, 2114, 4394, 5670, 5969
BstSLI GKGCMC 1 cut(s) 3558
BstV2I GAAGAC 4 cut(s) 86, 1752, 2508, 2931
BstXI CCANNNNNNTGG 1 cut(s) 6601
Bsu36I CCTNAGG 2 cut(s) 3349, 5328
BsuI GTATCC 4 cut(s) 2287, 4387, 4708, 5862
BtgI CCRYGG 2 cut(s) 2667, 6054
BtrI CACGTC 1 cut(s) 303
BtsI GCAGTG 7 cut(s) 823, 1072, 3556, 4454, 5451, 5517, 5625
BveI ACCTGC 1 cut(s) 4027
CciI TCATGA 1 cut(s) 886
CfoI GCGC 3 cut(s) 3589, 6663, 6716
Cfr10I RCCGGY 2 cut(s) 589, 1778
CseI GACGC 3 cut(s) 1002, 5228, 5541
CspAI ACCGGT 2 cut(s) 589, 1778
CspCI CAANNNNNGTGG 2 cut(s) 4455, 4490
DraI TTTAAA 2 cut(s) 1348, 6135
EaeI YGGCCR 2 cut(s) 1951, 6351
Eam1104I CTCTTC 6 cut(s) 864, 2089, 6055, 6162, 6697, 6733
EarI CTCTTC 6 cut(s) 864, 2089, 6055, 6162, 6697, 6733
EciI GGCGGA 2 cut(s) 292, 5827
Eco130I CCWWGG 4 cut(s) 1210, 2463, 2667, 6054
Eco31I GGTCTC 3 cut(s) 1091, 1724, 3336
Eco32I GATATC 1 cut(s) 3241
Eco47I GGWCC 9 cut(s) 1132, 2681, 2984, 3827, 4259, 4556, 5324, 6027, 6604
Eco81I CCTNAGG 2 cut(s) 3349, 5328
EcoO109I RGGNCCY 5 cut(s) 1132, 2687, 3827, 4117, 4259
EcoRI GAATTC 3 cut(s) 1909, 3682, 6924
EcoRV GATATC 1 cut(s) 3241
EcoT14I CCWWGG 4 cut(s) 1210, 2463, 2667, 6054
EcoT22I ATGCAT 4 cut(s) 747, 1939, 2446, 5077
ErhI CCWWGG 4 cut(s) 1210, 2463, 2667, 6054
Esp3I CGTCTC 1 cut(s) 6668
FalI AAGNNNNNCTT 6 cut(s) 4710, 4742, 4749, 4781, 6542, 6574
FaqI GGGAC 4 cut(s) 3194, 4047, 4231, 4245
FauI CCCGC 1 cut(s) 367
FauNDI CATATG 2 cut(s) 88, 3820
FbaI TGATCA 6 cut(s) 1150, 1558, 1783, 2755, 3970, 5448
FblI GTMKAC 2 cut(s) 2210, 3122
FspI TGCGCA 1 cut(s) 3588
GlaI GCGC 3 cut(s) 3588, 6662, 6715
GsaI CCCAGC 2 cut(s) 1185, 5526
GsuI CTGGAG 8 cut(s) 57, 714, 1104, 1452, 2139, 3678, 5076, 6577
HapII CCGG 5 cut(s) 510, 590, 1779, 2051, 4878
HgaI GACGC 3 cut(s) 1002, 5228, 5541
HhaI GCGC 3 cut(s) 3589, 6663, 6716
Hin1I GRCGYC 1 cut(s) 5220
Hin6I GCGC 3 cut(s) 3587, 6661, 6714
HinP1I GCGC 3 cut(s) 3587, 6661, 6714
HincII GTYRAC 3 cut(s) 3123, 6373, 6885
HindII GTYRAC 3 cut(s) 3123, 6373, 6885
HindIII AAGCTT 4 cut(s) 3801, 4803, 5973, 6242
HpaI GTTAAC 1 cut(s) 6373
HpaII CCGG 5 cut(s) 510, 590, 1779, 2051, 4878
Hpy99I CGWCG 1 cut(s) 6745
HpyCH4IV ACGT 5 cut(s) 302, 2550, 3150, 3748, 5764
HpySE526I ACGT 5 cut(s) 302, 2550, 3150, 3748, 5764
Hsp92I GRCGYC 1 cut(s) 5220
HspAI GCGC 3 cut(s) 3587, 6661, 6714
KflI GGGWCCC 1 cut(s) 4259
Kpn2I TCCGGA 2 cut(s) 2050, 4877
KpnI GGTACC 1 cut(s) 3432
Ksp22I TGATCA 6 cut(s) 1150, 1558, 1783, 2755, 3970, 5448
KspAI GTTAAC 1 cut(s) 6373
LguI GCTCTTC 4 cut(s) 2089, 6055, 6162, 6697
MaeII ACGT 5 cut(s) 302, 2550, 3150, 3748, 5764
MbiI CCGCTC 1 cut(s) 362
MfeI CAATTG 1 cut(s) 64
MhlI GDGCHC 6 cut(s) 62, 266, 1925, 3558, 3754, 6709
MlsI TGGCCA 2 cut(s) 1953, 6353
MluNI TGGCCA 2 cut(s) 1953, 6353
Mox20I TGGCCA 2 cut(s) 1953, 6353
Mph1103I ATGCAT 4 cut(s) 747, 1939, 2446, 5077
MroI TCCGGA 2 cut(s) 2050, 4877
MroXI GAANNNNTTC 2 cut(s) 354, 517
MscI TGGCCA 2 cut(s) 1953, 6353
MslI CAYNNNNRTG 3 cut(s) 2377, 3594, 5671
Msp20I TGGCCA 2 cut(s) 1953, 6353
MspA1I CMGCKG 7 cut(s) 4292, 4826, 4940, 4961, 4967, 5880, 6520
MspI CCGG 5 cut(s) 510, 590, 1779, 2051, 4878
MunI CAATTG 1 cut(s) 64
Mva1269I GAATGC 6 cut(s) 1298, 3139, 3862, 3992, 4095, 5077
NcoI CCATGG 2 cut(s) 2667, 6054
NdeI CATATG 2 cut(s) 88, 3820
NheI GCTAGC 1 cut(s) 5242
NmeAIII GCCGAG 2 cut(s) 529, 4164
NmuCI GTSAC 8 cut(s) 1700, 2113, 2187, 2264, 3596, 4639, 4832, 5896
NsbI TGCGCA 1 cut(s) 3588
NsiI ATGCAT 4 cut(s) 747, 1939, 2446, 5077
NspI RCATGY 7 cut(s) 1616, 1808, 2082, 2114, 4394, 5670, 5969
PaeI GCATGC 2 cut(s) 1616, 4394
PagI TCATGA 1 cut(s) 886
PaqCI CACCTGC 1 cut(s) 4027
PasI CCCWGGG 2 cut(s) 3559, 4263
PciI ACATGT 2 cut(s) 1804, 5965
PciSI GCTCTTC 4 cut(s) 2089, 6055, 6162, 6697
PctI GAATGC 6 cut(s) 1298, 3139, 3862, 3992, 4095, 5077
PdmI GAANNNNTTC 2 cut(s) 354, 517
PflMI CCANNNNNTGG 1 cut(s) 6827
PfoI TCCNGGA 2 cut(s) 1081, 5092
PinAI ACCGGT 2 cut(s) 589, 1778
Ppu21I YACGTR 2 cut(s) 3749, 5765
PpuMI RGGWCCY 3 cut(s) 1132, 3827, 4259
PscI ACATGT 2 cut(s) 1804, 5965
PshBI ATTAAT 1 cut(s) 3909
PsiI TTATAA 1 cut(s) 5501
Psp5II RGGWCCY 3 cut(s) 1132, 3827, 4259
PspFI CCCAGC 2 cut(s) 1181, 5522
PspPPI RGGWCCY 3 cut(s) 1132, 3827, 4259
PsrI GAACNNNNNNTAC 2 cut(s) 2544, 2576
PstI CTGCAG 9 cut(s) 2395, 2569, 3735, 4291, 4825, 4966, 5194, 5548, 6892
PvuII CAGCTG 5 cut(s) 4292, 4826, 4961, 4967, 5880
RseI CAYNNNNRTG 3 cut(s) 2377, 3594, 5671
SalI GTCGAC 1 cut(s) 3121
SapI GCTCTTC 4 cut(s) 2089, 6055, 6162, 6697
ScaI AGTACT 3 cut(s) 3608, 5004, 5059
SduI GDGCHC 6 cut(s) 62, 266, 1925, 3558, 3754, 6709
SinI GGWCC 9 cut(s) 1132, 2681, 2984, 3827, 4259, 4556, 5324, 6027, 6604
SmiMI CAYNNNNRTG 3 cut(s) 2377, 3594, 5671
SmlI CTYRAG 6 cut(s) 554, 1660, 2886, 4712, 5583, 5949
SmoI CTYRAG 6 cut(s) 554, 1660, 2886, 4712, 5583, 5949
SpeI ACTAGT 3 cut(s) 3653, 4613, 6362
SphI GCATGC 2 cut(s) 1616, 4394
SspI AATATT 1 cut(s) 6407
StyI CCWWGG 4 cut(s) 1210, 2463, 2667, 6054
TaiI ACGT 5 cut(s) 305, 2553, 3153, 3751, 5767
TaqI TCGA 5 cut(s) 2622, 3122, 3188, 4027, 6900
TatI WGTACW 6 cut(s) 1481, 1496, 3606, 4325, 5002, 5057
TauI GCSGC 8 cut(s) 2493, 3140, 3168, 4937, 4940, 4982, 5249, 6073
TseFI GTSAC 8 cut(s) 1700, 2113, 2187, 2264, 3596, 4639, 4832, 5896
Tsp45I GTSAC 8 cut(s) 1700, 2113, 2187, 2264, 3596, 4639, 4832, 5896
TspGWI ACGGA 5 cut(s) 1682, 2864, 3454, 6422, 6729
Van91I CCANNNNNTGG 1 cut(s) 6827
VpaK11BI GGWCC 9 cut(s) 1132, 2681, 2984, 3827, 4259, 4556, 5324, 6027, 6604
VspI ATTAAT 1 cut(s) 3909
XbaI TCTAGA 5 cut(s) 1231, 1447, 1888, 1895, 4517
XceI RCATGY 7 cut(s) 1616, 1808, 2082, 2114, 4394, 5670, 5969
XcmI CCANNNNNNNNNTGG 2 cut(s) 2144, 2804
XmiI GTMKAC 2 cut(s) 2210, 3122
XmnI GAANNNNTTC 2 cut(s) 354, 517
ZrmI AGTACT 3 cut(s) 3608, 5004, 5059
Zsp2I ATGCAT 4 cut(s) 747, 1939, 2446, 5077
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.