Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0002285

Physical Location & Seq

Genomic Coordinates Forward (+)

58208194 .. 58214627

Gene Structure 6434 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ20948

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1923 bp

ATGTCGTCCCTGGGGGTGCAATTGCATATTCAGGACCATCATGTGATTATGGATAACGGCATACTCCAAGTTACATTATCAAATCCAGATGGAATTGTTACCGGGATCCAATATAACGGCATTGACAATTTACTTGAAGTTCTTGATGAAGAAGCTAATAGAGGGTATTGGGACCTCGTTTGGAGTGAAACGGGAAGTACCGGAACAACTGGAACCTTTGATCCAATTATAGGAACAAAACTCACCGTTATAGTGGAAAGTGAAGAACAAGTAGAGATCTCATTCACCAGAGAGTGGAATCACGAGGACAAGAATGTCCCGCTAAATATAGACAAAAGGTTTGTAATGCTTCGTAATTCGTCAGGCTTCTACTCGTACGCCATCTACGAGCACTTGAAAGAATGGCCTCCTTTCAACCTTCCCCAGACCAGGATTGTGTTCAAGCTCAGTAAAGAGAAGTTTCAGTATATGGCGATAGCTGATAACAGGCAAAGAAACATGCCCCTTCCTGATGACCGATCACCAGAGAGAAGCCAAATCCTAAACTCAGAATTCCCAGAAGCACTCCTTCTTGTCAATCCTATAGAGCCACAATATAAGGGAGAGGTGGATGACAAGTACCAATACTCATGCGAGAACCAAAATTTGTGGGTTCACGGTTGGATATGCATGGACCCTCATGTAGGGTTTTGGCAGATAACGCCCAGTGATGAGTTCCGATCTGGCGGGCCTCTTAAACAAAACCTCACCTCCCACGTCGGTCCTTATTGTCTTGCAAAGTTTCTGAGTGCTCACTATTCAGGAGAGGACCTTGTGCTGAAGCTTAAACCAAATGAGCCATGGAAAAAAGTTTTCGGCCCTGTTTTTATCTATCTTAATTCCGCATCTCATGCAATAGATTCATCACCACTTTGGGAAGATGCAAAGAAACAGATGATGACAGAAGTACAGAGCTGGCCTTATGACTTTCCAGCTTCCAATGATTTTCCAACGTCAAAGCAACGGGGTAATGTTAGTGGTAGAATACGTGTTCGAGATAGCTTTGTTAGCGACGATCACATACTCGGCCATGGTGCTTATGTTGGGTTGGCACCCCCTGGAGATGTTGGATCATGGCAAAGAGATTGCAAGGGTTACCAGTTCTGGACTAGGGCAGACGAGAATGGCTACTACTCTATCAAAAATATACGTGAGGGGGACTACAATCTCTACGCGTGGATTCCTGGGTTTATTGGAGATTACCGCTATGGTTTAACCATTAACATCACTCCAGGTTGTAATATTGACCTTGGTGATCTTGTATATGAGCCTCCAAGGGATGGACCAACATTGTGGGAAATTGGTTACCCGGATCGCTCTGCTGCTGGATTCTATGTTCCCGATCCTAATCCAAAGTATATCAATAAACTTTATGTAAACCATCCTGACAGGTTTAGGCAGTGGGGGTTATGGGAAAGATATGCCGAGTTATATCCTAATGAGGATTTAGTTTACACTATTGGAACTAGTGACTATGCTAAAGATTGGTTCTTTACTCAAGTTACCAGGAAGAAAGATGATGGCACATATCAAGGGACTACATGGAAAATCAAGTTTCAGCTTGACAATGTCAGTCAGACCAAAATCTACAAACTTCGATTGGCCCTCGCTACTGCAAATATTGCAGAATTACAGATTCGCATAAATGATTCCAAAGCAGACCCTCCTCTGTTTACGACCGGTGTGATTGGACACGACAACACAATTTGCAGACATGGAATTCATGGTCTCTACAGGCTGTATAGCATAGATGTATCCAGCACATTGCTTGTGAAAGGTGACAATACAGTGTATCTAACTCAAGCAATGAGCACCAGCCCTTTCGTGGGAATCATGTATGACTATATTCGTTTAGAAGCTCCATCATCTTCAACTTCCGCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0003674 GO:0003824 GO:0005975 GO:0005976 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010393 GO:0016052 GO:0016829 GO:0016835 GO:0016837 GO:0017144 GO:0042737 GO:0043170 GO:0044237 GO:0044238 GO:0044248 GO:0045488 GO:0045490 GO:0071704 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CBM-like Rhamnogal_lyase fn3_3

Protein Analysis

640

Amino Acids

73.17

Weight (kDa)

5.29

Isoelectric Point (pI)

38.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rhamnogal_lyase	PF06045	5 - 203	4.2e-88	Rhamnogalacturonate lyase family
fn3_3	PF14686	357 - 429	7.3e-26	Polysaccharide lyase family 4, domain II
CBM-like	PF14683	443 - 631	2.3e-51	Polysaccharide lyase family 4, domain III

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002285)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24430 AT4G24430
fragaria_vesca	FvH4_5g34131 FvH4_5g34131 FvH4_5g34131 FvH4_5g34131 FvH4_5g34150
malus_domestica	MD08G1204400.v1.1 MD08G1205000.v1.1
prunus_persica	Prupe.1G536600_v2.0.a1 Prupe.1G536600_v2.0.a1 Prupe.1G536600_v2.0.a1 Prupe.1G536700_v2.0.a1 Prupe.1G536700_v2.0.a1
pyrus_communis	pycom08g17670 pycom08g17720
rosa_chinensis	RchiOBHm_Chr7g0233711 RchiOBHm_Chr7g0233721 RchiOBHm_Chr7g0233731 RchiOBHm_Chr7g0233741
rosa_laevigata	RLG00000001237 RLG00000001239 RLG00000001240
rosa_multiflora	Rmu_sc0000740.1_g000047 Rmu_sc0000740.1_g000058 Rmu_sc0010145.1_g000001 Rmu_sc0011583.1_g000004
rosa_roxburghii	Rroxscaffold_3G00227030 Rroxscaffold_3G00227050 Rroxscaffold_3G00227070
rosa_rugosa	Rorug07G0282300 Rorug07G0282300
rosa_samantha	Rh7AG438600 Rh7AG438700 Rh7BG411300 Rh7CG458200 Rh7CG458300 Rh7CG458400 Rh7DG428200
rosa_wichuraiana	Rw7G036170 Rw7G036180 Rw7G036230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	314
AccB1I	GGYRCC	1 cut(s)	1090
AccB7I	CCANNNNNTGG	2 cut(s)	294, 1319
AccII	CGCG	1 cut(s)	1214
AciI	CCGC	5 cut(s)	320, 726, 882, 1243, 1917
AclWI	GGATC	6 cut(s)	100, 113, 215, 1117, 1359, 1376
AcoI	YGGCCR	1 cut(s)	1066
AcsI	RAATTY	3 cut(s)	551, 643, 1758
AcuI	CTGAAG	1 cut(s)	839
AfaI	GTAC	4 cut(s)	199, 377, 620, 948
AfiI	CCNNNNNNNGG	7 cut(s)	230, 294, 429, 683, 1319, 1864, 1865
AflIII	ACRYGT	2 cut(s)	1027, 1212
AgeI	ACCGGT	1 cut(s)	1718
AgsI	TTSAA	5 cut(s)	137, 397, 415, 442, 1911
AhlI	ACTAGT	1 cut(s)	1505
AjiI	CACGTC	1 cut(s)	757
AjnI	CCWGG	6 cut(s)	9, 428, 1096, 1222, 1270, 1544
AloI	GAACNNNNNNTCC	4 cut(s)	205, 237, 1359, 1391
AluBI	AGCT	9 cut(s)	155, 445, 479, 823, 954, 974, 1041, 1600, 1898
AluI	AGCT	9 cut(s)	155, 445, 479, 823, 954, 974, 1041, 1600, 1898
Alw21I	GWGCWC	3 cut(s)	393, 793, 1853
Alw26I	GTCTC	1 cut(s)	1772
AlwI	GGATC	6 cut(s)	100, 113, 215, 1117, 1359, 1376
AoxI	GGCC	6 cut(s)	404, 728, 856, 956, 1066, 1641
ApeKI	GCWGC	1 cut(s)	1361
ApoI	RAATTY	3 cut(s)	551, 643, 1758
ArsI	GACNNNNNNTTYG	2 cut(s)	323, 355
AsiGI	ACCGGT	1 cut(s)	1718
AspS9I	GGNCC	9 cut(s)	34, 172, 673, 728, 761, 808, 857, 1322, 1642
AsuC2I	CCSGG	2 cut(s)	103, 1349
AsuHPI	GGTGA	7 cut(s)	235, 277, 513, 739, 897, 1304, 1829
AvaII	GGWCC	6 cut(s)	34, 172, 673, 761, 808, 1322
BamHI	GGATCC	1 cut(s)	105
BanI	GGYRCC	1 cut(s)	1090
BauI	CACGAG	1 cut(s)	302
Bbv12I	GWGCWC	3 cut(s)	393, 793, 1853
BbvI	GCAGC	1 cut(s)	1348
BccI	CCATC	7 cut(s)	45, 83, 389, 1313, 1428, 1553, 1909
BceAI	ACGGC	2 cut(s)	73, 133
BciT130I	CCWGG	6 cut(s)	11, 430, 1098, 1224, 1272, 1546
BciVI	GTATCC	1 cut(s)	1804
BcnI	CCSGG	2 cut(s)	103, 1349
BcoDI	GTCTC	1 cut(s)	1772
BcuI	ACTAGT	1 cut(s)	1505
BfaI	CTAG	2 cut(s)	1149, 1506
BfmI	CTRYAG	2 cut(s)	582, 1771
BfuI	GTATCC	1 cut(s)	1804
BglII	AGATCT	1 cut(s)	276
BisI	GCNGC	1 cut(s)	1362
BlsI	GCNGC	1 cut(s)	1363
Bme1390I	CCNGG	8 cut(s)	11, 103, 430, 1098, 1224, 1272, 1349, 1546
Bme18I	GGWCC	6 cut(s)	34, 172, 673, 761, 808, 1322
BmgBI	CACGTC	1 cut(s)	757
BmgT120I	GGNCC	9 cut(s)	34, 172, 673, 728, 761, 808, 857, 1322, 1642
BmiI	GGNNCC	5 cut(s)	107, 173, 214, 675, 1092
BmrFI	CCNGG	8 cut(s)	11, 103, 430, 1098, 1224, 1272, 1349, 1546
BmrI	ACTGGG	1 cut(s)	699
BmsI	GCATC	2 cut(s)	893, 910
BmuI	ACTGGG	1 cut(s)	699
BpmI	CTGGAG	2 cut(s)	1119, 1254
BpuEI	CTTGAG	2 cut(s)	1521, 1824
BpuMI	CCSGG	2 cut(s)	103, 1349
BsaAI	YACGTR	2 cut(s)	1028, 1190
BsaBI	GATNNNNATC	1 cut(s)	1386
BsaI	GGTCTC	1 cut(s)	1772
BsaJI	CCNNGG	8 cut(s)	9, 10, 839, 1069, 1096, 1223, 1288, 1313
BsaWI	WCCGGW	2 cut(s)	200, 1718
BsaXI	ACNNNNNCTCC	2 cut(s)	734, 764
Bsc4I	CCNNNNNNNGG	7 cut(s)	230, 294, 429, 683, 1319, 1864, 1865
Bse118I	RCCGGY	1 cut(s)	1718
Bse1I	ACTGG	3 cut(s)	214, 705, 1138
Bse3DI	GCAATG	2 cut(s)	1802, 1851
Bse8I	GATNNNNATC	1 cut(s)	1386
BseBI	CCWGG	6 cut(s)	11, 430, 1098, 1224, 1272, 1546
BseDI	CCNNGG	8 cut(s)	9, 10, 839, 1069, 1096, 1223, 1288, 1313
BseGI	GGATG	3 cut(s)	616, 1324, 1420
BseJI	GATNNNNATC	1 cut(s)	1386
BseLI	CCNNNNNNNGG	7 cut(s)	230, 294, 429, 683, 1319, 1864, 1865
BseMI	GCAATG	2 cut(s)	1802, 1851
BseMII	CTCAG	3 cut(s)	460, 561, 776
BseNI	ACTGG	3 cut(s)	214, 705, 1138
BseRI	GAGGAG	1 cut(s)	1695
BseXI	GCAGC	1 cut(s)	1348
Bsh1236I	CGCG	1 cut(s)	1214
Bsh1285I	CGRYCG	1 cut(s)	1719
BshFI	GGCC	6 cut(s)	406, 730, 858, 958, 1068, 1643
BshNI	GGYRCC	1 cut(s)	1090
BshTI	ACCGGT	1 cut(s)	1718
BsiEI	CGRYCG	1 cut(s)	1719
BsiHKAI	GWGCWC	3 cut(s)	393, 793, 1853
BsiSI	CCGG	4 cut(s)	102, 201, 1349, 1719
BsiWI	CGTACG	1 cut(s)	375
BslFI	GGGAC	4 cut(s)	185, 302, 1211, 1588
BslI	CCNNNNNNNGG	7 cut(s)	230, 294, 429, 683, 1319, 1864, 1865
BsmAI	GTCTC	1 cut(s)	1772
BsmFI	GGGAC	4 cut(s)	185, 302, 1211, 1588
BsnI	GGCC	6 cut(s)	406, 730, 858, 958, 1068, 1643
Bso31I	GGTCTC	1 cut(s)	1772
Bsp1286I	GDGCHC	3 cut(s)	393, 793, 1853
Bsp19I	CCATGG	2 cut(s)	839, 1069
BspACI	CCGC	5 cut(s)	320, 726, 882, 1243, 1917
BspANI	GGCC	6 cut(s)	406, 730, 858, 958, 1068, 1643
BspCNI	CTCAG	3 cut(s)	459, 560, 777
BspFNI	CGCG	1 cut(s)	1214
BspLI	GGNNCC	5 cut(s)	107, 173, 214, 675, 1092
BspPI	GGATC	6 cut(s)	100, 113, 215, 1117, 1359, 1376
BspT107I	GGYRCC	1 cut(s)	1090
BspTNI	GGTCTC	1 cut(s)	1772
BsrDI	GCAATG	2 cut(s)	1802, 1851
BsrFI	RCCGGY	1 cut(s)	1718
BsrI	ACTGG	3 cut(s)	214, 705, 1138
BssAI	RCCGGY	1 cut(s)	1718
BssECI	CCNNGG	8 cut(s)	9, 10, 839, 1069, 1096, 1223, 1288, 1313
BssSI	CACGAG	1 cut(s)	302
BssT1I	CCWWGG	4 cut(s)	839, 1069, 1288, 1313
Bst2BI	CACGAG	1 cut(s)	302
Bst2UI	CCWGG	6 cut(s)	11, 430, 1098, 1224, 1272, 1546
Bst4CI	ACNGT	3 cut(s)	247, 659, 1828
BstAPI	GCANNNNNTGC	2 cut(s)	890, 1661
BstBAI	YACGTR	2 cut(s)	1028, 1190
BstC8I	GCNNGC	2 cut(s)	728, 956
BstDEI	CTNAG	3 cut(s)	446, 547, 785
BstDSI	CCRYGG	2 cut(s)	839, 1069
BstEII	GGTNACC	2 cut(s)	1133, 1343
BstENI	CCTNNNNNAGG	1 cut(s)	681
BstF5I	GGATG	3 cut(s)	616, 1324, 1420
BstFNI	CGCG	1 cut(s)	1214
BstMAI	GTCTC	1 cut(s)	1772
BstMCI	CGRYCG	1 cut(s)	1719
BstMWI	GCNNNNNNNGC	4 cut(s)	700, 890, 1047, 1661
BstNI	CCWGG	6 cut(s)	11, 430, 1098, 1224, 1272, 1546
BstNSI	RCATGY	1 cut(s)	502
BstPI	GGTNACC	2 cut(s)	1133, 1343
BstSCI	CCNGG	8 cut(s)	9, 101, 428, 1096, 1222, 1270, 1347, 1544
BstSFI	CTRYAG	2 cut(s)	582, 1771
BstUI	CGCG	1 cut(s)	1214
BstV1I	GCAGC	1 cut(s)	1348
BstX2I	RGATCY	2 cut(s)	105, 276
BstXI	CCANNNNNNTGG	1 cut(s)	1332
BstYI	RGATCY	2 cut(s)	105, 276
BsuI	GTATCC	1 cut(s)	1804
BsuRI	GGCC	6 cut(s)	406, 730, 858, 958, 1068, 1643
BtgI	CCRYGG	2 cut(s)	839, 1069
BtrI	CACGTC	1 cut(s)	757
BtsCI	GGATG	3 cut(s)	616, 1324, 1420
BtsI	GCAGTG	1 cut(s)	1445
BtsIMutI	CAGTG	3 cut(s)	712, 1445, 1833
Cac8I	GCNNGC	2 cut(s)	728, 956
Cfr10I	RCCGGY	1 cut(s)	1718
Cfr13I	GGNCC	9 cut(s)	34, 172, 673, 728, 761, 808, 857, 1322, 1642
Csp6I	GTAC	4 cut(s)	198, 376, 619, 947
CspAI	ACCGGT	1 cut(s)	1718
CspCI	CAANNNNNGTGG	2 cut(s)	629, 664
CviQI	GTAC	4 cut(s)	198, 376, 619, 947
DdeI	CTNAG	3 cut(s)	446, 547, 785
DrdI	GACNNNNNNGTC	1 cut(s)	314
DseDI	GACNNNNNNGTC	1 cut(s)	314
EaeI	YGGCCR	1 cut(s)	1066
EciI	GGCGGA	1 cut(s)	1906
Eco130I	CCWWGG	4 cut(s)	839, 1069, 1288, 1313
Eco31I	GGTCTC	1 cut(s)	1772
Eco47I	GGWCC	6 cut(s)	34, 172, 673, 761, 808, 1322
Eco57I	CTGAAG	1 cut(s)	839
Eco91I	GGTNACC	2 cut(s)	1133, 1343
EcoNI	CCTNNNNNAGG	1 cut(s)	681
EcoO109I	RGGNCCY	2 cut(s)	172, 808
EcoO65I	GGTNACC	2 cut(s)	1133, 1343
EcoRI	GAATTC	2 cut(s)	551, 1758
EcoRII	CCWGG	6 cut(s)	9, 428, 1096, 1222, 1270, 1544
EcoT14I	CCWWGG	4 cut(s)	839, 1069, 1288, 1313
EcoT22I	ATGCAT	1 cut(s)	671
ErhI	CCWWGG	4 cut(s)	839, 1069, 1288, 1313
FalI	AAGNNNNNCTT	2 cut(s)	552, 584
FaqI	GGGAC	4 cut(s)	185, 302, 1211, 1588
FauI	CCCGC	2 cut(s)	327, 719
Fnu4HI	GCNGC	1 cut(s)	1362
FokI	GGATG	3 cut(s)	623, 1331, 1407
Fsp4HI	GCNGC	1 cut(s)	1362
FspBI	CTAG	2 cut(s)	1149, 1506
GluI	GCNGC	1 cut(s)	1362
GsuI	CTGGAG	2 cut(s)	1119, 1254
HaeIII	GGCC	6 cut(s)	406, 730, 858, 958, 1068, 1643
HapII	CCGG	4 cut(s)	102, 201, 1349, 1719
HindIII	AAGCTT	1 cut(s)	821
HinfI	GANTC	7 cut(s)	298, 899, 1219, 1368, 1675, 1688, 1869
HpaII	CCGG	4 cut(s)	102, 201, 1349, 1719
HphI	GGTGA	7 cut(s)	235, 277, 513, 739, 897, 1304, 1829
Hpy166II	GTNNAC	4 cut(s)	655, 1417, 1492, 1713
Hpy188I	TCNGA	4 cut(s)	550, 719, 786, 1617
Hpy8I	GTNNAC	4 cut(s)	655, 1417, 1492, 1713
Hpy99I	CGWCG	2 cut(s)	761, 1055
HpyAV	CCTTC	3 cut(s)	428, 515, 578
HpyCH4III	ACNGT	3 cut(s)	247, 659, 1828
HpyCH4IV	ACGT	4 cut(s)	756, 992, 1027, 1189
HpyF10VI	GCNNNNNNNGC	4 cut(s)	700, 890, 1047, 1661
HpyF3I	CTNAG	3 cut(s)	446, 547, 785
HpySE526I	ACGT	4 cut(s)	756, 992, 1027, 1189
LmnI	GCTCC	1 cut(s)	1903
Lsp1109I	GCAGC	1 cut(s)	1348
LweI	GCATC	2 cut(s)	893, 910
MaeI	CTAG	2 cut(s)	1149, 1506
MaeII	ACGT	4 cut(s)	756, 992, 1027, 1189
MaeIII	GTNAC	7 cut(s)	70, 97, 1133, 1343, 1508, 1540, 1817
MboII	GAAGA	5 cut(s)	161, 275, 929, 1561, 1899
MfeI	CAATTG	1 cut(s)	20
MflI	RGATCY	2 cut(s)	105, 276
MhlI	GDGCHC	3 cut(s)	393, 793, 1853
MluI	ACGCGT	1 cut(s)	1212
MmeI	TCCRAC	3 cut(s)	641, 1013, 1087
Mph1103I	ATGCAT	1 cut(s)	671
MseI	TTAA	5 cut(s)	735, 825, 876, 1253, 1260
MspI	CCGG	4 cut(s)	102, 201, 1349, 1719
MspR9I	CCNGG	8 cut(s)	11, 103, 430, 1098, 1224, 1272, 1349, 1546
MunI	CAATTG	1 cut(s)	20
MvaI	CCWGG	6 cut(s)	11, 430, 1098, 1224, 1272, 1546
MvnI	CGCG	1 cut(s)	1214
MwoI	GCNNNNNNNGC	4 cut(s)	700, 890, 1047, 1661
NciI	CCSGG	2 cut(s)	103, 1349
NcoI	CCATGG	2 cut(s)	839, 1069
NlaIV	GGNNCC	5 cut(s)	107, 173, 214, 675, 1092
NmeAIII	GCCGAG	2 cut(s)	1044, 1489
NmuCI	GTSAC	2 cut(s)	1508, 1817
NsiI	ATGCAT	1 cut(s)	671
NspI	RCATGY	1 cut(s)	502
PasI	CCCWGGG	1 cut(s)	10
PcsI	WCGNNNNNNNCGW	1 cut(s)	384
PfeI	GAWTC	7 cut(s)	298, 899, 1219, 1368, 1675, 1688, 1869
Pfl23II	CGTACG	1 cut(s)	375
PflFI	GACNNNGTC	1 cut(s)	1607
PflMI	CCANNNNNTGG	2 cut(s)	294, 1319
PinAI	ACCGGT	1 cut(s)	1718
PkrI	GCNGC	1 cut(s)	1363
Ppu21I	YACGTR	2 cut(s)	1028, 1190
PpuMI	RGGWCCY	2 cut(s)	172, 808
Psp5II	RGGWCCY	2 cut(s)	172, 808
Psp6I	CCWGG	6 cut(s)	9, 428, 1096, 1222, 1270, 1544
PspEI	GGTNACC	2 cut(s)	1133, 1343
PspGI	CCWGG	6 cut(s)	9, 428, 1096, 1222, 1270, 1544
PspLI	CGTACG	1 cut(s)	375
PspN4I	GGNNCC	5 cut(s)	107, 173, 214, 675, 1092
PspPI	GGNCC	9 cut(s)	34, 172, 673, 728, 761, 808, 857, 1322, 1642
PspPPI	RGGWCCY	2 cut(s)	172, 808
PsuI	RGATCY	2 cut(s)	105, 276
PsyI	GACNNNGTC	1 cut(s)	1607
RsaI	GTAC	4 cut(s)	199, 377, 620, 948
RsaNI	GTAC	4 cut(s)	198, 376, 619, 947
SaqAI	TTAA	5 cut(s)	735, 825, 876, 1253, 1260
SatI	GCNGC	1 cut(s)	1362
Sau96I	GGNCC	9 cut(s)	34, 172, 673, 728, 761, 808, 857, 1322, 1642
ScrFI	CCNGG	8 cut(s)	11, 103, 430, 1098, 1224, 1272, 1349, 1546
SduI	GDGCHC	3 cut(s)	393, 793, 1853
SfaNI	GCATC	2 cut(s)	893, 910
SfcI	CTRYAG	2 cut(s)	582, 1771
SinI	GGWCC	6 cut(s)	34, 172, 673, 761, 808, 1322
SmlI	CTYRAG	2 cut(s)	1536, 1839
SmoI	CTYRAG	2 cut(s)	1536, 1839
SpeI	ACTAGT	1 cut(s)	1505
SsiI	CCGC	5 cut(s)	320, 726, 882, 1243, 1917
SspI	AATATT	2 cut(s)	1282, 1660
SspMI	CTAG	2 cut(s)	1149, 1506
StyD4I	CCNGG	8 cut(s)	9, 101, 428, 1096, 1222, 1270, 1347, 1544
StyI	CCWWGG	4 cut(s)	839, 1069, 1288, 1313
TaaI	ACNGT	3 cut(s)	247, 659, 1828
TaiI	ACGT	4 cut(s)	759, 995, 1030, 1192
TaqI	TCGA	2 cut(s)	1033, 1636
TaqII	GACCGA	2 cut(s)	531, 749
TatI	WGTACW	1 cut(s)	946
TfiI	GAWTC	7 cut(s)	298, 899, 1219, 1368, 1675, 1688, 1869
Tru1I	TTAA	5 cut(s)	735, 825, 876, 1253, 1260
Tru9I	TTAA	5 cut(s)	735, 825, 876, 1253, 1260
TscAI	CASTG	3 cut(s)	712, 1445, 1833
TseFI	GTSAC	2 cut(s)	1508, 1817
TseI	GCWGC	1 cut(s)	1361
Tsp45I	GTSAC	2 cut(s)	1508, 1817
TspDTI	ATGAA	3 cut(s)	162, 891, 1751
TspRI	CASTG	3 cut(s)	712, 1445, 1833
Tth111I	GACNNNGTC	1 cut(s)	1607
Van91I	CCANNNNNTGG	2 cut(s)	294, 1319
VpaK11BI	GGWCC	6 cut(s)	34, 172, 673, 761, 808, 1322
XagI	CCTNNNNNAGG	1 cut(s)	681
XapI	RAATTY	3 cut(s)	551, 643, 1758
XceI	RCATGY	1 cut(s)	502
XcmI	CCANNNNNNNNNTGG	2 cut(s)	837, 1861
XspI	CTAG	2 cut(s)	1149, 1506
Zsp2I	ATGCAT	1 cut(s)	671

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.