Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0002285

Physical Location & Seq

Genomic Coordinates Forward (+)

24831167 .. 24839109

Gene Structure 7943 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g34150.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1917 bp

ATGTCGTCCCAAGCTGTGAAATTGCATATTCAGGATCATCATGTTATTTTGGATAACGGCATACTTCAAGTTACACTATCAAAACCAGGTGGAATTATAACTGGAATACAATATAATGGCATCGACAATCTGCTTGAAATTCAGAATAAAGAATCTGATAGAGGGTATTGGGACCTTGTTTGGAGTGAAGCAGGAAGTGTCGGAACAACCGGAACATTTGATGTAATTAAAGGAACAAAGTTCACTGTAATAGTGGAAAGCGAGGAACAGGTAGAGATATCATTCACAAGAAACTGGAACCATAAGAACAAGCATGTCCCGCTAAATATAGACAAAAGGTTCATAATGCTTCGTAATTCCTCAGGCTTCTACTCGTATGCCATCTATGAGCACTTGAAAGAATGGCCTCCATTTAACCTTCCACAGACCAGGATTACATTCAAGCTCAGAAAAGATAAGTTTCAGTATATGGCCATAGCAGATAACAGGCAAAGAAATATGCCTCTTCCTGATGACCGATTACCAGATAGAAGCGAAGTTTTAGATTTTCCAGAGGCAGTTCTTCTTGTCAATCCCATAGAGCCAGAATTCAAAGGAGAGGTGGATGACAAGTACCAGTACTCCTCCAAGAACCAGAACTTGCAAGTTCACGGTTGGATATGCATGGATCCACCCGTAGGGTTCTGGCAAATAACACCCAGCAATGAGTTTCGATCTGGCGGACCTCTTAAACAGAACCTCTCCTCGCACGTTGGTCCCACTTGTCTTGCGATGTTTCTCAGTGCTCACTATTCAGGAGAAGACCTTGTGCTAAAGCTCAAGCCAGATGAGCCATGGAAGAAAGTGTTTGGTCCTATTTTTATCTATCTCAATTCCACACCCGAAGCAATAGACTCATTGTCGCTCTGGGAGGATGCAAAGAAACAGATGGTGACAGAAGTACAAACTTGGCCTTACAAGTTTCCAGCTTCTACCGACTTTCCACCATCACATGAACGGGGTAATCTTAGTGGCAGAATACAGGTTCAAGATAGGTACTTAAGTGACACTTACATACTCGCCAAAGGTGCTTATGTGGGCTTGGCACCCCCTGGAGACCCTGGATCATGGCAGAGAGATTGCAAGGGCTACCAGTTCTGGACAAGGGCAGATGAGAATGGTTATTACACTATAAATGATATACGTGAGGGCGCCTATGATCTATATGCATGGGTTCCTGGTTTTATAGGAGATTATCGCTATGATGAAACTATTAACATAACCGCAGGTTGTAATATTGACATTGGTGATACTGTATATAAACCGCCAAGAAGTGGACCAACATTGTGGGAAATTGGCATCCCTGATCGTTCTGCAGCTGAATTTTATGTTCCTGATCCTAATCCAAAGTATCTTAATAAACTTTATGTTAACCATCCTGACAGGTTTAGGCAGTATGGTTTATGGGAAAGATATGAAGATTTATATCCTGAGGAGGATTTAGTATACACCGTTGGTGTTAGTGACTATACTAAAGATTGGTTCTTCGCTCACGTTACCAGGAAGCAGGTTGATGGCAAGTATCAAGGAACTACATGGAAAATCAAGTTTCAACTTGACCATGTCAATCAGACAAAACCATACACACTTCGGATTGCCCTTGCTACTGCAAATGTTGCAGAATTACAGATTCGTGTAAATGATTCCAAAACAGACTCACCACTATTTACAACTGGAGTGATAGGAAAAGACAACACTATTGCTAGACATGGAATTCATGGGCTCTACTGGCTGTATAGCATAGACATACCGGGCACATTGCTTTTGGAAGGAGTAAATACAGTGTTTCTAACCCAAGCCATGAGCAGCAGCCCTGTCCAGGGCCTTATGTATGACTATATCCGTTTAGAAGGTCCATCATCTTCTACTTCTACCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CBM-like Rhamnogal_lyase fn3_3

Protein Analysis

639

Amino Acids

72.94

Weight (kDa)

5.53

Isoelectric Point (pI)

36.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rhamnogal_lyase	PF06045	4 - 201	3.1e-92	Rhamnogalacturonate lyase family
fn3_3	PF14686	354 - 427	6.6e-27	Polysaccharide lyase family 4, domain II
CBM-like	PF14683	441 - 629	2.7e-53	Polysaccharide lyase family 4, domain III

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002285)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24430 AT4G24430
fragaria_vesca	FvH4_5g34131 FvH4_5g34131 FvH4_5g34131 FvH4_5g34131 FvH4_5g34150
malus_domestica	MD08G1204400.v1.1 MD08G1205000.v1.1
prunus_persica	Prupe.1G536600_v2.0.a1 Prupe.1G536600_v2.0.a1 Prupe.1G536600_v2.0.a1 Prupe.1G536700_v2.0.a1 Prupe.1G536700_v2.0.a1
pyrus_communis	pycom08g17670 pycom08g17720
rosa_chinensis	RchiOBHm_Chr7g0233711 RchiOBHm_Chr7g0233721 RchiOBHm_Chr7g0233731 RchiOBHm_Chr7g0233741
rosa_laevigata	RLG00000001237 RLG00000001239 RLG00000001240
rosa_multiflora	Rmu_sc0000740.1_g000047 Rmu_sc0000740.1_g000058 Rmu_sc0010145.1_g000001 Rmu_sc0011583.1_g000004
rosa_roxburghii	Rroxscaffold_3G00227030 Rroxscaffold_3G00227050 Rroxscaffold_3G00227070
rosa_rugosa	Rorug07G0282300 Rorug07G0282300
rosa_samantha	Rh7AG438600 Rh7AG438700 Rh7BG411300 Rh7CG458200 Rh7CG458300 Rh7CG458400 Rh7DG428200
rosa_wichuraiana	Rw7G036170 Rw7G036180 Rw7G036230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	98
Acc36I	ACCTGC	2 cut(s)	1256, 1537
AccB1I	GGYRCC	2 cut(s)	1084, 1190
AccB7I	CCANNNNNTGG	1 cut(s)	1313
AccI	GTMKAC	1 cut(s)	1485
AciI	CCGC	4 cut(s)	320, 720, 1263, 1304
AclWI	GGATC	5 cut(s)	42, 662, 675, 1111, 1370
AcoI	YGGCCR	1 cut(s)	471
AcsI	RAATTY	4 cut(s)	138, 587, 1361, 1752
AcyI	GRCGYC	1 cut(s)	1191
AfaI	GTAC	4 cut(s)	614, 620, 942, 1037
AfiI	CCNNNNNNNGG	4 cut(s)	677, 1313, 1858, 1859
AflII	CTTAAG	1 cut(s)	1039
AgsI	TTSAA	7 cut(s)	68, 137, 397, 442, 592, 1028, 1592
AhdI	GACNNNNNGTC	1 cut(s)	898
AjnI	CCWGG	7 cut(s)	85, 428, 1090, 1099, 1216, 1538, 1857
AluBI	AGCT	5 cut(s)	14, 445, 817, 968, 1358
AluI	AGCT	5 cut(s)	14, 445, 817, 968, 1358
Alw21I	GWGCWC	2 cut(s)	393, 787
Alw26I	GTCTC	1 cut(s)	1089
AlwI	GGATC	5 cut(s)	42, 662, 675, 1111, 1370
AoxI	GGCC	4 cut(s)	404, 471, 950, 1861
ApeKI	GCWGC	3 cut(s)	1355, 1845, 1848
ApoI	RAATTY	4 cut(s)	138, 587, 1361, 1752
AspLEI	GCGC	1 cut(s)	1193
AspS9I	GGNCC	7 cut(s)	172, 722, 755, 851, 1316, 1861, 1892
AsuC2I	CCSGG	1 cut(s)	1791
AsuHPI	GGTGA	3 cut(s)	943, 1298, 1689
AvaII	GGWCC	6 cut(s)	172, 722, 755, 851, 1316, 1892
AxyI	CCTNAGG	2 cut(s)	361, 1470
BaeGI	GKGCMC	1 cut(s)	1796
BaeI	ACNNNNGTAYC	2 cut(s)	1027, 1060
BalI	TGGCCA	1 cut(s)	473
BamHI	GGATCC	1 cut(s)	667
BanI	GGYRCC	2 cut(s)	1084, 1190
BanII	GRGCYC	1 cut(s)	1764
BbsI	GAAGAC	1 cut(s)	807
Bbv12I	GWGCWC	2 cut(s)	393, 787
BbvI	GCAGC	3 cut(s)	1367, 1857, 1860
BccI	CCATC	6 cut(s)	389, 922, 994, 1422, 1547, 1903
BceAI	ACGGC	1 cut(s)	73
BciT130I	CCWGG	7 cut(s)	87, 430, 1092, 1101, 1218, 1540, 1859
BcnI	CCSGG	1 cut(s)	1791
BcoDI	GTCTC	1 cut(s)	1089
BfaI	CTAG	1 cut(s)	1743
BfmI	CTRYAG	1 cut(s)	1353
BfoI	RGCGCY	1 cut(s)	1194
BfrI	CTTAAG	1 cut(s)	1039
BfuAI	ACCTGC	2 cut(s)	1256, 1537
BisI	GCNGC	3 cut(s)	1356, 1846, 1849
BlsI	GCNGC	3 cut(s)	1357, 1847, 1850
BmcAI	AGTACT	1 cut(s)	620
Bme1390I	CCNGG	8 cut(s)	87, 430, 1092, 1101, 1218, 1540, 1791, 1859
Bme18I	GGWCC	6 cut(s)	172, 722, 755, 851, 1316, 1892
BmeRI	GACNNNNNGTC	1 cut(s)	898
BmgT120I	GGNCC	7 cut(s)	172, 722, 755, 851, 1316, 1861, 1892
BmiI	GGNNCC	7 cut(s)	173, 299, 669, 757, 1086, 1192, 1215
BmrFI	CCNGG	8 cut(s)	87, 430, 1092, 1101, 1218, 1540, 1791, 1859
BmsI	GCATC	3 cut(s)	129, 904, 1347
BpiI	GAAGAC	1 cut(s)	807
BpmI	CTGGAG	2 cut(s)	1113, 1734
BpuEI	CTTGAG	1 cut(s)	803
BpuMI	CCSGG	1 cut(s)	1791
BsaAI	YACGTR	1 cut(s)	1184
BsaBI	GATNNNNATC	2 cut(s)	1380, 1464
BsaHI	GRCGYC	1 cut(s)	1191
BsaI	GGTCTC	1 cut(s)	1089
BsaJI	CCNNGG	4 cut(s)	833, 1090, 1099, 1858
BsaWI	WCCGGW	1 cut(s)	209
BsaXI	ACNNNNNCTCC	2 cut(s)	605, 635
Bsc4I	CCNNNNNNNGG	4 cut(s)	677, 1313, 1858, 1859
Bse1I	ACTGG	6 cut(s)	106, 299, 616, 1132, 1717, 1772
Bse21I	CCTNAGG	2 cut(s)	361, 1470
Bse3DI	GCAATG	2 cut(s)	709, 1796
Bse8I	GATNNNNATC	2 cut(s)	1380, 1464
BseBI	CCWGG	7 cut(s)	87, 430, 1092, 1101, 1218, 1540, 1859
BseDI	CCNNGG	4 cut(s)	833, 1090, 1099, 1858
BseGI	GGATG	4 cut(s)	610, 919, 1338, 1414
BseJI	GATNNNNATC	2 cut(s)	1380, 1464
BseLI	CCNNNNNNNGG	4 cut(s)	677, 1313, 1858, 1859
BseMI	GCAATG	2 cut(s)	709, 1796
BseMII	CTCAG	4 cut(s)	375, 460, 793, 1461
BseNI	ACTGG	6 cut(s)	106, 299, 616, 1132, 1717, 1772
BseRI	GAGGAG	3 cut(s)	613, 733, 1487
BseSI	GKGCMC	1 cut(s)	1796
BseXI	GCAGC	3 cut(s)	1367, 1857, 1860
BseYI	CCCAGC	1 cut(s)	698
BshFI	GGCC	4 cut(s)	406, 473, 952, 1863
BshNI	GGYRCC	2 cut(s)	1084, 1190
BsiHKAI	GWGCWC	2 cut(s)	393, 787
BsiSI	CCGG	2 cut(s)	210, 1790
BslFI	GGGAC	3 cut(s)	185, 302, 741
BslI	CCNNNNNNNGG	4 cut(s)	677, 1313, 1858, 1859
BsmAI	GTCTC	1 cut(s)	1089
BsmFI	GGGAC	3 cut(s)	185, 302, 741
BsnI	GGCC	4 cut(s)	406, 473, 952, 1863
Bso31I	GGTCTC	1 cut(s)	1089
Bsp1286I	GDGCHC	4 cut(s)	393, 787, 1764, 1796
Bsp143I	GATC	7 cut(s)	34, 667, 713, 1103, 1198, 1345, 1375
Bsp19I	CCATGG	1 cut(s)	833
BspACI	CCGC	4 cut(s)	320, 720, 1263, 1304
BspANI	GGCC	4 cut(s)	406, 473, 952, 1863
BspCNI	CTCAG	4 cut(s)	374, 459, 792, 1462
BspLI	GGNNCC	7 cut(s)	173, 299, 669, 757, 1086, 1192, 1215
BspMAI	CTGCAG	1 cut(s)	1357
BspMI	ACCTGC	2 cut(s)	1256, 1537
BspPI	GGATC	5 cut(s)	42, 662, 675, 1111, 1370
BspT107I	GGYRCC	2 cut(s)	1084, 1190
BspTI	CTTAAG	1 cut(s)	1039
BspTNI	GGTCTC	1 cut(s)	1089
BsrDI	GCAATG	2 cut(s)	709, 1796
BsrI	ACTGG	6 cut(s)	106, 299, 616, 1132, 1717, 1772
BssECI	CCNNGG	4 cut(s)	833, 1090, 1099, 1858
BssMI	GATC	7 cut(s)	34, 667, 713, 1103, 1198, 1345, 1375
BssNAI	GTATAC	1 cut(s)	1486
BssNI	GRCGYC	1 cut(s)	1191
BssT1I	CCWWGG	1 cut(s)	833
Bst1107I	GTATAC	1 cut(s)	1486
Bst2UI	CCWGG	7 cut(s)	87, 430, 1092, 1101, 1218, 1540, 1859
Bst4CI	ACNGT	5 cut(s)	247, 653, 1294, 1492, 1822
Bst6I	CTCTTC	1 cut(s)	510
BstACI	GRCGYC	1 cut(s)	1191
BstAFI	CTTAAG	1 cut(s)	1039
BstAPI	GCANNNNNTGC	1 cut(s)	1655
BstBAI	YACGTR	1 cut(s)	1184
BstDEI	CTNAG	5 cut(s)	361, 446, 779, 1007, 1470
BstDSI	CCRYGG	1 cut(s)	833
BstF5I	GGATG	4 cut(s)	610, 919, 1338, 1414
BstH2I	RGCGCY	1 cut(s)	1194
BstHHI	GCGC	1 cut(s)	1193
BstKTI	GATC	7 cut(s)	37, 670, 716, 1106, 1201, 1348, 1378
BstMAI	GTCTC	1 cut(s)	1089
BstMBI	GATC	7 cut(s)	34, 667, 713, 1103, 1198, 1345, 1375
BstMWI	GCNNNNNNNGC	5 cut(s)	319, 829, 1067, 1655, 1768
BstNI	CCWGG	7 cut(s)	87, 430, 1092, 1101, 1218, 1540, 1859
BstNSI	RCATGY	1 cut(s)	317
BstSCI	CCNGG	8 cut(s)	85, 428, 1090, 1099, 1216, 1538, 1789, 1857
BstSFI	CTRYAG	1 cut(s)	1353
BstSLI	GKGCMC	1 cut(s)	1796
BstV1I	GCAGC	3 cut(s)	1367, 1857, 1860
BstV2I	GAAGAC	1 cut(s)	807
BstX2I	RGATCY	1 cut(s)	667
BstXI	CCANNNNNNTGG	1 cut(s)	1326
BstYI	RGATCY	1 cut(s)	667
BstZ17I	GTATAC	1 cut(s)	1486
Bsu36I	CCTNAGG	2 cut(s)	361, 1470
BsuRI	GGCC	4 cut(s)	406, 473, 952, 1863
BtgI	CCRYGG	1 cut(s)	833
BtgZI	GCGATG	1 cut(s)	785
BtsCI	GGATG	4 cut(s)	610, 919, 1338, 1414
BtsIMutI	CAGTG	3 cut(s)	243, 787, 1827
BveI	ACCTGC	2 cut(s)	1256, 1537
CfoI	GCGC	1 cut(s)	1193
Cfr13I	GGNCC	7 cut(s)	172, 722, 755, 851, 1316, 1861, 1892
CsiI	ACCWGGT	1 cut(s)	85
Csp6I	GTAC	4 cut(s)	613, 619, 941, 1036
CspCI	CAANNNNNGTGG	2 cut(s)	748, 783
CviQI	GTAC	4 cut(s)	613, 619, 941, 1036
DdeI	CTNAG	5 cut(s)	361, 446, 779, 1007, 1470
DinI	GGCGCC	1 cut(s)	1192
DpnI	GATC	7 cut(s)	36, 669, 715, 1105, 1200, 1347, 1377
DpnII	GATC	7 cut(s)	34, 667, 713, 1103, 1198, 1345, 1375
DriI	GACNNNNNGTC	1 cut(s)	898
EaeI	YGGCCR	1 cut(s)	471
Eam1104I	CTCTTC	1 cut(s)	510
Eam1105I	GACNNNNNGTC	1 cut(s)	898
EarI	CTCTTC	1 cut(s)	510
EciI	GGCGGA	1 cut(s)	735
Eco130I	CCWWGG	1 cut(s)	833
Eco24I	GRGCYC	1 cut(s)	1764
Eco31I	GGTCTC	1 cut(s)	1089
Eco32I	GATATC	1 cut(s)	279
Eco47I	GGWCC	6 cut(s)	172, 722, 755, 851, 1316, 1892
Eco81I	CCTNAGG	2 cut(s)	361, 1470
EcoO109I	RGGNCCY	2 cut(s)	172, 1861
EcoRI	GAATTC	2 cut(s)	587, 1752
EcoRII	CCWGG	7 cut(s)	85, 428, 1090, 1099, 1216, 1538, 1857
EcoRV	GATATC	1 cut(s)	279
EcoT14I	CCWWGG	1 cut(s)	833
EcoT22I	ATGCAT	2 cut(s)	665, 1210
EcoT38I	GRGCYC	1 cut(s)	1764
EgeI	GGCGCC	1 cut(s)	1192
EheI	GGCGCC	1 cut(s)	1192
ErhI	CCWWGG	1 cut(s)	833
FalI	AAGNNNNNCTT	2 cut(s)	1033, 1065
FaqI	GGGAC	3 cut(s)	185, 302, 741
FauI	CCCGC	1 cut(s)	327
FblI	GTMKAC	1 cut(s)	1485
Fnu4HI	GCNGC	3 cut(s)	1356, 1846, 1849
FokI	GGATG	4 cut(s)	617, 926, 1325, 1401
FriOI	GRGCYC	1 cut(s)	1764
Fsp4HI	GCNGC	3 cut(s)	1356, 1846, 1849
FspBI	CTAG	1 cut(s)	1743
GlaI	GCGC	1 cut(s)	1192
GluI	GCNGC	3 cut(s)	1356, 1846, 1849
GsaI	CCCAGC	1 cut(s)	702
GsuI	CTGGAG	2 cut(s)	1113, 1734
HaeII	RGCGCY	1 cut(s)	1194
HaeIII	GGCC	4 cut(s)	406, 473, 952, 1863
HapII	CCGG	2 cut(s)	210, 1790
HhaI	GCGC	1 cut(s)	1193
Hin1I	GRCGYC	1 cut(s)	1191
Hin6I	GCGC	1 cut(s)	1191
HinP1I	GCGC	1 cut(s)	1191
HincII	GTYRAC	1 cut(s)	1411
HindII	GTYRAC	1 cut(s)	1411
HinfI	GANTC	5 cut(s)	152, 893, 1669, 1682, 1694
HpaI	GTTAAC	1 cut(s)	1411
HpaII	CCGG	2 cut(s)	210, 1790
HphI	GGTGA	3 cut(s)	943, 1298, 1689
Hpy166II	GTNNAC	5 cut(s)	243, 649, 1316, 1411, 1486
Hpy188I	TCNGA	6 cut(s)	144, 157, 203, 449, 1611, 1632
Hpy188III	TCNNGA	9 cut(s)	32, 509, 551, 795, 1028, 1138, 1373, 1418, 1469
Hpy8I	GTNNAC	5 cut(s)	243, 649, 1316, 1411, 1486
HpyAV	CCTTC	3 cut(s)	428, 1802, 1883
HpyCH4III	ACNGT	5 cut(s)	247, 653, 1294, 1492, 1822
HpyCH4IV	ACGT	3 cut(s)	750, 1183, 1533
HpyCH4V	TGCA	9 cut(s)	25, 643, 663, 917, 1122, 1208, 1355, 1649, 1658
HpyF10VI	GCNNNNNNNGC	5 cut(s)	319, 829, 1067, 1655, 1768
HpyF3I	CTNAG	5 cut(s)	361, 446, 779, 1007, 1470
HpySE526I	ACGT	3 cut(s)	750, 1183, 1533
Hsp92I	GRCGYC	1 cut(s)	1191
HspAI	GCGC	1 cut(s)	1191
KasI	GGCGCC	1 cut(s)	1190
KspAI	GTTAAC	1 cut(s)	1411
Kzo9I	GATC	7 cut(s)	34, 667, 713, 1103, 1198, 1345, 1375
Lsp1109I	GCAGC	3 cut(s)	1367, 1857, 1860
LweI	GCATC	3 cut(s)	129, 904, 1347
MabI	ACCWGGT	1 cut(s)	85
MaeI	CTAG	1 cut(s)	1743
MaeII	ACGT	3 cut(s)	750, 1183, 1533
MaeIII	GTNAC	5 cut(s)	70, 931, 1043, 1502, 1534
MalI	GATC	7 cut(s)	36, 669, 715, 1105, 1200, 1347, 1377
MboI	GATC	7 cut(s)	34, 667, 713, 1103, 1198, 1345, 1375
MboII	GAAGA	7 cut(s)	497, 554, 812, 850, 1469, 1516, 1893
MflI	RGATCY	1 cut(s)	667
MhlI	GDGCHC	4 cut(s)	393, 787, 1764, 1796
MlsI	TGGCCA	1 cut(s)	473
MluNI	TGGCCA	1 cut(s)	473
Mly113I	GGCGCC	1 cut(s)	1191
MlyI	GAGTC	2 cut(s)	887, 1688
MmeI	TCCRAC	2 cut(s)	181, 635
Mox20I	TGGCCA	1 cut(s)	473
Mph1103I	ATGCAT	2 cut(s)	665, 1210
MscI	TGGCCA	1 cut(s)	473
MseI	TTAA	7 cut(s)	228, 414, 729, 1040, 1254, 1395, 1410
Msp20I	TGGCCA	1 cut(s)	473
MspA1I	CMGCKG	1 cut(s)	1358
MspCI	CTTAAG	1 cut(s)	1039
MspI	CCGG	2 cut(s)	210, 1790
MspR9I	CCNGG	8 cut(s)	87, 430, 1092, 1101, 1218, 1540, 1791, 1859
MvaI	CCWGG	7 cut(s)	87, 430, 1092, 1101, 1218, 1540, 1859
MwoI	GCNNNNNNNGC	5 cut(s)	319, 829, 1067, 1655, 1768
NarI	GGCGCC	1 cut(s)	1191
NciI	CCSGG	1 cut(s)	1791
NcoI	CCATGG	1 cut(s)	833
NdeII	GATC	7 cut(s)	34, 667, 713, 1103, 1198, 1345, 1375
NlaIV	GGNNCC	7 cut(s)	173, 299, 669, 757, 1086, 1192, 1215
NmuCI	GTSAC	3 cut(s)	931, 1043, 1502
NsiI	ATGCAT	2 cut(s)	665, 1210
NspI	RCATGY	1 cut(s)	317
PfeI	GAWTC	3 cut(s)	152, 1669, 1682
PflFI	GACNNNGTC	1 cut(s)	1601
PflMI	CCANNNNNTGG	1 cut(s)	1313
PkrI	GCNGC	3 cut(s)	1357, 1847, 1850
PleI	GAGTC	2 cut(s)	887, 1688
PluTI	GGCGCC	1 cut(s)	1194
PpsI	GAGTC	2 cut(s)	887, 1688
Ppu21I	YACGTR	1 cut(s)	1184
PpuMI	RGGWCCY	1 cut(s)	172
PsiI	TTATAA	1 cut(s)	98
Psp5II	RGGWCCY	1 cut(s)	172
Psp6I	CCWGG	7 cut(s)	85, 428, 1090, 1099, 1216, 1538, 1857
PspFI	CCCAGC	1 cut(s)	698
PspGI	CCWGG	7 cut(s)	85, 428, 1090, 1099, 1216, 1538, 1857
PspN4I	GGNNCC	7 cut(s)	173, 299, 669, 757, 1086, 1192, 1215
PspPI	GGNCC	7 cut(s)	172, 722, 755, 851, 1316, 1861, 1892
PspPPI	RGGWCCY	1 cut(s)	172
PstI	CTGCAG	1 cut(s)	1357
PsuI	RGATCY	1 cut(s)	667
PsyI	GACNNNGTC	1 cut(s)	1601
PvuII	CAGCTG	1 cut(s)	1358
RsaI	GTAC	4 cut(s)	614, 620, 942, 1037
RsaNI	GTAC	4 cut(s)	613, 619, 941, 1036
SaqAI	TTAA	7 cut(s)	228, 414, 729, 1040, 1254, 1395, 1410
SatI	GCNGC	3 cut(s)	1356, 1846, 1849
Sau3AI	GATC	7 cut(s)	34, 667, 713, 1103, 1198, 1345, 1375
Sau96I	GGNCC	7 cut(s)	172, 722, 755, 851, 1316, 1861, 1892
ScaI	AGTACT	1 cut(s)	620
SchI	GAGTC	2 cut(s)	887, 1688
ScrFI	CCNGG	8 cut(s)	87, 430, 1092, 1101, 1218, 1540, 1791, 1859
SduI	GDGCHC	4 cut(s)	393, 787, 1764, 1796
SexAI	ACCWGGT	1 cut(s)	85
SfaNI	GCATC	3 cut(s)	129, 904, 1347
SfcI	CTRYAG	1 cut(s)	1353
SfoI	GGCGCC	1 cut(s)	1192
SinI	GGWCC	6 cut(s)	172, 722, 755, 851, 1316, 1892
SmlI	CTYRAG	2 cut(s)	818, 1039
SmoI	CTYRAG	2 cut(s)	818, 1039
SsiI	CCGC	4 cut(s)	320, 720, 1263, 1304
SspDI	GGCGCC	1 cut(s)	1190
SspI	AATATT	1 cut(s)	1276
SspMI	CTAG	1 cut(s)	1743
StyD4I	CCNGG	8 cut(s)	85, 428, 1090, 1099, 1216, 1538, 1789, 1857
StyI	CCWWGG	1 cut(s)	833
TaaI	ACNGT	5 cut(s)	247, 653, 1294, 1492, 1822
TaiI	ACGT	3 cut(s)	753, 1186, 1536
TaqI	TCGA	2 cut(s)	123, 712
TaqII	GACCGA	1 cut(s)	531
TatI	WGTACW	2 cut(s)	618, 940
TfiI	GAWTC	3 cut(s)	152, 1669, 1682
Tru1I	TTAA	7 cut(s)	228, 414, 729, 1040, 1254, 1395, 1410
Tru9I	TTAA	7 cut(s)	228, 414, 729, 1040, 1254, 1395, 1410
TscAI	CASTG	3 cut(s)	250, 787, 1827
TseFI	GTSAC	3 cut(s)	931, 1043, 1502
TseI	GCWGC	3 cut(s)	1355, 1845, 1848
Tsp45I	GTSAC	3 cut(s)	931, 1043, 1502
TspDTI	ATGAA	5 cut(s)	331, 1008, 1260, 1470, 1745
TspGWI	ACGGA	1 cut(s)	1871
TspRI	CASTG	3 cut(s)	250, 787, 1827
Tth111I	GACNNNGTC	1 cut(s)	1601
Van91I	CCANNNNNTGG	1 cut(s)	1313
Vha464I	CTTAAG	1 cut(s)	1039
VpaK11BI	GGWCC	6 cut(s)	172, 722, 755, 851, 1316, 1892
XapI	RAATTY	4 cut(s)	138, 587, 1361, 1752
XceI	RCATGY	1 cut(s)	317
XcmI	CCANNNNNNNNNTGG	1 cut(s)	831
XmiI	GTMKAC	1 cut(s)	1485
XspI	CTAG	1 cut(s)	1743
ZrmI	AGTACT	1 cut(s)	620
Zsp2I	ATGCAT	2 cut(s)	665, 1210

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.