Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000740.1

Orthogroup ID

OG0002285

Physical Location & Seq

Genomic Coordinates Reverse (-)

233853 .. 240949

Gene Structure 7097 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000740.1_g000058.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1866 bp

atggataacggcacactccaagttacattatcaaatccaggtggaattgttactgggatccattataacggcattgacaatttacttgaagttctcaatgaagaggataatagagggtactgggaccttgtttggagtgaaacgggaagtatcggaacaaccggaacctatgatcgaattataggaacaaaattcactgttatagtgaaaagtgaagaacaagtagagatatcattcactagagagtggaatcacgaggacaagaatgtcccgctaaatatagacaaaaggtttgtaatgcttcgtaattcgccaggcttctactcgtacgccatctacgagcacttgaaagaatggcctcctttcaaccttccccaaaccaggattgtgttcaagctcagtaaagagaagtttcagtacatggcgatagctgatgacaggcaaagaaacatgccccttcctgacgaccgattacccgaacgatgccaaatcctaaattcagatttcccagaagcagtccttcttgtcaatcctatagagccacaatatgcgggagaggtggatgacaagtaccaatactcatgcgagaaccaaaatttgcgggttcacggttggacatgcatggaccctcttgtagggttttggcagataacgcctagtgatgagttccgatccggcggacctcttaaacagaacctcacatcccacgtcggtcctatttgtcttgcaatgtttctgagtgctcactattcaggagaggatcttgtgctgaaacttaaaccagatgagccatggaagaaagttttcggccctgtttttatctatcttaattctgcatctgatgcaaaagattcatcacaactctgggaagatgcaaagaaacagatgatgacagaagtaaaaagctggccttatgagtttccagcttccactgattttccaacgtcaaagcaacggggtaatgttagtggtagaatacgtgttcgagatagcgacgatcacatactcggccatggtgcttatgttggattggcaccacctggagatgttggatcatggcaaagagattgcaagggttaccagttctggactagggcagatgagaatggctattactctatcaaaaatatacgcgaggggaactataatctctacgcgtgggttcctgggtttatcggagattaccgctatggtttaaccattgacataactccaggttgtgatattgaccttggtagtcttgtatatgagcctccaagggatggaccaacattgtgggaaattggttacccggatcgctctgctgctggattctatgttccagatcctaatccaaagtatatcaataaactttatgtaaaccatcctgacaggtttaggcagtggggcttatgggaaagatatgcagagttatatcctaatgaggatttagtttacactattggaactagtgactatactaaagattggttctttgctcaagttaccaggaagaacgatgatggcacatatcaagggactacatggaaaatcaagtttcagcttgacaatgtcagtcagaccaaaatctacaaacttcgattggccctcgctactgcaaatattgcagaattacagattcgcataaatgattccaaagcagaccctcctctgtttacgaccggtgtgatcggacacgacaacacaatttgcagacatggaattcatggtctctaccgtctgtatacaatagacgtacccggcacattgcttgtgaagggtgacaatacagtgtttctaacgcaagcattgagcaccagccctttcgtggggatcatgtatgactatattcgtttagaagccccatcatcttcaacttccgcctaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0003674 GO:0003824 GO:0005975 GO:0005976 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010393 GO:0016052 GO:0016829 GO:0016835 GO:0016837 GO:0017144 GO:0042737 GO:0043170 GO:0044237 GO:0044238 GO:0044248 GO:0045488 GO:0045490 GO:0071704 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CBM-like Rhamnogal_lyase fn3_3

Protein Analysis

621

Amino Acids

70.93

Weight (kDa)

5.22

Isoelectric Point (pI)

31.97

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002285)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24430 AT4G24430
fragaria_vesca	FvH4_5g34131 FvH4_5g34131 FvH4_5g34131 FvH4_5g34131 FvH4_5g34150
malus_domestica	MD08G1204400.v1.1 MD08G1205000.v1.1
prunus_persica	Prupe.1G536600_v2.0.a1 Prupe.1G536600_v2.0.a1 Prupe.1G536600_v2.0.a1 Prupe.1G536700_v2.0.a1 Prupe.1G536700_v2.0.a1
pyrus_communis	pycom08g17670 pycom08g17720
rosa_chinensis	RchiOBHm_Chr7g0233711 RchiOBHm_Chr7g0233721 RchiOBHm_Chr7g0233731 RchiOBHm_Chr7g0233741
rosa_laevigata	RLG00000001237 RLG00000001239 RLG00000001240
rosa_multiflora	Rmu_sc0000740.1_g000047 Rmu_sc0000740.1_g000058 Rmu_sc0010145.1_g000001 Rmu_sc0011583.1_g000004
rosa_roxburghii	Rroxscaffold_3G00227030 Rroxscaffold_3G00227050 Rroxscaffold_3G00227070
rosa_rugosa	Rorug07G0282300 Rorug07G0282300
rosa_samantha	Rh7AG438600 Rh7AG438700 Rh7BG411300 Rh7CG458200 Rh7CG458300 Rh7CG458400 Rh7DG428200
rosa_wichuraiana	Rw7G036170 Rw7G036180 Rw7G036230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	66
AasI	GACNNNNNNGTC	1 cut(s)	266
AccB1I	GGYRCC	1 cut(s)	1033
AccB7I	CCANNNNNTGG	1 cut(s)	1262
AccI	GTMKAC	1 cut(s)	1724
AccII	CGCG	2 cut(s)	1134, 1157
AciI	CCGC	6 cut(s)	272, 551, 601, 678, 1186, 1860
AclWI	GGATC	8 cut(s)	52, 65, 666, 768, 1060, 1302, 1319, 1820
AcoI	YGGCCR	1 cut(s)	1009
AcsI	RAATTY	4 cut(s)	191, 496, 595, 1701
AfaI	GTAC	5 cut(s)	119, 329, 419, 572, 1737
AfiI	CCNNNNNNNGG	5 cut(s)	381, 635, 1262, 1807, 1808
AflIII	ACRYGT	2 cut(s)	979, 1155
AgeI	ACCGGT	1 cut(s)	1661
AgsI	TTSAA	5 cut(s)	89, 349, 367, 394, 1854
AhlI	ACTAGT	1 cut(s)	1448
AjiI	CACGTC	1 cut(s)	709
AjnI	CCWGG	7 cut(s)	37, 313, 380, 1039, 1165, 1213, 1487
AloI	GAACNNNNNNTCC	4 cut(s)	686, 718, 1302, 1334
AluBI	AGCT	5 cut(s)	397, 431, 906, 926, 1543
AluI	AGCT	5 cut(s)	397, 431, 906, 926, 1543
Alw21I	GWGCWC	3 cut(s)	345, 745, 1796
Alw26I	GTCTC	1 cut(s)	1715
AlwI	GGATC	8 cut(s)	52, 65, 666, 768, 1060, 1302, 1319, 1820
AoxI	GGCC	5 cut(s)	356, 808, 908, 1009, 1584
ApeKI	GCWGC	1 cut(s)	1304
ApoI	RAATTY	4 cut(s)	191, 496, 595, 1701
ArsI	GACNNNNNNTTYG	2 cut(s)	275, 307
AsiGI	ACCGGT	1 cut(s)	1661
Asp700I	GAANNNNTTC	1 cut(s)	803
AspS9I	GGNCC	7 cut(s)	124, 625, 680, 713, 809, 1265, 1585
AsuC2I	CCSGG	2 cut(s)	1292, 1740
AsuHPI	GGTGA	1 cut(s)	1772
AvaII	GGWCC	5 cut(s)	124, 625, 680, 713, 1265
BamHI	GGATCC	1 cut(s)	57
BanI	GGYRCC	1 cut(s)	1033
BarI	GAAGNNNNNNTAC	2 cut(s)	401, 433
BauI	CACGAG	1 cut(s)	254
Bbv12I	GWGCWC	3 cut(s)	345, 745, 1796
BbvI	GCAGC	1 cut(s)	1291
BccI	CCATC	5 cut(s)	341, 1256, 1371, 1496, 1852
BceAI	ACGGC	2 cut(s)	25, 85
BciT130I	CCWGG	7 cut(s)	39, 315, 382, 1041, 1167, 1215, 1489
BcnI	CCSGG	2 cut(s)	1292, 1740
BcoDI	GTCTC	1 cut(s)	1715
BcuI	ACTAGT	1 cut(s)	1448
BfaI	CTAG	4 cut(s)	240, 657, 1092, 1449
BfmI	CTRYAG	1 cut(s)	534
BisI	GCNGC	1 cut(s)	1305
BlsI	GCNGC	1 cut(s)	1306
Bme1390I	CCNGG	9 cut(s)	39, 315, 382, 1041, 1167, 1215, 1292, 1489, 1740
Bme18I	GGWCC	5 cut(s)	124, 625, 680, 713, 1265
BmgBI	CACGTC	1 cut(s)	709
BmgT120I	GGNCC	7 cut(s)	124, 625, 680, 713, 809, 1265, 1585
BmiI	GGNNCC	6 cut(s)	59, 125, 166, 627, 1035, 1164
BmrFI	CCNGG	9 cut(s)	39, 315, 382, 1041, 1167, 1215, 1292, 1489, 1740
BmrI	ACTGGG	2 cut(s)	63, 130
BmsI	GCATC	4 cut(s)	473, 832, 845, 862
BmuI	ACTGGG	2 cut(s)	63, 130
BpmI	CTGGAG	2 cut(s)	1062, 1197
BpuEI	CTTGAG	1 cut(s)	1464
BpuMI	CCSGG	2 cut(s)	1292, 1740
BsaAI	YACGTR	1 cut(s)	980
BsaBI	GATNNNNATC	1 cut(s)	1329
BsaI	GGTCTC	1 cut(s)	1715
BsaJI	CCNNGG	5 cut(s)	791, 1012, 1166, 1231, 1256
BsaWI	WCCGGW	2 cut(s)	161, 1661
Bsc4I	CCNNNNNNNGG	5 cut(s)	381, 635, 1262, 1807, 1808
Bse118I	RCCGGY	1 cut(s)	1661
Bse1I	ACTGG	3 cut(s)	58, 125, 1081
Bse3DI	GCAATG	2 cut(s)	735, 1745
Bse8I	GATNNNNATC	1 cut(s)	1329
BseBI	CCWGG	7 cut(s)	39, 315, 382, 1041, 1167, 1215, 1489
BseDI	CCNNGG	5 cut(s)	791, 1012, 1166, 1231, 1256
BseGI	GGATG	4 cut(s)	568, 701, 1267, 1363
BseJI	GATNNNNATC	1 cut(s)	1329
BseLI	CCNNNNNNNGG	5 cut(s)	381, 635, 1262, 1807, 1808
BseMI	GCAATG	2 cut(s)	735, 1745
BseMII	CTCAG	2 cut(s)	412, 728
BseNI	ACTGG	3 cut(s)	58, 125, 1081
BseRI	GAGGAG	1 cut(s)	1638
BseXI	GCAGC	1 cut(s)	1291
Bsh1236I	CGCG	2 cut(s)	1134, 1157
Bsh1285I	CGRYCG	2 cut(s)	469, 1662
BshFI	GGCC	5 cut(s)	358, 810, 910, 1011, 1586
BshNI	GGYRCC	1 cut(s)	1033
BshTI	ACCGGT	1 cut(s)	1661
BsiEI	CGRYCG	2 cut(s)	469, 1662
BsiHKAI	GWGCWC	3 cut(s)	345, 745, 1796
BsiSI	CCGG	5 cut(s)	162, 675, 1292, 1662, 1740
BsiWI	CGTACG	1 cut(s)	327
BslFI	GGGAC	3 cut(s)	137, 254, 1531
BslI	CCNNNNNNNGG	5 cut(s)	381, 635, 1262, 1807, 1808
BsmAI	GTCTC	1 cut(s)	1715
BsmFI	GGGAC	3 cut(s)	137, 254, 1531
BsnI	GGCC	5 cut(s)	358, 810, 910, 1011, 1586
Bso31I	GGTCTC	1 cut(s)	1715
Bsp1286I	GDGCHC	3 cut(s)	345, 745, 1796
Bsp19I	CCATGG	2 cut(s)	791, 1012
BspACI	CCGC	6 cut(s)	272, 551, 601, 678, 1186, 1860
BspANI	GGCC	5 cut(s)	358, 810, 910, 1011, 1586
BspCNI	CTCAG	2 cut(s)	411, 729
BspFNI	CGCG	2 cut(s)	1134, 1157
BspLI	GGNNCC	6 cut(s)	59, 125, 166, 627, 1035, 1164
BspPI	GGATC	8 cut(s)	52, 65, 666, 768, 1060, 1302, 1319, 1820
BspT107I	GGYRCC	1 cut(s)	1033
BspTNI	GGTCTC	1 cut(s)	1715
BsrDI	GCAATG	2 cut(s)	735, 1745
BsrFI	RCCGGY	1 cut(s)	1661
BsrI	ACTGG	3 cut(s)	58, 125, 1081
BssAI	RCCGGY	1 cut(s)	1661
BssECI	CCNNGG	5 cut(s)	791, 1012, 1166, 1231, 1256
BssNAI	GTATAC	1 cut(s)	1725
BssSI	CACGAG	1 cut(s)	254
BssT1I	CCWWGG	4 cut(s)	791, 1012, 1231, 1256
Bst1107I	GTATAC	1 cut(s)	1725
Bst2BI	CACGAG	1 cut(s)	254
Bst2UI	CCWGG	7 cut(s)	39, 315, 382, 1041, 1167, 1215, 1489
Bst4CI	ACNGT	4 cut(s)	199, 611, 1718, 1771
Bst6I	CTCTTC	1 cut(s)	96
BstAPI	GCANNNNNTGC	2 cut(s)	842, 1604
BstBAI	YACGTR	1 cut(s)	980
BstC8I	GCNNGC	2 cut(s)	908, 1785
BstDEI	CTNAG	2 cut(s)	398, 737
BstDSI	CCRYGG	2 cut(s)	791, 1012
BstEII	GGTNACC	2 cut(s)	1076, 1286
BstENI	CCTNNNNNAGG	1 cut(s)	633
BstF5I	GGATG	4 cut(s)	568, 701, 1267, 1363
BstFNI	CGCG	2 cut(s)	1134, 1157
BstMAI	GTCTC	1 cut(s)	1715
BstMCI	CGRYCG	2 cut(s)	469, 1662
BstMWI	GCNNNNNNNGC	3 cut(s)	652, 842, 1604
BstNI	CCWGG	7 cut(s)	39, 315, 382, 1041, 1167, 1215, 1489
BstNSI	RCATGY	2 cut(s)	454, 621
BstPI	GGTNACC	2 cut(s)	1076, 1286
BstSCI	CCNGG	9 cut(s)	37, 313, 380, 1039, 1165, 1213, 1290, 1487, 1738
BstSFI	CTRYAG	1 cut(s)	534
BstUI	CGCG	2 cut(s)	1134, 1157
BstV1I	GCAGC	1 cut(s)	1291
BstX2I	RGATCY	3 cut(s)	57, 760, 1324
BstXI	CCANNNNNNTGG	1 cut(s)	1275
BstYI	RGATCY	3 cut(s)	57, 760, 1324
BstZ17I	GTATAC	1 cut(s)	1725
BsuRI	GGCC	5 cut(s)	358, 810, 910, 1011, 1586
BtgI	CCRYGG	2 cut(s)	791, 1012
BtrI	CACGTC	1 cut(s)	709
BtsCI	GGATG	4 cut(s)	568, 701, 1267, 1363
BtsI	GCAGTG	1 cut(s)	1388
BtsIMutI	CAGTG	4 cut(s)	195, 930, 1388, 1776
Cac8I	GCNNGC	2 cut(s)	908, 1785
Cfr10I	RCCGGY	1 cut(s)	1661
Cfr13I	GGNCC	7 cut(s)	124, 625, 680, 713, 809, 1265, 1585
Csp6I	GTAC	5 cut(s)	118, 328, 418, 571, 1736
CspAI	ACCGGT	1 cut(s)	1661
CviQI	GTAC	5 cut(s)	118, 328, 418, 571, 1736
DdeI	CTNAG	2 cut(s)	398, 737
DrdI	GACNNNNNNGTC	1 cut(s)	266
DseDI	GACNNNNNNGTC	1 cut(s)	266
EaeI	YGGCCR	1 cut(s)	1009
Eam1104I	CTCTTC	1 cut(s)	96
EarI	CTCTTC	1 cut(s)	96
EciI	GGCGGA	2 cut(s)	693, 1849
Eco130I	CCWWGG	4 cut(s)	791, 1012, 1231, 1256
Eco31I	GGTCTC	1 cut(s)	1715
Eco32I	GATATC	1 cut(s)	231
Eco47I	GGWCC	5 cut(s)	124, 625, 680, 713, 1265
Eco91I	GGTNACC	2 cut(s)	1076, 1286
EcoNI	CCTNNNNNAGG	1 cut(s)	633
EcoO109I	RGGNCCY	1 cut(s)	124
EcoO65I	GGTNACC	2 cut(s)	1076, 1286
EcoRI	GAATTC	1 cut(s)	1701
EcoRII	CCWGG	7 cut(s)	37, 313, 380, 1039, 1165, 1213, 1487
EcoRV	GATATC	1 cut(s)	231
EcoT14I	CCWWGG	4 cut(s)	791, 1012, 1231, 1256
EcoT22I	ATGCAT	1 cut(s)	623
ErhI	CCWWGG	4 cut(s)	791, 1012, 1231, 1256
FalI	AAGNNNNNCTT	4 cut(s)	504, 536, 895, 927
FaqI	GGGAC	3 cut(s)	137, 254, 1531
FauI	CCCGC	3 cut(s)	279, 544, 594
FblI	GTMKAC	1 cut(s)	1724
Fnu4HI	GCNGC	1 cut(s)	1305
FokI	GGATG	4 cut(s)	575, 688, 1274, 1350
Fsp4HI	GCNGC	1 cut(s)	1305
FspBI	CTAG	4 cut(s)	240, 657, 1092, 1449
GluI	GCNGC	1 cut(s)	1305
GsuI	CTGGAG	2 cut(s)	1062, 1197
HaeIII	GGCC	5 cut(s)	358, 810, 910, 1011, 1586
HapII	CCGG	5 cut(s)	162, 675, 1292, 1662, 1740
HinfI	GANTC	5 cut(s)	250, 851, 1311, 1618, 1631
HpaII	CCGG	5 cut(s)	162, 675, 1292, 1662, 1740
HphI	GGTGA	1 cut(s)	1772
Hpy166II	GTNNAC	5 cut(s)	607, 1360, 1435, 1656, 1725
Hpy188I	TCNGA	8 cut(s)	155, 502, 671, 738, 841, 1178, 1560, 1673
Hpy188III	TCNNGA	7 cut(s)	254, 461, 753, 986, 1087, 1322, 1367
Hpy8I	GTNNAC	5 cut(s)	607, 1360, 1435, 1656, 1725
Hpy99I	CGWCG	2 cut(s)	713, 998
HpyAV	CCTTC	4 cut(s)	380, 467, 530, 1750
HpyCH4III	ACNGT	4 cut(s)	199, 611, 1718, 1771
HpyCH4IV	ACGT	4 cut(s)	708, 944, 979, 1734
HpyF10VI	GCNNNNNNNGC	3 cut(s)	652, 842, 1604
HpyF3I	CTNAG	2 cut(s)	398, 737
HpySE526I	ACGT	4 cut(s)	708, 944, 979, 1734
Lsp1109I	GCAGC	1 cut(s)	1291
LweI	GCATC	4 cut(s)	473, 832, 845, 862
MaeI	CTAG	4 cut(s)	240, 657, 1092, 1449
MaeII	ACGT	4 cut(s)	708, 944, 979, 1734
MaeIII	GTNAC	7 cut(s)	22, 49, 1076, 1286, 1451, 1483, 1760
MboII	GAAGA	6 cut(s)	113, 227, 808, 881, 1504, 1842
MflI	RGATCY	3 cut(s)	57, 760, 1324
MhlI	GDGCHC	3 cut(s)	345, 745, 1796
MluI	ACGCGT	1 cut(s)	1155
MmeI	TCCRAC	4 cut(s)	593, 965, 1006, 1030
Mph1103I	ATGCAT	1 cut(s)	623
MroXI	GAANNNNTTC	1 cut(s)	803
MseI	TTAA	4 cut(s)	687, 777, 828, 1196
MspI	CCGG	5 cut(s)	162, 675, 1292, 1662, 1740
MspR9I	CCNGG	9 cut(s)	39, 315, 382, 1041, 1167, 1215, 1292, 1489, 1740
MvaI	CCWGG	7 cut(s)	39, 315, 382, 1041, 1167, 1215, 1489
MvnI	CGCG	2 cut(s)	1134, 1157
MwoI	GCNNNNNNNGC	3 cut(s)	652, 842, 1604
NciI	CCSGG	2 cut(s)	1292, 1740
NcoI	CCATGG	2 cut(s)	791, 1012
NlaIV	GGNNCC	6 cut(s)	59, 125, 166, 627, 1035, 1164
NmeAIII	GCCGAG	1 cut(s)	987
NmuCI	GTSAC	2 cut(s)	1451, 1760
NsiI	ATGCAT	1 cut(s)	623
NspI	RCATGY	2 cut(s)	454, 621
PcsI	WCGNNNNNNNCGW	1 cut(s)	336
PdmI	GAANNNNTTC	1 cut(s)	803
PfeI	GAWTC	5 cut(s)	250, 851, 1311, 1618, 1631
Pfl23II	CGTACG	1 cut(s)	327
PflFI	GACNNNGTC	1 cut(s)	1550
PflMI	CCANNNNNTGG	1 cut(s)	1262
PinAI	ACCGGT	1 cut(s)	1661
PkrI	GCNGC	1 cut(s)	1306
Ppu21I	YACGTR	1 cut(s)	980
PpuMI	RGGWCCY	1 cut(s)	124
PsiI	TTATAA	1 cut(s)	66
Psp5II	RGGWCCY	1 cut(s)	124
Psp6I	CCWGG	7 cut(s)	37, 313, 380, 1039, 1165, 1213, 1487
PspEI	GGTNACC	2 cut(s)	1076, 1286
PspGI	CCWGG	7 cut(s)	37, 313, 380, 1039, 1165, 1213, 1487
PspLI	CGTACG	1 cut(s)	327
PspN4I	GGNNCC	6 cut(s)	59, 125, 166, 627, 1035, 1164
PspPI	GGNCC	7 cut(s)	124, 625, 680, 713, 809, 1265, 1585
PspPPI	RGGWCCY	1 cut(s)	124
PsuI	RGATCY	3 cut(s)	57, 760, 1324
PsyI	GACNNNGTC	1 cut(s)	1550
RsaI	GTAC	5 cut(s)	119, 329, 419, 572, 1737
RsaNI	GTAC	5 cut(s)	118, 328, 418, 571, 1736
SaqAI	TTAA	4 cut(s)	687, 777, 828, 1196
SatI	GCNGC	1 cut(s)	1305
Sau96I	GGNCC	7 cut(s)	124, 625, 680, 713, 809, 1265, 1585
ScrFI	CCNGG	9 cut(s)	39, 315, 382, 1041, 1167, 1215, 1292, 1489, 1740
SduI	GDGCHC	3 cut(s)	345, 745, 1796
SfaNI	GCATC	4 cut(s)	473, 832, 845, 862
SfcI	CTRYAG	1 cut(s)	534
SinI	GGWCC	5 cut(s)	124, 625, 680, 713, 1265
SmlI	CTYRAG	1 cut(s)	1479
SmoI	CTYRAG	1 cut(s)	1479
SpeI	ACTAGT	1 cut(s)	1448
SsiI	CCGC	6 cut(s)	272, 551, 601, 678, 1186, 1860
SspI	AATATT	1 cut(s)	1603
SspMI	CTAG	4 cut(s)	240, 657, 1092, 1449
StyD4I	CCNGG	9 cut(s)	37, 313, 380, 1039, 1165, 1213, 1290, 1487, 1738
StyI	CCWWGG	4 cut(s)	791, 1012, 1231, 1256
TaaI	ACNGT	4 cut(s)	199, 611, 1718, 1771
TaiI	ACGT	4 cut(s)	711, 947, 982, 1737
TaqI	TCGA	3 cut(s)	175, 985, 1579
TaqII	GACCGA	2 cut(s)	483, 701
TatI	WGTACW	1 cut(s)	417
TfiI	GAWTC	5 cut(s)	250, 851, 1311, 1618, 1631
Tru1I	TTAA	4 cut(s)	687, 777, 828, 1196
Tru9I	TTAA	4 cut(s)	687, 777, 828, 1196
TscAI	CASTG	4 cut(s)	202, 937, 1388, 1776
TseFI	GTSAC	2 cut(s)	1451, 1760
TseI	GCWGC	1 cut(s)	1304
Tsp45I	GTSAC	2 cut(s)	1451, 1760
TspDTI	ATGAA	3 cut(s)	114, 843, 1694
TspRI	CASTG	4 cut(s)	202, 937, 1388, 1776
Tth111I	GACNNNGTC	1 cut(s)	1550
Van91I	CCANNNNNTGG	1 cut(s)	1262
VpaK11BI	GGWCC	5 cut(s)	124, 625, 680, 713, 1265
XagI	CCTNNNNNAGG	1 cut(s)	633
XapI	RAATTY	4 cut(s)	191, 496, 595, 1701
XceI	RCATGY	2 cut(s)	454, 621
XcmI	CCANNNNNNNNNTGG	2 cut(s)	789, 1804
XmiI	GTMKAC	1 cut(s)	1724
XmnI	GAANNNNTTC	1 cut(s)	803
XspI	CTAG	4 cut(s)	240, 657, 1092, 1449
Zsp2I	ATGCAT	1 cut(s)	623

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.