Rh7CG218900

Agenet domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0002656
Physical Location & Seq
Reverse (-)
20072345 .. 20082298
9954 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG218900.1

Sequence Viewer

Length: 7059 bp
ATGGAGTATGATGACAATGATTTTCAAAGCCAGAATCTTCAATTAGCTGGTGAAGGGAGCATCAATTGTCCTCCAGTTTTACAGCCATATGGTCTTCCCAAATTTGATTTTGATGACAGCCTTCAGGGGCATTTGAGGTTTGATAGTTTGGTTGAAACTGAGGTTTTTCTTGGCATTGAGAGTAGCGAAGCTAACAACTGGATTGAGGATTTCTCTCGTGGGAGTAGTGGGATAGAGTTTAGTTCAAGTGCAGTAGAATCGTGCTCTATATCAAGGCGGAACAATGTTTGGTCTGAGGCCACGTCCTCAGAATCTGTTGAAATGCTATTAAAATCTGTTGGGCAGGAAGAAATAATTCCCGCTCAGACTATCTTGGAGGAATCAGATGCCTGTAAGGAAGTGGGTTGCATAAAACAGATGGAGACTAATTTGAAGAATGATGATAACATTCTCACTGAAACAGGGGATGTTAGAGATCTACATTCTACTTTACTGCTAGATGAAACTGCCGGAAACCTTTCTGGCTTAGATAATGTTGGAGATCAGCCTCGGCTTGAGGATGCTTCAAAAACTCAGGAAGTTGAATTACCGGTTGATGGAAATTCAAGTGTTTTGGATCCAAATTCTGTCAGTGATCGGGATAGGCTGCCTGTAACTACAGGGAGCCTGACTGATGATAAAGGCAAGGATGTGAATAATATGGAATTTGATAATTTAGTTGATTATCCTCCAGATAAAAAAATGCATGAAAATTCATCTGCTTCAGAGATGCAAGTTGATAATATGATGACTTCTGTGCGAAGTATTATTACAAGCAGTGATGAGTTGAATAATCAAGATGTTCAACATCATATAGTGGATATTACTGAAGAGAATCCAGGCAGTCATGATGTGGCAAGCATAGATATTCAATGTAGGAATGATTTGGACAAACCTCATTGTTTAGCTTCAGAGGTGGAGTCTGGAAAAAAAGAAATTGCAAATGAAGATACTGTTATTGATGTGCAGGAAGCGTCTAAAATTATGCTGCAAGGGGATTCTATTTTACATACAATGGGTGGATGCAGTGATAAGGAATGTCCTGGAGTTCTTACTGAGACCAATAAATGTGAAGATCTGGTAGTGTCTAAGGACCTTGATGTTGGTGGTGATCAATCCACAATGACCTACACAAATGATGCTGGGTATGGAATTGAGGTTAGGAACAACCTTGGCGAAATTTCTTCCAGTCTAGATCCTATTCTGAAAGGGGAATCTGATTTACTGACAGTGGACAGATGCACTGACAGGGAATGCCCTGAAGTTCTTAATGACACCAACAAATGTGAAGATGTTGTTATCTCTTTTAAAGACACAGATACTGGTGGTGTTCCAGCTAAGTCTGACAAAAATGACAGTGGTTATGGCACTGAGGATCGGAACAGCAATACTGGAGTTTTGTCTGGTCTAGATCCTACCCTCAAAGGGGATTCTAACTTGTGTACAATGGATGTATGTACTGTCAAGGAATCCCCTGAAGTTCCTTCTGTCTCGTTGAAAGCTACAGACACTGGTGGTGATCAATCTAAATTACACACACCTGACTTATCACCAATGGCCTATGGGAATGACACTGGGCATGCAGTTGAACTTGGCAACAGTGTTTCTGCCTGTGTAAGCCCTACCTTGAGAACGGATAATGATTTACATACAGTGGATGCAAGTAGTGACAGGAAATGCCCTGATGTTCCTGTGGAGACCACTAAATGTGAAGACATAGTGTTGTCCAAAGGCACAGATACTACCGGTGATCAATCTAACATAAGCCCACATGTTTTATCACCTGTAGCCTACAAAAGTGATACTGTGTATGCAGATGAGGTCGGGAACAGCAATTCTGGATTTTCGTCCAGTCTAGACTCTAGATTGAAGGTGAATTCTGGAAAGAGCACCAAGGAGGATGCATTAAAAAGTGGTGGCCAACCCCTTGATAGTGAGATTTTGGTCAGAAAGTCTGAGGCTTCTATGGCAGTCATTGAGGAAACTGAGGTTTTCAAAGGCAGAGGTGATGAGAATCCGGAAGTTCATTCTAATTTGACTCCAACATGCTCTTCAGCCGAAATGCCTAGTGAAGTGCATGTGACTGGAGCTTCTAAAAGTCTTCATGATGCTTTTGGAGTTTCTGCTGAGGAATTAAATGAAGAAAGCCATGTGTCACCTTCTAATCTGAAGGAGTCTACAGAAAGGTGTTCTGAAAATGAAGTTTGCAAAGAAGGTATATCTGGTAAATGTGACCAGGATCTCTCTTACAGTGAAAAGGATACTACAAATTTGCCTGTTGAATCTAATAGTATGGATTTGGAGTTTGTTGGATCTGCTGGTAAGGGAGATGAGTCCTCATCTTTGTCTGAAGATTCTGCAGAAAAAGAGTTGATTGTTCCAACACTAAAACATGATGTTGATGGCAATGCATCAGTGGCTGATGTTCCCTTGGAAAGTTGTGATCTGGCTTCTTGCGGCACAAGGGATGTTGTTCCCTTGTCTTCTGAGAATGGTGCAACCACACATATTCATAACGTATCAGTGGTTCCTGCAGCACCTTCTCCTGCTATGGGATCACACTCGGACAATAAAGGAGAAACTGCAATCGAAATATCCAAAGATGCAAGTGTATCAGTTACAGTGTCATCACCTATGGTAGAATCTGGACCAGGCCCTGTTTGTGAAGCTGAAAAAGGTGCTTCTTGTGATACTGCTGGACAACTGTTATGCAATACGCTTGATCAGTCTCTGCCAATTTCAGTTAGTTGCAATACTGAAAACCAAAGTGAACCTGGAACAGCAGTTGCTATTGAAATTAGCAAGAGAAGCACAACGGATATGGAAGTAAAACGAGGTGATGATGCTGAAGCTCAAGATGGAGCAACAACAGAAAACAAATCTACCACAGAAGACAAATCTGAAAAGGCATCAGCGAATGTAACAGGTGATGCTTTTGGAAATTTTGAAGGTCCAATGCTTTCTACTTGTTCGCCCGAATCTTGTTCTAAGTCTGCTGATCCCTACCAGCCTGGTTGTGATTATCCCAAAGTTTTTGGAACAACTGAGATTCCTGAGACTAAACATGAAAAAGGCAATATCAAGGAGTCGACAAATCAGACTGCCGCAGATACTAACGTAGTTGGGGATGGCGGCAAACATTCTTCTAATTCCTCGAATCCAACTGGAAATGATGTCCCCAAAGATCAGGGATATGGCACCTCAGATATCACTTCCTTTGCAGATTTGCCTATAGGGGTTGCTGCCAACAGCTCGCAGCCCTTTCCTGCTATTTCAGCTCCCAAAATTGTAGATGGGTCTCAAACAAATTCTGCCTCAGGCCAGATGGATGCAAAGATCTCGCAAGAAATTTCTCGTGGAGGTGATGGAGAGATTGCTAGTGGTGGTTCTAAAGGTACCACAGAACGGAAAAGAAGGCGAGCACCTAGTAAGGGAACAGGTAAAGAGAGTGCTAAGAAGGGAACTGTGAAAGCGACAACTCCTATGAGACAAGCAGACAGAGGAGACAAATCTAGCAGTGTGCCCCTGGGGAAATCTGGAATTTTTCAGTTTGCGCATCCAAGTGACATACAGTACTTTGGGCTTGTGGATAGTAGCTCAAAAACTTATTCTGTTCTTACTAGTGCAACATCTAGTCTGCCAGATCTGAATTCTTCTGCTCCAGCATCTCTAGTATTTCAGCAGCCTTTCACCGATCTGCAGCAAGTGCAATTACGTGCTCAGATCTTTGTTTATGGAGCTTTGATTCAAGGAACAGCACCTGATGAAGCTTATATGATGTCGGCATATGGAGGACCTGATGGTGGAAGGAGTATCTGGGAGAATGCGTGGCGTAAGTGCATAGAGAGGCTACACAGTCAAAAATCTACCCCTATTAATCCAGAAACCCTTTTGCAGTCATCCTCTGACCTGAGATTTACAGGTGGTAGGGTTCCTGATCAAGCTGGTAAACAAAGTGCATTCCAGGGTAAAGTTATCTCCTCACCTGCTGGTCGAGCCAGCACAAAGGGTATTCCACCTACTGCGAGTCCCATGATACCAATTTCATCACCGCTTTGGAGCATTCCTACCCCTGCTTGTGAGGCCCCTCAATATAGTGTTCTGCCGAGAGGTTCGGTAATGGATTATCAGCAGGCCCATACTCCATTGCATCCTTTCCAAACATCACCCATAAGGAACATTGTTGGACAAAATTCCTCGTGGATGTCTCAGTCCCCGTTTCGGGGTCCCTGGGTTCCTTCTCCACAGTCATCTGCAGCCGAAACCAGTATTCGTTTCTCAGCATTTCCTAGTACAGAGTCAGTGCTGCTGACTCCTGTAAAAGAAACAACTTCATCACAAGTATCCAGTATAAAGCATGCCTCCTCGGTTGTTACTGGTCAAACTGGGGGTACAACCAGTGTTTTTGCAGGGGTTGCTCCACTGCTTGACTCAAAGAAAGTGGGAGTAGCATCACCTGGCGAGCCTTCATCTCAACCTAAGTCTAGAAAAAGAAAAAAGATCTCAGATTCTAAGGAACTTGGTCCGATTAGTTTGCAGCCTCAATCTGAACCTGAGTCAGCTATAACCCTGGCTGTTACTAGTAGTGTATCTACATCTGTTGTAGTCACTGCCCCAAGTACCTTTGTGTCTAAGGCCATGCCAGAAAAATTGGCTATGTCGGTATCCTCCGATCACCTCAAGAAAGCAGATCTTGGTTTGGAGCAGAGGGCAACTTTATCAAAAGAGACTCTTAGTAAAGCTAAGGAGGCTAGGCAACAAGCAGAGGAAGCTTCTGCTCATGCTGCTGCAGCTGTTGGTCACAGTCAAGAAATATGGAGTCAGTTGGATAAGCAGAAACATTCCGGATTGACATCAGATGCCGAAGCCAAATTAGCTTCTGCTGCTGTTGCTGTAGCTGCCGCCGCTGCTGTTGCAAAAGCAGCAGCTGCAGCTGCCAATGTTGCGGCAAATGCTGCATTGCAAGCAGTACTGATGGCTGAGGAAGCCTATGGGAATCAAAGCGAAAGTATGGTAGATTTGAGTACTGATGGAGTGAATGCATTGGGATTGGCTGCTCCAGGATCTGTTTTTAGGGCTGAGGATGGAACAAACAGTTCAAGTTCAATCCTCTTTGCTGCTAGAGAGGCTGCTAGAAGGAGGGTTGAAGCTGCATCTGCAGCCTCAAAGCGAGCTGAAAATATGGACGCCATAGTAAAAGCTGCTGAGCTAGCCGCAGAAGCTGTATCACAAGCTGGAACAGTTGTTGCTATGGGTGATCCTGTGCCTTTGAGCGACTTGGTAAAAGCTGGTCCTGAGGGTTATTGGAAAGCACCCCAAGTATCTTCAGAGACTGTTAAGAAATCAAATGACGGAATGAGGGAACAATCAAATTTTTCCACTGTTGGAGAAGATTCAGATAAGGAAGAAACACTGATCACTGCCACTAAGAAATCGCCTACAGTCAGTGAAAGGGTTACTGAGATTATAAAGTCTGCTTTGCCCACTGCTGGGAATGATCTTGGAAAAACTGCAGAAGAGTCCAAAGATAGCTGCATCGTTGAGGGTTCTCAAGTAGAGGTTTTCAAAGAAGGGGGTGGATTTGCAGTGGGCTGGTTCACAGCTACTGTATTGAGTTTGCAGGATGGCAAGGCATGTGTATGTTACACTGAGCTTCAGTCAGACGAAGGCTCAGGGAAACTACAGGAATGGGTGGCACTTGACAGCAAAGACGATAAGCCACCAAAAATACGTGTTGCTCGCCTTCTTACCCCCTCCCTTGAAGGAACAAGGAAAAGGCGGAGAGAAGCAATGGCAGATTATGCTTGGTCTGTTGGAGACAAAGTTGATGCCTGGATACAAAACAGCTGGTGGGAAGGTGTTGTGACTGAAAAAAACAAGAAAGATGAAACTATACTAAAAGTCCACTTTCCAGCTCAAGGGGAAACATCACATGTTAAAGCTTGGCATCTTCGGCCTTCTCTGATTTGGAAGGATGGGGAATGGGTTGAATGGTCCAGTGTGCGGAATGACGGCTCTTCCATGGAGGATGGCTTGCCGCAGGAAAAGCGAATCAAATTGGGCAGTTCTACAGTGGAAGGAAAAGGGAAGGATAAGACTTTAAAAAGCAATGTTCTTGATTCAGGAAAACCTGAAGAGCCAAGTTTGCTGAATTTGTCTGCAAATGAAAAGGTATTTAATATAGGTAAAAATACCAGGATTGAGAATAAGCTTGATGGAGCCAGAACAAATCGGACAGGGTTGCAGAAGGAAGGATCAGTAAAATTTGGTATTCCGAAGCCCAAAAGAAAATTTATGGAAGTTAGCAAGCATTATGTGGCCAATCAGACTAGTAAGGTTAACGAGTCTAATGATTCAGTGAAATTTGCGAAATATTTGATGCCACAGTCATCAGGTTTCCGTGCATTGAAAAATACATCTAAATTTGATACAAAGGACAAAGAGGGGGCCGATAACAAGCTAAAGGGTTTTAGATCTGAAAAGCAGCGGAGTATGTCGGATAAAACAGTTCCTCAGAAGGACAACTTTTCAATAGATTTAGTTTCTGCTGCGGATGGCTCCAGTAAGATGGACCATACAAGAAAGGTCAAAGACTCTGTAAGACAAGCTGAGGGTTTATCTGGCAAGCGCAACATATTTGAGACGGGATCAGGTTATAGCTCAGATGGAAGAGCACAGGGTGCAGCCATGTTTTCTTCACGAACTCCGTTGTCAGATTTACCTCCATCCAAGAAGGTAGCCACTACAACTGCTAAATCCGAACGGGGAAATAAAGGAAATTTTGCACCAGTTGTTGGCAAGTTGGGTAAAATTGAGGAGGGCAAAGGTACAAGTAGTAATCCTGTAAGGTCAACTTCAGAAGTAGTCGAGCCTCGTAGATCAAATCGCAGAATTCAGCCCACATCAAGACTATTGGAAGGACTGCAAAGTTCGTTGAGCATTTCAAAGATTCCTTCCGTTTCACATGAGAAGCCCAGAAGTCAGAATAGAAATGGTTCTAGAGGGAGTAACCATGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Agenet

Protein Analysis

2352

Amino Acids

250.28

Weight (kDa)

4.97

Isoelectric Point (pI)

49.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Agenet PF05641 1862 - 1914 1.4e-10 Agenet domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 5507
AarI CACCTGC 1 cut(s) 4033
Acc16I TGCGCA 1 cut(s) 3594
Acc36I ACCTGC 1 cut(s) 4033
Acc65I GGTACC 1 cut(s) 3434
AccB1I GGYRCC 2 cut(s) 3236, 3434
AccB7I CCANNNNNTGG 1 cut(s) 6833
AccBSI CCGCTC 1 cut(s) 362
AccI GTMKAC 2 cut(s) 2216, 3128
AccIII TCCGGA 2 cut(s) 2056, 4883
AcoI YGGCCR 2 cut(s) 1957, 6357
AcyI GRCGYC 1 cut(s) 5226
AdeI CACNNNGTG 1 cut(s) 6719
AflIII ACRYGT 3 cut(s) 1810, 5770, 5971
AgeI ACCGGT 2 cut(s) 589, 1784
AhlI ACTAGT 3 cut(s) 3659, 4619, 6368
AjiI CACGTC 1 cut(s) 303
AjuI GAANNNNNNNTTGG 2 cut(s) 2074, 2106
Alw21I GWGCWC 5 cut(s) 266, 1931, 3463, 3760, 6715
Aor13HI TCCGGA 2 cut(s) 2056, 4883
AseI ATTAAT 1 cut(s) 3915
AsiGI ACCGGT 2 cut(s) 589, 1784
Asp700I GAANNNNTTC 3 cut(s) 354, 517, 7033
Asp718I GGTACC 1 cut(s) 3434
AspLEI GCGC 2 cut(s) 3595, 6669
AsuNHI GCTAGC 1 cut(s) 5248
AvaII GGWCC 9 cut(s) 1132, 2687, 2990, 3833, 4265, 4562, 5330, 6033, 6610
AxyI CCTNAGG 2 cut(s) 3355, 5334
BaeGI GKGCMC 1 cut(s) 3564
BaeI ACNNNNGTAYC 2 cut(s) 3141, 3174
BalI TGGCCA 2 cut(s) 1959, 6359
BamHI GGATCC 1 cut(s) 616
BanI GGYRCC 2 cut(s) 3236, 3434
BarI GAAGNNNNNNTAC 4 cut(s) 570, 602, 793, 825
BauI CACGAG 3 cut(s) 216, 3393, 4237
BbsI GAAGAC 5 cut(s) 86, 1758, 2132, 2514, 2937
Bbv12I GWGCWC 5 cut(s) 266, 1931, 3463, 3760, 6715
BbvCI CCTCAGC 4 cut(s) 2166, 5019, 5118, 6648
BceAI ACGGC 1 cut(s) 6067
BcgI CGANNNNNNTGC 6 cut(s) 240, 274, 3360, 3394, 4555, 4589
BciVI GTATCC 4 cut(s) 2293, 4393, 4714, 5868
BclI TGATCA 6 cut(s) 1150, 1558, 1789, 2761, 3976, 5454
BcuI ACTAGT 3 cut(s) 3659, 4619, 6368
BfuAI ACCTGC 1 cut(s) 4033
BfuI GTATCC 4 cut(s) 2293, 4393, 4714, 5868
BglII AGATCT 8 cut(s) 475, 1114, 3375, 3682, 3762, 4539, 4729, 6512
BlpI GCTNAGC 1 cut(s) 5244
BmcAI AGTACT 3 cut(s) 3614, 5010, 5065
Bme18I GGWCC 9 cut(s) 1132, 2687, 2990, 3833, 4265, 4562, 5330, 6033, 6610
BmgBI CACGTC 1 cut(s) 303
BmrI ACTGGG 2 cut(s) 1623, 4434
BmtI GCTAGC 1 cut(s) 5252
BmuI ACTGGG 2 cut(s) 1623, 4434
BpiI GAAGAC 5 cut(s) 86, 1758, 2132, 2514, 2937
BplI GAGNNNNNCTC 2 cut(s) 197, 229
BpmI CTGGAG 8 cut(s) 57, 714, 1104, 1452, 2145, 3684, 5082, 6583
Bpu10I CCTNAGC 6 cut(s) 2166, 4782, 5019, 5118, 5710, 6648
Bpu1102I GCTNAGC 1 cut(s) 5244
BpuEI CTTGAG 6 cut(s) 575, 1687, 2877, 4703, 5574, 5940
BsaAI YACGTR 2 cut(s) 3755, 5771
BsaBI GATNNNNATC 2 cut(s) 2052, 4891
BsaHI GRCGYC 1 cut(s) 5226
BsaI GGTCTC 3 cut(s) 1091, 1730, 3342
BsaWI WCCGGW 4 cut(s) 589, 1784, 2056, 4883
BsaXI ACNNNNNCTCC 4 cut(s) 3851, 3881, 5847, 5877
Bse118I RCCGGY 2 cut(s) 589, 1784
Bse21I CCTNAGG 2 cut(s) 3355, 5334
Bse3DI GCAATG 5 cut(s) 2452, 4184, 4997, 5835, 6154
Bse8I GATNNNNATC 2 cut(s) 2052, 4891
BseAI TCCGGA 2 cut(s) 2056, 4883
BseJI GATNNNNATC 2 cut(s) 2052, 4891
BseMI GCAATG 5 cut(s) 2452, 4184, 4997, 5835, 6154
BseRI GAGGAG 4 cut(s) 3555, 4009, 4393, 6869
BseSI GKGCMC 1 cut(s) 3564
BseYI CCCAGC 2 cut(s) 1181, 5528
BsgI GTGCAG 3 cut(s) 270, 1025, 6741
BshNI GGYRCC 2 cut(s) 3236, 3434
BshTI ACCGGT 2 cut(s) 589, 1784
BsiHKAI GWGCWC 5 cut(s) 266, 1931, 3463, 3760, 6715
BsiSI CCGG 5 cut(s) 510, 590, 1785, 2057, 4884
BslFI GGGAC 4 cut(s) 3200, 4053, 4237, 4251
BsmBI CGTCTC 1 cut(s) 6674
BsmFI GGGAC 4 cut(s) 3200, 4053, 4237, 4251
BsmI GAATGC 5 cut(s) 1298, 3868, 3998, 4101, 5083
Bso31I GGTCTC 3 cut(s) 1091, 1730, 3342
Bsp1286I GDGCHC 6 cut(s) 266, 1931, 3463, 3564, 3760, 6715
Bsp13I TCCGGA 2 cut(s) 2056, 4883
Bsp1407I TGTACA 1 cut(s) 1481
Bsp1720I GCTNAGC 1 cut(s) 5244
Bsp19I CCATGG 1 cut(s) 6060
BspEI TCCGGA 2 cut(s) 2056, 4883
BspHI TCATGA 2 cut(s) 886, 2143
BspMAI CTGCAG 8 cut(s) 2401, 2575, 3741, 4297, 4831, 4972, 5200, 5554
BspMI ACCTGC 1 cut(s) 4033
BspOI GCTAGC 1 cut(s) 5252
BspQI GCTCTTC 4 cut(s) 2095, 6061, 6168, 6703
BspT107I GGYRCC 2 cut(s) 3236, 3434
BspTNI GGTCTC 3 cut(s) 1091, 1730, 3342
BsrBI CCGCTC 1 cut(s) 362
BsrDI GCAATG 5 cut(s) 2452, 4184, 4997, 5835, 6154
BsrFI RCCGGY 2 cut(s) 589, 1784
BsrGI TGTACA 1 cut(s) 1481
BssAI RCCGGY 2 cut(s) 589, 1784
BssNI GRCGYC 1 cut(s) 5226
BssSI CACGAG 3 cut(s) 216, 3393, 4237
BssT1I CCWWGG 4 cut(s) 1210, 1932, 2469, 6060
Bst2BI CACGAG 3 cut(s) 216, 3393, 4237
Bst6I CTCTTC 6 cut(s) 864, 2095, 5550, 6061, 6168, 6703
BstACI GRCGYC 1 cut(s) 5226
BstAPI GCANNNNNTGC 6 cut(s) 3745, 4454, 4967, 4994, 5840, 6719
BstAUI TGTACA 1 cut(s) 1481
BstBAI YACGTR 2 cut(s) 3755, 5771
BstDSI CCRYGG 1 cut(s) 6060
BstHHI GCGC 2 cut(s) 3595, 6669
BstNSI RCATGY 7 cut(s) 1622, 1814, 2088, 2120, 4400, 5676, 5975
BstSLI GKGCMC 1 cut(s) 3564
BstV2I GAAGAC 5 cut(s) 86, 1758, 2132, 2514, 2937
BstXI CCANNNNNNTGG 1 cut(s) 6607
Bsu36I CCTNAGG 2 cut(s) 3355, 5334
BsuI GTATCC 4 cut(s) 2293, 4393, 4714, 5868
BtgI CCRYGG 1 cut(s) 6060
BtrI CACGTC 1 cut(s) 303
BtsI GCAGTG 8 cut(s) 823, 1072, 3562, 4460, 4647, 5457, 5523, 5631
BveI ACCTGC 1 cut(s) 4033
CciI TCATGA 2 cut(s) 886, 2143
CfoI GCGC 2 cut(s) 3595, 6669
Cfr10I RCCGGY 2 cut(s) 589, 1784
CseI GACGC 2 cut(s) 1002, 5234
CspAI ACCGGT 2 cut(s) 589, 1784
CspCI CAANNNNNGTGG 2 cut(s) 4461, 4496
DraI TTTAAA 2 cut(s) 1348, 6141
DraIII CACNNNGTG 1 cut(s) 6719
EaeI YGGCCR 2 cut(s) 1957, 6357
Eam1104I CTCTTC 6 cut(s) 864, 2095, 5550, 6061, 6168, 6703
EarI CTCTTC 6 cut(s) 864, 2095, 5550, 6061, 6168, 6703
EciI GGCGGA 2 cut(s) 292, 5833
Eco130I CCWWGG 4 cut(s) 1210, 1932, 2469, 6060
Eco31I GGTCTC 3 cut(s) 1091, 1730, 3342
Eco32I GATATC 1 cut(s) 3247
Eco47I GGWCC 9 cut(s) 1132, 2687, 2990, 3833, 4265, 4562, 5330, 6033, 6610
Eco81I CCTNAGG 2 cut(s) 3355, 5334
EcoO109I RGGNCCY 5 cut(s) 1132, 2693, 3833, 4123, 4265
EcoRI GAATTC 3 cut(s) 1915, 3688, 6930
EcoRV GATATC 1 cut(s) 3247
EcoT14I CCWWGG 4 cut(s) 1210, 1932, 2469, 6060
EcoT22I ATGCAT 4 cut(s) 747, 1945, 2452, 5083
ErhI CCWWGG 4 cut(s) 1210, 1932, 2469, 6060
Esp3I CGTCTC 1 cut(s) 6674
FalI AAGNNNNNCTT 8 cut(s) 4716, 4748, 4755, 4787, 6548, 6580, 6877, 6909
FaqI GGGAC 4 cut(s) 3200, 4053, 4237, 4251
FauI CCCGC 1 cut(s) 367
FauNDI CATATG 2 cut(s) 88, 3826
FbaI TGATCA 6 cut(s) 1150, 1558, 1789, 2761, 3976, 5454
FblI GTMKAC 2 cut(s) 2216, 3128
FspI TGCGCA 1 cut(s) 3594
GlaI GCGC 2 cut(s) 3594, 6668
GsaI CCCAGC 2 cut(s) 1185, 5532
GsuI CTGGAG 8 cut(s) 57, 714, 1104, 1452, 2145, 3684, 5082, 6583
HapII CCGG 5 cut(s) 510, 590, 1785, 2057, 4884
HgaI GACGC 2 cut(s) 1002, 5234
HhaI GCGC 2 cut(s) 3595, 6669
Hin1I GRCGYC 1 cut(s) 5226
Hin6I GCGC 2 cut(s) 3593, 6667
HinP1I GCGC 2 cut(s) 3593, 6667
HincII GTYRAC 3 cut(s) 3129, 6379, 6891
HindII GTYRAC 3 cut(s) 3129, 6379, 6891
HindIII AAGCTT 4 cut(s) 3807, 4809, 5979, 6248
HpaI GTTAAC 1 cut(s) 6379
HpaII CCGG 5 cut(s) 510, 590, 1785, 2057, 4884
HpyCH4IV ACGT 5 cut(s) 302, 2556, 3156, 3754, 5770
HpySE526I ACGT 5 cut(s) 302, 2556, 3156, 3754, 5770
Hsp92I GRCGYC 1 cut(s) 5226
HspAI GCGC 2 cut(s) 3593, 6667
KflI GGGWCCC 1 cut(s) 4265
Kpn2I TCCGGA 2 cut(s) 2056, 4883
KpnI GGTACC 1 cut(s) 3438
Ksp22I TGATCA 6 cut(s) 1150, 1558, 1789, 2761, 3976, 5454
KspAI GTTAAC 1 cut(s) 6379
LguI GCTCTTC 4 cut(s) 2095, 6061, 6168, 6703
MaeII ACGT 5 cut(s) 302, 2556, 3156, 3754, 5770
MbiI CCGCTC 1 cut(s) 362
MfeI CAATTG 1 cut(s) 64
MhlI GDGCHC 6 cut(s) 266, 1931, 3463, 3564, 3760, 6715
MlsI TGGCCA 2 cut(s) 1959, 6359
MluNI TGGCCA 2 cut(s) 1959, 6359
Mox20I TGGCCA 2 cut(s) 1959, 6359
Mph1103I ATGCAT 4 cut(s) 747, 1945, 2452, 5083
MroI TCCGGA 2 cut(s) 2056, 4883
MroXI GAANNNNTTC 3 cut(s) 354, 517, 7033
MscI TGGCCA 2 cut(s) 1959, 6359
MslI CAYNNNNRTG 2 cut(s) 3600, 5677
Msp20I TGGCCA 2 cut(s) 1959, 6359
MspA1I CMGCKG 6 cut(s) 4832, 4946, 4967, 4973, 5886, 6526
MspI CCGG 5 cut(s) 510, 590, 1785, 2057, 4884
MunI CAATTG 1 cut(s) 64
Mva1269I GAATGC 5 cut(s) 1298, 3868, 3998, 4101, 5083
NcoI CCATGG 1 cut(s) 6060
NdeI CATATG 2 cut(s) 88, 3826
NheI GCTAGC 1 cut(s) 5248
NmeAIII GCCGAG 2 cut(s) 529, 4170
NmuCI GTSAC 8 cut(s) 1706, 2119, 2193, 2270, 3602, 4645, 4838, 5902
NsbI TGCGCA 1 cut(s) 3594
NsiI ATGCAT 4 cut(s) 747, 1945, 2452, 5083
NspI RCATGY 7 cut(s) 1622, 1814, 2088, 2120, 4400, 5676, 5975
PaeI GCATGC 2 cut(s) 1622, 4400
PagI TCATGA 2 cut(s) 886, 2143
PaqCI CACCTGC 1 cut(s) 4033
PasI CCCWGGG 2 cut(s) 3565, 4269
PciI ACATGT 2 cut(s) 1810, 5971
PciSI GCTCTTC 4 cut(s) 2095, 6061, 6168, 6703
PctI GAATGC 5 cut(s) 1298, 3868, 3998, 4101, 5083
PdmI GAANNNNTTC 3 cut(s) 354, 517, 7033
PflMI CCANNNNNTGG 1 cut(s) 6833
PfoI TCCNGGA 2 cut(s) 1081, 5098
PinAI ACCGGT 2 cut(s) 589, 1784
Ppu21I YACGTR 2 cut(s) 3755, 5771
PpuMI RGGWCCY 3 cut(s) 1132, 3833, 4265
PscI ACATGT 2 cut(s) 1810, 5971
PshBI ATTAAT 1 cut(s) 3915
PsiI TTATAA 1 cut(s) 5507
Psp5II RGGWCCY 3 cut(s) 1132, 3833, 4265
PspFI CCCAGC 2 cut(s) 1181, 5528
PspPPI RGGWCCY 3 cut(s) 1132, 3833, 4265
PsrI GAACNNNNNNTAC 2 cut(s) 2550, 2582
PstI CTGCAG 8 cut(s) 2401, 2575, 3741, 4297, 4831, 4972, 5200, 5554
PvuII CAGCTG 4 cut(s) 4832, 4967, 4973, 5886
RseI CAYNNNNRTG 2 cut(s) 3600, 5677
SalI GTCGAC 1 cut(s) 3127
SapI GCTCTTC 4 cut(s) 2095, 6061, 6168, 6703
ScaI AGTACT 3 cut(s) 3614, 5010, 5065
SduI GDGCHC 6 cut(s) 266, 1931, 3463, 3564, 3760, 6715
SinI GGWCC 9 cut(s) 1132, 2687, 2990, 3833, 4265, 4562, 5330, 6033, 6610
SmiMI CAYNNNNRTG 2 cut(s) 3600, 5677
SmlI CTYRAG 6 cut(s) 554, 1666, 2892, 4718, 5589, 5955
SmoI CTYRAG 6 cut(s) 554, 1666, 2892, 4718, 5589, 5955
SpeI ACTAGT 3 cut(s) 3659, 4619, 6368
SphI GCATGC 2 cut(s) 1622, 4400
SspI AATATT 1 cut(s) 6413
StyI CCWWGG 4 cut(s) 1210, 1932, 2469, 6060
TaiI ACGT 5 cut(s) 305, 2559, 3159, 3757, 5773
TaqI TCGA 5 cut(s) 2628, 3128, 3194, 4033, 6906
TatI WGTACW 6 cut(s) 1481, 1496, 3612, 4331, 5008, 5063
TauI GCSGC 8 cut(s) 2499, 3146, 3174, 4943, 4946, 4988, 5255, 6079
TseFI GTSAC 8 cut(s) 1706, 2119, 2193, 2270, 3602, 4645, 4838, 5902
Tsp45I GTSAC 8 cut(s) 1706, 2119, 2193, 2270, 3602, 4645, 4838, 5902
TspGWI ACGGA 7 cut(s) 1688, 2870, 3460, 5406, 6428, 6735, 6985
Van91I CCANNNNNTGG 1 cut(s) 6833
VpaK11BI GGWCC 9 cut(s) 1132, 2687, 2990, 3833, 4265, 4562, 5330, 6033, 6610
VspI ATTAAT 1 cut(s) 3915
XbaI TCTAGA 6 cut(s) 1231, 1447, 1894, 1901, 4523, 7037
XceI RCATGY 7 cut(s) 1622, 1814, 2088, 2120, 4400, 5676, 5975
XcmI CCANNNNNNNNNTGG 1 cut(s) 2810
XmiI GTMKAC 2 cut(s) 2216, 3128
XmnI GAANNNNTTC 3 cut(s) 354, 517, 7033
ZrmI AGTACT 3 cut(s) 3614, 5010, 5065
Zsp2I ATGCAT 4 cut(s) 747, 1945, 2452, 5083
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.