Transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G26640 AT4G26640 AT4G26640 AT4G26640 AT4G26640 AT4G26640 AT4G26640 |
| fragaria_vesca | FvH4_3g24010 FvH4_3g24010 |
| malus_domestica | MD03G1188900.v1.1 MD11G1205000.v1.1 |
| prunus_persica | Prupe.4G232600_v2.0.a1 Prupe.4G232600_v2.0.a1 Prupe.4G232600_v2.0.a1 |
| pyrus_communis | pycom03g14170 pycom11g17770 |
| rosa_chinensis | RchiOBHm_Chr5g0042581 RchiOBHm_Chr5g0042601 |
| rosa_laevigata | RLG00000034142 |
| rosa_multiflora | Rmu_sc0004704.1_g000005 Rmu_sc0004704.1_g000010 Rmu_sc0012301.1_g000004 Rmu_sc0012301.1_g000009 |
| rosa_roxburghii | Rroxscaffold_1G00038060 |
| rosa_rugosa | Rorug05G0202900 Rorug05G0203000 Rorug05G0203100 |
| rosa_samantha | Rh5AG287900 Rh5AG288300 Rh5BG292300 Rh5CG324700 Rh5DG302100 |
| rosa_wichuraiana | Rw5G026730 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 426, 486 |
| Acc36I | ACCTGC | 1 cut(s) | 260 |
| AccI | GTMKAC | 1 cut(s) | 690 |
| AciI | CCGC | 3 cut(s) | 770, 1335, 1424 |
| AclWI | GGATC | 6 cut(s) | 228, 241, 352, 688, 806, 1046 |
| AcoI | YGGCCR | 3 cut(s) | 293, 664, 1351 |
| AcsI | RAATTY | 2 cut(s) | 137, 467 |
| AcuI | CTGAAG | 1 cut(s) | 750 |
| AcvI | CACGTG | 1 cut(s) | 1033 |
| AcyI | GRCGYC | 1 cut(s) | 687 |
| AfaI | GTAC | 6 cut(s) | 210, 493, 571, 735, 1349, 1443 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 32, 596, 1433, 1434 |
| AflIII | ACRYGT | 1 cut(s) | 1030 |
| AgsI | TTSAA | 7 cut(s) | 46, 218, 527, 660, 899, 1110, 1402 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1393 |
| AhlI | ACTAGT | 1 cut(s) | 862 |
| AjnI | CCWGG | 3 cut(s) | 222, 595, 983 |
| AluBI | AGCT | 9 cut(s) | 75, 181, 286, 327, 480, 990, 1007, 1061, 1326 |
| AluI | AGCT | 9 cut(s) | 75, 181, 286, 327, 480, 990, 1007, 1061, 1326 |
| Alw21I | GWGCWC | 2 cut(s) | 63, 329 |
| Alw26I | GTCTC | 1 cut(s) | 1367 |
| Alw44I | GTGCAC | 1 cut(s) | 59 |
| AlwI | GGATC | 6 cut(s) | 228, 241, 352, 688, 806, 1046 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 752 |
| Ama87I | CYCGRG | 1 cut(s) | 885 |
| AoxI | GGCC | 5 cut(s) | 220, 226, 293, 664, 1351 |
| ApaLI | GTGCAC | 1 cut(s) | 59 |
| ApeKI | GCWGC | 4 cut(s) | 266, 623, 773, 1119 |
| ApoI | RAATTY | 2 cut(s) | 137, 467 |
| AspLEI | GCGC | 1 cut(s) | 945 |
| AspS9I | GGNCC | 3 cut(s) | 226, 1205, 1451 |
| AsuC2I | CCSGG | 2 cut(s) | 475, 878 |
| AsuHPI | GGTGA | 4 cut(s) | 237, 541, 1256, 1397 |
| AsuNHI | GCTAGC | 2 cut(s) | 71, 1322 |
| AvaI | CYCGRG | 1 cut(s) | 885 |
| AvaII | GGWCC | 2 cut(s) | 1205, 1451 |
| BaeGI | GKGCMC | 1 cut(s) | 63 |
| BamHI | GGATCC | 1 cut(s) | 233 |
| BanII | GRGCYC | 1 cut(s) | 329 |
| BbrPI | CACGTG | 1 cut(s) | 1033 |
| Bbv12I | GWGCWC | 2 cut(s) | 63, 329 |
| BbvI | GCAGC | 4 cut(s) | 253, 610, 785, 1131 |
| BceAI | ACGGC | 1 cut(s) | 1366 |
| BciT130I | CCWGG | 3 cut(s) | 224, 597, 985 |
| BciVI | GTATCC | 1 cut(s) | 660 |
| BclI | TGATCA | 1 cut(s) | 349 |
| BcnI | CCSGG | 2 cut(s) | 475, 878 |
| BcoDI | GTCTC | 1 cut(s) | 1367 |
| BcuI | ACTAGT | 1 cut(s) | 862 |
| BfaI | CTAG | 6 cut(s) | 72, 641, 863, 1116, 1299, 1323 |
| BfmI | CTRYAG | 1 cut(s) | 267 |
| BfuAI | ACCTGC | 1 cut(s) | 260 |
| BfuI | GTATCC | 1 cut(s) | 660 |
| BglII | AGATCT | 1 cut(s) | 530 |
| BisI | GCNGC | 5 cut(s) | 267, 624, 771, 774, 1120 |
| BlpI | GCTNAGC | 1 cut(s) | 287 |
| BlsI | GCNGC | 5 cut(s) | 268, 625, 772, 775, 1121 |
| Bme1390I | CCNGG | 5 cut(s) | 224, 475, 597, 878, 985 |
| Bme18I | GGWCC | 2 cut(s) | 1205, 1451 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1393 |
| BmeT110I | CYCGRG | 1 cut(s) | 885 |
| BmgT120I | GGNCC | 3 cut(s) | 226, 1205, 1451 |
| BmiI | GGNNCC | 6 cut(s) | 101, 235, 274, 882, 974, 1452 |
| BmrFI | CCNGG | 5 cut(s) | 224, 475, 597, 878, 985 |
| BmrI | ACTGGG | 1 cut(s) | 1013 |
| BmsI | GCATC | 5 cut(s) | 167, 253, 758, 1004, 1052 |
| BmtI | GCTAGC | 2 cut(s) | 75, 1326 |
| BmuI | ACTGGG | 1 cut(s) | 1013 |
| BpmI | CTGGAG | 2 cut(s) | 370, 451 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 287 |
| BpuEI | CTTGAG | 2 cut(s) | 61, 262 |
| BpuMI | CCSGG | 2 cut(s) | 475, 878 |
| BsaAI | YACGTR | 1 cut(s) | 1033 |
| BsaBI | GATNNNNATC | 1 cut(s) | 810 |
| BsaHI | GRCGYC | 1 cut(s) | 687 |
| BsaJI | CCNNGG | 6 cut(s) | 223, 229, 473, 884, 983, 1139 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 32, 596, 1433, 1434 |
| Bse118I | RCCGGY | 1 cut(s) | 291 |
| Bse1I | ACTGG | 8 cut(s) | 37, 56, 132, 206, 434, 667, 724, 1019 |
| Bse8I | GATNNNNATC | 1 cut(s) | 810 |
| BseBI | CCWGG | 3 cut(s) | 224, 597, 985 |
| BseDI | CCNNGG | 6 cut(s) | 223, 229, 473, 884, 983, 1139 |
| BseGI | GGATG | 8 cut(s) | 401, 496, 580, 840, 873, 931, 1019, 1310 |
| BseJI | GATNNNNATC | 1 cut(s) | 810 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 32, 596, 1433, 1434 |
| BseMII | CTCAG | 4 cut(s) | 111, 342, 759, 896 |
| BseNI | ACTGG | 8 cut(s) | 37, 56, 132, 206, 434, 667, 724, 1019 |
| BseRI | GAGGAG | 2 cut(s) | 291, 844 |
| BseSI | GKGCMC | 1 cut(s) | 63 |
| BseXI | GCAGC | 4 cut(s) | 253, 610, 785, 1131 |
| BsgI | GTGCAG | 1 cut(s) | 609 |
| BshFI | GGCC | 5 cut(s) | 222, 228, 295, 666, 1353 |
| BsiHKAI | GWGCWC | 2 cut(s) | 63, 329 |
| BsiHKCI | CYCGRG | 1 cut(s) | 885 |
| BsiSI | CCGG | 5 cut(s) | 292, 338, 475, 800, 877 |
| BslFI | GGGAC | 1 cut(s) | 1287 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 32, 596, 1433, 1434 |
| BsmAI | GTCTC | 1 cut(s) | 1367 |
| BsmFI | GGGAC | 1 cut(s) | 1287 |
| BsnI | GGCC | 5 cut(s) | 222, 228, 295, 666, 1353 |
| BsoBI | CYCGRG | 1 cut(s) | 885 |
| Bsp1286I | GDGCHC | 2 cut(s) | 63, 329 |
| Bsp1407I | TGTACA | 1 cut(s) | 491 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 287 |
| Bsp19I | CCATGG | 1 cut(s) | 229 |
| BspACI | CCGC | 3 cut(s) | 770, 1335, 1424 |
| BspANI | GGCC | 5 cut(s) | 222, 228, 295, 666, 1353 |
| BspCNI | CTCAG | 4 cut(s) | 112, 341, 758, 897 |
| BspHI | TCATGA | 2 cut(s) | 535, 1093 |
| BspLI | GGNNCC | 6 cut(s) | 101, 235, 274, 882, 974, 1452 |
| BspMAI | CTGCAG | 1 cut(s) | 271 |
| BspMI | ACCTGC | 1 cut(s) | 260 |
| BspOI | GCTAGC | 2 cut(s) | 75, 1326 |
| BspPI | GGATC | 6 cut(s) | 228, 241, 352, 688, 806, 1046 |
| BsrFI | RCCGGY | 1 cut(s) | 291 |
| BsrGI | TGTACA | 1 cut(s) | 491 |
| BsrI | ACTGG | 8 cut(s) | 37, 56, 132, 206, 434, 667, 724, 1019 |
| BssAI | RCCGGY | 1 cut(s) | 291 |
| BssECI | CCNNGG | 6 cut(s) | 223, 229, 473, 884, 983, 1139 |
| BssNI | GRCGYC | 1 cut(s) | 687 |
| BssT1I | CCWWGG | 1 cut(s) | 229 |
| Bst2UI | CCWGG | 3 cut(s) | 224, 597, 985 |
| BstACI | GRCGYC | 1 cut(s) | 687 |
| BstAUI | TGTACA | 1 cut(s) | 491 |
| BstBAI | YACGTR | 1 cut(s) | 1033 |
| BstC8I | GCNNGC | 3 cut(s) | 73, 293, 1324 |
| BstDEI | CTNAG | 5 cut(s) | 120, 287, 328, 745, 905 |
| BstDSI | CCRYGG | 1 cut(s) | 229 |
| BstEII | GGTNACC | 1 cut(s) | 722 |
| BstF5I | GGATG | 8 cut(s) | 401, 496, 580, 840, 873, 931, 1019, 1310 |
| BstHHI | GCGC | 1 cut(s) | 945 |
| BstMAI | GTCTC | 1 cut(s) | 1367 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 292, 1332 |
| BstNI | CCWGG | 3 cut(s) | 224, 597, 985 |
| BstNSI | RCATGY | 1 cut(s) | 455 |
| BstPI | GGTNACC | 1 cut(s) | 722 |
| BstSCI | CCNGG | 5 cut(s) | 222, 473, 595, 876, 983 |
| BstSFI | CTRYAG | 1 cut(s) | 267 |
| BstSLI | GKGCMC | 1 cut(s) | 63 |
| BstV1I | GCAGC | 4 cut(s) | 253, 610, 785, 1131 |
| BstX2I | RGATCY | 4 cut(s) | 233, 344, 530, 680 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 230 |
| BstYI | RGATCY | 4 cut(s) | 233, 344, 530, 680 |
| BsuI | GTATCC | 1 cut(s) | 660 |
| BsuRI | GGCC | 5 cut(s) | 222, 228, 295, 666, 1353 |
| BtgI | CCRYGG | 1 cut(s) | 229 |
| BtgZI | GCGATG | 1 cut(s) | 860 |
| BtsCI | GGATG | 8 cut(s) | 401, 496, 580, 840, 873, 931, 1019, 1310 |
| BtsIMutI | CAGTG | 4 cut(s) | 63, 139, 265, 1026 |
| BveI | ACCTGC | 1 cut(s) | 260 |
| Cac8I | GCNNGC | 3 cut(s) | 73, 293, 1324 |
| CaiI | CAGNNNCTG | 1 cut(s) | 752 |
| CciI | TCATGA | 2 cut(s) | 535, 1093 |
| CfoI | GCGC | 1 cut(s) | 945 |
| Cfr10I | RCCGGY | 1 cut(s) | 291 |
| Cfr13I | GGNCC | 3 cut(s) | 226, 1205, 1451 |
| CseI | GACGC | 2 cut(s) | 676, 765 |
| CsiI | ACCWGGT | 1 cut(s) | 595 |
| Csp6I | GTAC | 6 cut(s) | 209, 492, 570, 734, 1348, 1442 |
| CviQI | GTAC | 6 cut(s) | 209, 492, 570, 734, 1348, 1442 |
| DdeI | CTNAG | 5 cut(s) | 120, 287, 328, 745, 905 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1393 |
| EaeI | YGGCCR | 3 cut(s) | 293, 664, 1351 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1393 |
| EciI | GGCGGA | 1 cut(s) | 1413 |
| Ecl136II | GAGCTC | 1 cut(s) | 327 |
| Eco130I | CCWWGG | 1 cut(s) | 229 |
| Eco24I | GRGCYC | 1 cut(s) | 329 |
| Eco47I | GGWCC | 2 cut(s) | 1205, 1451 |
| Eco53kI | GAGCTC | 1 cut(s) | 327 |
| Eco57I | CTGAAG | 1 cut(s) | 750 |
| Eco72I | CACGTG | 1 cut(s) | 1033 |
| Eco88I | CYCGRG | 1 cut(s) | 885 |
| Eco91I | GGTNACC | 1 cut(s) | 722 |
| EcoICRI | GAGCTC | 1 cut(s) | 327 |
| EcoO65I | GGTNACC | 1 cut(s) | 722 |
| EcoRII | CCWGG | 3 cut(s) | 222, 595, 983 |
| EcoT14I | CCWWGG | 1 cut(s) | 229 |
| EcoT38I | GRGCYC | 1 cut(s) | 329 |
| ErhI | CCWWGG | 1 cut(s) | 229 |
| FaqI | GGGAC | 1 cut(s) | 1287 |
| FbaI | TGATCA | 1 cut(s) | 349 |
| FblI | GTMKAC | 1 cut(s) | 690 |
| Fnu4HI | GCNGC | 5 cut(s) | 267, 624, 771, 774, 1120 |
| FokI | GGATG | 8 cut(s) | 388, 483, 567, 847, 860, 938, 1026, 1297 |
| FriOI | GRGCYC | 1 cut(s) | 329 |
| Fsp4HI | GCNGC | 5 cut(s) | 267, 624, 771, 774, 1120 |
| FspBI | CTAG | 6 cut(s) | 72, 641, 863, 1116, 1299, 1323 |
| GlaI | GCGC | 1 cut(s) | 944 |
| GluI | GCNGC | 5 cut(s) | 267, 624, 771, 774, 1120 |
| GsuI | CTGGAG | 2 cut(s) | 370, 451 |
| HaeIII | GGCC | 5 cut(s) | 222, 228, 295, 666, 1353 |
| HapII | CCGG | 5 cut(s) | 292, 338, 475, 800, 877 |
| HgaI | GACGC | 2 cut(s) | 676, 765 |
| HhaI | GCGC | 1 cut(s) | 945 |
| Hin1I | GRCGYC | 1 cut(s) | 687 |
| Hin6I | GCGC | 1 cut(s) | 943 |
| HinP1I | GCGC | 1 cut(s) | 943 |
| HincII | GTYRAC | 2 cut(s) | 916, 1255 |
| HindII | GTYRAC | 2 cut(s) | 916, 1255 |
| HinfI | GANTC | 8 cut(s) | 4, 359, 383, 1191, 1240, 1275, 1342, 1375 |
| HpaII | CCGG | 5 cut(s) | 292, 338, 475, 800, 877 |
| HphI | GGTGA | 4 cut(s) | 237, 541, 1256, 1397 |
| Hpy166II | GTNNAC | 6 cut(s) | 61, 494, 572, 691, 916, 1255 |
| Hpy188I | TCNGA | 9 cut(s) | 108, 149, 312, 331, 349, 754, 906, 1148, 1201 |
| Hpy188III | TCNNGA | 7 cut(s) | 353, 367, 387, 536, 923, 1094, 1127 |
| Hpy8I | GTNNAC | 6 cut(s) | 61, 494, 572, 691, 916, 1255 |
| HpyAV | CCTTC | 5 cut(s) | 30, 258, 663, 670, 1073 |
| HpyCH4IV | ACGT | 1 cut(s) | 1032 |
| HpyCH4V | TGCA | 6 cut(s) | 61, 158, 176, 269, 626, 1002 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 292, 1332 |
| HpyF3I | CTNAG | 5 cut(s) | 120, 287, 328, 745, 905 |
| HpySE526I | ACGT | 1 cut(s) | 1032 |
| Hsp92I | GRCGYC | 1 cut(s) | 687 |
| HspAI | GCGC | 1 cut(s) | 943 |
| KroI | GCCGGC | 1 cut(s) | 291 |
| KroNI | GCCGGC | 1 cut(s) | 293 |
| Ksp22I | TGATCA | 1 cut(s) | 349 |
| LmnI | GCTCC | 3 cut(s) | 477, 880, 987 |
| Lsp1109I | GCAGC | 4 cut(s) | 253, 610, 785, 1131 |
| LweI | GCATC | 5 cut(s) | 167, 253, 758, 1004, 1052 |
| MabI | ACCWGGT | 1 cut(s) | 595 |
| MaeI | CTAG | 6 cut(s) | 72, 641, 863, 1116, 1299, 1323 |
| MaeII | ACGT | 1 cut(s) | 1032 |
| MaeIII | GTNAC | 2 cut(s) | 722, 1385 |
| MboII | GAAGA | 3 cut(s) | 243, 644, 648 |
| MflI | RGATCY | 4 cut(s) | 233, 344, 530, 680 |
| MhlI | GDGCHC | 2 cut(s) | 63, 329 |
| MluCI | AATT | 5 cut(s) | 137, 467, 502, 1279, 1405 |
| MlyI | GAGTC | 3 cut(s) | 377, 1284, 1369 |
| MmeI | TCCRAC | 2 cut(s) | 1168, 1245 |
| MroNI | GCCGGC | 1 cut(s) | 291 |
| MseI | TTAA | 1 cut(s) | 1328 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1092, 1269 |
| MspI | CCGG | 5 cut(s) | 292, 338, 475, 800, 877 |
| MspR9I | CCNGG | 5 cut(s) | 224, 475, 597, 878, 985 |
| MvaI | CCWGG | 3 cut(s) | 224, 597, 985 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 292, 1332 |
| NaeI | GCCGGC | 1 cut(s) | 293 |
| NciI | CCSGG | 2 cut(s) | 475, 878 |
| NcoI | CCATGG | 1 cut(s) | 229 |
| NgoMIV | GCCGGC | 1 cut(s) | 291 |
| NheI | GCTAGC | 2 cut(s) | 71, 1322 |
| NlaIV | GGNNCC | 6 cut(s) | 101, 235, 274, 882, 974, 1452 |
| NmeAIII | GCCGAG | 1 cut(s) | 692 |
| NmuCI | GTSAC | 1 cut(s) | 1385 |
| NspI | RCATGY | 1 cut(s) | 455 |
| PagI | TCATGA | 2 cut(s) | 535, 1093 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1221 |
| PdiI | GCCGGC | 1 cut(s) | 293 |
| PfeI | GAWTC | 5 cut(s) | 4, 359, 1191, 1240, 1342 |
| PfoI | TCCNGGA | 1 cut(s) | 876 |
| PkrI | GCNGC | 5 cut(s) | 268, 625, 772, 775, 1121 |
| PleI | GAGTC | 3 cut(s) | 377, 1283, 1369 |
| PmaCI | CACGTG | 1 cut(s) | 1033 |
| PmlI | CACGTG | 1 cut(s) | 1033 |
| PpsI | GAGTC | 3 cut(s) | 377, 1283, 1369 |
| Ppu21I | YACGTR | 1 cut(s) | 1033 |
| PsiI | TTATAA | 2 cut(s) | 426, 486 |
| Psp124BI | GAGCTC | 1 cut(s) | 329 |
| Psp6I | CCWGG | 3 cut(s) | 222, 595, 983 |
| PspCI | CACGTG | 1 cut(s) | 1033 |
| PspEI | GGTNACC | 1 cut(s) | 722 |
| PspGI | CCWGG | 3 cut(s) | 222, 595, 983 |
| PspN4I | GGNNCC | 6 cut(s) | 101, 235, 274, 882, 974, 1452 |
| PspPI | GGNCC | 3 cut(s) | 226, 1205, 1451 |
| PstI | CTGCAG | 1 cut(s) | 271 |
| PstNI | CAGNNNCTG | 1 cut(s) | 752 |
| PsuI | RGATCY | 4 cut(s) | 233, 344, 530, 680 |
| RsaI | GTAC | 6 cut(s) | 210, 493, 571, 735, 1349, 1443 |
| RsaNI | GTAC | 6 cut(s) | 209, 492, 570, 734, 1348, 1442 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1092, 1269 |
| SacI | GAGCTC | 1 cut(s) | 329 |
| SaqAI | TTAA | 1 cut(s) | 1328 |
| SatI | GCNGC | 5 cut(s) | 267, 624, 771, 774, 1120 |
| Sau96I | GGNCC | 3 cut(s) | 226, 1205, 1451 |
| SchI | GAGTC | 3 cut(s) | 377, 1284, 1369 |
| ScrFI | CCNGG | 5 cut(s) | 224, 475, 597, 878, 985 |
| SduI | GDGCHC | 2 cut(s) | 63, 329 |
| SexAI | ACCWGGT | 1 cut(s) | 595 |
| SfaNI | GCATC | 5 cut(s) | 167, 253, 758, 1004, 1052 |
| SfcI | CTRYAG | 1 cut(s) | 267 |
| SinI | GGWCC | 2 cut(s) | 1205, 1451 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1092, 1269 |
| SmlI | CTYRAG | 2 cut(s) | 76, 277 |
| SmoI | CTYRAG | 2 cut(s) | 76, 277 |
| SpeI | ACTAGT | 1 cut(s) | 862 |
| Sse9I | AATT | 5 cut(s) | 137, 467, 502, 1279, 1405 |
| SsiI | CCGC | 3 cut(s) | 770, 1335, 1424 |
| SspMI | CTAG | 6 cut(s) | 72, 641, 863, 1116, 1299, 1323 |
| SstI | GAGCTC | 1 cut(s) | 329 |
| StyD4I | CCNGG | 5 cut(s) | 222, 473, 595, 876, 983 |
| StyI | CCWWGG | 1 cut(s) | 229 |
| TaiI | ACGT | 1 cut(s) | 1035 |
| TaqI | TCGA | 2 cut(s) | 52, 254 |
| TasI | AATT | 5 cut(s) | 137, 467, 502, 1279, 1405 |
| TatI | WGTACW | 3 cut(s) | 208, 491, 1441 |
| TauI | GCSGC | 1 cut(s) | 773 |
| TfiI | GAWTC | 5 cut(s) | 4, 359, 1191, 1240, 1342 |
| Tru1I | TTAA | 1 cut(s) | 1328 |
| Tru9I | TTAA | 1 cut(s) | 1328 |
| TscAI | CASTG | 4 cut(s) | 63, 139, 265, 1026 |
| TseFI | GTSAC | 1 cut(s) | 1385 |
| TseI | GCWGC | 4 cut(s) | 266, 623, 773, 1119 |
| Tsp45I | GTSAC | 1 cut(s) | 1385 |
| TspDTI | ATGAA | 5 cut(s) | 726, 1170, 1283, 1355, 1398 |
| TspGWI | ACGGA | 2 cut(s) | 841, 1443 |
| TspRI | CASTG | 4 cut(s) | 63, 139, 265, 1026 |
| VneI | GTGCAC | 1 cut(s) | 59 |
| VpaK11BI | GGWCC | 2 cut(s) | 1205, 1451 |
| XapI | RAATTY | 2 cut(s) | 137, 467 |
| XceI | RCATGY | 1 cut(s) | 455 |
| XmiI | GTMKAC | 1 cut(s) | 690 |
| XspI | CTAG | 6 cut(s) | 72, 641, 863, 1116, 1299, 1323 |