AT4G26640
WRKY Family

Transcription factor

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Reverse (-)
13437005 .. 13441884
4880 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G26640.5

Sequence Viewer

Length: 1458 bp
ATGATTCTGTTGCCAGAACCTTCCCCTACTACTGGTTCTTTGTTCAAGCCTCGACCAGTGCACATTTCTGCTAGCTCAAGTTCTTATACAGGCAGGGGGTTCCATCAGAACACCTTTACTGAGCAGAAGTCCAGTGAATTTGAGTTCAGACCTCCTGCATCAAATATGGTATATGCAGAGCTTGGCAAGATTAGAAGTGAGCCACCAGTACATTTTCAAGGCCAGGGCCATGGATCCTCACACTCACCTTCTTCGATCAGTGATGCTGCAGGTTCCTCAAGTGAGCTAAGCCGGCCAACTCCTCCTTGTCAGATGACACCAACGAGCTCAGATATTCCGGCTGGATCTGATCAAGAGGAATCAATCCAGACTTCCCAAAATGACTCCAGAGGAAGCACTCCATCCATCTTGGCTGATGATGGTTATAACTGGAGAAAATATGGTCAAAAGCATGTCAAAGGGAGTGAATTTCCCCGGAGCTATTATAAATGTACACATCCTAATTGTGAAGTGAAAAAGTTATTTGAAAGATCTCATGATGGGCAGATCACCGATATTATATACAAGGGTACACATGACCATCCTAAACCTCAACCTGGTCGCCGAAACTCTGGTGGTATGGCTGCACAAGAAGAAAGGCTAGACAAGTATCCTTCTTCAACTGGCCGAGATGAGAAGGGATCTGGCGTCTACAACTTGTCTAACCCCAATGAACAAACTGGTAACCCTGAAGTACCTCCTATCTCAGCATCTGACGATGGTGGAGAAGCGGCAGCGTCAAATAGGAATAAAGATGAGCCGGACGATGATGATCCATTCTCAAAACGGAGGAGGATGGAGGGTGCGATGGAAATAACTCCACTAGTGAAACCCATCCGGGAGCCTCGGGTTGTTGTTCAAACTCTGAGTGAGGTTGACATTCTGGATGATGGTTATAGATGGCGCAAATATGGGCAGAAAGTCGTAAGGGGGAACCCAAATCCCAGGAGCTACTACAAATGCACAGCTCATGGATGCCCAGTGAGAAAACACGTGGAGAGAGCATCACATGATCCAAAAGCTGTAATAACAACATACGAAGGCAAACACGATCATGATGTTCCCACTTCAAAGTCTAGCAGCAATCACGAAATCCAGCCTCGGTTCAGACCAGATGAAACAGACACCATCAGCCTCAATCTTGGTGTTGGAATCTCATCTGATGGACCTAACCACGCTTCCAACGAACATCAGCACCAGAATCAACAACTTGTCAACCAAACTCACCCAAATGGAGTCAATTTCAGGTTTGTTCATGCTAGTCCCATGTCATCCTACTATGCTAGCTTAAATAGCGGTATGAATCAGTACGGCCAGAGAGAAACAAAGAACGAGACTCAAAATGGTGACATCTCGTCCTTGAACAATTCATCTTACCCATATCCGCCCAACATGGGGAGAGTACAATCGGGTCCGTAA

Protein Analysis

485

Amino Acids

53.6

Weight (kDa)

6.6

Isoelectric Point (pI)

46.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WRKY PF03106 35 - 91 7.6e-26 WRKY DNA -binding domain
WRKY PF03106 205 - 262 3.8e-26 WRKY DNA -binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 426, 486
Acc36I ACCTGC 1 cut(s) 260
AccI GTMKAC 1 cut(s) 690
AciI CCGC 3 cut(s) 770, 1335, 1424
AclWI GGATC 6 cut(s) 228, 241, 352, 688, 806, 1046
AcoI YGGCCR 3 cut(s) 293, 664, 1351
AcsI RAATTY 2 cut(s) 137, 467
AcuI CTGAAG 1 cut(s) 750
AcvI CACGTG 1 cut(s) 1033
AcyI GRCGYC 1 cut(s) 687
AfaI GTAC 6 cut(s) 210, 493, 571, 735, 1349, 1443
AfiI CCNNNNNNNGG 4 cut(s) 32, 596, 1433, 1434
AflIII ACRYGT 1 cut(s) 1030
AgsI TTSAA 7 cut(s) 46, 218, 527, 660, 899, 1110, 1402
AhdI GACNNNNNGTC 1 cut(s) 1393
AhlI ACTAGT 1 cut(s) 862
AjnI CCWGG 3 cut(s) 222, 595, 983
AluBI AGCT 9 cut(s) 75, 181, 286, 327, 480, 990, 1007, 1061, 1326
AluI AGCT 9 cut(s) 75, 181, 286, 327, 480, 990, 1007, 1061, 1326
Alw21I GWGCWC 2 cut(s) 63, 329
Alw26I GTCTC 1 cut(s) 1367
Alw44I GTGCAC 1 cut(s) 59
AlwI GGATC 6 cut(s) 228, 241, 352, 688, 806, 1046
AlwNI CAGNNNCTG 1 cut(s) 752
Ama87I CYCGRG 1 cut(s) 885
AoxI GGCC 5 cut(s) 220, 226, 293, 664, 1351
ApaLI GTGCAC 1 cut(s) 59
ApeKI GCWGC 4 cut(s) 266, 623, 773, 1119
ApoI RAATTY 2 cut(s) 137, 467
AspLEI GCGC 1 cut(s) 945
AspS9I GGNCC 3 cut(s) 226, 1205, 1451
AsuC2I CCSGG 2 cut(s) 475, 878
AsuHPI GGTGA 4 cut(s) 237, 541, 1256, 1397
AsuNHI GCTAGC 2 cut(s) 71, 1322
AvaI CYCGRG 1 cut(s) 885
AvaII GGWCC 2 cut(s) 1205, 1451
BaeGI GKGCMC 1 cut(s) 63
BamHI GGATCC 1 cut(s) 233
BanII GRGCYC 1 cut(s) 329
BbrPI CACGTG 1 cut(s) 1033
Bbv12I GWGCWC 2 cut(s) 63, 329
BbvI GCAGC 4 cut(s) 253, 610, 785, 1131
BceAI ACGGC 1 cut(s) 1366
BciT130I CCWGG 3 cut(s) 224, 597, 985
BciVI GTATCC 1 cut(s) 660
BclI TGATCA 1 cut(s) 349
BcnI CCSGG 2 cut(s) 475, 878
BcoDI GTCTC 1 cut(s) 1367
BcuI ACTAGT 1 cut(s) 862
BfaI CTAG 6 cut(s) 72, 641, 863, 1116, 1299, 1323
BfmI CTRYAG 1 cut(s) 267
BfuAI ACCTGC 1 cut(s) 260
BfuI GTATCC 1 cut(s) 660
BglII AGATCT 1 cut(s) 530
BisI GCNGC 5 cut(s) 267, 624, 771, 774, 1120
BlpI GCTNAGC 1 cut(s) 287
BlsI GCNGC 5 cut(s) 268, 625, 772, 775, 1121
Bme1390I CCNGG 5 cut(s) 224, 475, 597, 878, 985
Bme18I GGWCC 2 cut(s) 1205, 1451
BmeRI GACNNNNNGTC 1 cut(s) 1393
BmeT110I CYCGRG 1 cut(s) 885
BmgT120I GGNCC 3 cut(s) 226, 1205, 1451
BmiI GGNNCC 6 cut(s) 101, 235, 274, 882, 974, 1452
BmrFI CCNGG 5 cut(s) 224, 475, 597, 878, 985
BmrI ACTGGG 1 cut(s) 1013
BmsI GCATC 5 cut(s) 167, 253, 758, 1004, 1052
BmtI GCTAGC 2 cut(s) 75, 1326
BmuI ACTGGG 1 cut(s) 1013
BpmI CTGGAG 2 cut(s) 370, 451
Bpu1102I GCTNAGC 1 cut(s) 287
BpuEI CTTGAG 2 cut(s) 61, 262
BpuMI CCSGG 2 cut(s) 475, 878
BsaAI YACGTR 1 cut(s) 1033
BsaBI GATNNNNATC 1 cut(s) 810
BsaHI GRCGYC 1 cut(s) 687
BsaJI CCNNGG 6 cut(s) 223, 229, 473, 884, 983, 1139
Bsc4I CCNNNNNNNGG 4 cut(s) 32, 596, 1433, 1434
Bse118I RCCGGY 1 cut(s) 291
Bse1I ACTGG 8 cut(s) 37, 56, 132, 206, 434, 667, 724, 1019
Bse8I GATNNNNATC 1 cut(s) 810
BseBI CCWGG 3 cut(s) 224, 597, 985
BseDI CCNNGG 6 cut(s) 223, 229, 473, 884, 983, 1139
BseGI GGATG 8 cut(s) 401, 496, 580, 840, 873, 931, 1019, 1310
BseJI GATNNNNATC 1 cut(s) 810
BseLI CCNNNNNNNGG 4 cut(s) 32, 596, 1433, 1434
BseMII CTCAG 4 cut(s) 111, 342, 759, 896
BseNI ACTGG 8 cut(s) 37, 56, 132, 206, 434, 667, 724, 1019
BseRI GAGGAG 2 cut(s) 291, 844
BseSI GKGCMC 1 cut(s) 63
BseXI GCAGC 4 cut(s) 253, 610, 785, 1131
BsgI GTGCAG 1 cut(s) 609
BshFI GGCC 5 cut(s) 222, 228, 295, 666, 1353
BsiHKAI GWGCWC 2 cut(s) 63, 329
BsiHKCI CYCGRG 1 cut(s) 885
BsiSI CCGG 5 cut(s) 292, 338, 475, 800, 877
BslFI GGGAC 1 cut(s) 1287
BslI CCNNNNNNNGG 4 cut(s) 32, 596, 1433, 1434
BsmAI GTCTC 1 cut(s) 1367
BsmFI GGGAC 1 cut(s) 1287
BsnI GGCC 5 cut(s) 222, 228, 295, 666, 1353
BsoBI CYCGRG 1 cut(s) 885
Bsp1286I GDGCHC 2 cut(s) 63, 329
Bsp1407I TGTACA 1 cut(s) 491
Bsp1720I GCTNAGC 1 cut(s) 287
Bsp19I CCATGG 1 cut(s) 229
BspACI CCGC 3 cut(s) 770, 1335, 1424
BspANI GGCC 5 cut(s) 222, 228, 295, 666, 1353
BspCNI CTCAG 4 cut(s) 112, 341, 758, 897
BspHI TCATGA 2 cut(s) 535, 1093
BspLI GGNNCC 6 cut(s) 101, 235, 274, 882, 974, 1452
BspMAI CTGCAG 1 cut(s) 271
BspMI ACCTGC 1 cut(s) 260
BspOI GCTAGC 2 cut(s) 75, 1326
BspPI GGATC 6 cut(s) 228, 241, 352, 688, 806, 1046
BsrFI RCCGGY 1 cut(s) 291
BsrGI TGTACA 1 cut(s) 491
BsrI ACTGG 8 cut(s) 37, 56, 132, 206, 434, 667, 724, 1019
BssAI RCCGGY 1 cut(s) 291
BssECI CCNNGG 6 cut(s) 223, 229, 473, 884, 983, 1139
BssNI GRCGYC 1 cut(s) 687
BssT1I CCWWGG 1 cut(s) 229
Bst2UI CCWGG 3 cut(s) 224, 597, 985
BstACI GRCGYC 1 cut(s) 687
BstAUI TGTACA 1 cut(s) 491
BstBAI YACGTR 1 cut(s) 1033
BstC8I GCNNGC 3 cut(s) 73, 293, 1324
BstDEI CTNAG 5 cut(s) 120, 287, 328, 745, 905
BstDSI CCRYGG 1 cut(s) 229
BstEII GGTNACC 1 cut(s) 722
BstF5I GGATG 8 cut(s) 401, 496, 580, 840, 873, 931, 1019, 1310
BstHHI GCGC 1 cut(s) 945
BstMAI GTCTC 1 cut(s) 1367
BstMWI GCNNNNNNNGC 2 cut(s) 292, 1332
BstNI CCWGG 3 cut(s) 224, 597, 985
BstNSI RCATGY 1 cut(s) 455
BstPI GGTNACC 1 cut(s) 722
BstSCI CCNGG 5 cut(s) 222, 473, 595, 876, 983
BstSFI CTRYAG 1 cut(s) 267
BstSLI GKGCMC 1 cut(s) 63
BstV1I GCAGC 4 cut(s) 253, 610, 785, 1131
BstX2I RGATCY 4 cut(s) 233, 344, 530, 680
BstXI CCANNNNNNTGG 1 cut(s) 230
BstYI RGATCY 4 cut(s) 233, 344, 530, 680
BsuI GTATCC 1 cut(s) 660
BsuRI GGCC 5 cut(s) 222, 228, 295, 666, 1353
BtgI CCRYGG 1 cut(s) 229
BtgZI GCGATG 1 cut(s) 860
BtsCI GGATG 8 cut(s) 401, 496, 580, 840, 873, 931, 1019, 1310
BtsIMutI CAGTG 4 cut(s) 63, 139, 265, 1026
BveI ACCTGC 1 cut(s) 260
Cac8I GCNNGC 3 cut(s) 73, 293, 1324
CaiI CAGNNNCTG 1 cut(s) 752
CciI TCATGA 2 cut(s) 535, 1093
CfoI GCGC 1 cut(s) 945
Cfr10I RCCGGY 1 cut(s) 291
Cfr13I GGNCC 3 cut(s) 226, 1205, 1451
CseI GACGC 2 cut(s) 676, 765
CsiI ACCWGGT 1 cut(s) 595
Csp6I GTAC 6 cut(s) 209, 492, 570, 734, 1348, 1442
CviQI GTAC 6 cut(s) 209, 492, 570, 734, 1348, 1442
DdeI CTNAG 5 cut(s) 120, 287, 328, 745, 905
DriI GACNNNNNGTC 1 cut(s) 1393
EaeI YGGCCR 3 cut(s) 293, 664, 1351
Eam1105I GACNNNNNGTC 1 cut(s) 1393
EciI GGCGGA 1 cut(s) 1413
Ecl136II GAGCTC 1 cut(s) 327
Eco130I CCWWGG 1 cut(s) 229
Eco24I GRGCYC 1 cut(s) 329
Eco47I GGWCC 2 cut(s) 1205, 1451
Eco53kI GAGCTC 1 cut(s) 327
Eco57I CTGAAG 1 cut(s) 750
Eco72I CACGTG 1 cut(s) 1033
Eco88I CYCGRG 1 cut(s) 885
Eco91I GGTNACC 1 cut(s) 722
EcoICRI GAGCTC 1 cut(s) 327
EcoO65I GGTNACC 1 cut(s) 722
EcoRII CCWGG 3 cut(s) 222, 595, 983
EcoT14I CCWWGG 1 cut(s) 229
EcoT38I GRGCYC 1 cut(s) 329
ErhI CCWWGG 1 cut(s) 229
FaqI GGGAC 1 cut(s) 1287
FbaI TGATCA 1 cut(s) 349
FblI GTMKAC 1 cut(s) 690
Fnu4HI GCNGC 5 cut(s) 267, 624, 771, 774, 1120
FokI GGATG 8 cut(s) 388, 483, 567, 847, 860, 938, 1026, 1297
FriOI GRGCYC 1 cut(s) 329
Fsp4HI GCNGC 5 cut(s) 267, 624, 771, 774, 1120
FspBI CTAG 6 cut(s) 72, 641, 863, 1116, 1299, 1323
GlaI GCGC 1 cut(s) 944
GluI GCNGC 5 cut(s) 267, 624, 771, 774, 1120
GsuI CTGGAG 2 cut(s) 370, 451
HaeIII GGCC 5 cut(s) 222, 228, 295, 666, 1353
HapII CCGG 5 cut(s) 292, 338, 475, 800, 877
HgaI GACGC 2 cut(s) 676, 765
HhaI GCGC 1 cut(s) 945
Hin1I GRCGYC 1 cut(s) 687
Hin6I GCGC 1 cut(s) 943
HinP1I GCGC 1 cut(s) 943
HincII GTYRAC 2 cut(s) 916, 1255
HindII GTYRAC 2 cut(s) 916, 1255
HinfI GANTC 8 cut(s) 4, 359, 383, 1191, 1240, 1275, 1342, 1375
HpaII CCGG 5 cut(s) 292, 338, 475, 800, 877
HphI GGTGA 4 cut(s) 237, 541, 1256, 1397
Hpy166II GTNNAC 6 cut(s) 61, 494, 572, 691, 916, 1255
Hpy188I TCNGA 9 cut(s) 108, 149, 312, 331, 349, 754, 906, 1148, 1201
Hpy188III TCNNGA 7 cut(s) 353, 367, 387, 536, 923, 1094, 1127
Hpy8I GTNNAC 6 cut(s) 61, 494, 572, 691, 916, 1255
HpyAV CCTTC 5 cut(s) 30, 258, 663, 670, 1073
HpyCH4IV ACGT 1 cut(s) 1032
HpyCH4V TGCA 6 cut(s) 61, 158, 176, 269, 626, 1002
HpyF10VI GCNNNNNNNGC 2 cut(s) 292, 1332
HpyF3I CTNAG 5 cut(s) 120, 287, 328, 745, 905
HpySE526I ACGT 1 cut(s) 1032
Hsp92I GRCGYC 1 cut(s) 687
HspAI GCGC 1 cut(s) 943
KroI GCCGGC 1 cut(s) 291
KroNI GCCGGC 1 cut(s) 293
Ksp22I TGATCA 1 cut(s) 349
LmnI GCTCC 3 cut(s) 477, 880, 987
Lsp1109I GCAGC 4 cut(s) 253, 610, 785, 1131
LweI GCATC 5 cut(s) 167, 253, 758, 1004, 1052
MabI ACCWGGT 1 cut(s) 595
MaeI CTAG 6 cut(s) 72, 641, 863, 1116, 1299, 1323
MaeII ACGT 1 cut(s) 1032
MaeIII GTNAC 2 cut(s) 722, 1385
MboII GAAGA 3 cut(s) 243, 644, 648
MflI RGATCY 4 cut(s) 233, 344, 530, 680
MhlI GDGCHC 2 cut(s) 63, 329
MluCI AATT 5 cut(s) 137, 467, 502, 1279, 1405
MlyI GAGTC 3 cut(s) 377, 1284, 1369
MmeI TCCRAC 2 cut(s) 1168, 1245
MroNI GCCGGC 1 cut(s) 291
MseI TTAA 1 cut(s) 1328
MslI CAYNNNNRTG 2 cut(s) 1092, 1269
MspI CCGG 5 cut(s) 292, 338, 475, 800, 877
MspR9I CCNGG 5 cut(s) 224, 475, 597, 878, 985
MvaI CCWGG 3 cut(s) 224, 597, 985
MwoI GCNNNNNNNGC 2 cut(s) 292, 1332
NaeI GCCGGC 1 cut(s) 293
NciI CCSGG 2 cut(s) 475, 878
NcoI CCATGG 1 cut(s) 229
NgoMIV GCCGGC 1 cut(s) 291
NheI GCTAGC 2 cut(s) 71, 1322
NlaIV GGNNCC 6 cut(s) 101, 235, 274, 882, 974, 1452
NmeAIII GCCGAG 1 cut(s) 692
NmuCI GTSAC 1 cut(s) 1385
NspI RCATGY 1 cut(s) 455
PagI TCATGA 2 cut(s) 535, 1093
PcsI WCGNNNNNNNCGW 1 cut(s) 1221
PdiI GCCGGC 1 cut(s) 293
PfeI GAWTC 5 cut(s) 4, 359, 1191, 1240, 1342
PfoI TCCNGGA 1 cut(s) 876
PkrI GCNGC 5 cut(s) 268, 625, 772, 775, 1121
PleI GAGTC 3 cut(s) 377, 1283, 1369
PmaCI CACGTG 1 cut(s) 1033
PmlI CACGTG 1 cut(s) 1033
PpsI GAGTC 3 cut(s) 377, 1283, 1369
Ppu21I YACGTR 1 cut(s) 1033
PsiI TTATAA 2 cut(s) 426, 486
Psp124BI GAGCTC 1 cut(s) 329
Psp6I CCWGG 3 cut(s) 222, 595, 983
PspCI CACGTG 1 cut(s) 1033
PspEI GGTNACC 1 cut(s) 722
PspGI CCWGG 3 cut(s) 222, 595, 983
PspN4I GGNNCC 6 cut(s) 101, 235, 274, 882, 974, 1452
PspPI GGNCC 3 cut(s) 226, 1205, 1451
PstI CTGCAG 1 cut(s) 271
PstNI CAGNNNCTG 1 cut(s) 752
PsuI RGATCY 4 cut(s) 233, 344, 530, 680
RsaI GTAC 6 cut(s) 210, 493, 571, 735, 1349, 1443
RsaNI GTAC 6 cut(s) 209, 492, 570, 734, 1348, 1442
RseI CAYNNNNRTG 2 cut(s) 1092, 1269
SacI GAGCTC 1 cut(s) 329
SaqAI TTAA 1 cut(s) 1328
SatI GCNGC 5 cut(s) 267, 624, 771, 774, 1120
Sau96I GGNCC 3 cut(s) 226, 1205, 1451
SchI GAGTC 3 cut(s) 377, 1284, 1369
ScrFI CCNGG 5 cut(s) 224, 475, 597, 878, 985
SduI GDGCHC 2 cut(s) 63, 329
SexAI ACCWGGT 1 cut(s) 595
SfaNI GCATC 5 cut(s) 167, 253, 758, 1004, 1052
SfcI CTRYAG 1 cut(s) 267
SinI GGWCC 2 cut(s) 1205, 1451
SmiMI CAYNNNNRTG 2 cut(s) 1092, 1269
SmlI CTYRAG 2 cut(s) 76, 277
SmoI CTYRAG 2 cut(s) 76, 277
SpeI ACTAGT 1 cut(s) 862
Sse9I AATT 5 cut(s) 137, 467, 502, 1279, 1405
SsiI CCGC 3 cut(s) 770, 1335, 1424
SspMI CTAG 6 cut(s) 72, 641, 863, 1116, 1299, 1323
SstI GAGCTC 1 cut(s) 329
StyD4I CCNGG 5 cut(s) 222, 473, 595, 876, 983
StyI CCWWGG 1 cut(s) 229
TaiI ACGT 1 cut(s) 1035
TaqI TCGA 2 cut(s) 52, 254
TasI AATT 5 cut(s) 137, 467, 502, 1279, 1405
TatI WGTACW 3 cut(s) 208, 491, 1441
TauI GCSGC 1 cut(s) 773
TfiI GAWTC 5 cut(s) 4, 359, 1191, 1240, 1342
Tru1I TTAA 1 cut(s) 1328
Tru9I TTAA 1 cut(s) 1328
TscAI CASTG 4 cut(s) 63, 139, 265, 1026
TseFI GTSAC 1 cut(s) 1385
TseI GCWGC 4 cut(s) 266, 623, 773, 1119
Tsp45I GTSAC 1 cut(s) 1385
TspDTI ATGAA 5 cut(s) 726, 1170, 1283, 1355, 1398
TspGWI ACGGA 2 cut(s) 841, 1443
TspRI CASTG 4 cut(s) 63, 139, 265, 1026
VneI GTGCAC 1 cut(s) 59
VpaK11BI GGWCC 2 cut(s) 1205, 1451
XapI RAATTY 2 cut(s) 137, 467
XceI RCATGY 1 cut(s) 455
XmiI GTMKAC 1 cut(s) 690
XspI CTAG 6 cut(s) 72, 641, 863, 1116, 1299, 1323
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.