Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr08

Orthogroup ID

OG0002285

Physical Location & Seq

Genomic Coordinates Reverse (-)

26466215 .. 26472901

Gene Structure 6687 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD08G1204400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1938 bp

ATGTCATCTCAGAGCGTTCGACTGATTATTCAGGACCGTTATGTGGTCATGGATAATGGCATACTCCAAGTTACGTTATCAAAACCAGATGGAATTGTTACCAAAATACAATACAATGGCATCGACAATTTGCTCGAAGTTCTTGATGAAGAAGTAAATAGAGGGTATTGGGACCTTGTTTGGAGTGAAGCAGGAAGTGTGGGCACAACCGGGACATTTGATGTGATTAAAGGGACAAAATTCAAGGTTAGAGTGGAAAACGAGGAACAAGTAGAGATCTCCTTCACAAGAAAGTGGAATCCGTCTCAAAAGGGAGAAGTTGTCCCTCTCAATATAGATAAAAGATTTATAATGCTTCGTAATTCTTCAGGCTTCTACTCATATGCCATCTATGAGCACTTGAAAGAATGGCCTCCTTTCAACCTTCCACAGACTAGGATTGTCTTCAAGCTCAGAAAAGAAAAGTTTCACTATATGGCCATAGCAGATAACAGGCAAAGATACATGCCCCTCCCTGACGATCGATCATCTGAGAGAAGTCAAGCCCTAGCTTACCCTGAAGCAGTCCTTCTTGTCGATCCTATAGAGCCAGAATTCAAGGGAGAGGTGGATGATAAGTACGAATACTCATGTGAGAACCAAAACCTGCATGTTCATGGTTGGGTATGTATGGACCCACCCGTCGGCTTTTGGCAAATAACGCCCAGTGATGAATTTCGATCCGGTGGACCTCTCAAACAGAATCTCACCTCCCATGTTGGCCCCTATTGCCTTGCGATGTTTCTTAGCGCTCATTATTCAGGAGAGGACCTAGTACTGAAGCTGAAACCAGATGAGCCGTGGAAGAAAGTTTTTGGCCCTATATTCATTTATCTTAATTCTGCGTCCGATGTAACTGATCCATCACCACTTTGGGATGATGCAAAAAAACAGATGATGACAGAAGTGGAAAGCTGGCCTTACAAGTTTCCTGCTTCCAAGGATTATCCGCCGCCGGATCAACGGGGTAATGTTAAGGGTAGAATACAAATTCTGGATAGGTATGTTAGTAAAGATCGCATACCTGGAAACGGTGCGTATGTAGGCTTGGCACCACCAGGAGACGCTGGATCATGGCAAAGAGATTGTAAGGGCTACCAGTTTTGGACTAGGGCAGATGAGAAAGGATATTACTCTATAGAGAATATACGCGAGGGTGACTATAATCTCTATGCATGGTGTCCTGGTTTTATCGGAGATTATCGATATGACGCAACTATTAGCATAACCGCAGGTTGTGATATTGATGTGGATGATATTGTATATGAGCCTCCAAGAGATGGACCAACGTTGTGGGAAATTGGCATCCCTGATCGTTCTGCTGCTGAATTCTATGTTCCTGATCCTAATCCAATGTATATCAATAAACTTTATGTCAACCATCCTGATAGGTTTAGGCAGTACGGATTATGGGAAAGATATCAAGAGTTATATCCTGATGAAGATTTAATTTACAGCATCGGCACCAGTGACTACACTAAAGATTGGTTCTTCGCCCAGGTTCCTAGGAAGAAAGATGATGAAACATATCAAGGCACTACATGGCAAATCAAGTTTCAACTTAAGCATTTCAGTGAAAGTGTTACCCTCAAACTTCGAATAGCCCTTGCCACTGCAAACATTGCAGAATTACAGATTCGAATAAATGATTCGAAAGCAGACCCTCCGCTGTTTACGACTGGAGTTATTGGAAAGGACAATTCAATTGCTAGGCATGGAATCCATGGTCTGTACTGGCTGTATAACATAAATATACCAGGCACATTGCTGGTGGAAGGAGCCAATACCCTATTTCTAACGCAAACAATGAGCACCAGGCCTTTGGCTCCTTTCCATGGACTCATGTATGACTATATTCGTTTAGAAGGTCCATCATCTTCTTCTTCCAGTACCACCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CBM-like Rhamnogal_lyase fn3_3

Protein Analysis

646

Amino Acids

74.06

Weight (kDa)

5.18

Isoelectric Point (pI)

36.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rhamnogal_lyase	PF06045	4 - 203	2e-98	Rhamnogalacturonate lyase family
fn3_3	PF14686	357 - 429	7e-27	Polysaccharide lyase family 4, domain II
CBM-like	PF14683	443 - 634	1e-50	Polysaccharide lyase family 4, domain III

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002285)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24430 AT4G24430
fragaria_vesca	FvH4_5g34131 FvH4_5g34131 FvH4_5g34131 FvH4_5g34131 FvH4_5g34150
malus_domestica	MD08G1204400.v1.1 MD08G1205000.v1.1
prunus_persica	Prupe.1G536600_v2.0.a1 Prupe.1G536600_v2.0.a1 Prupe.1G536600_v2.0.a1 Prupe.1G536700_v2.0.a1 Prupe.1G536700_v2.0.a1
pyrus_communis	pycom08g17670 pycom08g17720
rosa_chinensis	RchiOBHm_Chr7g0233711 RchiOBHm_Chr7g0233721 RchiOBHm_Chr7g0233731 RchiOBHm_Chr7g0233741
rosa_laevigata	RLG00000001237 RLG00000001239 RLG00000001240
rosa_multiflora	Rmu_sc0000740.1_g000047 Rmu_sc0000740.1_g000058 Rmu_sc0010145.1_g000001 Rmu_sc0011583.1_g000004
rosa_roxburghii	Rroxscaffold_3G00227030 Rroxscaffold_3G00227050 Rroxscaffold_3G00227070
rosa_rugosa	Rorug07G0282300 Rorug07G0282300
rosa_samantha	Rh7AG438600 Rh7AG438700 Rh7BG411300 Rh7CG458200 Rh7CG458300 Rh7CG458400 Rh7DG428200
rosa_wichuraiana	Rw7G036170 Rw7G036180 Rw7G036230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	350
AasI	GACNNNNNNGTC	1 cut(s)	680
Acc36I	ACCTGC	2 cut(s)	654, 1262
AccB1I	GGYRCC	2 cut(s)	1090, 1502
AccB7I	CCANNNNNTGG	1 cut(s)	1319
AccII	CGCG	1 cut(s)	1191
AciI	CCGC	4 cut(s)	989, 992, 1269, 1706
AclI	AACGTT	1 cut(s)	1328
AclWI	GGATC	6 cut(s)	572, 714, 893, 1005, 1117, 1376
AcoI	YGGCCR	1 cut(s)	477
AcsI	RAATTY	5 cut(s)	239, 593, 713, 1029, 1367
AcuI	CTGAAG	3 cut(s)	351, 579, 839
AfaI	GTAC	5 cut(s)	620, 816, 1442, 1772, 1930
AfeI	AGCGCT	1 cut(s)	790
AfiI	CCNNNNNNNGG	5 cut(s)	43, 683, 1070, 1319, 1874
AflII	CTTAAG	1 cut(s)	1601
AgsI	TTSAA	7 cut(s)	244, 403, 421, 448, 598, 1598, 1743
AjnI	CCWGG	6 cut(s)	1063, 1096, 1222, 1536, 1795, 1853
AluBI	AGCT	4 cut(s)	451, 551, 823, 954
AluI	AGCT	4 cut(s)	451, 551, 823, 954
Alw21I	GWGCWC	2 cut(s)	399, 1853
Alw26I	GTCTC	2 cut(s)	309, 1095
AlwI	GGATC	6 cut(s)	572, 714, 893, 1005, 1117, 1376
Aor51HI	AGCGCT	1 cut(s)	790
AoxI	GGCC	6 cut(s)	410, 477, 760, 856, 956, 1856
ApeKI	GCWGC	1 cut(s)	1361
ApoI	RAATTY	5 cut(s)	239, 593, 713, 1029, 1367
Asp700I	GAANNNNTTC	1 cut(s)	465
AspA2I	CCTAGG	1 cut(s)	1544
AspLEI	GCGC	1 cut(s)	791
AspS9I	GGNCC	9 cut(s)	34, 172, 673, 728, 761, 808, 857, 1322, 1907
AsuC2I	CCSGG	1 cut(s)	211
AsuHPI	GGTGA	3 cut(s)	739, 897, 1208
AsuII	TTCGAA	3 cut(s)	1636, 1678, 1691
AvaII	GGWCC	7 cut(s)	34, 172, 673, 728, 808, 1322, 1907
AvrII	CCTAGG	1 cut(s)	1544
BaeGI	GKGCMC	1 cut(s)	206
BalI	TGGCCA	1 cut(s)	479
BanI	GGYRCC	2 cut(s)	1090, 1502
BbsI	GAAGAC	1 cut(s)	436
Bbv12I	GWGCWC	2 cut(s)	399, 1853
BbvI	GCAGC	1 cut(s)	1348
BccI	CCATC	6 cut(s)	83, 395, 910, 1313, 1428, 1918
BceAI	ACGGC	1 cut(s)	823
BciT130I	CCWGG	6 cut(s)	1065, 1098, 1224, 1538, 1797, 1855
BcnI	CCSGG	1 cut(s)	211
BcoDI	GTCTC	2 cut(s)	309, 1095
BfaI	CTAG	6 cut(s)	435, 548, 812, 1149, 1545, 1749
BfmI	CTRYAG	2 cut(s)	582, 1176
BfoI	RGCGCY	1 cut(s)	792
BfrI	CTTAAG	1 cut(s)	1601
BfuAI	ACCTGC	2 cut(s)	654, 1262
BglII	AGATCT	1 cut(s)	276
BisI	GCNGC	2 cut(s)	992, 1362
BlnI	CCTAGG	1 cut(s)	1544
BlsI	GCNGC	2 cut(s)	993, 1363
BmcAI	AGTACT	1 cut(s)	816
Bme1390I	CCNGG	7 cut(s)	211, 1065, 1098, 1224, 1538, 1797, 1855
Bme18I	GGWCC	7 cut(s)	34, 172, 673, 728, 808, 1322, 1907
BmgT120I	GGNCC	9 cut(s)	34, 172, 673, 728, 761, 808, 857, 1322, 1907
BmiI	GGNNCC	8 cut(s)	173, 675, 763, 1092, 1504, 1542, 1819, 1866
BmrFI	CCNGG	7 cut(s)	211, 1065, 1098, 1224, 1538, 1797, 1855
BmrI	ACTGGG	1 cut(s)	699
BmsI	GCATC	4 cut(s)	129, 910, 1353, 1506
BmuI	ACTGGG	1 cut(s)	699
BpiI	GAAGAC	1 cut(s)	436
BpmI	CTGGAG	1 cut(s)	1740
Bpu14I	TTCGAA	3 cut(s)	1636, 1678, 1691
BpuMI	CCSGG	1 cut(s)	211
Bsa29I	ATCGAT	2 cut(s)	523, 1243
BsaBI	GATNNNNATC	1 cut(s)	1386
BsaJI	CCNNGG	6 cut(s)	839, 978, 1536, 1544, 1762, 1873
BsaWI	WCCGGW	1 cut(s)	722
BsaXI	ACNNNNNCTCC	2 cut(s)	306, 336
Bsc4I	CCNNNNNNNGG	5 cut(s)	43, 683, 1070, 1319, 1874
Bse1I	ACTGG	6 cut(s)	705, 1138, 1506, 1723, 1778, 1926
Bse3DI	GCAATG	2 cut(s)	1659, 1802
Bse8I	GATNNNNATC	1 cut(s)	1386
BseBI	CCWGG	6 cut(s)	1065, 1098, 1224, 1538, 1797, 1855
BseCI	ATCGAT	2 cut(s)	523, 1243
BseDI	CCNNGG	6 cut(s)	839, 978, 1536, 1544, 1762, 1873
BseGI	GGATG	5 cut(s)	616, 922, 1297, 1344, 1420
BseJI	GATNNNNATC	1 cut(s)	1386
BseLI	CCNNNNNNNGG	5 cut(s)	43, 683, 1070, 1319, 1874
BseMI	GCAATG	2 cut(s)	1659, 1802
BseMII	CTCAG	3 cut(s)	23, 466, 522
BseNI	ACTGG	6 cut(s)	705, 1138, 1506, 1723, 1778, 1926
BseSI	GKGCMC	1 cut(s)	206
BseXI	GCAGC	1 cut(s)	1348
Bsh1236I	CGCG	1 cut(s)	1191
Bsh1285I	CGRYCG	1 cut(s)	523
BshFI	GGCC	6 cut(s)	412, 479, 762, 858, 958, 1858
BshNI	GGYRCC	2 cut(s)	1090, 1502
BshVI	ATCGAT	2 cut(s)	523, 1243
BsiEI	CGRYCG	1 cut(s)	523
BsiHKAI	GWGCWC	2 cut(s)	399, 1853
BsiSI	CCGG	3 cut(s)	210, 723, 995
BslFI	GGGAC	4 cut(s)	185, 226, 247, 308
BslI	CCNNNNNNNGG	5 cut(s)	43, 683, 1070, 1319, 1874
BsmAI	GTCTC	2 cut(s)	309, 1095
BsmBI	CGTCTC	2 cut(s)	309, 1095
BsmFI	GGGAC	4 cut(s)	185, 226, 247, 308
BsnI	GGCC	6 cut(s)	412, 479, 762, 858, 958, 1858
Bsp119I	TTCGAA	3 cut(s)	1636, 1678, 1691
Bsp1286I	GDGCHC	3 cut(s)	206, 399, 1853
Bsp19I	CCATGG	2 cut(s)	1762, 1873
BspACI	CCGC	4 cut(s)	989, 992, 1269, 1706
BspANI	GGCC	6 cut(s)	412, 479, 762, 858, 958, 1858
BspCNI	CTCAG	3 cut(s)	22, 465, 523
BspDI	ATCGAT	2 cut(s)	523, 1243
BspFNI	CGCG	1 cut(s)	1191
BspLI	GGNNCC	8 cut(s)	173, 675, 763, 1092, 1504, 1542, 1819, 1866
BspMI	ACCTGC	2 cut(s)	654, 1262
BspPI	GGATC	6 cut(s)	572, 714, 893, 1005, 1117, 1376
BspT104I	TTCGAA	3 cut(s)	1636, 1678, 1691
BspT107I	GGYRCC	2 cut(s)	1090, 1502
BspTI	CTTAAG	1 cut(s)	1601
BsrDI	GCAATG	2 cut(s)	1659, 1802
BsrI	ACTGG	6 cut(s)	705, 1138, 1506, 1723, 1778, 1926
BssECI	CCNNGG	6 cut(s)	839, 978, 1536, 1544, 1762, 1873
BssT1I	CCWWGG	4 cut(s)	978, 1544, 1762, 1873
Bst2UI	CCWGG	6 cut(s)	1065, 1098, 1224, 1538, 1797, 1855
Bst4CI	ACNGT	2 cut(s)	38, 1073
BstAFI	CTTAAG	1 cut(s)	1601
BstAPI	GCANNNNNTGC	1 cut(s)	1661
BstBI	TTCGAA	3 cut(s)	1636, 1678, 1691
BstC8I	GCNNGC	1 cut(s)	956
BstDEI	CTNAG	4 cut(s)	9, 452, 531, 785
BstDSI	CCRYGG	3 cut(s)	839, 1762, 1873
BstF5I	GGATG	5 cut(s)	616, 922, 1297, 1344, 1420
BstFNI	CGCG	1 cut(s)	1191
BstH2I	RGCGCY	1 cut(s)	792
BstHHI	GCGC	1 cut(s)	791
BstMAI	GTCTC	2 cut(s)	309, 1095
BstMCI	CGRYCG	1 cut(s)	523
BstMWI	GCNNNNNNNGC	3 cut(s)	700, 768, 1661
BstNI	CCWGG	6 cut(s)	1065, 1098, 1224, 1538, 1797, 1855
BstNSI	RCATGY	2 cut(s)	508, 653
BstSCI	CCNGG	7 cut(s)	209, 1063, 1096, 1222, 1536, 1795, 1853
BstSFI	CTRYAG	2 cut(s)	582, 1176
BstSLI	GKGCMC	1 cut(s)	206
BstUI	CGCG	1 cut(s)	1191
BstV1I	GCAGC	1 cut(s)	1348
BstV2I	GAAGAC	1 cut(s)	436
BstX2I	RGATCY	1 cut(s)	276
BstXI	CCANNNNNNTGG	2 cut(s)	1332, 1861
BstYI	RGATCY	1 cut(s)	276
Bsu15I	ATCGAT	2 cut(s)	523, 1243
BsuRI	GGCC	6 cut(s)	412, 479, 762, 858, 958, 1858
BsuTUI	ATCGAT	2 cut(s)	523, 1243
BtgI	CCRYGG	3 cut(s)	839, 1762, 1873
BtgZI	GCGATG	1 cut(s)	791
BtsCI	GGATG	5 cut(s)	616, 922, 1297, 1344, 1420
BtsI	GCAGTG	1 cut(s)	1650
BtsIMutI	CAGTG	4 cut(s)	712, 1513, 1618, 1650
BveI	ACCTGC	2 cut(s)	654, 1262
Cac8I	GCNNGC	1 cut(s)	956
CfoI	GCGC	1 cut(s)	791
Cfr13I	GGNCC	9 cut(s)	34, 172, 673, 728, 761, 808, 857, 1322, 1907
ClaI	ATCGAT	2 cut(s)	523, 1243
CseI	GACGC	3 cut(s)	873, 1112, 1259
Csp6I	GTAC	5 cut(s)	619, 815, 1441, 1771, 1929
CviQI	GTAC	5 cut(s)	619, 815, 1441, 1771, 1929
DdeI	CTNAG	4 cut(s)	9, 452, 531, 785
DrdI	GACNNNNNNGTC	1 cut(s)	680
DseDI	GACNNNNNNGTC	1 cut(s)	680
EaeI	YGGCCR	1 cut(s)	477
EciI	GGCGGA	1 cut(s)	978
Eco130I	CCWWGG	4 cut(s)	978, 1544, 1762, 1873
Eco147I	AGGCCT	1 cut(s)	1858
Eco32I	GATATC	1 cut(s)	1460
Eco47I	GGWCC	7 cut(s)	34, 172, 673, 728, 808, 1322, 1907
Eco47III	AGCGCT	1 cut(s)	790
Eco57I	CTGAAG	3 cut(s)	351, 579, 839
EcoO109I	RGGNCCY	2 cut(s)	172, 808
EcoRI	GAATTC	2 cut(s)	593, 1367
EcoRII	CCWGG	6 cut(s)	1063, 1096, 1222, 1536, 1795, 1853
EcoRV	GATATC	1 cut(s)	1460
EcoT14I	CCWWGG	4 cut(s)	978, 1544, 1762, 1873
EcoT22I	ATGCAT	1 cut(s)	1216
ErhI	CCWWGG	4 cut(s)	978, 1544, 1762, 1873
Esp3I	CGTCTC	2 cut(s)	309, 1095
FalI	AAGNNNNNCTT	4 cut(s)	552, 584, 943, 975
FaqI	GGGAC	4 cut(s)	185, 226, 247, 308
FauNDI	CATATG	1 cut(s)	382
Fnu4HI	GCNGC	2 cut(s)	992, 1362
FokI	GGATG	5 cut(s)	623, 929, 1304, 1331, 1407
Fsp4HI	GCNGC	2 cut(s)	992, 1362
FspBI	CTAG	6 cut(s)	435, 548, 812, 1149, 1545, 1749
GlaI	GCGC	1 cut(s)	790
GluI	GCNGC	2 cut(s)	992, 1362
GsuI	CTGGAG	1 cut(s)	1740
HaeII	RGCGCY	1 cut(s)	792
HaeIII	GGCC	6 cut(s)	412, 479, 762, 858, 958, 1858
HapII	CCGG	3 cut(s)	210, 723, 995
HgaI	GACGC	3 cut(s)	873, 1112, 1259
HhaI	GCGC	1 cut(s)	791
Hin6I	GCGC	1 cut(s)	789
HinP1I	GCGC	1 cut(s)	789
HincII	GTYRAC	1 cut(s)	1417
HindII	GTYRAC	1 cut(s)	1417
HinfI	GANTC	6 cut(s)	298, 742, 1675, 1688, 1758, 1878
HpaII	CCGG	3 cut(s)	210, 723, 995
HphI	GGTGA	3 cut(s)	739, 897, 1208
Hpy166II	GTNNAC	3 cut(s)	728, 1417, 1713
Hpy188I	TCNGA	5 cut(s)	12, 455, 532, 889, 1235
Hpy188III	TCNNGA	8 cut(s)	32, 143, 801, 1034, 1379, 1424, 1463, 1475
Hpy8I	GTNNAC	3 cut(s)	728, 1417, 1713
Hpy99I	CGWCG	1 cut(s)	686
HpyAV	CCTTC	5 cut(s)	292, 434, 578, 1808, 1898
HpyCH4III	ACNGT	2 cut(s)	38, 1073
HpyCH4IV	ACGT	2 cut(s)	74, 1328
HpyCH4V	TGCA	5 cut(s)	649, 923, 1214, 1655, 1664
HpyF10VI	GCNNNNNNNGC	3 cut(s)	700, 768, 1661
HpyF3I	CTNAG	4 cut(s)	9, 452, 531, 785
HpySE526I	ACGT	2 cut(s)	74, 1328
HspAI	GCGC	1 cut(s)	789
LmnI	GCTCC	2 cut(s)	1817, 1870
Lsp1109I	GCAGC	1 cut(s)	1348
LweI	GCATC	4 cut(s)	129, 910, 1353, 1506
MaeI	CTAG	6 cut(s)	435, 548, 812, 1149, 1545, 1749
MaeII	ACGT	2 cut(s)	74, 1328
MaeIII	GTNAC	6 cut(s)	70, 97, 892, 1196, 1508, 1621
MfeI	CAATTG	1 cut(s)	1743
MflI	RGATCY	1 cut(s)	276
MhlI	GDGCHC	3 cut(s)	206, 399, 1853
MlsI	TGGCCA	1 cut(s)	479
MluNI	TGGCCA	1 cut(s)	479
MlyI	GAGTC	1 cut(s)	1872
Mox20I	TGGCCA	1 cut(s)	479
Mph1103I	ATGCAT	1 cut(s)	1216
MroXI	GAANNNNTTC	1 cut(s)	465
MscI	TGGCCA	1 cut(s)	479
MseI	TTAA	5 cut(s)	228, 876, 1014, 1487, 1602
MslI	CAYNNNNRTG	2 cut(s)	654, 1611
Msp20I	TGGCCA	1 cut(s)	479
MspA1I	CMGCKG	1 cut(s)	1708
MspCI	CTTAAG	1 cut(s)	1601
MspI	CCGG	3 cut(s)	210, 723, 995
MspR9I	CCNGG	7 cut(s)	211, 1065, 1098, 1224, 1538, 1797, 1855
MunI	CAATTG	1 cut(s)	1743
MvaI	CCWGG	6 cut(s)	1065, 1098, 1224, 1538, 1797, 1855
MvnI	CGCG	1 cut(s)	1191
MwoI	GCNNNNNNNGC	3 cut(s)	700, 768, 1661
NciI	CCSGG	1 cut(s)	211
NcoI	CCATGG	2 cut(s)	1762, 1873
NdeI	CATATG	1 cut(s)	382
NlaIV	GGNNCC	8 cut(s)	173, 675, 763, 1092, 1504, 1542, 1819, 1866
NmuCI	GTSAC	2 cut(s)	1196, 1508
NsiI	ATGCAT	1 cut(s)	1216
NspI	RCATGY	2 cut(s)	508, 653
NspV	TTCGAA	3 cut(s)	1636, 1678, 1691
PceI	AGGCCT	1 cut(s)	1858
PdmI	GAANNNNTTC	1 cut(s)	465
PfeI	GAWTC	5 cut(s)	298, 742, 1675, 1688, 1758
PflMI	CCANNNNNTGG	1 cut(s)	1319
PkrI	GCNGC	2 cut(s)	993, 1363
Ple19I	CGATCG	1 cut(s)	523
PleI	GAGTC	1 cut(s)	1872
PpsI	GAGTC	1 cut(s)	1872
PpuMI	RGGWCCY	2 cut(s)	172, 808
PsiI	TTATAA	1 cut(s)	350
Psp1406I	AACGTT	1 cut(s)	1328
Psp5II	RGGWCCY	2 cut(s)	172, 808
Psp6I	CCWGG	6 cut(s)	1063, 1096, 1222, 1536, 1795, 1853
PspGI	CCWGG	6 cut(s)	1063, 1096, 1222, 1536, 1795, 1853
PspN4I	GGNNCC	8 cut(s)	173, 675, 763, 1092, 1504, 1542, 1819, 1866
PspPI	GGNCC	9 cut(s)	34, 172, 673, 728, 761, 808, 857, 1322, 1907
PspPPI	RGGWCCY	2 cut(s)	172, 808
PsuI	RGATCY	1 cut(s)	276
PvuI	CGATCG	1 cut(s)	523
RsaI	GTAC	5 cut(s)	620, 816, 1442, 1772, 1930
RsaNI	GTAC	5 cut(s)	619, 815, 1441, 1771, 1929
RseI	CAYNNNNRTG	2 cut(s)	654, 1611
SaqAI	TTAA	5 cut(s)	228, 876, 1014, 1487, 1602
SatI	GCNGC	2 cut(s)	992, 1362
Sau96I	GGNCC	9 cut(s)	34, 172, 673, 728, 761, 808, 857, 1322, 1907
ScaI	AGTACT	1 cut(s)	816
SchI	GAGTC	1 cut(s)	1872
ScrFI	CCNGG	7 cut(s)	211, 1065, 1098, 1224, 1538, 1797, 1855
SduI	GDGCHC	3 cut(s)	206, 399, 1853
SfaNI	GCATC	4 cut(s)	129, 910, 1353, 1506
SfcI	CTRYAG	2 cut(s)	582, 1176
SfuI	TTCGAA	3 cut(s)	1636, 1678, 1691
SinI	GGWCC	7 cut(s)	34, 172, 673, 728, 808, 1322, 1907
SmiMI	CAYNNNNRTG	2 cut(s)	654, 1611
SmlI	CTYRAG	1 cut(s)	1601
SmoI	CTYRAG	1 cut(s)	1601
SseBI	AGGCCT	1 cut(s)	1858
SsiI	CCGC	4 cut(s)	989, 992, 1269, 1706
SspMI	CTAG	6 cut(s)	435, 548, 812, 1149, 1545, 1749
StuI	AGGCCT	1 cut(s)	1858
StyD4I	CCNGG	7 cut(s)	209, 1063, 1096, 1222, 1536, 1795, 1853
StyI	CCWWGG	4 cut(s)	978, 1544, 1762, 1873
TaaI	ACNGT	2 cut(s)	38, 1073
TaiI	ACGT	2 cut(s)	77, 1331
TatI	WGTACW	2 cut(s)	814, 1770
TauI	GCSGC	1 cut(s)	994
TfiI	GAWTC	5 cut(s)	298, 742, 1675, 1688, 1758
Tru1I	TTAA	5 cut(s)	228, 876, 1014, 1487, 1602
Tru9I	TTAA	5 cut(s)	228, 876, 1014, 1487, 1602
TscAI	CASTG	4 cut(s)	712, 1513, 1618, 1657
TseFI	GTSAC	2 cut(s)	1196, 1508
TseI	GCWGC	1 cut(s)	1361
Tsp45I	GTSAC	2 cut(s)	1196, 1508
TspDTI	ATGAA	6 cut(s)	162, 644, 726, 856, 1494, 1575
TspGWI	ACGGA	2 cut(s)	291, 1458
TspRI	CASTG	4 cut(s)	712, 1513, 1618, 1657
Van91I	CCANNNNNTGG	1 cut(s)	1319
Vha464I	CTTAAG	1 cut(s)	1601
VpaK11BI	GGWCC	7 cut(s)	34, 172, 673, 728, 808, 1322, 1907
XapI	RAATTY	5 cut(s)	239, 593, 713, 1029, 1367
XceI	RCATGY	2 cut(s)	508, 653
XcmI	CCANNNNNNNNNTGG	2 cut(s)	837, 909
XmaJI	CCTAGG	1 cut(s)	1544
XmnI	GAANNNNTTC	1 cut(s)	465
XspI	CTAG	6 cut(s)	435, 548, 812, 1149, 1545, 1749
ZrmI	AGTACT	1 cut(s)	816
Zsp2I	ATGCAT	1 cut(s)	1216

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.