Rhamnogalacturonate lyase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G24430 AT4G24430 |
| fragaria_vesca | FvH4_5g34131 FvH4_5g34131 FvH4_5g34131 FvH4_5g34131 FvH4_5g34150 |
| malus_domestica | MD08G1204400.v1.1 MD08G1205000.v1.1 |
| prunus_persica | Prupe.1G536600_v2.0.a1 Prupe.1G536600_v2.0.a1 Prupe.1G536600_v2.0.a1 Prupe.1G536700_v2.0.a1 Prupe.1G536700_v2.0.a1 |
| pyrus_communis | pycom08g17670 pycom08g17720 |
| rosa_chinensis | RchiOBHm_Chr7g0233711 RchiOBHm_Chr7g0233721 RchiOBHm_Chr7g0233731 RchiOBHm_Chr7g0233741 |
| rosa_laevigata | RLG00000001237 RLG00000001239 RLG00000001240 |
| rosa_multiflora | Rmu_sc0000740.1_g000047 Rmu_sc0000740.1_g000058 Rmu_sc0010145.1_g000001 Rmu_sc0011583.1_g000004 |
| rosa_roxburghii | Rroxscaffold_3G00227030 Rroxscaffold_3G00227050 Rroxscaffold_3G00227070 |
| rosa_rugosa | Rorug07G0282300 Rorug07G0282300 |
| rosa_samantha | Rh7AG438600 Rh7AG438700 Rh7BG411300 Rh7CG458200 Rh7CG458300 Rh7CG458400 Rh7DG428200 |
| rosa_wichuraiana | Rw7G036170 Rw7G036180 Rw7G036230 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 296 |
| Acc36I | ACCTGC | 1 cut(s) | 1208 |
| AccB1I | GGYRCC | 2 cut(s) | 829, 1036 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1265 |
| AccI | GTMKAC | 1 cut(s) | 1727 |
| AccII | CGCG | 1 cut(s) | 975 |
| AccIII | TCCGGA | 1 cut(s) | 460 |
| AciI | CCGC | 4 cut(s) | 272, 431, 455, 1215 |
| AclI | AACGTT | 1 cut(s) | 1605 |
| AclWI | GGATC | 5 cut(s) | 614, 627, 762, 1063, 1322 |
| AcoI | YGGCCR | 2 cut(s) | 423, 902 |
| AcsI | RAATTY | 3 cut(s) | 539, 1313, 1704 |
| AdeI | CACNNNGTG | 1 cut(s) | 1527 |
| AfaI | GTAC | 5 cut(s) | 419, 894, 908, 989, 1740 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 381, 629, 1265, 1810, 1811 |
| AflIII | ACRYGT | 1 cut(s) | 973 |
| AgeI | ACCGGT | 1 cut(s) | 1664 |
| AgsI | TTSAA | 4 cut(s) | 89, 349, 394, 980 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 850 |
| AjnI | CCWGG | 5 cut(s) | 37, 380, 1168, 1490, 1809 |
| AluBI | AGCT | 3 cut(s) | 397, 769, 1354 |
| AluI | AGCT | 3 cut(s) | 397, 769, 1354 |
| Alw21I | GWGCWC | 3 cut(s) | 345, 739, 1799 |
| Alw26I | GTCTC | 4 cut(s) | 1041, 1461, 1718, 1758 |
| AlwI | GGATC | 5 cut(s) | 614, 627, 762, 1063, 1322 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 592 |
| Aor13HI | TCCGGA | 1 cut(s) | 460 |
| AoxI | GGCC | 5 cut(s) | 356, 423, 706, 802, 902 |
| ApeKI | GCWGC | 1 cut(s) | 1307 |
| ApoI | RAATTY | 3 cut(s) | 539, 1313, 1704 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1460, 1492 |
| AsiGI | ACCGGT | 1 cut(s) | 1664 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 411 |
| AspS9I | GGNCC | 6 cut(s) | 124, 674, 707, 803, 1268, 1844 |
| AsuC2I | CCSGG | 2 cut(s) | 1044, 1743 |
| AsuHPI | GGTGA | 3 cut(s) | 685, 1250, 1641 |
| AsuII | TTCGAA | 1 cut(s) | 1582 |
| AvaII | GGWCC | 4 cut(s) | 124, 674, 1268, 1844 |
| AxyI | CCTNAGG | 1 cut(s) | 1422 |
| BalI | TGGCCA | 1 cut(s) | 425 |
| BamHI | GGATCC | 1 cut(s) | 619 |
| BanI | GGYRCC | 2 cut(s) | 829, 1036 |
| Bbv12I | GWGCWC | 3 cut(s) | 345, 739, 1799 |
| BbvI | GCAGC | 1 cut(s) | 1294 |
| BccI | CCATC | 6 cut(s) | 341, 531, 946, 1374, 1499, 1855 |
| BceAI | ACGGC | 2 cut(s) | 25, 889 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 828, 862, 1139, 1173 |
| BciT130I | CCWGG | 5 cut(s) | 39, 382, 1170, 1492, 1811 |
| BcnI | CCSGG | 2 cut(s) | 1044, 1743 |
| BcoDI | GTCTC | 4 cut(s) | 1041, 1461, 1718, 1758 |
| BfaI | CTAG | 2 cut(s) | 1095, 1464 |
| BfmI | CTRYAG | 1 cut(s) | 1616 |
| BfuAI | ACCTGC | 1 cut(s) | 1208 |
| BisI | GCNGC | 2 cut(s) | 455, 1308 |
| BlsI | GCNGC | 2 cut(s) | 456, 1309 |
| Bme1390I | CCNGG | 7 cut(s) | 39, 382, 1044, 1170, 1492, 1743, 1811 |
| Bme18I | GGWCC | 4 cut(s) | 124, 674, 1268, 1844 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 850 |
| BmgT120I | GGNCC | 6 cut(s) | 124, 674, 707, 803, 1268, 1844 |
| BmiI | GGNNCC | 6 cut(s) | 125, 251, 621, 831, 1038, 1167 |
| BmrFI | CCNGG | 7 cut(s) | 39, 382, 1044, 1170, 1492, 1743, 1811 |
| BmsI | GCATC | 5 cut(s) | 81, 826, 856, 929, 1299 |
| Bpu14I | TTCGAA | 1 cut(s) | 1582 |
| BpuMI | CCSGG | 2 cut(s) | 1044, 1743 |
| Bsa29I | ATCGAT | 1 cut(s) | 1189 |
| BsaAI | YACGTR | 3 cut(s) | 991, 1136, 1527 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1332 |
| BsaI | GGTCTC | 1 cut(s) | 1718 |
| BsaJI | CCNNGG | 3 cut(s) | 785, 1259, 1810 |
| BsaWI | WCCGGW | 4 cut(s) | 161, 460, 832, 1664 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 680, 710 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 381, 629, 1265, 1810, 1811 |
| Bse118I | RCCGGY | 2 cut(s) | 1664, 1719 |
| Bse1I | ACTGG | 4 cut(s) | 58, 251, 1084, 1475 |
| Bse21I | CCTNAGG | 1 cut(s) | 1422 |
| Bse3DI | GCAATG | 4 cut(s) | 661, 729, 1748, 1797 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1332 |
| BseAI | TCCGGA | 1 cut(s) | 460 |
| BseBI | CCWGG | 5 cut(s) | 39, 382, 1170, 1492, 1811 |
| BseCI | ATCGAT | 1 cut(s) | 1189 |
| BseDI | CCNNGG | 3 cut(s) | 785, 1259, 1810 |
| BseGI | GGATG | 7 cut(s) | 469, 523, 841, 871, 1290, 1366, 1507 |
| BseJI | GATNNNNATC | 1 cut(s) | 1332 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 381, 629, 1265, 1810, 1811 |
| BseMI | GCAATG | 4 cut(s) | 661, 729, 1748, 1797 |
| BseMII | CTCAG | 3 cut(s) | 412, 745, 1413 |
| BseNI | ACTGG | 4 cut(s) | 58, 251, 1084, 1475 |
| BseRI | GAGGAG | 1 cut(s) | 1439 |
| BseXI | GCAGC | 1 cut(s) | 1294 |
| BseYI | CCCAGC | 1 cut(s) | 650 |
| Bsh1236I | CGCG | 1 cut(s) | 975 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1665 |
| BshFI | GGCC | 5 cut(s) | 358, 425, 708, 804, 904 |
| BshNI | GGYRCC | 2 cut(s) | 829, 1036 |
| BshTI | ACCGGT | 1 cut(s) | 1664 |
| BshVI | ATCGAT | 1 cut(s) | 1189 |
| BsiEI | CGRYCG | 1 cut(s) | 1665 |
| BsiHKAI | GWGCWC | 3 cut(s) | 345, 739, 1799 |
| BsiSI | CCGG | 7 cut(s) | 162, 461, 833, 1043, 1665, 1720, 1743 |
| BsiWI | CGTACG | 1 cut(s) | 906 |
| BslFI | GGGAC | 4 cut(s) | 137, 254, 1307, 1827 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 381, 629, 1265, 1810, 1811 |
| BsmAI | GTCTC | 4 cut(s) | 1041, 1461, 1718, 1758 |
| BsmBI | CGTCTC | 1 cut(s) | 1041 |
| BsmFI | GGGAC | 4 cut(s) | 137, 254, 1307, 1827 |
| BsnI | GGCC | 5 cut(s) | 358, 425, 708, 804, 904 |
| Bso31I | GGTCTC | 1 cut(s) | 1718 |
| Bsp119I | TTCGAA | 1 cut(s) | 1582 |
| Bsp1286I | GDGCHC | 3 cut(s) | 345, 739, 1799 |
| Bsp13I | TCCGGA | 1 cut(s) | 460 |
| Bsp19I | CCATGG | 1 cut(s) | 785 |
| BspACI | CCGC | 4 cut(s) | 272, 431, 455, 1215 |
| BspANI | GGCC | 5 cut(s) | 358, 425, 708, 804, 904 |
| BspCNI | CTCAG | 3 cut(s) | 411, 744, 1414 |
| BspDI | ATCGAT | 1 cut(s) | 1189 |
| BspEI | TCCGGA | 1 cut(s) | 460 |
| BspFNI | CGCG | 1 cut(s) | 975 |
| BspHI | TCATGA | 1 cut(s) | 925 |
| BspLI | GGNNCC | 6 cut(s) | 125, 251, 621, 831, 1038, 1167 |
| BspMI | ACCTGC | 1 cut(s) | 1208 |
| BspPI | GGATC | 5 cut(s) | 614, 627, 762, 1063, 1322 |
| BspT104I | TTCGAA | 1 cut(s) | 1582 |
| BspT107I | GGYRCC | 2 cut(s) | 829, 1036 |
| BspTNI | GGTCTC | 1 cut(s) | 1718 |
| BsrDI | GCAATG | 4 cut(s) | 661, 729, 1748, 1797 |
| BsrFI | RCCGGY | 2 cut(s) | 1664, 1719 |
| BsrI | ACTGG | 4 cut(s) | 58, 251, 1084, 1475 |
| BssAI | RCCGGY | 2 cut(s) | 1664, 1719 |
| BssECI | CCNNGG | 3 cut(s) | 785, 1259, 1810 |
| BssNAI | GTATAC | 1 cut(s) | 1728 |
| BssT1I | CCWWGG | 2 cut(s) | 785, 1259 |
| Bst1107I | GTATAC | 1 cut(s) | 1728 |
| Bst2UI | CCWGG | 5 cut(s) | 39, 382, 1170, 1492, 1811 |
| Bst4CI | ACNGT | 3 cut(s) | 199, 1019, 1444 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 836, 1607 |
| BstBAI | YACGTR | 3 cut(s) | 991, 1136, 1527 |
| BstBI | TTCGAA | 1 cut(s) | 1582 |
| BstDEI | CTNAG | 4 cut(s) | 398, 731, 959, 1422 |
| BstDSI | CCRYGG | 1 cut(s) | 785 |
| BstF5I | GGATG | 7 cut(s) | 469, 523, 841, 871, 1290, 1366, 1507 |
| BstFNI | CGCG | 1 cut(s) | 975 |
| BstMAI | GTCTC | 4 cut(s) | 1041, 1461, 1718, 1758 |
| BstMCI | CGRYCG | 1 cut(s) | 1665 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 271, 836, 972, 1019, 1607 |
| BstNI | CCWGG | 5 cut(s) | 39, 382, 1170, 1492, 1811 |
| BstNSI | RCATGY | 2 cut(s) | 269, 454 |
| BstSCI | CCNGG | 7 cut(s) | 37, 380, 1042, 1168, 1490, 1741, 1809 |
| BstSFI | CTRYAG | 1 cut(s) | 1616 |
| BstSNI | TACGTA | 1 cut(s) | 991 |
| BstUI | CGCG | 1 cut(s) | 975 |
| BstV1I | GCAGC | 1 cut(s) | 1294 |
| BstX2I | RGATCY | 3 cut(s) | 619, 754, 1327 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1278 |
| BstYI | RGATCY | 3 cut(s) | 619, 754, 1327 |
| BstZ17I | GTATAC | 1 cut(s) | 1728 |
| Bsu15I | ATCGAT | 1 cut(s) | 1189 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1422 |
| BsuRI | GGCC | 5 cut(s) | 358, 425, 708, 804, 904 |
| BsuTUI | ATCGAT | 1 cut(s) | 1189 |
| BtgI | CCRYGG | 1 cut(s) | 785 |
| BtsCI | GGATG | 7 cut(s) | 469, 523, 841, 871, 1290, 1366, 1507 |
| BtsI | GCAGTG | 1 cut(s) | 1596 |
| BtsIMutI | CAGTG | 2 cut(s) | 739, 1596 |
| BveI | ACCTGC | 1 cut(s) | 1208 |
| CaiI | CAGNNNCTG | 1 cut(s) | 592 |
| CciI | TCATGA | 1 cut(s) | 925 |
| Cfr10I | RCCGGY | 2 cut(s) | 1664, 1719 |
| Cfr13I | GGNCC | 6 cut(s) | 124, 674, 707, 803, 1268, 1844 |
| ClaI | ATCGAT | 1 cut(s) | 1189 |
| CseI | GACGC | 1 cut(s) | 1058 |
| CsiI | ACCWGGT | 1 cut(s) | 37 |
| Csp6I | GTAC | 5 cut(s) | 418, 893, 907, 988, 1739 |
| CspAI | ACCGGT | 1 cut(s) | 1664 |
| CviQI | GTAC | 5 cut(s) | 418, 893, 907, 988, 1739 |
| DdeI | CTNAG | 4 cut(s) | 398, 731, 959, 1422 |
| DraIII | CACNNNGTG | 1 cut(s) | 1527 |
| DriI | GACNNNNNGTC | 1 cut(s) | 850 |
| EaeI | YGGCCR | 2 cut(s) | 423, 902 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 850 |
| Eco105I | TACGTA | 1 cut(s) | 991 |
| Eco130I | CCWWGG | 2 cut(s) | 785, 1259 |
| Eco31I | GGTCTC | 1 cut(s) | 1718 |
| Eco32I | GATATC | 1 cut(s) | 231 |
| Eco47I | GGWCC | 4 cut(s) | 124, 674, 1268, 1844 |
| Eco81I | CCTNAGG | 1 cut(s) | 1422 |
| EcoO109I | RGGNCCY | 1 cut(s) | 124 |
| EcoRI | GAATTC | 1 cut(s) | 1704 |
| EcoRII | CCWGG | 5 cut(s) | 37, 380, 1168, 1490, 1809 |
| EcoRV | GATATC | 1 cut(s) | 231 |
| EcoT14I | CCWWGG | 2 cut(s) | 785, 1259 |
| EcoT22I | ATGCAT | 2 cut(s) | 617, 1162 |
| ErhI | CCWWGG | 2 cut(s) | 785, 1259 |
| Esp3I | CGTCTC | 1 cut(s) | 1041 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 985, 1017 |
| FaqI | GGGAC | 4 cut(s) | 137, 254, 1307, 1827 |
| FauI | CCCGC | 1 cut(s) | 279 |
| FblI | GTMKAC | 1 cut(s) | 1727 |
| Fnu4HI | GCNGC | 2 cut(s) | 455, 1308 |
| FokI | GGATG | 7 cut(s) | 476, 510, 848, 878, 1277, 1353, 1514 |
| Fsp4HI | GCNGC | 2 cut(s) | 455, 1308 |
| FspBI | CTAG | 2 cut(s) | 1095, 1464 |
| GluI | GCNGC | 2 cut(s) | 455, 1308 |
| GsaI | CCCAGC | 1 cut(s) | 654 |
| HaeIII | GGCC | 5 cut(s) | 358, 425, 708, 804, 904 |
| HapII | CCGG | 7 cut(s) | 162, 461, 833, 1043, 1665, 1720, 1743 |
| HgaI | GACGC | 1 cut(s) | 1058 |
| HincII | GTYRAC | 1 cut(s) | 1363 |
| HindII | GTYRAC | 1 cut(s) | 1363 |
| HinfI | GANTC | 5 cut(s) | 589, 845, 1634, 1646, 1815 |
| HpaII | CCGG | 7 cut(s) | 162, 461, 833, 1043, 1665, 1720, 1743 |
| HphI | GGTGA | 3 cut(s) | 685, 1250, 1641 |
| Hpy166II | GTNNAC | 6 cut(s) | 195, 674, 1268, 1363, 1440, 1728 |
| Hpy188I | TCNGA | 6 cut(s) | 96, 155, 943, 1107, 1563, 1676 |
| Hpy188III | TCNNGA | 9 cut(s) | 404, 461, 503, 747, 926, 980, 1090, 1370, 1421 |
| Hpy8I | GTNNAC | 6 cut(s) | 195, 674, 1268, 1363, 1440, 1728 |
| Hpy99I | CGWCG | 1 cut(s) | 632 |
| HpyAV | CCTTC | 5 cut(s) | 380, 787, 1492, 1754, 1835 |
| HpyCH4III | ACNGT | 3 cut(s) | 199, 1019, 1444 |
| HpyCH4IV | ACGT | 7 cut(s) | 990, 1135, 1209, 1485, 1526, 1605, 1737 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 271, 836, 972, 1019, 1607 |
| HpyF3I | CTNAG | 4 cut(s) | 398, 731, 959, 1422 |
| HpySE526I | ACGT | 7 cut(s) | 990, 1135, 1209, 1485, 1526, 1605, 1737 |
| Kpn2I | TCCGGA | 1 cut(s) | 460 |
| Lsp1109I | GCAGC | 1 cut(s) | 1294 |
| LweI | GCATC | 5 cut(s) | 81, 826, 856, 929, 1299 |
| MabI | ACCWGGT | 1 cut(s) | 37 |
| MaeI | CTAG | 2 cut(s) | 1095, 1464 |
| MaeII | ACGT | 7 cut(s) | 990, 1135, 1209, 1485, 1526, 1605, 1737 |
| MaeIII | GTNAC | 6 cut(s) | 22, 49, 643, 852, 1210, 1486 |
| MboII | GAAGA | 3 cut(s) | 506, 802, 1507 |
| MflI | RGATCY | 3 cut(s) | 619, 754, 1327 |
| MhlI | GDGCHC | 3 cut(s) | 345, 739, 1799 |
| MlsI | TGGCCA | 1 cut(s) | 425 |
| MluI | ACGCGT | 1 cut(s) | 973 |
| MluNI | TGGCCA | 1 cut(s) | 425 |
| MlyI | GAGTC | 2 cut(s) | 839, 1809 |
| MmeI | TCCRAC | 2 cut(s) | 133, 587 |
| Mox20I | TGGCCA | 1 cut(s) | 425 |
| Mph1103I | ATGCAT | 2 cut(s) | 617, 1162 |
| MroI | TCCGGA | 1 cut(s) | 460 |
| MroXI | GAANNNNTTC | 1 cut(s) | 411 |
| MscI | TGGCCA | 1 cut(s) | 425 |
| MseI | TTAA | 6 cut(s) | 180, 366, 681, 822, 1206, 1628 |
| Msp20I | TGGCCA | 1 cut(s) | 425 |
| MspI | CCGG | 7 cut(s) | 162, 461, 833, 1043, 1665, 1720, 1743 |
| MspR9I | CCNGG | 7 cut(s) | 39, 382, 1044, 1170, 1492, 1743, 1811 |
| MvaI | CCWGG | 5 cut(s) | 39, 382, 1170, 1492, 1811 |
| MvnI | CGCG | 1 cut(s) | 975 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 271, 836, 972, 1019, 1607 |
| NciI | CCSGG | 2 cut(s) | 1044, 1743 |
| NcoI | CCATGG | 1 cut(s) | 785 |
| NlaIV | GGNNCC | 6 cut(s) | 125, 251, 621, 831, 1038, 1167 |
| NmuCI | GTSAC | 1 cut(s) | 852 |
| NsiI | ATGCAT | 2 cut(s) | 617, 1162 |
| NspI | RCATGY | 2 cut(s) | 269, 454 |
| NspV | TTCGAA | 1 cut(s) | 1582 |
| PagI | TCATGA | 1 cut(s) | 925 |
| PdmI | GAANNNNTTC | 1 cut(s) | 411 |
| PfeI | GAWTC | 3 cut(s) | 589, 1634, 1646 |
| Pfl23II | CGTACG | 1 cut(s) | 906 |
| PflFI | GACNNNGTC | 1 cut(s) | 1553 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1265 |
| PfoI | TCCNGGA | 1 cut(s) | 1042 |
| PinAI | ACCGGT | 1 cut(s) | 1664 |
| PkrI | GCNGC | 2 cut(s) | 456, 1309 |
| PleI | GAGTC | 2 cut(s) | 839, 1809 |
| PpsI | GAGTC | 2 cut(s) | 839, 1809 |
| Ppu21I | YACGTR | 3 cut(s) | 991, 1136, 1527 |
| PpuMI | RGGWCCY | 1 cut(s) | 124 |
| PsiI | TTATAA | 1 cut(s) | 296 |
| Psp1406I | AACGTT | 1 cut(s) | 1605 |
| Psp5II | RGGWCCY | 1 cut(s) | 124 |
| Psp6I | CCWGG | 5 cut(s) | 37, 380, 1168, 1490, 1809 |
| PspFI | CCCAGC | 1 cut(s) | 650 |
| PspGI | CCWGG | 5 cut(s) | 37, 380, 1168, 1490, 1809 |
| PspLI | CGTACG | 1 cut(s) | 906 |
| PspN4I | GGNNCC | 6 cut(s) | 125, 251, 621, 831, 1038, 1167 |
| PspPI | GGNCC | 6 cut(s) | 124, 674, 707, 803, 1268, 1844 |
| PspPPI | RGGWCCY | 1 cut(s) | 124 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1605, 1637 |
| PstNI | CAGNNNCTG | 1 cut(s) | 592 |
| PsuI | RGATCY | 3 cut(s) | 619, 754, 1327 |
| PsyI | GACNNNGTC | 1 cut(s) | 1553 |
| RsaI | GTAC | 5 cut(s) | 419, 894, 908, 989, 1740 |
| RsaNI | GTAC | 5 cut(s) | 418, 893, 907, 988, 1739 |
| SaqAI | TTAA | 6 cut(s) | 180, 366, 681, 822, 1206, 1628 |
| SatI | GCNGC | 2 cut(s) | 455, 1308 |
| Sau96I | GGNCC | 6 cut(s) | 124, 674, 707, 803, 1268, 1844 |
| SchI | GAGTC | 2 cut(s) | 839, 1809 |
| ScrFI | CCNGG | 7 cut(s) | 39, 382, 1044, 1170, 1492, 1743, 1811 |
| SduI | GDGCHC | 3 cut(s) | 345, 739, 1799 |
| SexAI | ACCWGGT | 1 cut(s) | 37 |
| SfaNI | GCATC | 5 cut(s) | 81, 826, 856, 929, 1299 |
| SfcI | CTRYAG | 1 cut(s) | 1616 |
| SfuI | TTCGAA | 1 cut(s) | 1582 |
| SinI | GGWCC | 4 cut(s) | 124, 674, 1268, 1844 |
| SnaBI | TACGTA | 1 cut(s) | 991 |
| SsiI | CCGC | 4 cut(s) | 272, 431, 455, 1215 |
| SspMI | CTAG | 2 cut(s) | 1095, 1464 |
| StyD4I | CCNGG | 7 cut(s) | 37, 380, 1042, 1168, 1490, 1741, 1809 |
| StyI | CCWWGG | 2 cut(s) | 785, 1259 |
| TaaI | ACNGT | 3 cut(s) | 199, 1019, 1444 |
| TaiI | ACGT | 7 cut(s) | 993, 1138, 1212, 1488, 1529, 1608, 1740 |
| TaqI | TCGA | 5 cut(s) | 555, 664, 1189, 1543, 1582 |
| TaqII | GACCGA | 1 cut(s) | 483 |
| TatI | WGTACW | 1 cut(s) | 892 |
| TauI | GCSGC | 1 cut(s) | 457 |
| TfiI | GAWTC | 3 cut(s) | 589, 1634, 1646 |
| Tru1I | TTAA | 6 cut(s) | 180, 366, 681, 822, 1206, 1628 |
| Tru9I | TTAA | 6 cut(s) | 180, 366, 681, 822, 1206, 1628 |
| TscAI | CASTG | 2 cut(s) | 739, 1603 |
| TseFI | GTSAC | 1 cut(s) | 852 |
| TseI | GCWGC | 1 cut(s) | 1307 |
| Tsp45I | GTSAC | 1 cut(s) | 852 |
| TspDTI | ATGAA | 3 cut(s) | 1212, 1266, 1697 |
| TspGWI | ACGGA | 1 cut(s) | 1823 |
| TspRI | CASTG | 2 cut(s) | 739, 1603 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1553 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1265 |
| VpaK11BI | GGWCC | 4 cut(s) | 124, 674, 1268, 1844 |
| XapI | RAATTY | 3 cut(s) | 539, 1313, 1704 |
| XceI | RCATGY | 2 cut(s) | 269, 454 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 783 |
| XmiI | GTMKAC | 1 cut(s) | 1727 |
| XmnI | GAANNNNTTC | 1 cut(s) | 411 |
| XspI | CTAG | 2 cut(s) | 1095, 1464 |
| Zsp2I | ATGCAT | 2 cut(s) | 617, 1162 |