Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0002285

Physical Location & Seq

Genomic Coordinates Forward (+)

59140744 .. 59155888

Gene Structure 15145 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG438700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1923 bp

ATGTCGTCTCTGGGGGTGCAATTGCTTATTCAGGACGATCATGTGATTATGGATAACGGCACACTCCAAGTTGCATTATCAAATCCAGGTGGAATTGTTACTGGGATCCATTATAACGGCATTGACAATTTACTTGAAGTTCTGAATGAAGAGGATAATAGAGGGTACTGGGACCTTGTTTGGAGTGAAACGGGAAGTATCGGAACAACCGGAACCTATGATCGAATTATAGGAACAAAATTCACTGTTATAGTGAAAAGTGAAGAACAAGTAGAGATATCATTCACTAGAGAGTGGAATCACGAGGACAAGAATGTCCCGCTAAATATAGACAAAAGGTTTGTAATGCTTCGTAATTCGTCAGGCTTCTACTCGTACGCCATCTACGAGCACTTGAAAGAATGGCCTCCTTTCAACCTTCCCCAAACCAGGATTGTGTTCAAGCTCAGTAAAGAGAAGTTTCAGTACATGGCGATAGCTGATGACAGGCAAAGAAACATGCCCCTTCCTGACGACCGATTACCCGAACGATGCCAAATCCTAAATTCAGATTTCCCAGAAGCAGTCCTTCTTGTCAATCCTATAGAGCCACAATATACGGGAGAGGTGGATGACAAGTACCAATACTCATGCGAGAACCAAAATTTGCGGGTTCACGGCTGGACATGCATGGATCCTCATGTAGGGTTTTGGCAGATAACGCCTAGTGATGAGTTCCGATCCGGCGGACCTCTTAAACAGAACCTCACATCCCACGTCGGTCCTATTTGTCTTGCAATGTTTCTGAGTGCTCACTATTCAGGAGAGGATCTTGTGCTGAAACTTAAACCAGATGAGCCATGGAAGAAAGTTTTCGGCCCTGTTTTTTTCTATCTTAATTCTGCATCTGATGCAAAAGATTCATCACCACTCTGGGAAGATGCAAAGAAGCAGATGATGACAGAAGTAAAAAGCTGGCCTTATGAGTTTCCAGCTTCCACTGATTTTCCAACGTCAAAGCAACGGGGTAATGTTAGTGGTGGAATACGTGTTGGAGATAGCTTTGTTAGCGACGATCACATTCTTGGCCATGGTGCTTATGTTGGATTGGCACCACCTGGAGATGTTGGATCATGGCAAAGAGATTGCAAGGGTTACCAGTTCTGGACTAGGGCAGATGAGAATGGCTATTACTCTATCAAAAATATACGCGAGGGGAATTATAATCTCTACGCGTGGGTTCCTGGGTTTATCGGAGATTACCGCTATGGTTTAACCATTGACATAACTCCAGGTTGTGATATTGACCTTGGTAGTCTTGTATATGAGCCTCCAAGGGATGGACCAACATTGTGGGAAATTGGTTACCCGGATCGCTCTGCTGCTGGATTCTATGTTCCTGATCCTAATCCAAAGTATATCAATAAACTTTATATAAACCATCCTGACAGGTTTAGGCAGTGGGGGTTATGGGAAAGATATGCCGAGTTATATCCTAATGAGGATTTAGTTTACACTATTGGAACTAGTGACTATACTAAAGATTGGTTCTTTGCTCAAGTTACCAGGAAGAACGATGATGACACATATCAAGGGACTACATGGAAAATCAAGTTTCAGCTTGACAATGTCAGTCAGACCAAAATCTACAAACTTCGATTGGCCCTTGCTACTGCAAATATTGCAGAATTACAGATTCGCATAAATGATTCCAAAGCAGACCCTCCTCTGTTTACGACCGGTGTGATCGGACACGACAACACAATTTGCAGACATGGAATTCATGGTCTCTACCGGCTGTATACAATAGACGTACCCGGCACACTGCTTGTGAAAGGTGACAATACAGTGTTTCTAACGCAAGCATTGAGCACCAGCCCTTTCGTGGGGATCATGTATGACTATATTCGTTTAGAAGCCCCATCATCTTCAACTTCCGCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0003674 GO:0003824 GO:0005975 GO:0005976 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010393 GO:0016052 GO:0016829 GO:0016835 GO:0016837 GO:0017144 GO:0042737 GO:0043170 GO:0044237 GO:0044238 GO:0044248 GO:0045488 GO:0045490 GO:0071704 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CBM-like Rhamnogal_lyase fn3_3

Protein Analysis

640

Amino Acids

72.9

Weight (kDa)

5.07

Isoelectric Point (pI)

32.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rhamnogal_lyase	PF06045	6 - 203	4.4e-86	Rhamnogalacturonate lyase family
fn3_3	PF14686	357 - 429	1.9e-26	Polysaccharide lyase family 4, domain II
CBM-like	PF14683	443 - 631	8e-52	Polysaccharide lyase family 4, domain III

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002285)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24430 AT4G24430
fragaria_vesca	FvH4_5g34131 FvH4_5g34131 FvH4_5g34131 FvH4_5g34131 FvH4_5g34150
malus_domestica	MD08G1204400.v1.1 MD08G1205000.v1.1
prunus_persica	Prupe.1G536600_v2.0.a1 Prupe.1G536600_v2.0.a1 Prupe.1G536600_v2.0.a1 Prupe.1G536700_v2.0.a1 Prupe.1G536700_v2.0.a1
pyrus_communis	pycom08g17670 pycom08g17720
rosa_chinensis	RchiOBHm_Chr7g0233711 RchiOBHm_Chr7g0233721 RchiOBHm_Chr7g0233731 RchiOBHm_Chr7g0233741
rosa_laevigata	RLG00000001237 RLG00000001239 RLG00000001240
rosa_multiflora	Rmu_sc0000740.1_g000047 Rmu_sc0000740.1_g000058 Rmu_sc0010145.1_g000001 Rmu_sc0011583.1_g000004
rosa_roxburghii	Rroxscaffold_3G00227030 Rroxscaffold_3G00227050 Rroxscaffold_3G00227070
rosa_rugosa	Rorug07G0282300 Rorug07G0282300
rosa_samantha	Rh7AG438600 Rh7AG438700 Rh7BG411300 Rh7CG458200 Rh7CG458300 Rh7CG458400 Rh7DG428200
rosa_wichuraiana	Rw7G036170 Rw7G036180 Rw7G036230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	114, 1203
AasI	GACNNNNNNGTC	1 cut(s)	314
AccB1I	GGYRCC	1 cut(s)	1090
AccB7I	CCANNNNNTGG	1 cut(s)	1319
AccI	GTMKAC	1 cut(s)	1781
AccII	CGCG	2 cut(s)	1191, 1214
AciI	CCGC	5 cut(s)	320, 649, 726, 1243, 1917
AcoI	YGGCCR	1 cut(s)	1066
AcsI	RAATTY	4 cut(s)	239, 544, 643, 1758
AfaI	GTAC	5 cut(s)	167, 377, 467, 620, 1794
AfiI	CCNNNNNNNGG	5 cut(s)	429, 683, 1319, 1864, 1865
AflIII	ACRYGT	2 cut(s)	1027, 1212
AgeI	ACCGGT	1 cut(s)	1718
AgsI	TTSAA	5 cut(s)	137, 397, 415, 442, 1911
AhlI	ACTAGT	1 cut(s)	1505
AjiI	CACGTC	1 cut(s)	757
AjnI	CCWGG	6 cut(s)	85, 428, 1096, 1222, 1270, 1544
AloI	GAACNNNNNNTCC	4 cut(s)	734, 766, 1359, 1391
AluBI	AGCT	6 cut(s)	445, 479, 954, 974, 1041, 1600
AluI	AGCT	6 cut(s)	445, 479, 954, 974, 1041, 1600
Alw21I	GWGCWC	3 cut(s)	393, 793, 1853
Alw26I	GTCTC	2 cut(s)	12, 1772
AoxI	GGCC	5 cut(s)	404, 856, 956, 1066, 1641
ApeKI	GCWGC	1 cut(s)	1361
ApoI	RAATTY	4 cut(s)	239, 544, 643, 1758
ArsI	GACNNNNNNTTYG	2 cut(s)	323, 355
AsiGI	ACCGGT	1 cut(s)	1718
Asp700I	GAANNNNTTC	1 cut(s)	851
AspS9I	GGNCC	6 cut(s)	172, 728, 761, 857, 1322, 1642
AsuC2I	CCSGG	2 cut(s)	1349, 1797
AsuHPI	GGTGA	2 cut(s)	897, 1829
AvaII	GGWCC	4 cut(s)	172, 728, 761, 1322
BalI	TGGCCA	1 cut(s)	1068
BamHI	GGATCC	2 cut(s)	105, 673
BanI	GGYRCC	1 cut(s)	1090
BarI	GAAGNNNNNNTAC	2 cut(s)	449, 481
BauI	CACGAG	1 cut(s)	302
Bbv12I	GWGCWC	3 cut(s)	393, 793, 1853
BbvI	GCAGC	1 cut(s)	1348
BccI	CCATC	4 cut(s)	389, 1313, 1428, 1909
BceAI	ACGGC	3 cut(s)	73, 133, 673
BciT130I	CCWGG	6 cut(s)	87, 430, 1098, 1224, 1272, 1546
BcnI	CCSGG	2 cut(s)	1349, 1797
BcoDI	GTCTC	2 cut(s)	12, 1772
BcuI	ACTAGT	1 cut(s)	1505
BfaI	CTAG	4 cut(s)	288, 705, 1149, 1506
BfmI	CTRYAG	1 cut(s)	582
BisI	GCNGC	1 cut(s)	1362
BlsI	GCNGC	1 cut(s)	1363
Bme1390I	CCNGG	8 cut(s)	87, 430, 1098, 1224, 1272, 1349, 1546, 1797
Bme18I	GGWCC	4 cut(s)	172, 728, 761, 1322
BmgBI	CACGTC	1 cut(s)	757
BmgT120I	GGNCC	6 cut(s)	172, 728, 761, 857, 1322, 1642
BmiI	GGNNCC	6 cut(s)	107, 173, 214, 675, 1092, 1221
BmrFI	CCNGG	8 cut(s)	87, 430, 1098, 1224, 1272, 1349, 1546, 1797
BmrI	ACTGGG	2 cut(s)	111, 178
BmsI	GCATC	4 cut(s)	521, 880, 893, 910
BmuI	ACTGGG	2 cut(s)	111, 178
BpmI	CTGGAG	2 cut(s)	1119, 1254
BpuEI	CTTGAG	1 cut(s)	1521
BpuMI	CCSGG	2 cut(s)	1349, 1797
BsaAI	YACGTR	1 cut(s)	1028
BsaBI	GATNNNNATC	1 cut(s)	1386
BsaI	GGTCTC	1 cut(s)	1772
BsaJI	CCNNGG	5 cut(s)	839, 1069, 1223, 1288, 1313
BsaWI	WCCGGW	2 cut(s)	209, 1718
Bsc4I	CCNNNNNNNGG	5 cut(s)	429, 683, 1319, 1864, 1865
Bse118I	RCCGGY	2 cut(s)	1718, 1773
Bse1I	ACTGG	3 cut(s)	106, 173, 1138
Bse3DI	GCAATG	1 cut(s)	783
Bse8I	GATNNNNATC	1 cut(s)	1386
BseBI	CCWGG	6 cut(s)	87, 430, 1098, 1224, 1272, 1546
BseDI	CCNNGG	5 cut(s)	839, 1069, 1223, 1288, 1313
BseGI	GGATG	4 cut(s)	616, 749, 1324, 1420
BseJI	GATNNNNATC	1 cut(s)	1386
BseLI	CCNNNNNNNGG	5 cut(s)	429, 683, 1319, 1864, 1865
BseMI	GCAATG	1 cut(s)	783
BseMII	CTCAG	2 cut(s)	460, 776
BseNI	ACTGG	3 cut(s)	106, 173, 1138
BseRI	GAGGAG	1 cut(s)	1695
BseXI	GCAGC	1 cut(s)	1348
Bsh1236I	CGCG	2 cut(s)	1191, 1214
Bsh1285I	CGRYCG	2 cut(s)	517, 1719
BshFI	GGCC	5 cut(s)	406, 858, 958, 1068, 1643
BshNI	GGYRCC	1 cut(s)	1090
BshTI	ACCGGT	1 cut(s)	1718
BsiEI	CGRYCG	2 cut(s)	517, 1719
BsiHKAI	GWGCWC	3 cut(s)	393, 793, 1853
BsiSI	CCGG	6 cut(s)	210, 723, 1349, 1719, 1774, 1797
BsiWI	CGTACG	1 cut(s)	375
BslFI	GGGAC	3 cut(s)	185, 302, 1588
BslI	CCNNNNNNNGG	5 cut(s)	429, 683, 1319, 1864, 1865
BsmAI	GTCTC	2 cut(s)	12, 1772
BsmBI	CGTCTC	1 cut(s)	12
BsmFI	GGGAC	3 cut(s)	185, 302, 1588
BsnI	GGCC	5 cut(s)	406, 858, 958, 1068, 1643
Bso31I	GGTCTC	1 cut(s)	1772
Bsp1286I	GDGCHC	3 cut(s)	393, 793, 1853
Bsp19I	CCATGG	2 cut(s)	839, 1069
BspACI	CCGC	5 cut(s)	320, 649, 726, 1243, 1917
BspANI	GGCC	5 cut(s)	406, 858, 958, 1068, 1643
BspCNI	CTCAG	2 cut(s)	459, 777
BspFNI	CGCG	2 cut(s)	1191, 1214
BspLI	GGNNCC	6 cut(s)	107, 173, 214, 675, 1092, 1221
BspT107I	GGYRCC	1 cut(s)	1090
BspTNI	GGTCTC	1 cut(s)	1772
BsrDI	GCAATG	1 cut(s)	783
BsrFI	RCCGGY	2 cut(s)	1718, 1773
BsrI	ACTGG	3 cut(s)	106, 173, 1138
BssAI	RCCGGY	2 cut(s)	1718, 1773
BssECI	CCNNGG	5 cut(s)	839, 1069, 1223, 1288, 1313
BssNAI	GTATAC	1 cut(s)	1782
BssSI	CACGAG	1 cut(s)	302
BssT1I	CCWWGG	4 cut(s)	839, 1069, 1288, 1313
Bst1107I	GTATAC	1 cut(s)	1782
Bst2BI	CACGAG	1 cut(s)	302
Bst2UI	CCWGG	6 cut(s)	87, 430, 1098, 1224, 1272, 1546
Bst4CI	ACNGT	2 cut(s)	247, 1828
Bst6I	CTCTTC	1 cut(s)	144
BstAPI	GCANNNNNTGC	2 cut(s)	890, 1661
BstBAI	YACGTR	1 cut(s)	1028
BstC8I	GCNNGC	2 cut(s)	956, 1842
BstDEI	CTNAG	2 cut(s)	446, 785
BstDSI	CCRYGG	2 cut(s)	839, 1069
BstEII	GGTNACC	2 cut(s)	1133, 1343
BstENI	CCTNNNNNAGG	1 cut(s)	681
BstF5I	GGATG	4 cut(s)	616, 749, 1324, 1420
BstFNI	CGCG	2 cut(s)	1191, 1214
BstMAI	GTCTC	2 cut(s)	12, 1772
BstMCI	CGRYCG	2 cut(s)	517, 1719
BstMWI	GCNNNNNNNGC	5 cut(s)	666, 700, 890, 1047, 1661
BstNI	CCWGG	6 cut(s)	87, 430, 1098, 1224, 1272, 1546
BstNSI	RCATGY	2 cut(s)	502, 669
BstPI	GGTNACC	2 cut(s)	1133, 1343
BstSCI	CCNGG	8 cut(s)	85, 428, 1096, 1222, 1270, 1347, 1544, 1795
BstSFI	CTRYAG	1 cut(s)	582
BstUI	CGCG	2 cut(s)	1191, 1214
BstV1I	GCAGC	1 cut(s)	1348
BstX2I	RGATCY	3 cut(s)	105, 673, 808
BstXI	CCANNNNNNTGG	1 cut(s)	1332
BstYI	RGATCY	3 cut(s)	105, 673, 808
BstZ17I	GTATAC	1 cut(s)	1782
BsuRI	GGCC	5 cut(s)	406, 858, 958, 1068, 1643
BtgI	CCRYGG	2 cut(s)	839, 1069
BtrI	CACGTC	1 cut(s)	757
BtsCI	GGATG	4 cut(s)	616, 749, 1324, 1420
BtsI	GCAGTG	2 cut(s)	1445, 1802
BtsIMutI	CAGTG	5 cut(s)	243, 978, 1445, 1802, 1833
Cac8I	GCNNGC	2 cut(s)	956, 1842
Cfr10I	RCCGGY	2 cut(s)	1718, 1773
Cfr13I	GGNCC	6 cut(s)	172, 728, 761, 857, 1322, 1642
Csp6I	GTAC	5 cut(s)	166, 376, 466, 619, 1793
CspAI	ACCGGT	1 cut(s)	1718
CviQI	GTAC	5 cut(s)	166, 376, 466, 619, 1793
DdeI	CTNAG	2 cut(s)	446, 785
DrdI	GACNNNNNNGTC	1 cut(s)	314
DseDI	GACNNNNNNGTC	1 cut(s)	314
EaeI	YGGCCR	1 cut(s)	1066
Eam1104I	CTCTTC	1 cut(s)	144
EarI	CTCTTC	1 cut(s)	144
EciI	GGCGGA	2 cut(s)	741, 1906
Eco130I	CCWWGG	4 cut(s)	839, 1069, 1288, 1313
Eco31I	GGTCTC	1 cut(s)	1772
Eco32I	GATATC	1 cut(s)	279
Eco47I	GGWCC	4 cut(s)	172, 728, 761, 1322
Eco91I	GGTNACC	2 cut(s)	1133, 1343
EcoNI	CCTNNNNNAGG	1 cut(s)	681
EcoO109I	RGGNCCY	1 cut(s)	172
EcoO65I	GGTNACC	2 cut(s)	1133, 1343
EcoRI	GAATTC	1 cut(s)	1758
EcoRII	CCWGG	6 cut(s)	85, 428, 1096, 1222, 1270, 1544
EcoRV	GATATC	1 cut(s)	279
EcoT14I	CCWWGG	4 cut(s)	839, 1069, 1288, 1313
EcoT22I	ATGCAT	1 cut(s)	671
ErhI	CCWWGG	4 cut(s)	839, 1069, 1288, 1313
Esp3I	CGTCTC	1 cut(s)	12
FalI	AAGNNNNNCTT	4 cut(s)	552, 584, 943, 975
FaqI	GGGAC	3 cut(s)	185, 302, 1588
FauI	CCCGC	2 cut(s)	327, 642
FblI	GTMKAC	1 cut(s)	1781
Fnu4HI	GCNGC	1 cut(s)	1362
FokI	GGATG	4 cut(s)	623, 736, 1331, 1407
Fsp4HI	GCNGC	1 cut(s)	1362
FspBI	CTAG	4 cut(s)	288, 705, 1149, 1506
GluI	GCNGC	1 cut(s)	1362
GsuI	CTGGAG	2 cut(s)	1119, 1254
HaeIII	GGCC	5 cut(s)	406, 858, 958, 1068, 1643
HapII	CCGG	6 cut(s)	210, 723, 1349, 1719, 1774, 1797
HinfI	GANTC	5 cut(s)	298, 899, 1368, 1675, 1688
HpaII	CCGG	6 cut(s)	210, 723, 1349, 1719, 1774, 1797
HphI	GGTGA	2 cut(s)	897, 1829
Hpy166II	GTNNAC	4 cut(s)	655, 1492, 1713, 1782
Hpy188I	TCNGA	9 cut(s)	144, 203, 550, 719, 786, 889, 1235, 1617, 1730
Hpy188III	TCNNGA	7 cut(s)	32, 302, 509, 801, 1144, 1379, 1424
Hpy8I	GTNNAC	4 cut(s)	655, 1492, 1713, 1782
Hpy99I	CGWCG	2 cut(s)	761, 1055
HpyAV	CCTTC	3 cut(s)	428, 515, 578
HpyCH4III	ACNGT	2 cut(s)	247, 1828
HpyCH4IV	ACGT	4 cut(s)	756, 992, 1027, 1791
HpyF10VI	GCNNNNNNNGC	5 cut(s)	666, 700, 890, 1047, 1661
HpyF3I	CTNAG	2 cut(s)	446, 785
HpySE526I	ACGT	4 cut(s)	756, 992, 1027, 1791
Lsp1109I	GCAGC	1 cut(s)	1348
LweI	GCATC	4 cut(s)	521, 880, 893, 910
MaeI	CTAG	4 cut(s)	288, 705, 1149, 1506
MaeII	ACGT	4 cut(s)	756, 992, 1027, 1791
MaeIII	GTNAC	6 cut(s)	97, 1133, 1343, 1508, 1540, 1817
MboII	GAAGA	6 cut(s)	161, 275, 856, 929, 1561, 1899
MfeI	CAATTG	1 cut(s)	20
MflI	RGATCY	3 cut(s)	105, 673, 808
MhlI	GDGCHC	3 cut(s)	393, 793, 1853
MlsI	TGGCCA	1 cut(s)	1068
MluI	ACGCGT	1 cut(s)	1212
MluNI	TGGCCA	1 cut(s)	1068
MmeI	TCCRAC	4 cut(s)	1012, 1013, 1063, 1087
Mox20I	TGGCCA	1 cut(s)	1068
Mph1103I	ATGCAT	1 cut(s)	671
MroXI	GAANNNNTTC	1 cut(s)	851
MscI	TGGCCA	1 cut(s)	1068
MseI	TTAA	4 cut(s)	735, 825, 876, 1253
Msp20I	TGGCCA	1 cut(s)	1068
MspI	CCGG	6 cut(s)	210, 723, 1349, 1719, 1774, 1797
MspR9I	CCNGG	8 cut(s)	87, 430, 1098, 1224, 1272, 1349, 1546, 1797
MunI	CAATTG	1 cut(s)	20
MvaI	CCWGG	6 cut(s)	87, 430, 1098, 1224, 1272, 1546
MvnI	CGCG	2 cut(s)	1191, 1214
MwoI	GCNNNNNNNGC	5 cut(s)	666, 700, 890, 1047, 1661
NciI	CCSGG	2 cut(s)	1349, 1797
NcoI	CCATGG	2 cut(s)	839, 1069
NlaIV	GGNNCC	6 cut(s)	107, 173, 214, 675, 1092, 1221
NmeAIII	GCCGAG	1 cut(s)	1489
NmuCI	GTSAC	2 cut(s)	1508, 1817
NsiI	ATGCAT	1 cut(s)	671
NspI	RCATGY	2 cut(s)	502, 669
PcsI	WCGNNNNNNNCGW	1 cut(s)	384
PdmI	GAANNNNTTC	1 cut(s)	851
PfeI	GAWTC	5 cut(s)	298, 899, 1368, 1675, 1688
Pfl23II	CGTACG	1 cut(s)	375
PflFI	GACNNNGTC	1 cut(s)	1607
PflMI	CCANNNNNTGG	1 cut(s)	1319
PinAI	ACCGGT	1 cut(s)	1718
PkrI	GCNGC	1 cut(s)	1363
Ppu21I	YACGTR	1 cut(s)	1028
PpuMI	RGGWCCY	1 cut(s)	172
PsiI	TTATAA	2 cut(s)	114, 1203
Psp5II	RGGWCCY	1 cut(s)	172
Psp6I	CCWGG	6 cut(s)	85, 428, 1096, 1222, 1270, 1544
PspEI	GGTNACC	2 cut(s)	1133, 1343
PspGI	CCWGG	6 cut(s)	85, 428, 1096, 1222, 1270, 1544
PspLI	CGTACG	1 cut(s)	375
PspN4I	GGNNCC	6 cut(s)	107, 173, 214, 675, 1092, 1221
PspPI	GGNCC	6 cut(s)	172, 728, 761, 857, 1322, 1642
PspPPI	RGGWCCY	1 cut(s)	172
PsuI	RGATCY	3 cut(s)	105, 673, 808
PsyI	GACNNNGTC	1 cut(s)	1607
RsaI	GTAC	5 cut(s)	167, 377, 467, 620, 1794
RsaNI	GTAC	5 cut(s)	166, 376, 466, 619, 1793
SaqAI	TTAA	4 cut(s)	735, 825, 876, 1253
SatI	GCNGC	1 cut(s)	1362
Sau96I	GGNCC	6 cut(s)	172, 728, 761, 857, 1322, 1642
ScrFI	CCNGG	8 cut(s)	87, 430, 1098, 1224, 1272, 1349, 1546, 1797
SduI	GDGCHC	3 cut(s)	393, 793, 1853
SfaNI	GCATC	4 cut(s)	521, 880, 893, 910
SfcI	CTRYAG	1 cut(s)	582
SinI	GGWCC	4 cut(s)	172, 728, 761, 1322
SmlI	CTYRAG	1 cut(s)	1536
SmoI	CTYRAG	1 cut(s)	1536
SpeI	ACTAGT	1 cut(s)	1505
SsiI	CCGC	5 cut(s)	320, 649, 726, 1243, 1917
SspI	AATATT	1 cut(s)	1660
SspMI	CTAG	4 cut(s)	288, 705, 1149, 1506
StyD4I	CCNGG	8 cut(s)	85, 428, 1096, 1222, 1270, 1347, 1544, 1795
StyI	CCWWGG	4 cut(s)	839, 1069, 1288, 1313
TaaI	ACNGT	2 cut(s)	247, 1828
TaiI	ACGT	4 cut(s)	759, 995, 1030, 1794
TaqI	TCGA	2 cut(s)	223, 1636
TaqII	GACCGA	2 cut(s)	531, 749
TatI	WGTACW	1 cut(s)	465
TfiI	GAWTC	5 cut(s)	298, 899, 1368, 1675, 1688
Tru1I	TTAA	4 cut(s)	735, 825, 876, 1253
Tru9I	TTAA	4 cut(s)	735, 825, 876, 1253
TscAI	CASTG	5 cut(s)	250, 985, 1445, 1809, 1833
TseFI	GTSAC	2 cut(s)	1508, 1817
TseI	GCWGC	1 cut(s)	1361
Tsp45I	GTSAC	2 cut(s)	1508, 1817
TspDTI	ATGAA	3 cut(s)	162, 891, 1751
TspRI	CASTG	5 cut(s)	250, 985, 1445, 1809, 1833
Tth111I	GACNNNGTC	1 cut(s)	1607
Van91I	CCANNNNNTGG	1 cut(s)	1319
VpaK11BI	GGWCC	4 cut(s)	172, 728, 761, 1322
XagI	CCTNNNNNAGG	1 cut(s)	681
XapI	RAATTY	4 cut(s)	239, 544, 643, 1758
XceI	RCATGY	2 cut(s)	502, 669
XcmI	CCANNNNNNNNNTGG	2 cut(s)	837, 1861
XmiI	GTMKAC	1 cut(s)	1781
XmnI	GAANNNNTTC	1 cut(s)	851
XspI	CTAG	4 cut(s)	288, 705, 1149, 1506
Zsp2I	ATGCAT	1 cut(s)	671

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.