AT4G23750

Transcription factor

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Forward (+)
12376122 .. 12378032
1911 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G23750.1

Sequence Viewer

Length: 1032 bp
ATGGAAGCGGAGAAGAAAATGGTTCTACCGAGAATCAAATTCACAGAGCACAAAACCAACACGACAACAATCGTATCGGAGTTAACCAACACTCACCAAACCAGGATTCTTCGTATCTCAGTCACTGACCCAGACGCTACTGATTCCTCCAGTGACGACGAAGAAGAAGAACATCAACGCTTTGTCTCTAAACGCCGTCGTGTTAAGAAGTTTGTCAACGAAGTCTATCTCGATTCCGGTGCTGTTGTTACTGGTAGTTGTGGTCAAATGGAGTCGAAGAAGAGACAAAAGAGAGCGGTTAAATCGGAGTCTACTGTTTCTCCGGTTGTTTCAGCGACGACGACTACGACGGGAGAGAAGAAGTTCCGAGGAGTGAGACAGCGTCCATGGGGAAAATGGGCGGCGGAGATAAGAGATCCGTTGAAACGTGTACGGCTCTGGTTAGGTACTTACAACACGGCGGAAGAAGCTGCTATGGTTTACGATAACGCCGCTATTCAGCTTCGTGGTCCCGACGCTCTGACTAATTTCTCAGTCACTCCGACAACAGCGACGGAGAAGAAAGCCCCACCACCGTCTCCGGTGAAGAAGAAGAAGAAGAAAAACAACAAAAGCAAAAAATCCGTTACTGCTTCTTCCTCCATCAGCAGAAGCAGCAGCAACGATTGTCTCTGCTCTCCGGTGTCTGTTCTCCGATCTCCTTTCGCCGTCGACGAATTCTCCGGCATTTCTTCATCACCAGTCGCGGCCGTTGTAGTCAAGGAAGAGCCATCCATGACAACGGTATCTGAAACTTTCTCTGATTTCTCGGCGCCCTTGTTCTCAGATGATGACGTGTTCGATTTCCGGAGCTCAGTGGTTCCCGACTATCTCGGCGGCGATTTATTTGGGGAAGATCTATTCACGGCGGATATGTGTACGGATATGAACTTCGGATTCGATTTCGGATCCGGATTATCCAGCTGGCACATGGAGGACCATTTTCAAGATATCGGGGATCTATTCGGGTCGGATCCTCTTTTAGCTGTTTAA

Protein Analysis

343

Amino Acids

37.87

Weight (kDa)

6.27

Isoelectric Point (pI)

54.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AP2 PF00847 121 - 170 2.1e-13 AP2 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 811
AccBSI CCGCTC 1 cut(s) 296
AccI GTMKAC 2 cut(s) 311, 711
AccII CGCG 1 cut(s) 746
AccIII TCCGGA 2 cut(s) 846, 950
AciI CCGC 9 cut(s) 8, 296, 401, 404, 461, 492, 746, 876, 908
AclWI GGATC 6 cut(s) 410, 942, 955, 1005, 1007, 1020
AcoI YGGCCR 1 cut(s) 747
AcsI RAATTY 2 cut(s) 38, 716
AcyI GRCGYC 1 cut(s) 812
AfaI GTAC 3 cut(s) 432, 448, 919
AflIII ACRYGT 2 cut(s) 427, 834
AgsI TTSAA 2 cut(s) 424, 986
AjiI CACGTC 1 cut(s) 835
AjnI CCWGG 1 cut(s) 101
AjuI GAANNNNNNNTTGG 2 cut(s) 90, 122
AluBI AGCT 5 cut(s) 470, 502, 852, 963, 1025
AluI AGCT 5 cut(s) 470, 502, 852, 963, 1025
Alw21I GWGCWC 2 cut(s) 51, 854
Alw26I GTCTC 5 cut(s) 190, 277, 370, 582, 674
AlwI GGATC 6 cut(s) 410, 942, 955, 1005, 1007, 1020
AlwNI CAGNNNCTG 1 cut(s) 125
Aor13HI TCCGGA 2 cut(s) 846, 950
AoxI GGCC 1 cut(s) 747
ApeKI GCWGC 3 cut(s) 470, 654, 657
ApoI RAATTY 2 cut(s) 38, 716
Asp700I GAANNNNTTC 1 cut(s) 362
AspLEI GCGC 1 cut(s) 814
AspS9I GGNCC 2 cut(s) 509, 976
AsuHPI GGTGA 3 cut(s) 86, 595, 729
AvaII GGWCC 2 cut(s) 509, 976
BaeI ACNNNNGTAYC 4 cut(s) 57, 90, 768, 801
BamHI GGATCC 2 cut(s) 947, 1012
BanI GGYRCC 1 cut(s) 811
BanII GRGCYC 1 cut(s) 854
Bbv12I GWGCWC 2 cut(s) 51, 854
BbvI GCAGC 3 cut(s) 457, 666, 669
BccI CCATC 2 cut(s) 650, 778
BceAI ACGGC 6 cut(s) 180, 449, 474, 692, 734, 921
BcgI CGANNNNNNTGC 2 cut(s) 221, 255
BciT130I CCWGG 1 cut(s) 103
BcoDI GTCTC 5 cut(s) 190, 277, 370, 582, 674
BfoI RGCGCY 1 cut(s) 815
BglII AGATCT 1 cut(s) 895
BisI GCNGC 7 cut(s) 402, 471, 492, 655, 658, 747, 877
BlsI GCNGC 7 cut(s) 403, 472, 493, 656, 659, 748, 878
Bme1390I CCNGG 1 cut(s) 103
Bme18I GGWCC 2 cut(s) 509, 976
BmgBI CACGTC 1 cut(s) 835
BmgT120I GGNCC 2 cut(s) 509, 976
BmiI GGNNCC 5 cut(s) 511, 813, 861, 949, 1014
BmrFI CCNGG 1 cut(s) 103
BpmI CTGGAG 1 cut(s) 133
BsaHI GRCGYC 1 cut(s) 812
BsaJI CCNNGG 2 cut(s) 367, 386
BsaWI WCCGGW 6 cut(s) 236, 322, 580, 679, 846, 950
BsaXI ACNNNNNCTCC 4 cut(s) 304, 334, 704, 734
Bse1I ACTGG 3 cut(s) 150, 256, 740
BseAI TCCGGA 2 cut(s) 846, 950
BseBI CCWGG 1 cut(s) 103
BseDI CCNNGG 2 cut(s) 367, 386
BseGI GGATG 1 cut(s) 770
BseMII CTCAG 4 cut(s) 132, 546, 837, 867
BseNI ACTGG 3 cut(s) 150, 256, 740
BseRI GAGGAG 1 cut(s) 384
BseX3I CGGCCG 1 cut(s) 747
BseXI GCAGC 3 cut(s) 457, 666, 669
Bsh1236I CGCG 1 cut(s) 746
Bsh1285I CGRYCG 1 cut(s) 750
BshFI GGCC 1 cut(s) 749
BshNI GGYRCC 1 cut(s) 811
BsiEI CGRYCG 1 cut(s) 750
BsiHKAI GWGCWC 2 cut(s) 51, 854
BsiSI CCGG 7 cut(s) 237, 323, 581, 680, 723, 847, 951
BslFI GGGAC 1 cut(s) 495
BsmAI GTCTC 5 cut(s) 190, 277, 370, 582, 674
BsmBI CGTCTC 1 cut(s) 582
BsmFI GGGAC 1 cut(s) 495
BsnI GGCC 1 cut(s) 749
Bsp1286I GDGCHC 2 cut(s) 51, 854
Bsp13I TCCGGA 2 cut(s) 846, 950
Bsp143I GATC 6 cut(s) 415, 695, 895, 947, 997, 1012
Bsp19I CCATGG 1 cut(s) 386
BspACI CCGC 9 cut(s) 8, 296, 401, 404, 461, 492, 746, 876, 908
BspANI GGCC 1 cut(s) 749
BspCNI CTCAG 4 cut(s) 131, 545, 836, 866
BspEI TCCGGA 2 cut(s) 846, 950
BspFNI CGCG 1 cut(s) 746
BspLI GGNNCC 5 cut(s) 511, 813, 861, 949, 1014
BspPI GGATC 6 cut(s) 410, 942, 955, 1005, 1007, 1020
BspQI GCTCTTC 1 cut(s) 759
BspT107I GGYRCC 1 cut(s) 811
BsrBI CCGCTC 1 cut(s) 296
BsrI ACTGG 3 cut(s) 150, 256, 740
BssECI CCNNGG 2 cut(s) 367, 386
BssMI GATC 6 cut(s) 415, 695, 895, 947, 997, 1012
BssNI GRCGYC 1 cut(s) 812
BssT1I CCWWGG 1 cut(s) 386
Bst2UI CCWGG 1 cut(s) 103
Bst4CI ACNGT 3 cut(s) 316, 576, 784
Bst6I CTCTTC 2 cut(s) 275, 759
BstACI GRCGYC 1 cut(s) 812
BstC8I GCNNGC 1 cut(s) 965
BstDEI CTNAG 4 cut(s) 118, 532, 823, 853
BstDSI CCRYGG 1 cut(s) 386
BstF5I GGATG 1 cut(s) 770
BstFNI CGCG 1 cut(s) 746
BstH2I RGCGCY 1 cut(s) 815
BstHHI GCGC 1 cut(s) 814
BstKTI GATC 6 cut(s) 418, 698, 898, 950, 1000, 1015
BstMAI GTCTC 5 cut(s) 190, 277, 370, 582, 674
BstMBI GATC 6 cut(s) 415, 695, 895, 947, 997, 1012
BstMCI CGRYCG 1 cut(s) 750
BstMWI GCNNNNNNNGC 2 cut(s) 467, 654
BstNI CCWGG 1 cut(s) 103
BstSCI CCNGG 1 cut(s) 101
BstUI CGCG 1 cut(s) 746
BstV1I GCAGC 3 cut(s) 457, 666, 669
BstX2I RGATCY 5 cut(s) 415, 895, 947, 997, 1012
BstYI RGATCY 5 cut(s) 415, 895, 947, 997, 1012
BstZI CGGCCG 1 cut(s) 747
BsuRI GGCC 1 cut(s) 749
BtgI CCRYGG 1 cut(s) 386
BtrI CACGTC 1 cut(s) 835
BtsCI GGATG 1 cut(s) 770
BtsIMutI CAGTG 3 cut(s) 123, 157, 861
Cac8I GCNNGC 1 cut(s) 965
CaiI CAGNNNCTG 1 cut(s) 125
CfoI GCGC 1 cut(s) 814
Cfr13I GGNCC 2 cut(s) 509, 976
CseI GACGC 3 cut(s) 143, 371, 524
Csp6I GTAC 3 cut(s) 431, 447, 918
CviAII CATG 3 cut(s) 387, 775, 970
CviJI RGCY 9 cut(s) 436, 470, 502, 566, 749, 769, 852, 963, 1025
CviKI_1 RGCY 9 cut(s) 436, 470, 502, 566, 749, 769, 852, 963, 1025
CviQI GTAC 3 cut(s) 431, 447, 918
DdeI CTNAG 4 cut(s) 118, 532, 823, 853
DinI GGCGCC 1 cut(s) 813
DpnI GATC 6 cut(s) 417, 697, 897, 949, 999, 1014
DpnII GATC 6 cut(s) 415, 695, 895, 947, 997, 1012
EaeI YGGCCR 1 cut(s) 747
EagI CGGCCG 1 cut(s) 747
Eam1104I CTCTTC 2 cut(s) 275, 759
EarI CTCTTC 2 cut(s) 275, 759
EciI GGCGGA 3 cut(s) 419, 476, 923
Ecl136II GAGCTC 1 cut(s) 852
EclXI CGGCCG 1 cut(s) 747
Eco130I CCWWGG 1 cut(s) 386
Eco24I GRGCYC 1 cut(s) 854
Eco32I GATATC 1 cut(s) 991
Eco47I GGWCC 2 cut(s) 509, 976
Eco52I CGGCCG 1 cut(s) 747
Eco53kI GAGCTC 1 cut(s) 852
EcoICRI GAGCTC 1 cut(s) 852
EcoRI GAATTC 1 cut(s) 716
EcoRII CCWGG 1 cut(s) 101
EcoRV GATATC 1 cut(s) 991
EcoT14I CCWWGG 1 cut(s) 386
EcoT38I GRGCYC 1 cut(s) 854
EgeI GGCGCC 1 cut(s) 813
EheI GGCGCC 1 cut(s) 813
ErhI CCWWGG 1 cut(s) 386
Esp3I CGTCTC 1 cut(s) 582
FaeI CATG 3 cut(s) 390, 778, 973
FaiI YATR 6 cut(s) 388, 476, 776, 914, 926, 971
FaqI GGGAC 1 cut(s) 495
FatI CATG 3 cut(s) 386, 774, 969
FblI GTMKAC 2 cut(s) 311, 711
Fnu4HI GCNGC 7 cut(s) 402, 471, 492, 655, 658, 747, 877
FokI GGATG 1 cut(s) 757
FriOI GRGCYC 1 cut(s) 854
Fsp4HI GCNGC 7 cut(s) 402, 471, 492, 655, 658, 747, 877
GlaI GCGC 1 cut(s) 813
GluI GCNGC 7 cut(s) 402, 471, 492, 655, 658, 747, 877
GsuI CTGGAG 1 cut(s) 133
HaeII RGCGCY 1 cut(s) 815
HaeIII GGCC 1 cut(s) 749
HapII CCGG 7 cut(s) 237, 323, 581, 680, 723, 847, 951
HgaI GACGC 3 cut(s) 143, 371, 524
HhaI GCGC 1 cut(s) 814
Hin1I GRCGYC 1 cut(s) 812
Hin1II CATG 3 cut(s) 390, 778, 973
Hin6I GCGC 1 cut(s) 812
HinP1I GCGC 1 cut(s) 812
HincII GTYRAC 3 cut(s) 84, 217, 712
HindII GTYRAC 3 cut(s) 84, 217, 712
HinfI GANTC 7 cut(s) 33, 106, 143, 233, 272, 308, 936
HpaI GTTAAC 1 cut(s) 84
HpaII CCGG 7 cut(s) 237, 323, 581, 680, 723, 847, 951
HphI GGTGA 3 cut(s) 86, 595, 729
Hpy166II GTNNAC 7 cut(s) 84, 217, 312, 431, 481, 712, 918
Hpy188III TCNNGA 6 cut(s) 230, 512, 847, 863, 951, 986
Hpy8I GTNNAC 7 cut(s) 84, 217, 312, 431, 481, 712, 918
Hpy99I CGWCG 9 cut(s) 161, 201, 340, 343, 352, 518, 556, 713, 716
HpyCH4III ACNGT 3 cut(s) 316, 576, 784
HpyCH4IV ACGT 2 cut(s) 427, 834
HpyF10VI GCNNNNNNNGC 2 cut(s) 467, 654
HpyF3I CTNAG 4 cut(s) 118, 532, 823, 853
HpySE526I ACGT 2 cut(s) 427, 834
Hsp92I GRCGYC 1 cut(s) 812
Hsp92II CATG 3 cut(s) 390, 778, 973
HspAI GCGC 1 cut(s) 812
KasI GGCGCC 1 cut(s) 811
Kpn2I TCCGGA 2 cut(s) 846, 950
KspAI GTTAAC 1 cut(s) 84
Kzo9I GATC 6 cut(s) 415, 695, 895, 947, 997, 1012
LguI GCTCTTC 1 cut(s) 759
LmnI GCTCC 1 cut(s) 849
Lsp1109I GCAGC 3 cut(s) 457, 666, 669
MaeII ACGT 2 cut(s) 427, 834
MaeIII GTNAC 5 cut(s) 121, 152, 247, 535, 625
MalI GATC 6 cut(s) 417, 697, 897, 949, 999, 1014
MbiI CCGCTC 1 cut(s) 296
MboI GATC 6 cut(s) 415, 695, 895, 947, 997, 1012
MflI RGATCY 5 cut(s) 415, 895, 947, 997, 1012
MhlI GDGCHC 2 cut(s) 51, 854
MluCI AATT 3 cut(s) 38, 526, 716
Mly113I GGCGCC 1 cut(s) 812
MlyI GAGTC 2 cut(s) 281, 317
MmeI TCCRAC 2 cut(s) 566, 990
MnlI CCTC 5 cut(s) 157, 362, 649, 967, 1026
MroI TCCGGA 2 cut(s) 846, 950
MroXI GAANNNNTTC 1 cut(s) 362
MseI TTAA 4 cut(s) 83, 204, 300, 1030
MspA1I CMGCKG 1 cut(s) 963
MspI CCGG 7 cut(s) 237, 323, 581, 680, 723, 847, 951
MspR9I CCNGG 1 cut(s) 103
MvaI CCWGG 1 cut(s) 103
MvnI CGCG 1 cut(s) 746
MwoI GCNNNNNNNGC 2 cut(s) 467, 654
NarI GGCGCC 1 cut(s) 812
NcoI CCATGG 1 cut(s) 386
NdeII GATC 6 cut(s) 415, 695, 895, 947, 997, 1012
NlaIII CATG 3 cut(s) 390, 778, 973
NlaIV GGNNCC 5 cut(s) 511, 813, 861, 949, 1014
NmeAIII GCCGAG 2 cut(s) 788, 852
NmuCI GTSAC 3 cut(s) 121, 152, 535
PciSI GCTCTTC 1 cut(s) 759
PcsI WCGNNNNNNNCGW 2 cut(s) 344, 711
PdmI GAANNNNTTC 1 cut(s) 362
PfeI GAWTC 5 cut(s) 33, 106, 143, 233, 936
PflFI GACNNNGTC 1 cut(s) 381
PkrI GCNGC 7 cut(s) 403, 472, 493, 656, 659, 748, 878
PleI GAGTC 2 cut(s) 280, 316
PluTI GGCGCC 1 cut(s) 815
PpsI GAGTC 2 cut(s) 280, 316
Psp124BI GAGCTC 1 cut(s) 854
Psp6I CCWGG 1 cut(s) 101
PspGI CCWGG 1 cut(s) 101
PspN4I GGNNCC 5 cut(s) 511, 813, 861, 949, 1014
PspPI GGNCC 2 cut(s) 509, 976
PstNI CAGNNNCTG 1 cut(s) 125
PsuI RGATCY 5 cut(s) 415, 895, 947, 997, 1012
PsyI GACNNNGTC 1 cut(s) 381
PvuII CAGCTG 1 cut(s) 963
RsaI GTAC 3 cut(s) 432, 448, 919
RsaNI GTAC 3 cut(s) 431, 447, 918
SacI GAGCTC 1 cut(s) 854
SalI GTCGAC 1 cut(s) 710
SapI GCTCTTC 1 cut(s) 759
SaqAI TTAA 4 cut(s) 83, 204, 300, 1030
SatI GCNGC 7 cut(s) 402, 471, 492, 655, 658, 747, 877
Sau3AI GATC 6 cut(s) 415, 695, 895, 947, 997, 1012
Sau96I GGNCC 2 cut(s) 509, 976
SchI GAGTC 2 cut(s) 281, 317
ScrFI CCNGG 1 cut(s) 103
SduI GDGCHC 2 cut(s) 51, 854
SetI ASST 8 cut(s) 430, 448, 472, 504, 837, 854, 965, 1027
SfoI GGCGCC 1 cut(s) 813
SgrDI CGTCGACG 1 cut(s) 710
SinI GGWCC 2 cut(s) 509, 976
Sse9I AATT 3 cut(s) 38, 526, 716
SsiI CCGC 9 cut(s) 8, 296, 401, 404, 461, 492, 746, 876, 908
SspDI GGCGCC 1 cut(s) 811
SstI GAGCTC 1 cut(s) 854
StyD4I CCNGG 1 cut(s) 101
StyI CCWWGG 1 cut(s) 386
TaaI ACNGT 3 cut(s) 316, 576, 784
TaiI ACGT 2 cut(s) 430, 837
TaqI TCGA 5 cut(s) 231, 275, 711, 840, 939
TasI AATT 3 cut(s) 38, 526, 716
TauI GCSGC 4 cut(s) 404, 494, 749, 879
TfiI GAWTC 5 cut(s) 33, 106, 143, 233, 936
Tru1I TTAA 4 cut(s) 83, 204, 300, 1030
Tru9I TTAA 4 cut(s) 83, 204, 300, 1030
TscAI CASTG 3 cut(s) 130, 157, 861
TseFI GTSAC 3 cut(s) 121, 152, 535
TseI GCWGC 3 cut(s) 470, 654, 657
Tsp45I GTSAC 3 cut(s) 121, 152, 535
TspDTI ATGAA 2 cut(s) 723, 941
TspGWI ACGGA 4 cut(s) 408, 569, 613, 935
TspRI CASTG 3 cut(s) 130, 157, 861
Tth111I GACNNNGTC 1 cut(s) 381
VpaK11BI GGWCC 2 cut(s) 509, 976
XapI RAATTY 2 cut(s) 38, 716
XcmI CCANNNNNNNNNTGG 2 cut(s) 393, 967
XmiI GTMKAC 2 cut(s) 311, 711
XmnI GAANNNNTTC 1 cut(s) 362
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.