Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002285

Physical Location & Seq

Genomic Coordinates Forward (+)

12629951 .. 12633132

Gene Structure 3182 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G24430.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1941 bp

ATGTCGAACCAAGATTCTGTTCAGTTGGATGTCCAAGAAAGCCATGTGGTCATGGGAAATGGTAAAGTGAAAGTGACCATATCAAAACCAGATGGTTTTGTTACCGGAATCTCTTACCAGGGCGTCGACAATCTACTAGAAACTCACAACGAAGATTTCAATCGAGGGTACTGGGACCTTGTTTGGAGCGATGAAGGGACGCCTGGAACCACAGGGAAATCCGAGCGGATCAAAGGCACAAGTTTTGAAGTAGTAGTGGAAAATGAAGAGCTGGTAGAAATTTCCTTCTCAAGGAAATGGGATTCTTCTCTCCAAGACAGTATTGCTCCTATTAATGTTGACAAGAGGTTCATAATGCGTAAAGATGTAACTGGATTCTACTCATATGCGATATTTGAGCATCTAGCGGAATGGCCAGCTTTTAACTTGCCTCAGACAAGGATTGTCTACAAGCTTCGTAAAGACAAGTTTAAATATATGGCGATTGCTGATAACAGGCAGAGGAAAATGCCACTTCCAGAGGATAGATTGGGGAAAAGAGGAAGACCTTTGGCTTATCCTGAAGCTGTTCTTCTTGTTCATCCTGTTGAAGACGAGTTTAAAGGAGAGGTTGATGACAAGTATGAGTATTCAAGTGAGAACAAAGATCTGAAAGTGCATGGATGGATCTCACATAACTTGGATTTGGGTTGCTGGCAAATCATTCCTAGCAATGAGTTCAGATCAGGTGGCTTGTCCAAACAGAACCTTACTTCTCATGTTGGTCCCATCAGTCTTGCTATGTTTTTGAGTGCTCACTACGCGGGTGAGGATATGGTGATGAAGGTGAAAGCAGGGGACTCATGGAAGAAAGTGTTTGGTCCTGTCTTTACTTACCTCAATTGCTTGCCTGACAAAACCTCTGACCCTCTTTCGCTATGGCAAGACGCTAAAAACCAGATGTTAACTGAAGTCCAAAGCTGGCCTTACGATTTCCCTGCTTCAGAAGACTTTCCAGTGTCCGATAAGCGCGGTTGCATCAGCGGTAGATTACTAGTATGCGACAAATTTCTTAGTGATGATTTTTTACCAGCAAATGGTGCTTTCGTAGGGTTGGCTCCACCAGGAGAGGTTGGATCCTGGCAATTAGAATCTAAGGGATATCAATTCTGGACAGAAGCAGATTCTGATGGTTATTTCGCGATAAATGATATCCGAGAAGGCGAGTATAATCTCAATGGTTATGTGACAGGATGGATAGGAGACTATCAATACGAACAATTGATTAACATTACTGCAGGCTGCGACATTGACGTTGGCAATATCGTGTATGAACCGCCCCGAGATGGGCCAACAGTGTGGGAAATAGGGATACCTGACCGGTCTGCAGCTGAGTTCTTTGTTCCAGACCCAAATCCCAAATACATCAACAAACTATATATTGGTCATCCTGATAGGTTTAGGCAATACGGGCTATGGGAAAGATACACAGAACTATATCCTAAGGAAGATTTGGTGTTCACCATTGGCGTCAGTGATTACAAAAAAGATTGGTTCTTTGCACACGTTACCAGGAAAATGGGAGATGATACATATCAGAAAACAACATGGCAAATCAAGTTCAAGCTAGAGAATGTACAGAAAAGTTGCACATACAAAATCCGGATCGCGCTAGCAACTGCAAATGTAGCAGAATTACAGGTGAGGATGAATGATGATGACACAGAAAAGACTACTCCTATATTCACAACGGGTGTAATCGGGCACGATAACGCGATTGCAAGACATGGGATACATGGAATCTATAGGCTTTATAATGTGGATGTACCAAGTGAGAAGCTTGTGGAAGGAGACAACACTTTGTTCTTGACACAAACCATGACCACCACTGGAGCCTTTAATGGTCTCATGTATGACTATATCCGCCTCGAAGGACCTCCTTTAGATTCATACTCTCACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CBM-like Rhamnogal_lyase fn3_3

Protein Analysis

646

Amino Acids

73.61

Weight (kDa)

5.04

Isoelectric Point (pI)

29.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rhamnogal_lyase	PF06045	2 - 204	8.2e-107	Rhamnogalacturonate lyase family
fn3_3	PF14686	359 - 431	4.4e-24	Polysaccharide lyase family 4, domain II
CBM-like	PF14683	445 - 636	2.8e-51	Polysaccharide lyase family 4, domain III

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002285)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24430 AT4G24430
fragaria_vesca	FvH4_5g34131 FvH4_5g34131 FvH4_5g34131 FvH4_5g34131 FvH4_5g34150
malus_domestica	MD08G1204400.v1.1 MD08G1205000.v1.1
prunus_persica	Prupe.1G536600_v2.0.a1 Prupe.1G536600_v2.0.a1 Prupe.1G536600_v2.0.a1 Prupe.1G536700_v2.0.a1 Prupe.1G536700_v2.0.a1
pyrus_communis	pycom08g17670 pycom08g17720
rosa_chinensis	RchiOBHm_Chr7g0233711 RchiOBHm_Chr7g0233721 RchiOBHm_Chr7g0233731 RchiOBHm_Chr7g0233741
rosa_laevigata	RLG00000001237 RLG00000001239 RLG00000001240
rosa_multiflora	Rmu_sc0000740.1_g000047 Rmu_sc0000740.1_g000058 Rmu_sc0010145.1_g000001 Rmu_sc0011583.1_g000004
rosa_roxburghii	Rroxscaffold_3G00227030 Rroxscaffold_3G00227050 Rroxscaffold_3G00227070
rosa_rugosa	Rorug07G0282300 Rorug07G0282300
rosa_samantha	Rh7AG438600 Rh7AG438700 Rh7BG411300 Rh7CG458200 Rh7CG458300 Rh7CG458400 Rh7DG428200
rosa_wichuraiana	Rw7G036170 Rw7G036180 Rw7G036230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1794
AccB7I	CCANNNNNTGG	1 cut(s)	1076
AccBSI	CCGCTC	1 cut(s)	226
AccI	GTMKAC	2 cut(s)	126, 447
AccII	CGCG	5 cut(s)	803, 1011, 1181, 1649, 1754
AccIII	TCCGGA	1 cut(s)	1641
AciI	CCGC	7 cut(s)	226, 407, 803, 1011, 1023, 1316, 1903
AclWI	GGATC	5 cut(s)	236, 674, 1110, 1123, 1652
AcoI	YGGCCR	1 cut(s)	413
AcsI	RAATTY	2 cut(s)	279, 1046
AcuI	CTGAAG	3 cut(s)	582, 966, 969
AcyI	GRCGYC	3 cut(s)	123, 200, 1509
AfaI	GTAC	3 cut(s)	170, 1617, 1806
AfiI	CCNNNNNNNGG	4 cut(s)	291, 1076, 1325, 1326
AflIII	ACRYGT	1 cut(s)	1543
AgeI	ACCGGT	1 cut(s)	1359
AgsI	TTSAA	5 cut(s)	160, 248, 590, 633, 1603
AhlI	ACTAGT	1 cut(s)	1033
AjnI	CCWGG	5 cut(s)	117, 202, 1102, 1118, 1550
AjuI	GAANNNNNNNTTGG	1 cut(s)	35
AluBI	AGCT	8 cut(s)	271, 419, 454, 566, 960, 1370, 1606, 1819
AluI	AGCT	8 cut(s)	271, 419, 454, 566, 960, 1370, 1606, 1819
Alw21I	GWGCWC	1 cut(s)	796
Alw26I	GTCTC	3 cut(s)	1236, 1824, 1889
AlwI	GGATC	5 cut(s)	236, 674, 1110, 1123, 1652
AlwNI	CAGNNNCTG	1 cut(s)	1166
Ama87I	CYCGRG	1 cut(s)	1320
Aor13HI	TCCGGA	1 cut(s)	1641
AoxI	GGCC	3 cut(s)	413, 962, 1328
ApeKI	GCWGC	2 cut(s)	1281, 1367
ApoI	RAATTY	2 cut(s)	279, 1046
AseI	ATTAAT	1 cut(s)	333
AsiGI	ACCGGT	1 cut(s)	1359
Asp700I	GAANNNNTTC	2 cut(s)	567, 990
AspLEI	GCGC	2 cut(s)	1011, 1651
AspS9I	GGNCC	5 cut(s)	175, 764, 860, 1328, 1913
AsuHPI	GGTGA	5 cut(s)	818, 829, 838, 1492, 1693
AsuNHI	GCTAGC	1 cut(s)	1651
AvaI	CYCGRG	1 cut(s)	1320
AvaII	GGWCC	4 cut(s)	175, 764, 860, 1913
AxyI	CCTNAGG	1 cut(s)	1482
BaeGI	GKGCMC	1 cut(s)	1746
BalI	TGGCCA	1 cut(s)	415
BamHI	GGATCC	1 cut(s)	1115
BbsI	GAAGAC	3 cut(s)	550, 597, 993
Bbv12I	GWGCWC	1 cut(s)	796
BbvI	GCAGC	2 cut(s)	1268, 1379
BccI	CCATC	6 cut(s)	86, 657, 776, 1163, 1227, 1319
BcgI	CGANNNNNNTGC	2 cut(s)	959, 993
BciT130I	CCWGG	5 cut(s)	119, 204, 1104, 1120, 1552
BciVI	GTATCC	2 cut(s)	1344, 1764
BcoDI	GTCTC	3 cut(s)	1236, 1824, 1889
BcuI	ACTAGT	1 cut(s)	1033
BfaI	CTAG	7 cut(s)	137, 404, 708, 1034, 1607, 1652, 1939
BfmI	CTRYAG	3 cut(s)	1275, 1365, 1783
BfuI	GTATCC	2 cut(s)	1344, 1764
BglII	AGATCT	1 cut(s)	646
BisI	GCNGC	2 cut(s)	1282, 1368
BlsI	GCNGC	2 cut(s)	1283, 1369
Bme1390I	CCNGG	5 cut(s)	119, 204, 1104, 1120, 1552
Bme18I	GGWCC	4 cut(s)	175, 764, 860, 1913
BmeT110I	CYCGRG	1 cut(s)	1320
BmgT120I	GGNCC	5 cut(s)	175, 764, 860, 1328, 1913
BmiI	GGNNCC	6 cut(s)	176, 208, 766, 1098, 1117, 1873
BmrFI	CCNGG	5 cut(s)	119, 204, 1104, 1120, 1552
BmrI	ACTGGG	1 cut(s)	181
BmsI	GCATC	2 cut(s)	409, 1026
BmtI	GCTAGC	1 cut(s)	1655
BmuI	ACTGGG	1 cut(s)	181
BpiI	GAAGAC	3 cut(s)	550, 597, 993
BpmI	CTGGAG	1 cut(s)	1890
BpuEI	CTTGAG	1 cut(s)	274
BsaBI	GATNNNNATC	2 cut(s)	159, 1572
BsaHI	GRCGYC	3 cut(s)	123, 200, 1509
BsaI	GGTCTC	1 cut(s)	1889
BsaJI	CCNNGG	1 cut(s)	118
BsaWI	WCCGGW	3 cut(s)	104, 1359, 1641
Bsc4I	CCNNNNNNNGG	4 cut(s)	291, 1076, 1325, 1326
Bse118I	RCCGGY	1 cut(s)	1359
Bse1I	ACTGG	4 cut(s)	176, 376, 995, 1873
Bse21I	CCTNAGG	1 cut(s)	1482
Bse3DI	GCAATG	1 cut(s)	718
Bse8I	GATNNNNATC	2 cut(s)	159, 1572
BseAI	TCCGGA	1 cut(s)	1641
BseBI	CCWGG	5 cut(s)	119, 204, 1104, 1120, 1552
BseDI	CCNNGG	1 cut(s)	118
BseGI	GGATG	7 cut(s)	34, 580, 668, 1238, 1426, 1692, 1807
BseJI	GATNNNNATC	2 cut(s)	159, 1572
BseLI	CCNNNNNNNGG	4 cut(s)	291, 1076, 1325, 1326
BseMI	GCAATG	1 cut(s)	718
BseMII	CTCAG	2 cut(s)	446, 1362
BseNI	ACTGG	4 cut(s)	176, 376, 995, 1873
BseSI	GKGCMC	1 cut(s)	1746
BseXI	GCAGC	2 cut(s)	1268, 1379
Bsh1236I	CGCG	5 cut(s)	803, 1011, 1181, 1649, 1754
BshFI	GGCC	3 cut(s)	415, 964, 1330
BshTI	ACCGGT	1 cut(s)	1359
BsiHKAI	GWGCWC	1 cut(s)	796
BsiHKCI	CYCGRG	1 cut(s)	1320
BsiSI	CCGG	3 cut(s)	105, 1360, 1642
BslFI	GGGAC	4 cut(s)	188, 211, 750, 851
BslI	CCNNNNNNNGG	4 cut(s)	291, 1076, 1325, 1326
BsmAI	GTCTC	3 cut(s)	1236, 1824, 1889
BsmFI	GGGAC	4 cut(s)	188, 211, 750, 851
BsnI	GGCC	3 cut(s)	415, 964, 1330
Bso31I	GGTCTC	1 cut(s)	1889
BsoBI	CYCGRG	1 cut(s)	1320
Bsp1286I	GDGCHC	2 cut(s)	796, 1746
Bsp13I	TCCGGA	1 cut(s)	1641
Bsp1407I	TGTACA	1 cut(s)	1615
Bsp143I	GATC	6 cut(s)	228, 646, 666, 722, 1115, 1644
Bsp68I	TCGCGA	1 cut(s)	1181
BspACI	CCGC	7 cut(s)	226, 407, 803, 1011, 1023, 1316, 1903
BspANI	GGCC	3 cut(s)	415, 964, 1330
BspCNI	CTCAG	2 cut(s)	445, 1363
BspEI	TCCGGA	1 cut(s)	1641
BspFNI	CGCG	5 cut(s)	803, 1011, 1181, 1649, 1754
BspLI	GGNNCC	6 cut(s)	176, 208, 766, 1098, 1117, 1873
BspMAI	CTGCAG	2 cut(s)	1279, 1369
BspOI	GCTAGC	1 cut(s)	1655
BspPI	GGATC	5 cut(s)	236, 674, 1110, 1123, 1652
BspQI	GCTCTTC	1 cut(s)	261
BspTNI	GGTCTC	1 cut(s)	1889
BsrBI	CCGCTC	1 cut(s)	226
BsrDI	GCAATG	1 cut(s)	718
BsrFI	RCCGGY	1 cut(s)	1359
BsrGI	TGTACA	1 cut(s)	1615
BsrI	ACTGG	4 cut(s)	176, 376, 995, 1873
BssAI	RCCGGY	1 cut(s)	1359
BssECI	CCNNGG	1 cut(s)	118
BssMI	GATC	6 cut(s)	228, 646, 666, 722, 1115, 1644
BssNI	GRCGYC	3 cut(s)	123, 200, 1509
Bst2UI	CCWGG	5 cut(s)	119, 204, 1104, 1120, 1552
Bst4CI	ACNGT	2 cut(s)	320, 1336
Bst6I	CTCTTC	1 cut(s)	261
BstACI	GRCGYC	3 cut(s)	123, 200, 1509
BstAPI	GCANNNNNTGC	1 cut(s)	1079
BstAUI	TGTACA	1 cut(s)	1615
BstC8I	GCNNGC	6 cut(s)	417, 695, 887, 962, 1279, 1653
BstDEI	CTNAG	5 cut(s)	432, 1052, 1134, 1371, 1482
BstENI	CCTNNNNNAGG	1 cut(s)	289
BstF5I	GGATG	7 cut(s)	34, 580, 668, 1238, 1426, 1692, 1807
BstFNI	CGCG	5 cut(s)	803, 1011, 1181, 1649, 1754
BstHHI	GCGC	2 cut(s)	1011, 1651
BstKTI	GATC	6 cut(s)	231, 649, 669, 725, 1118, 1647
BstMAI	GTCTC	3 cut(s)	1236, 1824, 1889
BstMBI	GATC	6 cut(s)	228, 646, 666, 722, 1115, 1644
BstMWI	GCNNNNNNNGC	4 cut(s)	800, 1079, 1450, 1667
BstNI	CCWGG	5 cut(s)	119, 204, 1104, 1120, 1552
BstSCI	CCNGG	5 cut(s)	117, 202, 1102, 1118, 1550
BstSFI	CTRYAG	3 cut(s)	1275, 1365, 1783
BstSLI	GKGCMC	1 cut(s)	1746
BstUI	CGCG	5 cut(s)	803, 1011, 1181, 1649, 1754
BstV1I	GCAGC	2 cut(s)	1268, 1379
BstV2I	GAAGAC	3 cut(s)	550, 597, 993
BstX2I	RGATCY	3 cut(s)	646, 666, 1115
BstXI	CCANNNNNNTGG	2 cut(s)	1338, 1558
BstYI	RGATCY	3 cut(s)	646, 666, 1115
Bsu36I	CCTNAGG	1 cut(s)	1482
BsuI	GTATCC	2 cut(s)	1344, 1764
BsuRI	GGCC	3 cut(s)	415, 964, 1330
BtgZI	GCGATG	1 cut(s)	204
BtsCI	GGATG	7 cut(s)	34, 580, 668, 1238, 1426, 1692, 1807
BtsIMutI	CAGTG	4 cut(s)	1002, 1341, 1519, 1866
BtuMI	TCGCGA	1 cut(s)	1181
Cac8I	GCNNGC	6 cut(s)	417, 695, 887, 962, 1279, 1653
CaiI	CAGNNNCTG	1 cut(s)	1166
CfoI	GCGC	2 cut(s)	1011, 1651
Cfr10I	RCCGGY	1 cut(s)	1359
Cfr13I	GGNCC	5 cut(s)	175, 764, 860, 1328, 1913
CseI	GACGC	4 cut(s)	112, 208, 935, 1498
Csp6I	GTAC	3 cut(s)	169, 1616, 1805
CspAI	ACCGGT	1 cut(s)	1359
CviQI	GTAC	3 cut(s)	169, 1616, 1805
DdeI	CTNAG	5 cut(s)	432, 1052, 1134, 1371, 1482
DpnI	GATC	6 cut(s)	230, 648, 668, 724, 1117, 1646
DpnII	GATC	6 cut(s)	228, 646, 666, 722, 1115, 1644
DraI	TTTAAA	2 cut(s)	472, 601
EaeI	YGGCCR	1 cut(s)	413
Eam1104I	CTCTTC	1 cut(s)	261
EarI	CTCTTC	1 cut(s)	261
EciI	GGCGGA	1 cut(s)	1892
Eco31I	GGTCTC	1 cut(s)	1889
Eco32I	GATATC	2 cut(s)	1142, 1192
Eco47I	GGWCC	4 cut(s)	175, 764, 860, 1913
Eco57I	CTGAAG	3 cut(s)	582, 966, 969
Eco81I	CCTNAGG	1 cut(s)	1482
Eco88I	CYCGRG	1 cut(s)	1320
EcoNI	CCTNNNNNAGG	1 cut(s)	289
EcoO109I	RGGNCCY	2 cut(s)	175, 1913
EcoRII	CCWGG	5 cut(s)	117, 202, 1102, 1118, 1550
EcoRV	GATATC	2 cut(s)	1142, 1192
FalI	AAGNNNNNCTT	4 cut(s)	555, 587, 949, 981
FaqI	GGGAC	4 cut(s)	188, 211, 750, 851
FauI	CCCGC	1 cut(s)	796
FauNDI	CATATG	1 cut(s)	385
FblI	GTMKAC	2 cut(s)	126, 447
Fnu4HI	GCNGC	2 cut(s)	1282, 1368
FokI	GGATG	7 cut(s)	41, 567, 675, 1245, 1413, 1699, 1814
Fsp4HI	GCNGC	2 cut(s)	1282, 1368
FspBI	CTAG	7 cut(s)	137, 404, 708, 1034, 1607, 1652, 1939
GlaI	GCGC	2 cut(s)	1010, 1650
GluI	GCNGC	2 cut(s)	1282, 1368
GsuI	CTGGAG	1 cut(s)	1890
HaeIII	GGCC	3 cut(s)	415, 964, 1330
HapII	CCGG	3 cut(s)	105, 1360, 1642
HgaI	GACGC	4 cut(s)	112, 208, 935, 1498
HhaI	GCGC	2 cut(s)	1011, 1651
Hin1I	GRCGYC	3 cut(s)	123, 200, 1509
Hin6I	GCGC	2 cut(s)	1009, 1649
HinP1I	GCGC	2 cut(s)	1009, 1649
HincII	GTYRAC	3 cut(s)	127, 340, 945
HindII	GTYRAC	3 cut(s)	127, 340, 945
HindIII	AAGCTT	2 cut(s)	452, 1817
HinfI	GANTC	9 cut(s)	14, 108, 302, 375, 839, 1130, 1163, 1779, 1925
HpaI	GTTAAC	1 cut(s)	945
HpaII	CCGG	3 cut(s)	105, 1360, 1642
HphI	GGTGA	5 cut(s)	818, 829, 838, 1492, 1693
Hpy166II	GTNNAC	5 cut(s)	127, 340, 448, 945, 1500
Hpy188III	TCNNGA	8 cut(s)	518, 560, 1150, 1180, 1385, 1430, 1642, 1846
Hpy8I	GTNNAC	5 cut(s)	127, 340, 448, 945, 1500
Hpy99I	CGWCG	1 cut(s)	128
HpyAV	CCTTC	6 cut(s)	188, 295, 817, 1193, 1820, 1904
HpyCH4III	ACNGT	2 cut(s)	320, 1336
HpyCH4IV	ACGT	2 cut(s)	1293, 1545
HpyCH4V	TGCA	8 cut(s)	658, 1017, 1277, 1367, 1541, 1629, 1661, 1760
HpyF10VI	GCNNNNNNNGC	4 cut(s)	800, 1079, 1450, 1667
HpyF3I	CTNAG	5 cut(s)	432, 1052, 1134, 1371, 1482
HpySE526I	ACGT	2 cut(s)	1293, 1545
Hsp92I	GRCGYC	3 cut(s)	123, 200, 1509
HspAI	GCGC	2 cut(s)	1009, 1649
Kpn2I	TCCGGA	1 cut(s)	1641
KspAI	GTTAAC	1 cut(s)	945
Kzo9I	GATC	6 cut(s)	228, 646, 666, 722, 1115, 1644
LguI	GCTCTTC	1 cut(s)	261
LmnI	GCTCC	4 cut(s)	186, 331, 1102, 1871
Lsp1109I	GCAGC	2 cut(s)	1268, 1379
LweI	GCATC	2 cut(s)	409, 1026
MaeI	CTAG	7 cut(s)	137, 404, 708, 1034, 1607, 1652, 1939
MaeII	ACGT	2 cut(s)	1293, 1545
MaeIII	GTNAC	5 cut(s)	73, 100, 367, 1225, 1546
MalI	GATC	6 cut(s)	230, 648, 668, 724, 1117, 1646
MbiI	CCGCTC	1 cut(s)	226
MboI	GATC	6 cut(s)	228, 646, 666, 722, 1115, 1644
MboII	GAAGA	9 cut(s)	164, 278, 297, 555, 563, 602, 859, 998, 1499
MfeI	CAATTG	2 cut(s)	880, 1259
MflI	RGATCY	3 cut(s)	646, 666, 1115
MhlI	GDGCHC	2 cut(s)	796, 1746
MlsI	TGGCCA	1 cut(s)	415
MluCI	AATT	7 cut(s)	279, 880, 1046, 1124, 1145, 1259, 1673
MluNI	TGGCCA	1 cut(s)	415
MlyI	GAGTC	1 cut(s)	833
MmeI	TCCRAC	2 cut(s)	6, 1093
Mox20I	TGGCCA	1 cut(s)	415
MroI	TCCGGA	1 cut(s)	1641
MroXI	GAANNNNTTC	2 cut(s)	567, 990
MscI	TGGCCA	1 cut(s)	415
MseI	TTAA	7 cut(s)	333, 423, 471, 600, 944, 1266, 1878
Msp20I	TGGCCA	1 cut(s)	415
MspA1I	CMGCKG	2 cut(s)	1023, 1370
MspI	CCGG	3 cut(s)	105, 1360, 1642
MspR9I	CCNGG	5 cut(s)	119, 204, 1104, 1120, 1552
MunI	CAATTG	2 cut(s)	880, 1259
MvaI	CCWGG	5 cut(s)	119, 204, 1104, 1120, 1552
MvnI	CGCG	5 cut(s)	803, 1011, 1181, 1649, 1754
MwoI	GCNNNNNNNGC	4 cut(s)	800, 1079, 1450, 1667
NdeI	CATATG	1 cut(s)	385
NdeII	GATC	6 cut(s)	228, 646, 666, 722, 1115, 1644
NheI	GCTAGC	1 cut(s)	1651
NlaIV	GGNNCC	6 cut(s)	176, 208, 766, 1098, 1117, 1873
NmuCI	GTSAC	2 cut(s)	73, 1225
NruI	TCGCGA	1 cut(s)	1181
PciSI	GCTCTTC	1 cut(s)	261
PdmI	GAANNNNTTC	2 cut(s)	567, 990
PfeI	GAWTC	8 cut(s)	14, 108, 302, 375, 1130, 1163, 1779, 1925
PflMI	CCANNNNNTGG	1 cut(s)	1076
PinAI	ACCGGT	1 cut(s)	1359
PkrI	GCNGC	2 cut(s)	1283, 1369
PleI	GAGTC	1 cut(s)	833
PpsI	GAGTC	1 cut(s)	833
PpuMI	RGGWCCY	2 cut(s)	175, 1913
PshBI	ATTAAT	1 cut(s)	333
PsiI	TTATAA	1 cut(s)	1794
Psp5II	RGGWCCY	2 cut(s)	175, 1913
Psp6I	CCWGG	5 cut(s)	117, 202, 1102, 1118, 1550
PspGI	CCWGG	5 cut(s)	117, 202, 1102, 1118, 1550
PspN4I	GGNNCC	6 cut(s)	176, 208, 766, 1098, 1117, 1873
PspPI	GGNCC	5 cut(s)	175, 764, 860, 1328, 1913
PspPPI	RGGWCCY	2 cut(s)	175, 1913
PstI	CTGCAG	2 cut(s)	1279, 1369
PstNI	CAGNNNCTG	1 cut(s)	1166
PsuI	RGATCY	3 cut(s)	646, 666, 1115
PvuII	CAGCTG	1 cut(s)	1370
RruI	TCGCGA	1 cut(s)	1181
RsaI	GTAC	3 cut(s)	170, 1617, 1806
RsaNI	GTAC	3 cut(s)	169, 1616, 1805
SalI	GTCGAC	1 cut(s)	125
SapI	GCTCTTC	1 cut(s)	261
SaqAI	TTAA	7 cut(s)	333, 423, 471, 600, 944, 1266, 1878
SatI	GCNGC	2 cut(s)	1282, 1368
Sau3AI	GATC	6 cut(s)	228, 646, 666, 722, 1115, 1644
Sau96I	GGNCC	5 cut(s)	175, 764, 860, 1328, 1913
SchI	GAGTC	1 cut(s)	833
ScrFI	CCNGG	5 cut(s)	119, 204, 1104, 1120, 1552
SduI	GDGCHC	2 cut(s)	796, 1746
SfaNI	GCATC	2 cut(s)	409, 1026
SfcI	CTRYAG	3 cut(s)	1275, 1365, 1783
SinI	GGWCC	4 cut(s)	175, 764, 860, 1913
SmlI	CTYRAG	1 cut(s)	289
SmoI	CTYRAG	1 cut(s)	289
SpeI	ACTAGT	1 cut(s)	1033
Sse9I	AATT	7 cut(s)	279, 880, 1046, 1124, 1145, 1259, 1673
SsiI	CCGC	7 cut(s)	226, 407, 803, 1011, 1023, 1316, 1903
SspMI	CTAG	7 cut(s)	137, 404, 708, 1034, 1607, 1652, 1939
StyD4I	CCNGG	5 cut(s)	117, 202, 1102, 1118, 1550
TaaI	ACNGT	2 cut(s)	320, 1336
TaiI	ACGT	2 cut(s)	1296, 1548
TaqI	TCGA	4 cut(s)	5, 126, 163, 1908
TasI	AATT	7 cut(s)	279, 880, 1046, 1124, 1145, 1259, 1673
TatI	WGTACW	1 cut(s)	1615
TfiI	GAWTC	8 cut(s)	14, 108, 302, 375, 1130, 1163, 1779, 1925
Tru1I	TTAA	7 cut(s)	333, 423, 471, 600, 944, 1266, 1878
Tru9I	TTAA	7 cut(s)	333, 423, 471, 600, 944, 1266, 1878
TscAI	CASTG	4 cut(s)	1002, 1341, 1519, 1873
TseFI	GTSAC	2 cut(s)	73, 1225
TseI	GCWGC	2 cut(s)	1281, 1367
Tsp45I	GTSAC	2 cut(s)	73, 1225
TspDTI	ATGAA	8 cut(s)	207, 279, 340, 569, 836, 1326, 1703, 1917
TspRI	CASTG	4 cut(s)	1002, 1341, 1519, 1873
Van91I	CCANNNNNTGG	1 cut(s)	1076
VpaK11BI	GGWCC	4 cut(s)	175, 764, 860, 1913
VspI	ATTAAT	1 cut(s)	333
XagI	CCTNNNNNAGG	1 cut(s)	289
XapI	RAATTY	2 cut(s)	279, 1046
XmiI	GTMKAC	2 cut(s)	126, 447
XmnI	GAANNNNTTC	2 cut(s)	567, 990
XspI	CTAG	7 cut(s)	137, 404, 708, 1034, 1607, 1652, 1939

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.