Rmu_sc0007812.1_g000001

Agenet domain

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007812.1
Physical Location & Seq
Reverse (-)
1 .. 10848
10848 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007812.1_g000001.1.cds

Sequence Viewer

Length: 5878 bp
atggtggttgtgacttgtgagattcatcccaaatgcttgaagaaaaaatcggacctttgtcggcttttgaaggtgctaatagctcatcacactgatgagcgctcgattggggagcagctgagagatcaaccgggccggatttcgtcaccggatggagggagggattcacccatggagtatgatgacaatgattttcaaagccagaatcttcaattagctggtgaagggagcaccaattgtcctccagttttacagccatatggtcttcccaaatttgattttgatgacagccttcaggggcatttgaggtttgatagtttggttgaaactgaggtttttcttggcattgagagtagcgaagctaacaactggattgaggatttctctcgtgggagtagtgggatagagtttagttcaagtgcagtagaatcgtgctctatatcaaggcggaacaatgtttggtctgaggccacgtcctcagaatctgttgaaatgctattaaaatctgttgggcaggaagaaataattcccgctcagactatcttggaggaatcagatgcctgtaaggaagtgggttgcataaaacagatggagactaatttgaaaaatgatgataacattctcgccgaaacaggggatgttagagatctacattctactttactgctagatgaaactgccggaaacctttctggcttagataatgttggagatcagcctcggcttgaggatgcttcacaaactcaggaagttgaattaccggttggtggaaattcaagtgttttggatccaaattctgtcagtgatcaggataggctgcctgtaactacagggagcctgactgatgataaaggcaaggatgtgaataatatggaatttgataatttagttgattatcctccagataaaaaaatgcatgaaaattcatctgcttcagagatgcaagttgataatatgatgacttctgtgcgaagtattattacaagcagtgatgagttgaataatcaagatgttccacatcatatagtggatattactgaagagaatccaggcagtcatgatgtggcaagcatagatattcaatgtaggaatgatttggacaaacctcattgtttagcttcagaggtggagtctggaaaaaaagaaattgcaaatgaagatactgttattgatgtgcaggaagcgtctaaaattatgctgcaaggggattctattttacatacaatgggtggatgcagtgataaggaatgtcctggagttcttactgagaccaatagatgtgaagatctggtagtgtctaaggaccccgatgttggtggtgatcaatccacaatgacctacacaaatgatgctgggtatggaattgaggttaggaacaaccttggtgaaatttcttccagtctagatcctattctgaaaggggaatctgatttacagacagtggacagatgcactgacagggaatgccctgaagttcttgatgacaccaacaaatgtgaagatgttgttatctcttttaaagacacagatactggtggtgttccagctaagtctgacaaaaatgacagtggttatggcactgaggatcggaacagcaatactggagttttgtctggtctagatcctaccctcaaaggggattctaacttgtgtacaatggatgtatgtactgtcaaggaatcccctgaagttccttctgtctcgttgaaagctacagacactggtggtgatcaatctaaattacacacacctgacttatcaccaatggcctatgggaatgacactgggcatgcagttgaacttggcaacagtgtttctgcctgtgtaagccctaccttgagaacggataatgatttacatacagtggatgcaagtagtgacaggaaatgccctgatgttcctgtggagaccactaaatgtgaagacatagtgttgtccaaaggcacagatactaccggtgatcaatctaacataagcccacatgttttatcacctgtagcctacaaaagtgatactgtgtatgcagatgaggtcgggaacagcaattctggattttcgtccagtctagactctagattgaaggtgaattctggaaagagcaccgaggaggatgcattaaaaagtggtggccaaccccttgatagtgagattttggtcagaaagtctgaggcttctatggcagtcattgaggaaactgaggttttcaaaggcagaggtgatgagaatccggaagttcattctaatttgactccaacatgctcttcagccaaaatgcctagtgaagtgcatgtgactggagcttctaaaagtcttcatgatggttttggagtttctgctgaggaattaaatgaagaaagccatgtgtcaccttctaatctgaaggagtctacagaaacgtgttctgaaaatgaagtttgcaaagaaggtatatctggtaaatgtgaccaggatctctcttacagtgaaaaggatactacaaatttgcctgttgaatctaatagtatggatttggagtttgttggatctgctggtaagggagatgagtcctcatctttgtgtgaagattctgcagaaaaagagttgattgttccaacactaaaacatgatgttgatggcaatgcatcagtggctgatgttcccttggaaagttgtgatctggcttcttgtggcacaagggatgttgttcccttgtcttctgagaatggtgcaaccacacatattcataacgtatcagtggttcctgcagcaccttctcctgctatgggatcacactcggacaataaaggagaaactgcaatcgaaatatccaaagatacaagtgtatcaggtacagtgtcatcacctatggtagaatctggaccaggccctgtttgtgaagctgaaaaaggtgcttcttgtgatactgctggacaactgttatgcaatacgcttgatcagtctctgccaatttcagttagttgcaatactgaaaaccaaagtgaacctggaacagcagttgctattgaaattagcaagagaagcacaacggatatggaagtaaaacgaggtgatgatgctgaagctcaagatggagcaacaacagaaaacaaatctaccacagaagacaaatctgaaaaggcatcagcgaatgtaacaggtgatgcttttggaaattttgaaggtccaatgctttctacttgttcgcccgaatcttgttctaagtctgctgatccctaccagcctggttgtgattctcccaaagtttttggaacaactgagattcctgagactaaaaatgaaaaaggcaatatcaaggagtcgacaaatcagaatgccgcagatactaatgtagttggggatggcggcaaacattcttctaattcctcgaatccaactggaaatgatgtccccaaagatcagggatatggcacctcagatatcacttcctttgcagatttgcctataggggttgctgccaacagctcgcagccctttcctgctatttcagcttccaaaattgtagatgggtctcaaacaaattctgcctcaggccagatggatgcaaagatttcacaagaaatttctcgtggaggtgatggagagattgctagtggtggttctaaaggtaccacagaacggaaaagaaggcgagcatctagtaagggaacaggtaaagagagtgctaagaagggaactgtgaaagcgacaactcctatgagacaagcagacagaggagacaaatctagcagtgtgcccctggggaaatctggaatttttcagtttgcgcatccaagtgacatacagtactttgggcttgtggatagtagctcaaaaacttattcagttcttactagtgcaacatctagtctgccagatctgaattcttctgctccagcatctctagtatttcagcagcctttcaccgatctgcagcaagtgcaattacgtgctcagatctttgtttatggagctttgattcaaggaacagcacctgatgaagcatatatggtgtcagcatatggaggacctgatggtggaaggagtatctgggagaatgcgtggcgtaagtgcatagagaggctacacagtcaaaaatctacccctattaatgcagaaacccttttgcagtcatcctcggacctgagatttacaggtggtagggttcctgatcaagctggtaaacaaagttcattccagggtaaagttatctcctcacctgctggtcgagccagcacaaagggtattccacttactgcgagtcccatgataccaatttcatcaccgctttggagcattcctacccctgcttgtgaggcccctcaatataatgttctgccgagaggttcggtaatggattatcagcaggcccatactccattgcatcctttccaaacatcacccataaggaacattgttggacaaaattcctcgtggatgtctcagtccccgtttcggggtccctgggttccctctccacagtcatctgcagctgaaaccagtattcgtttctcagcatttcctagtacagagtcagtgctgctgactcctgtaaaagaaacaacttcatcacaagtatccagtataaagcatgcctcctcggttgttactggtcaaactgggggtacaaccagtgtttttgcaggggtttctccactgcttgactcaaagaaagtgggagtagcatcacctggcgagccttcatctcaacctaagtctagaaaaagaaaaaagatctcagattctaaggaacttggtccgattagtttgcagcctcaatctgaacctgagtcagctataaccctggctgttactagtagtgtatctacatctgttgtagtcactgccccaagtacctttgtgtctaaggccatgccagaaaaattggctatgtcggtatcctctgatcaactcaagaaagcagatcttggtttggagcagagggcaactttatcaaaagagactcttagtaaagctaaggaggctaggcaacaagcagaggaagcttctgctcatgctgctgcagctgttggtcacagtcaagaaatatggagtcagttggataagcagaaacattccggattgacatcagatgccgaaaccaaattagcttctgctgctgttgctgtagctgccgccgctgctgttgcaaaagcagcagctgcagctgccaatgttgcggcaaatgctgcattgcaagcagtactgatggctgaggaagcctatgggaatcaaagcgaaagtatgatagacttgagtactgatggagtgaatgcattgggattggctgctccaggatctgtttttagggctgaggatggaacaaacagttcaagttcaatcctttttgctgctagagaggctgctagaaggagggttgaagctgcatctgcagcctcaaagcgagctgaaaatatggacgccatagtaaaagctgctgagctagctgcagaagctgtatcacaagctggaacagttgttgctatgggtgatcctgtgcctttgagcgacttggtaaaagctggtcctgagggttattggaaagcaccccaagtatcttcagagactgttaagaaatcaaatgacggaatgagggaacaatcaaatttttccactgttggagaagattcagataaggaagaaacactgatcactgccactaagaaatcgcctacagtcagtgaaagggttactgagattataaagtctgctttgcccactgctgggaatgatcttggaaaaactgcagtagcgtccaaagatagctgcatctttgagggttctcaagtagaggttttcaaagaagggggtggatttgcagtgggctggttcacagctactgtattgagtttgcagggtggcaaagcatgtgtatgttacactgagcttcagtcagacgaag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1959

Amino Acids

206.45

Weight (kDa)

4.63

Isoelectric Point (pI)

50.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 5678
AarI CACCTGC 1 cut(s) 4204
Acc16I TGCGCA 1 cut(s) 3765
Acc36I ACCTGC 1 cut(s) 4204
Acc65I GGTACC 1 cut(s) 3605
AccB1I GGYRCC 2 cut(s) 3407, 3605
AccBSI CCGCTC 1 cut(s) 533
AccI GTMKAC 2 cut(s) 2387, 3299
AccIII TCCGGA 2 cut(s) 2227, 5054
AciI CCGC 8 cut(s) 448, 531, 3315, 3342, 4262, 5112, 5115, 5156
AcoI YGGCCR 1 cut(s) 2128
AcyI GRCGYC 1 cut(s) 5397
AfeI AGCGCT 1 cut(s) 101
AflIII ACRYGT 2 cut(s) 1981, 2396
AgeI ACCGGT 2 cut(s) 760, 1955
AhlI ACTAGT 2 cut(s) 3830, 4790
AjiI CACGTC 1 cut(s) 474
AjuI GAANNNNNNNTTGG 4 cut(s) 747, 779, 2245, 2277
Alw21I GWGCWC 4 cut(s) 233, 437, 2102, 3931
Aor13HI TCCGGA 2 cut(s) 2227, 5054
Aor51HI AGCGCT 1 cut(s) 101
AoxI GGCC 9 cut(s) 133, 468, 1767, 2128, 2863, 3529, 4293, 4344, 4845
AseI ATTAAT 1 cut(s) 4086
AsiGI ACCGGT 2 cut(s) 760, 1955
Asp700I GAANNNNTTC 2 cut(s) 525, 688
Asp718I GGTACC 1 cut(s) 3605
AspLEI GCGC 2 cut(s) 102, 3766
AsuC2I CCSGG 1 cut(s) 132
AsuNHI GCTAGC 1 cut(s) 5419
AvaII GGWCC 9 cut(s) 52, 1303, 2858, 3161, 4004, 4117, 4436, 4733, 5501
AxyI CCTNAGG 2 cut(s) 3526, 5505
BaeGI GKGCMC 1 cut(s) 3735
BaeI ACNNNNGTAYC 6 cut(s) 2805, 2805, 2838, 2838, 3312, 3345
BalI TGGCCA 1 cut(s) 2130
BamHI GGATCC 1 cut(s) 787
BanI GGYRCC 2 cut(s) 3407, 3605
BarI GAAGNNNNNNTAC 4 cut(s) 741, 773, 964, 996
BauI CACGAG 3 cut(s) 387, 3564, 4408
BbsI GAAGAC 5 cut(s) 257, 1929, 2303, 2685, 3108
Bbv12I GWGCWC 4 cut(s) 233, 437, 2102, 3931
BbvCI CCTCAGC 3 cut(s) 2337, 5190, 5289
BcgI CGANNNNNNTGC 6 cut(s) 411, 445, 2093, 2127, 4726, 4760
BciVI GTATCC 3 cut(s) 2464, 4564, 4885
BclI TGATCA 8 cut(s) 805, 1321, 1729, 1960, 2932, 4147, 4882, 5625
BcnI CCSGG 1 cut(s) 132
BcuI ACTAGT 2 cut(s) 3830, 4790
BfoI RGCGCY 1 cut(s) 103
BfuAI ACCTGC 1 cut(s) 4204
BfuI GTATCC 3 cut(s) 2464, 4564, 4885
BglII AGATCT 6 cut(s) 646, 1285, 3853, 3933, 4710, 4900
BlpI GCTNAGC 1 cut(s) 5415
BmcAI AGTACT 3 cut(s) 3785, 5181, 5236
Bme18I GGWCC 9 cut(s) 52, 1303, 2858, 3161, 4004, 4117, 4436, 4733, 5501
BmgBI CACGTC 1 cut(s) 474
BmrI ACTGGG 2 cut(s) 1794, 4605
BmtI GCTAGC 1 cut(s) 5423
BmuI ACTGGG 2 cut(s) 1794, 4605
BoxI GACNNNNGTC 1 cut(s) 57
BpiI GAAGAC 5 cut(s) 257, 1929, 2303, 2685, 3108
BplI GAGNNNNNCTC 2 cut(s) 368, 400
BpmI CTGGAG 7 cut(s) 228, 885, 1275, 1623, 2316, 3855, 5253
Bpu10I CCTNAGC 4 cut(s) 2337, 4953, 5190, 5289
Bpu1102I GCTNAGC 1 cut(s) 5415
BpuEI CTTGAG 6 cut(s) 746, 1858, 3048, 4874, 5251, 5745
BpuMI CCSGG 1 cut(s) 132
BsaAI YACGTR 1 cut(s) 3926
BsaBI GATNNNNATC 2 cut(s) 2223, 5062
BsaHI GRCGYC 1 cut(s) 5397
BsaI GGTCTC 3 cut(s) 1262, 1901, 3513
BsaWI WCCGGW 5 cut(s) 148, 760, 1955, 2227, 5054
BsaXI ACNNNNNCTCC 2 cut(s) 4022, 4052
Bse118I RCCGGY 2 cut(s) 760, 1955
Bse21I CCTNAGG 2 cut(s) 3526, 5505
Bse3DI GCAATG 3 cut(s) 2623, 4355, 5168
Bse8I GATNNNNATC 2 cut(s) 2223, 5062
BseAI TCCGGA 2 cut(s) 2227, 5054
BseJI GATNNNNATC 2 cut(s) 2223, 5062
BseMI GCAATG 3 cut(s) 2623, 4355, 5168
BseRI GAGGAG 4 cut(s) 2120, 3726, 4180, 4564
BseSI GKGCMC 1 cut(s) 3735
BseYI CCCAGC 2 cut(s) 1352, 5699
BsgI GTGCAG 2 cut(s) 441, 1196
BshFI GGCC 9 cut(s) 135, 470, 1769, 2130, 2865, 3531, 4295, 4346, 4847
BshNI GGYRCC 2 cut(s) 3407, 3605
BshTI ACCGGT 2 cut(s) 760, 1955
BsiHKAI GWGCWC 4 cut(s) 233, 437, 2102, 3931
BsiSI CCGG 8 cut(s) 131, 136, 149, 681, 761, 1956, 2228, 5055
BslFI GGGAC 4 cut(s) 3371, 4224, 4408, 4422
BsmFI GGGAC 4 cut(s) 3371, 4224, 4408, 4422
BsmI GAATGC 5 cut(s) 1469, 3316, 4039, 4272, 5254
BsnI GGCC 9 cut(s) 135, 470, 1769, 2130, 2865, 3531, 4295, 4346, 4847
Bso31I GGTCTC 3 cut(s) 1262, 1901, 3513
Bsp1286I GDGCHC 5 cut(s) 233, 437, 2102, 3735, 3931
Bsp13I TCCGGA 2 cut(s) 2227, 5054
Bsp1407I TGTACA 1 cut(s) 1652
Bsp1720I GCTNAGC 1 cut(s) 5415
Bsp19I CCATGG 1 cut(s) 171
BspACI CCGC 8 cut(s) 448, 531, 3315, 3342, 4262, 5112, 5115, 5156
BspANI GGCC 9 cut(s) 135, 470, 1769, 2130, 2865, 3531, 4295, 4346, 4847
BspEI TCCGGA 2 cut(s) 2227, 5054
BspHI TCATGA 2 cut(s) 1057, 2314
BspMAI CTGCAG 9 cut(s) 2572, 2746, 3912, 4468, 5002, 5143, 5371, 5428, 5725
BspMI ACCTGC 1 cut(s) 4204
BspOI GCTAGC 1 cut(s) 5423
BspQI GCTCTTC 1 cut(s) 2266
BspT107I GGYRCC 2 cut(s) 3407, 3605
BspTNI GGTCTC 3 cut(s) 1262, 1901, 3513
BsrBI CCGCTC 1 cut(s) 533
BsrDI GCAATG 3 cut(s) 2623, 4355, 5168
BsrFI RCCGGY 2 cut(s) 760, 1955
BsrGI TGTACA 1 cut(s) 1652
BssAI RCCGGY 2 cut(s) 760, 1955
BssNI GRCGYC 1 cut(s) 5397
BssSI CACGAG 3 cut(s) 387, 3564, 4408
BssT1I CCWWGG 3 cut(s) 171, 1381, 2640
Bst2BI CACGAG 3 cut(s) 387, 3564, 4408
Bst6I CTCTTC 2 cut(s) 1035, 2266
BstACI GRCGYC 1 cut(s) 5397
BstAPI GCANNNNNTGC 3 cut(s) 3916, 5138, 5165
BstAUI TGTACA 1 cut(s) 1652
BstBAI YACGTR 1 cut(s) 3926
BstDSI CCRYGG 1 cut(s) 171
BstH2I RGCGCY 1 cut(s) 103
BstHHI GCGC 2 cut(s) 102, 3766
BstNSI RCATGY 6 cut(s) 1793, 1985, 2259, 2291, 4571, 5847
BstPAI GACNNNNGTC 1 cut(s) 57
BstSLI GKGCMC 1 cut(s) 3735
BstV2I GAAGAC 5 cut(s) 257, 1929, 2303, 2685, 3108
Bsu36I CCTNAGG 2 cut(s) 3526, 5505
BsuI GTATCC 3 cut(s) 2464, 4564, 4885
BsuRI GGCC 9 cut(s) 135, 470, 1769, 2130, 2865, 3531, 4295, 4346, 4847
BtgI CCRYGG 1 cut(s) 171
BtrI CACGTC 1 cut(s) 474
BtsI GCAGTG 8 cut(s) 994, 1243, 3733, 4631, 4818, 5628, 5694, 5802
BveI ACCTGC 1 cut(s) 4204
CciI TCATGA 2 cut(s) 1057, 2314
CfoI GCGC 2 cut(s) 102, 3766
Cfr10I RCCGGY 2 cut(s) 760, 1955
CseI GACGC 3 cut(s) 1173, 5405, 5718
CspAI ACCGGT 2 cut(s) 760, 1955
CspCI CAANNNNNGTGG 2 cut(s) 4632, 4667
DraI TTTAAA 1 cut(s) 1519
EaeI YGGCCR 1 cut(s) 2128
Eam1104I CTCTTC 2 cut(s) 1035, 2266
EarI CTCTTC 2 cut(s) 1035, 2266
EciI GGCGGA 1 cut(s) 463
Eco130I CCWWGG 3 cut(s) 171, 1381, 2640
Eco31I GGTCTC 3 cut(s) 1262, 1901, 3513
Eco32I GATATC 1 cut(s) 3418
Eco47I GGWCC 9 cut(s) 52, 1303, 2858, 3161, 4004, 4117, 4436, 4733, 5501
Eco47III AGCGCT 1 cut(s) 101
Eco81I CCTNAGG 2 cut(s) 3526, 5505
EcoO109I RGGNCCY 5 cut(s) 1303, 2864, 4004, 4294, 4436
EcoRI GAATTC 2 cut(s) 2086, 3859
EcoRV GATATC 1 cut(s) 3418
EcoT14I CCWWGG 3 cut(s) 171, 1381, 2640
EcoT22I ATGCAT 4 cut(s) 918, 2116, 2623, 5254
ErhI CCWWGG 3 cut(s) 171, 1381, 2640
FalI AAGNNNNNCTT 4 cut(s) 4887, 4919, 4926, 4958
FaqI GGGAC 4 cut(s) 3371, 4224, 4408, 4422
FauI CCCGC 1 cut(s) 538
FauNDI CATATG 2 cut(s) 259, 3997
FbaI TGATCA 8 cut(s) 805, 1321, 1729, 1960, 2932, 4147, 4882, 5625
FblI GTMKAC 2 cut(s) 2387, 3299
FspI TGCGCA 1 cut(s) 3765
GlaI GCGC 2 cut(s) 101, 3765
GsaI CCCAGC 2 cut(s) 1356, 5703
GsuI CTGGAG 7 cut(s) 228, 885, 1275, 1623, 2316, 3855, 5253
HaeII RGCGCY 1 cut(s) 103
HaeIII GGCC 9 cut(s) 135, 470, 1769, 2130, 2865, 3531, 4295, 4346, 4847
HapII CCGG 8 cut(s) 131, 136, 149, 681, 761, 1956, 2228, 5055
HgaI GACGC 3 cut(s) 1173, 5405, 5718
HhaI GCGC 2 cut(s) 102, 3766
Hin1I GRCGYC 1 cut(s) 5397
Hin6I GCGC 2 cut(s) 100, 3764
HinP1I GCGC 2 cut(s) 100, 3764
HincII GTYRAC 1 cut(s) 3300
HindII GTYRAC 1 cut(s) 3300
HindIII AAGCTT 1 cut(s) 4980
HpaII CCGG 8 cut(s) 131, 136, 149, 681, 761, 1956, 2228, 5055
Hpy166II GTNNAC 7 cut(s) 1444, 1653, 2388, 2981, 3300, 4160, 5808
Hpy8I GTNNAC 7 cut(s) 1444, 1653, 2388, 2981, 3300, 4160, 5808
HpyCH4IV ACGT 4 cut(s) 473, 2396, 2727, 3925
HpySE526I ACGT 4 cut(s) 473, 2396, 2727, 3925
Hsp92I GRCGYC 1 cut(s) 5397
HspAI GCGC 2 cut(s) 100, 3764
KflI GGGWCCC 1 cut(s) 4436
Kpn2I TCCGGA 2 cut(s) 2227, 5054
KpnI GGTACC 1 cut(s) 3609
Ksp22I TGATCA 8 cut(s) 805, 1321, 1729, 1960, 2932, 4147, 4882, 5625
LguI GCTCTTC 1 cut(s) 2266
MaeII ACGT 4 cut(s) 473, 2396, 2727, 3925
MbiI CCGCTC 1 cut(s) 533
MfeI CAATTG 1 cut(s) 235
MhlI GDGCHC 5 cut(s) 233, 437, 2102, 3735, 3931
MlsI TGGCCA 1 cut(s) 2130
MluNI TGGCCA 1 cut(s) 2130
MmeI TCCRAC 8 cut(s) 688, 2276, 2500, 2615, 3395, 4375, 5016, 5575
Mox20I TGGCCA 1 cut(s) 2130
Mph1103I ATGCAT 4 cut(s) 918, 2116, 2623, 5254
MroI TCCGGA 2 cut(s) 2227, 5054
MroXI GAANNNNTTC 2 cut(s) 525, 688
MscI TGGCCA 1 cut(s) 2130
MseI TTAA 6 cut(s) 500, 1518, 2117, 2345, 4086, 5547
MslI CAYNNNNRTG 4 cut(s) 93, 2554, 3771, 5848
Msp20I TGGCCA 1 cut(s) 2130
MspA1I CMGCKG 6 cut(s) 118, 4469, 5003, 5117, 5138, 5144
MspI CCGG 8 cut(s) 131, 136, 149, 681, 761, 1956, 2228, 5055
MunI CAATTG 1 cut(s) 235
Mva1269I GAATGC 5 cut(s) 1469, 3316, 4039, 4272, 5254
NciI CCSGG 1 cut(s) 132
NcoI CCATGG 1 cut(s) 171
NdeI CATATG 2 cut(s) 259, 3997
NheI GCTAGC 1 cut(s) 5419
NmeAIII GCCGAG 2 cut(s) 700, 4341
NmuCI GTSAC 9 cut(s) 10, 144, 1877, 2290, 2364, 2441, 3773, 4816, 5009
NsbI TGCGCA 1 cut(s) 3765
NsiI ATGCAT 4 cut(s) 918, 2116, 2623, 5254
NspI RCATGY 6 cut(s) 1793, 1985, 2259, 2291, 4571, 5847
PaeI GCATGC 2 cut(s) 1793, 4571
PagI TCATGA 2 cut(s) 1057, 2314
PaqCI CACCTGC 1 cut(s) 4204
PasI CCCWGGG 2 cut(s) 3736, 4440
PciI ACATGT 1 cut(s) 1981
PciSI GCTCTTC 1 cut(s) 2266
PctI GAATGC 5 cut(s) 1469, 3316, 4039, 4272, 5254
PdmI GAANNNNTTC 2 cut(s) 525, 688
PfoI TCCNGGA 2 cut(s) 1252, 5269
PinAI ACCGGT 2 cut(s) 760, 1955
Ppu21I YACGTR 1 cut(s) 3926
PpuMI RGGWCCY 3 cut(s) 1303, 4004, 4436
PscI ACATGT 1 cut(s) 1981
PshAI GACNNNNGTC 1 cut(s) 57
PshBI ATTAAT 1 cut(s) 4086
PsiI TTATAA 1 cut(s) 5678
Psp5II RGGWCCY 3 cut(s) 1303, 4004, 4436
PspFI CCCAGC 2 cut(s) 1352, 5699
PspPPI RGGWCCY 3 cut(s) 1303, 4004, 4436
PsrI GAACNNNNNNTAC 4 cut(s) 2721, 2753, 4150, 4182
PstI CTGCAG 9 cut(s) 2572, 2746, 3912, 4468, 5002, 5143, 5371, 5428, 5725
PvuII CAGCTG 5 cut(s) 118, 4469, 5003, 5138, 5144
RseI CAYNNNNRTG 4 cut(s) 93, 2554, 3771, 5848
SalI GTCGAC 1 cut(s) 3298
SapI GCTCTTC 1 cut(s) 2266
SaqAI TTAA 6 cut(s) 500, 1518, 2117, 2345, 4086, 5547
ScaI AGTACT 3 cut(s) 3785, 5181, 5236
SduI GDGCHC 5 cut(s) 233, 437, 2102, 3735, 3931
SinI GGWCC 9 cut(s) 52, 1303, 2858, 3161, 4004, 4117, 4436, 4733, 5501
SmiMI CAYNNNNRTG 4 cut(s) 93, 2554, 3771, 5848
SmlI CTYRAG 6 cut(s) 725, 1837, 3063, 4889, 5230, 5760
SmoI CTYRAG 6 cut(s) 725, 1837, 3063, 4889, 5230, 5760
SpeI ACTAGT 2 cut(s) 3830, 4790
SphI GCATGC 2 cut(s) 1793, 4571
SsiI CCGC 8 cut(s) 448, 531, 3315, 3342, 4262, 5112, 5115, 5156
StyI CCWWGG 3 cut(s) 171, 1381, 2640
TaiI ACGT 4 cut(s) 476, 2399, 2730, 3928
TaqI TCGA 5 cut(s) 104, 2799, 3299, 3365, 4204
TatI WGTACW 6 cut(s) 1652, 1667, 3783, 4502, 5179, 5234
TauI GCSGC 5 cut(s) 3317, 3345, 5114, 5117, 5159
Tru1I TTAA 6 cut(s) 500, 1518, 2117, 2345, 4086, 5547
Tru9I TTAA 6 cut(s) 500, 1518, 2117, 2345, 4086, 5547
TseFI GTSAC 9 cut(s) 10, 144, 1877, 2290, 2364, 2441, 3773, 4816, 5009
Tsp45I GTSAC 9 cut(s) 10, 144, 1877, 2290, 2364, 2441, 3773, 4816, 5009
TspGWI ACGGA 4 cut(s) 1859, 3041, 3631, 5577
VpaK11BI GGWCC 9 cut(s) 52, 1303, 2858, 3161, 4004, 4117, 4436, 4733, 5501
VspI ATTAAT 1 cut(s) 4086
XbaI TCTAGA 5 cut(s) 1402, 1618, 2065, 2072, 4694
XceI RCATGY 6 cut(s) 1793, 1985, 2259, 2291, 4571, 5847
XcmI CCANNNNNNNNNTGG 1 cut(s) 2981
XmiI GTMKAC 2 cut(s) 2387, 3299
XmnI GAANNNNTTC 2 cut(s) 525, 688
ZrmI AGTACT 3 cut(s) 3785, 5181, 5236
Zsp2I ATGCAT 4 cut(s) 918, 2116, 2623, 5254
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.