Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0002285

Physical Location & Seq

Genomic Coordinates Reverse (-)

12695750 .. 12703529

Gene Structure 7780 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000001239

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1926 bp

ATGTCGTCTCTGGGGGTGCAATTGCATATTCAGGACGATCATGTGATTATGGATAACGGCACACTCCAAGTTACATTATCAAATCCAGGTGGAATTGTTACTGGGATCCATTATAACGGCATTGACAATTTACTTGAAGTTCTCAATGAAGAGGATAATAGAGGGTACTGGGACCTTGTTTGGAGTGAAACGGGAAGTATCGGAACAACCGGAACCTATGATCGAATTATAGGAACAAAATTCACGGTTATAGTGAAAAGTGAAGAACAAGTAGAGATATCATTCACTAGAGAGTGGAATCACGAGGACAAGAATGTCCCGCTAAATATAGACAAAAGGTTTGTAATGCTTAGTAATTCGTCAGGCTTCTACTCGTACGCCATCTACGAGCACTTGAAAGAATGGCCTCCTTTCAATCTTCCCCAAACCAGGATTGTGTTCAAGCTCAGTAAAGAGAAGTTTCAGTACATGGCGATAGCTGATGACAGGCAAAGAAACATGCCCCTTCCTGACGACAGATTACCCGAAAGATGCCAAATCCTAAATTCAGATTTCCCAGAAGCAGTCGTTCTCGTCAATCCTATAGAGGCACAATATACGGGAGAGGTGGATGACAAGTACCAATACTCATGCGAGAACCAAAATTTGCGGGTTCACGGTTGGACATGCATGGACCCTCATGTAGGGTTTTGGCAGATAACGCCTAGTGATGAGTTCCGATCTGGCGGACCTCTTAAACAGAACCTCACATCCCACGTCGGTCCTATTTGTCTTGCAATGTTTCTGAGTGCTCACTATTCAGGAGAGGATCTTGTGCTGAAAATTAAACCAGATGAGCCATGGAAGAAAGTTTTCGGCCCTGTTTTTATCTATCTTAATTCTGCATCTGATGATGCAAAAGATTCATCACCACTCTGGGAAGATGCAAAGAAACAGATGATGACAGAAGTAAAACGCTGGCCTTATGAGTTTCCAGCTTCCACTGATTTTCCAACGTCAAAGCAACGGGGTAATGTTAGTGGTAGAATACTTGTTCGAGATAGCTTTGTTAGCGACGATCACATACTCGGCCATGGTGCTTATGTTGGATTGGCACCACCTGGAGATGTTGGATCATGGCAAAGAGATTGCAAGGGTTACCAGTTCTGGACTAGGGCAGATGAGAATGGCTATTACTCTATCAAAAATATACGCGAGGGGAACTATAATCTCTACGCGTGGGTTCCTGGGTTTATTGGAGATTACCGCTATGGTTTAACCATTAACATAACTCCAGGTTGTGATATTGACCTTGGTAGTCTTGTATATGAGCCTCCGAGGGATGGACCAACATTGTGGGAAATTGGTTACCCGGATCGCTCTGCTGTTGGATTCTATGTTCCCGATCCTAATCCAAAGTATATCAATAAACTTTATGTAAACCATCCTGACAGGTTTAGGCAGTGGGGGTTATGGGAAAGATATGCCGAGTTATATCCTAATGAGGATTTAGTTTACACTATTGGAACTAGTGACTATACTAAAGATTGGTTCTTTGCTCAAGTTACCAGGAAGAACGATGATGGCACATATCAAGGGACTACATGGAAAATCATATTTCAGCTTGACAATGTCAGTCAGACCAAAATCTACAAACTTCGATTGGCCCTCGCTACTGCAAATATTGCAGAATTACAGATTCGCATAAATGATTCCAAAGCAGACCCTCCTCTGTTTACGACCGGCGTGATCGGACACGACAACACAATTTGCAGACATGGAATTCATGGTCTCTACCGGCTGTATACAATAGACGTACCGGGCACATTGCTTGTGAAAGGTGACAATACAGTGTTTCTAACGCAAGCAGTGAGCACCAGCCCTTTCGTGGGGATCATGTATGACTATATTCGTTTAGAAGCCCCATCATCTTCAACTTCGGCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0003674 GO:0003824 GO:0005975 GO:0005976 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010393 GO:0016052 GO:0016829 GO:0016835 GO:0016837 GO:0017144 GO:0042737 GO:0043170 GO:0044237 GO:0044238 GO:0044248 GO:0045488 GO:0045490 GO:0071704 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CBM-like Rhamnogal_lyase fn3_3

Protein Analysis

642

Amino Acids

73.08

Weight (kDa)

5.15

Isoelectric Point (pI)

33.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rhamnogal_lyase	PF06045	5 - 203	3.5e-86	Rhamnogalacturonate lyase family
fn3_3	PF14686	358 - 430	1.2e-26	Polysaccharide lyase family 4, domain II
CBM-like	PF14683	444 - 632	1e-50	Polysaccharide lyase family 4, domain III

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002285)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24430 AT4G24430
fragaria_vesca	FvH4_5g34131 FvH4_5g34131 FvH4_5g34131 FvH4_5g34131 FvH4_5g34150
malus_domestica	MD08G1204400.v1.1 MD08G1205000.v1.1
prunus_persica	Prupe.1G536600_v2.0.a1 Prupe.1G536600_v2.0.a1 Prupe.1G536600_v2.0.a1 Prupe.1G536700_v2.0.a1 Prupe.1G536700_v2.0.a1
pyrus_communis	pycom08g17670 pycom08g17720
rosa_chinensis	RchiOBHm_Chr7g0233711 RchiOBHm_Chr7g0233721 RchiOBHm_Chr7g0233731 RchiOBHm_Chr7g0233741
rosa_laevigata	RLG00000001237 RLG00000001239 RLG00000001240
rosa_multiflora	Rmu_sc0000740.1_g000047 Rmu_sc0000740.1_g000058 Rmu_sc0010145.1_g000001 Rmu_sc0011583.1_g000004
rosa_roxburghii	Rroxscaffold_3G00227030 Rroxscaffold_3G00227050 Rroxscaffold_3G00227070
rosa_rugosa	Rorug07G0282300 Rorug07G0282300
rosa_samantha	Rh7AG438600 Rh7AG438700 Rh7BG411300 Rh7CG458200 Rh7CG458300 Rh7CG458400 Rh7DG428200
rosa_wichuraiana	Rw7G036170 Rw7G036180 Rw7G036230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	114
AasI	GACNNNNNNGTC	1 cut(s)	314
AccB1I	GGYRCC	1 cut(s)	1093
AccI	GTMKAC	1 cut(s)	1784
AccII	CGCG	2 cut(s)	1194, 1217
AciI	CCGC	4 cut(s)	320, 649, 726, 1246
AclWI	GGATC	7 cut(s)	100, 113, 816, 1120, 1362, 1379, 1880
AcoI	YGGCCR	1 cut(s)	1069
AcsI	RAATTY	4 cut(s)	239, 544, 643, 1761
AfaI	GTAC	5 cut(s)	167, 377, 467, 620, 1797
AfiI	CCNNNNNNNGG	5 cut(s)	429, 683, 1322, 1867, 1868
AflIII	ACRYGT	1 cut(s)	1215
AgsI	TTSAA	5 cut(s)	137, 397, 415, 442, 1914
AhlI	ACTAGT	1 cut(s)	1508
AjiI	CACGTC	1 cut(s)	757
AjnI	CCWGG	6 cut(s)	85, 428, 1099, 1225, 1273, 1547
AloI	GAACNNNNNNTCC	4 cut(s)	734, 766, 1362, 1394
AluBI	AGCT	5 cut(s)	445, 479, 977, 1044, 1603
AluI	AGCT	5 cut(s)	445, 479, 977, 1044, 1603
Alw21I	GWGCWC	3 cut(s)	393, 793, 1856
Alw26I	GTCTC	2 cut(s)	12, 1775
AlwI	GGATC	7 cut(s)	100, 113, 816, 1120, 1362, 1379, 1880
AoxI	GGCC	6 cut(s)	404, 856, 959, 1069, 1644, 1920
ApoI	RAATTY	4 cut(s)	239, 544, 643, 1761
ArsI	GACNNNNNNTTYG	2 cut(s)	323, 355
Asp700I	GAANNNNTTC	1 cut(s)	851
AspS9I	GGNCC	7 cut(s)	172, 673, 728, 761, 857, 1325, 1645
AsuC2I	CCSGG	2 cut(s)	1352, 1800
AsuHPI	GGTGA	2 cut(s)	900, 1832
AvaII	GGWCC	5 cut(s)	172, 673, 728, 761, 1325
BaeGI	GKGCMC	1 cut(s)	1805
BamHI	GGATCC	1 cut(s)	105
BanI	GGYRCC	1 cut(s)	1093
BarI	GAAGNNNNNNTAC	2 cut(s)	449, 481
BauI	CACGAG	1 cut(s)	302
Bbv12I	GWGCWC	3 cut(s)	393, 793, 1856
BccI	CCATC	5 cut(s)	389, 1316, 1431, 1556, 1912
BceAI	ACGGC	2 cut(s)	73, 133
BciT130I	CCWGG	6 cut(s)	87, 430, 1101, 1227, 1275, 1549
BcnI	CCSGG	2 cut(s)	1352, 1800
BcoDI	GTCTC	2 cut(s)	12, 1775
BcuI	ACTAGT	1 cut(s)	1508
BfaI	CTAG	4 cut(s)	288, 705, 1152, 1509
BfmI	CTRYAG	1 cut(s)	582
Bme1390I	CCNGG	8 cut(s)	87, 430, 1101, 1227, 1275, 1352, 1549, 1800
Bme18I	GGWCC	5 cut(s)	172, 673, 728, 761, 1325
BmgBI	CACGTC	1 cut(s)	757
BmgT120I	GGNCC	7 cut(s)	172, 673, 728, 761, 857, 1325, 1645
BmiI	GGNNCC	6 cut(s)	107, 173, 214, 675, 1095, 1224
BmrFI	CCNGG	8 cut(s)	87, 430, 1101, 1227, 1275, 1352, 1549, 1800
BmrI	ACTGGG	2 cut(s)	111, 178
BmsI	GCATC	4 cut(s)	521, 883, 893, 913
BmuI	ACTGGG	2 cut(s)	111, 178
BpmI	CTGGAG	2 cut(s)	1122, 1257
BpuEI	CTTGAG	1 cut(s)	1524
BpuMI	CCSGG	2 cut(s)	1352, 1800
BsaBI	GATNNNNATC	1 cut(s)	1389
BsaI	GGTCTC	1 cut(s)	1775
BsaJI	CCNNGG	5 cut(s)	839, 1072, 1226, 1291, 1316
BsaWI	WCCGGW	1 cut(s)	209
Bsc4I	CCNNNNNNNGG	5 cut(s)	429, 683, 1322, 1867, 1868
Bse118I	RCCGGY	2 cut(s)	1721, 1776
Bse1I	ACTGG	3 cut(s)	106, 173, 1141
Bse3DI	GCAATG	2 cut(s)	783, 1805
Bse8I	GATNNNNATC	1 cut(s)	1389
BseBI	CCWGG	6 cut(s)	87, 430, 1101, 1227, 1275, 1549
BseDI	CCNNGG	5 cut(s)	839, 1072, 1226, 1291, 1316
BseGI	GGATG	4 cut(s)	616, 749, 1327, 1423
BseJI	GATNNNNATC	1 cut(s)	1389
BseLI	CCNNNNNNNGG	5 cut(s)	429, 683, 1322, 1867, 1868
BseMI	GCAATG	2 cut(s)	783, 1805
BseMII	CTCAG	2 cut(s)	460, 776
BseNI	ACTGG	3 cut(s)	106, 173, 1141
BseRI	GAGGAG	1 cut(s)	1698
BseSI	GKGCMC	1 cut(s)	1805
Bsh1236I	CGCG	2 cut(s)	1194, 1217
Bsh1285I	CGRYCG	1 cut(s)	1722
BshFI	GGCC	6 cut(s)	406, 858, 961, 1071, 1646, 1922
BshNI	GGYRCC	1 cut(s)	1093
BsiEI	CGRYCG	1 cut(s)	1722
BsiHKAI	GWGCWC	3 cut(s)	393, 793, 1856
BsiSI	CCGG	5 cut(s)	210, 1352, 1722, 1777, 1799
BsiWI	CGTACG	1 cut(s)	375
BslFI	GGGAC	3 cut(s)	185, 302, 1591
BslI	CCNNNNNNNGG	5 cut(s)	429, 683, 1322, 1867, 1868
BsmAI	GTCTC	2 cut(s)	12, 1775
BsmBI	CGTCTC	1 cut(s)	12
BsmFI	GGGAC	3 cut(s)	185, 302, 1591
BsnI	GGCC	6 cut(s)	406, 858, 961, 1071, 1646, 1922
Bso31I	GGTCTC	1 cut(s)	1775
Bsp1286I	GDGCHC	4 cut(s)	393, 793, 1805, 1856
Bsp19I	CCATGG	2 cut(s)	839, 1072
BspACI	CCGC	4 cut(s)	320, 649, 726, 1246
BspANI	GGCC	6 cut(s)	406, 858, 961, 1071, 1646, 1922
BspCNI	CTCAG	2 cut(s)	459, 777
BspFNI	CGCG	2 cut(s)	1194, 1217
BspLI	GGNNCC	6 cut(s)	107, 173, 214, 675, 1095, 1224
BspPI	GGATC	7 cut(s)	100, 113, 816, 1120, 1362, 1379, 1880
BspT107I	GGYRCC	1 cut(s)	1093
BspTNI	GGTCTC	1 cut(s)	1775
BsrDI	GCAATG	2 cut(s)	783, 1805
BsrFI	RCCGGY	2 cut(s)	1721, 1776
BsrI	ACTGG	3 cut(s)	106, 173, 1141
BssAI	RCCGGY	2 cut(s)	1721, 1776
BssECI	CCNNGG	5 cut(s)	839, 1072, 1226, 1291, 1316
BssNAI	GTATAC	1 cut(s)	1785
BssSI	CACGAG	1 cut(s)	302
BssT1I	CCWWGG	3 cut(s)	839, 1072, 1291
Bst1107I	GTATAC	1 cut(s)	1785
Bst2BI	CACGAG	1 cut(s)	302
Bst2UI	CCWGG	6 cut(s)	87, 430, 1101, 1227, 1275, 1549
Bst4CI	ACNGT	3 cut(s)	247, 659, 1831
Bst6I	CTCTTC	1 cut(s)	144
BstAPI	GCANNNNNTGC	1 cut(s)	1664
BstC8I	GCNNGC	2 cut(s)	959, 1845
BstDEI	CTNAG	3 cut(s)	350, 446, 785
BstDSI	CCRYGG	2 cut(s)	839, 1072
BstEII	GGTNACC	2 cut(s)	1136, 1346
BstENI	CCTNNNNNAGG	1 cut(s)	681
BstF5I	GGATG	4 cut(s)	616, 749, 1327, 1423
BstFNI	CGCG	2 cut(s)	1194, 1217
BstMAI	GTCTC	2 cut(s)	12, 1775
BstMCI	CGRYCG	1 cut(s)	1722
BstMWI	GCNNNNNNNGC	3 cut(s)	700, 1050, 1664
BstNI	CCWGG	6 cut(s)	87, 430, 1101, 1227, 1275, 1549
BstNSI	RCATGY	2 cut(s)	502, 669
BstPI	GGTNACC	2 cut(s)	1136, 1346
BstSCI	CCNGG	8 cut(s)	85, 428, 1099, 1225, 1273, 1350, 1547, 1798
BstSFI	CTRYAG	1 cut(s)	582
BstSLI	GKGCMC	1 cut(s)	1805
BstUI	CGCG	2 cut(s)	1194, 1217
BstX2I	RGATCY	2 cut(s)	105, 808
BstXI	CCANNNNNNTGG	1 cut(s)	1335
BstYI	RGATCY	2 cut(s)	105, 808
BstZ17I	GTATAC	1 cut(s)	1785
BsuRI	GGCC	6 cut(s)	406, 858, 961, 1071, 1646, 1922
BtgI	CCRYGG	2 cut(s)	839, 1072
BtrI	CACGTC	1 cut(s)	757
BtsCI	GGATG	4 cut(s)	616, 749, 1327, 1423
BtsI	GCAGTG	2 cut(s)	1448, 1854
BtsIMutI	CAGTG	4 cut(s)	981, 1448, 1836, 1854
Cac8I	GCNNGC	2 cut(s)	959, 1845
Cfr10I	RCCGGY	2 cut(s)	1721, 1776
Cfr13I	GGNCC	7 cut(s)	172, 673, 728, 761, 857, 1325, 1645
Csp6I	GTAC	5 cut(s)	166, 376, 466, 619, 1796
CviQI	GTAC	5 cut(s)	166, 376, 466, 619, 1796
DdeI	CTNAG	3 cut(s)	350, 446, 785
DrdI	GACNNNNNNGTC	1 cut(s)	314
DseDI	GACNNNNNNGTC	1 cut(s)	314
EaeI	YGGCCR	1 cut(s)	1069
Eam1104I	CTCTTC	1 cut(s)	144
EarI	CTCTTC	1 cut(s)	144
EciI	GGCGGA	1 cut(s)	741
Eco130I	CCWWGG	3 cut(s)	839, 1072, 1291
Eco31I	GGTCTC	1 cut(s)	1775
Eco32I	GATATC	1 cut(s)	279
Eco47I	GGWCC	5 cut(s)	172, 673, 728, 761, 1325
Eco91I	GGTNACC	2 cut(s)	1136, 1346
EcoNI	CCTNNNNNAGG	1 cut(s)	681
EcoO109I	RGGNCCY	1 cut(s)	172
EcoO65I	GGTNACC	2 cut(s)	1136, 1346
EcoRI	GAATTC	1 cut(s)	1761
EcoRII	CCWGG	6 cut(s)	85, 428, 1099, 1225, 1273, 1547
EcoRV	GATATC	1 cut(s)	279
EcoT14I	CCWWGG	3 cut(s)	839, 1072, 1291
EcoT22I	ATGCAT	1 cut(s)	671
ErhI	CCWWGG	3 cut(s)	839, 1072, 1291
Esp3I	CGTCTC	1 cut(s)	12
FaqI	GGGAC	3 cut(s)	185, 302, 1591
FauI	CCCGC	2 cut(s)	327, 642
FblI	GTMKAC	1 cut(s)	1784
FokI	GGATG	4 cut(s)	623, 736, 1334, 1410
FspBI	CTAG	4 cut(s)	288, 705, 1152, 1509
GsuI	CTGGAG	2 cut(s)	1122, 1257
HaeIII	GGCC	6 cut(s)	406, 858, 961, 1071, 1646, 1922
HapII	CCGG	5 cut(s)	210, 1352, 1722, 1777, 1799
HinfI	GANTC	5 cut(s)	298, 902, 1371, 1678, 1691
HpaII	CCGG	5 cut(s)	210, 1352, 1722, 1777, 1799
HphI	GGTGA	2 cut(s)	900, 1832
Hpy166II	GTNNAC	5 cut(s)	655, 1420, 1495, 1716, 1785
Hpy188I	TCNGA	8 cut(s)	203, 550, 719, 786, 889, 1317, 1620, 1733
Hpy188III	TCNNGA	8 cut(s)	32, 302, 509, 801, 1037, 1147, 1382, 1427
Hpy8I	GTNNAC	5 cut(s)	655, 1420, 1495, 1716, 1785
Hpy99I	CGWCG	2 cut(s)	761, 1058
HpyAV	CCTTC	1 cut(s)	515
HpyCH4III	ACNGT	3 cut(s)	247, 659, 1831
HpyCH4IV	ACGT	3 cut(s)	756, 995, 1794
HpyF10VI	GCNNNNNNNGC	3 cut(s)	700, 1050, 1664
HpyF3I	CTNAG	3 cut(s)	350, 446, 785
HpySE526I	ACGT	3 cut(s)	756, 995, 1794
LweI	GCATC	4 cut(s)	521, 883, 893, 913
MaeI	CTAG	4 cut(s)	288, 705, 1152, 1509
MaeII	ACGT	3 cut(s)	756, 995, 1794
MaeIII	GTNAC	7 cut(s)	70, 97, 1136, 1346, 1511, 1543, 1820
MboII	GAAGA	7 cut(s)	161, 275, 410, 856, 932, 1564, 1902
MfeI	CAATTG	1 cut(s)	20
MflI	RGATCY	2 cut(s)	105, 808
MhlI	GDGCHC	4 cut(s)	393, 793, 1805, 1856
MluI	ACGCGT	1 cut(s)	1215
MmeI	TCCRAC	5 cut(s)	641, 1016, 1066, 1090, 1348
Mph1103I	ATGCAT	1 cut(s)	671
MroXI	GAANNNNTTC	1 cut(s)	851
MseI	TTAA	5 cut(s)	735, 825, 876, 1256, 1263
MspI	CCGG	5 cut(s)	210, 1352, 1722, 1777, 1799
MspR9I	CCNGG	8 cut(s)	87, 430, 1101, 1227, 1275, 1352, 1549, 1800
MunI	CAATTG	1 cut(s)	20
MvaI	CCWGG	6 cut(s)	87, 430, 1101, 1227, 1275, 1549
MvnI	CGCG	2 cut(s)	1194, 1217
MwoI	GCNNNNNNNGC	3 cut(s)	700, 1050, 1664
NciI	CCSGG	2 cut(s)	1352, 1800
NcoI	CCATGG	2 cut(s)	839, 1072
NlaIV	GGNNCC	6 cut(s)	107, 173, 214, 675, 1095, 1224
NmeAIII	GCCGAG	2 cut(s)	1047, 1492
NmuCI	GTSAC	2 cut(s)	1511, 1820
NsiI	ATGCAT	1 cut(s)	671
NspI	RCATGY	2 cut(s)	502, 669
PcsI	WCGNNNNNNNCGW	1 cut(s)	384
PdmI	GAANNNNTTC	1 cut(s)	851
PfeI	GAWTC	5 cut(s)	298, 902, 1371, 1678, 1691
Pfl23II	CGTACG	1 cut(s)	375
PflFI	GACNNNGTC	1 cut(s)	1610
PpuMI	RGGWCCY	1 cut(s)	172
PsiI	TTATAA	1 cut(s)	114
Psp5II	RGGWCCY	1 cut(s)	172
Psp6I	CCWGG	6 cut(s)	85, 428, 1099, 1225, 1273, 1547
PspEI	GGTNACC	2 cut(s)	1136, 1346
PspGI	CCWGG	6 cut(s)	85, 428, 1099, 1225, 1273, 1547
PspLI	CGTACG	1 cut(s)	375
PspN4I	GGNNCC	6 cut(s)	107, 173, 214, 675, 1095, 1224
PspPI	GGNCC	7 cut(s)	172, 673, 728, 761, 857, 1325, 1645
PspPPI	RGGWCCY	1 cut(s)	172
PsuI	RGATCY	2 cut(s)	105, 808
PsyI	GACNNNGTC	1 cut(s)	1610
RsaI	GTAC	5 cut(s)	167, 377, 467, 620, 1797
RsaNI	GTAC	5 cut(s)	166, 376, 466, 619, 1796
SaqAI	TTAA	5 cut(s)	735, 825, 876, 1256, 1263
Sau96I	GGNCC	7 cut(s)	172, 673, 728, 761, 857, 1325, 1645
ScrFI	CCNGG	8 cut(s)	87, 430, 1101, 1227, 1275, 1352, 1549, 1800
SduI	GDGCHC	4 cut(s)	393, 793, 1805, 1856
SfaNI	GCATC	4 cut(s)	521, 883, 893, 913
SfcI	CTRYAG	1 cut(s)	582
SinI	GGWCC	5 cut(s)	172, 673, 728, 761, 1325
SmlI	CTYRAG	1 cut(s)	1539
SmoI	CTYRAG	1 cut(s)	1539
SpeI	ACTAGT	1 cut(s)	1508
SsiI	CCGC	4 cut(s)	320, 649, 726, 1246
SspI	AATATT	1 cut(s)	1663
SspMI	CTAG	4 cut(s)	288, 705, 1152, 1509
StyD4I	CCNGG	8 cut(s)	85, 428, 1099, 1225, 1273, 1350, 1547, 1798
StyI	CCWWGG	3 cut(s)	839, 1072, 1291
TaaI	ACNGT	3 cut(s)	247, 659, 1831
TaiI	ACGT	3 cut(s)	759, 998, 1797
TaqI	TCGA	3 cut(s)	223, 1036, 1639
TaqII	GACCGA	1 cut(s)	749
TatI	WGTACW	1 cut(s)	465
TfiI	GAWTC	5 cut(s)	298, 902, 1371, 1678, 1691
Tru1I	TTAA	5 cut(s)	735, 825, 876, 1256, 1263
Tru9I	TTAA	5 cut(s)	735, 825, 876, 1256, 1263
TscAI	CASTG	4 cut(s)	988, 1448, 1836, 1854
TseFI	GTSAC	2 cut(s)	1511, 1820
Tsp45I	GTSAC	2 cut(s)	1511, 1820
TspDTI	ATGAA	3 cut(s)	162, 894, 1754
TspRI	CASTG	4 cut(s)	988, 1448, 1836, 1854
Tth111I	GACNNNGTC	1 cut(s)	1610
VpaK11BI	GGWCC	5 cut(s)	172, 673, 728, 761, 1325
XagI	CCTNNNNNAGG	1 cut(s)	681
XapI	RAATTY	4 cut(s)	239, 544, 643, 1761
XceI	RCATGY	2 cut(s)	502, 669
XcmI	CCANNNNNNNNNTGG	2 cut(s)	837, 1864
XmiI	GTMKAC	1 cut(s)	1784
XmnI	GAANNNNTTC	1 cut(s)	851
XspI	CTAG	4 cut(s)	288, 705, 1152, 1509
Zsp2I	ATGCAT	1 cut(s)	671

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.