Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0004158

Physical Location & Seq

Genomic Coordinates Forward (+)

38803764 .. 38808861

Gene Structure 5098 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G026730.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1752 bp

ATGGACTCGACCGCACCGGAATGCCCCCTGCCTCCCTCCGACGAACTCGATCCGGGCCTCACCGACTTCCATCCCGGCTCCGACCCGGCCTTCTCCACTTCCCGTTCCAGCGGTGGTGGGGCCAAGTACAAGCTCATGTCGCCGGCGAAGCTCCCGATCTCGAGGTCCCCCTGCCTCACTATCCCTCCCGGCCTCACTCCGACGTCGTTTCTCGAGTCCCCGGTGCTCCTCTCCAACATGAAGGCAGAACCTTCTCCAACTACCGGGTCCTTTTTGAATCCTAAAATGGTCTATGGGACTGCGAATTCTACATATTCAGCAACCATGGTTTGCTCTGATGAAAGAAATTCTGGAAGCTTTGAGTTTAAGCCCCATTCTAGATTGAATATGGTTACTACGGATTATGACCACCAGAGCAATGAGCAGGCTGTGCAAGTCCAAGGTCAAGGTCAAGGTCAGTCTCAATCACTTGCGTCACCACCTTTGGTTAAGAGTGAGATGGCAGGCTCCTCAAATCAATCAGGATTACCAGCTCCTGTTCATATGGTCTCGTCAGGAGCTAGTGCACCTGTTGAAGGTGATGCGGATGATATAAGTCAGAGGGCAAATCCAAATTCTGGTGTCCAAACATCACAGTTTGATCATAAAGGAAGTGGGCCTTCAGTATCTTCTGATGATGGCTATAACTGGCGAAAATATGGACAAAAGCATGTTAAAGGAAGTGAATTTCCTCGCAGTTATTACAAATGCACACATCCCAACTGTGAAGTGAAGAAACTGTTTGAGCGATCTCATGAGGGACATATAACAGAGATTATCTACAAGGGTACACATGATCACCCTAAGCCTCAACCTAGTCGACGATATAATACCGGTGCTATGATGAATGTCCAGGAAGAGAGATCTGACAAGGCTTTATCTTTGACTGGCCGAGATGACAAGTCATCTAGTATGTATGGGCAAATGTCTTGTACCAATGAGCCAAATAGCACTCCGGAGCTATCCCCTGTCAGAGGAAATGATGGTAGTGTTGAAGGAACTGGCTCACTATCAACTAGAATACTCGATGAGGTTGATGATGATGACCCATTCTCTAAAAGGAGGAGGATGGATGTTGGTGGAATTGATGTTACACCAGTTGTTAAGCCTATCCGGGAACCACGAGTTGTTGTTCAAACTCTGAGTGAGGTTGATATATTGGATGATGGATACCGCTGGCGCAAATATGGTCAGAAAGTTGTGAGGGGAAATCCTAATCCAAGGAGCTATTACAAGTGCACAAATGCGGGATGCCCTGTTAGGAAGCATGTGGAGAGGGCATCCCATGATCCAAAAGCAGTTATAACTACATATGAGGGAAAACATAATCATGATGTCCCAACCGCAAGGACTAGTAGCCATGACACTTCGGGACCAACAACCGTGAATGCCCCTTCGAGGATTAGAACAGAGGAAAATGACACCATAAGCCTTGATCTTGGTGTTGGAATGAGCTCTGCTGCTGAAAATAGATCCAACAATCACCTGCGATTGCACTCTGAACTAGCAGAAAGACAAACTCACCCTAGTTCCAATTTTAAGGCTGTTCAAACTACCCCTGCTCCGTCATACTATGGTGTTTTAAATAGTGGCATGAATCAGTATGGATCTAGAGAAAATCCAAGTGAATCACGTAGCATCGAGATTCCACCTTTAAACCATTCTTCTTACCCATATCCACAGAACATGGGAAGAGTACTAACAGGTCCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0006950 GO:0008150 GO:0009611 GO:0009889 GO:0009891 GO:0009893 GO:0009961 GO:0010033 GO:0010243 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0042221 GO:0043200 GO:0043565 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1901698 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WRKY

Protein Analysis

583

Amino Acids

63.49

Weight (kDa)

6.48

Isoelectric Point (pI)

55.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WRKY	PF03106	225 - 281	4.2e-25	WRKY DNA -binding domain
WRKY	PF03106	401 - 458	1.2e-26	WRKY DNA -binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004158)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26640 AT4G26640 AT4G26640 AT4G26640 AT4G26640 AT4G26640 AT4G26640
fragaria_vesca	FvH4_3g24010 FvH4_3g24010
malus_domestica	MD03G1188900.v1.1 MD11G1205000.v1.1
prunus_persica	Prupe.4G232600_v2.0.a1 Prupe.4G232600_v2.0.a1 Prupe.4G232600_v2.0.a1
pyrus_communis	pycom03g14170 pycom11g17770
rosa_chinensis	RchiOBHm_Chr5g0042581 RchiOBHm_Chr5g0042601
rosa_laevigata	RLG00000034142
rosa_multiflora	Rmu_sc0004704.1_g000005 Rmu_sc0004704.1_g000010 Rmu_sc0012301.1_g000004 Rmu_sc0012301.1_g000009
rosa_roxburghii	Rroxscaffold_1G00038060
rosa_rugosa	Rorug05G0202900 Rorug05G0203000 Rorug05G0203100
rosa_samantha	Rh5AG287900 Rh5AG288300 Rh5BG292300 Rh5CG324700 Rh5DG302100
rosa_wichuraiana	Rw5G026730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1343
AarI	CACCTGC	1 cut(s)	1533
AatII	GACGTC	1 cut(s)	206
Acc36I	ACCTGC	1 cut(s)	1533
AccB7I	CCANNNNNTGG	1 cut(s)	617
AccI	GTMKAC	1 cut(s)	859
AccIII	TCCGGA	1 cut(s)	994
AciI	CCGC	6 cut(s)	12, 111, 584, 1213, 1286, 1383
AclWI	GGATC	4 cut(s)	44, 1322, 1506, 1654
AcoI	YGGCCR	1 cut(s)	928
AcsI	RAATTY	4 cut(s)	304, 346, 613, 725
AcuI	CTGAAG	1 cut(s)	645
AcyI	GRCGYC	1 cut(s)	203
AfaI	GTAC	4 cut(s)	128, 829, 973, 1737
AfiI	CCNNNNNNNGG	5 cut(s)	263, 575, 617, 1013, 1437
AgeI	ACCGGT	1 cut(s)	872
AgsI	TTSAA	6 cut(s)	277, 385, 575, 1034, 1175, 1589
AhlI	ACTAGT	1 cut(s)	1391
AjnI	CCWGG	1 cut(s)	891
AluBI	AGCT	8 cut(s)	133, 151, 357, 533, 560, 1000, 1266, 1494
AluI	AGCT	8 cut(s)	133, 151, 357, 533, 560, 1000, 1266, 1494
Alw21I	GWGCWC	4 cut(s)	228, 568, 1280, 1496
Alw26I	GTCTC	2 cut(s)	465, 553
Alw44I	GTGCAC	2 cut(s)	564, 1276
AlwI	GGATC	4 cut(s)	44, 1322, 1506, 1654
AlwNI	CAGNNNCTG	1 cut(s)	536
Ama87I	CYCGRG	2 cut(s)	160, 212
Aor13HI	TCCGGA	1 cut(s)	994
AoxI	GGCC	6 cut(s)	55, 87, 120, 190, 656, 928
ApaLI	GTGCAC	2 cut(s)	564, 1276
ApeKI	GCWGC	1 cut(s)	1499
ApoI	RAATTY	4 cut(s)	304, 346, 613, 725
AsiGI	ACCGGT	1 cut(s)	872
AspLEI	GCGC	1 cut(s)	1221
AspS9I	GGNCC	7 cut(s)	55, 120, 165, 267, 656, 1412, 1745
AsuC2I	CCSGG	7 cut(s)	54, 75, 86, 189, 221, 265, 1154
AsuHPI	GGTGA	6 cut(s)	52, 468, 590, 830, 1514, 1553
AvaI	CYCGRG	2 cut(s)	160, 212
AvaII	GGWCC	4 cut(s)	165, 267, 1412, 1745
BaeGI	GKGCMC	2 cut(s)	568, 1280
BanII	GRGCYC	1 cut(s)	1496
BauI	CACGAG	1 cut(s)	1161
Bbv12I	GWGCWC	4 cut(s)	228, 568, 1280, 1496
BbvI	GCAGC	1 cut(s)	1486
BccI	CCATC	6 cut(s)	78, 493, 671, 1016, 1102, 1199
BciT130I	CCWGG	1 cut(s)	893
BciVI	GTATCC	1 cut(s)	1202
BclI	TGATCA	2 cut(s)	640, 835
BcnI	CCSGG	7 cut(s)	54, 75, 86, 189, 221, 265, 1154
BcoDI	GTCTC	2 cut(s)	465, 553
BcuI	ACTAGT	1 cut(s)	1391
BfaI	CTAG	9 cut(s)	378, 561, 855, 948, 1056, 1392, 1544, 1566, 1650
BfuAI	ACCTGC	1 cut(s)	1533
BfuI	GTATCC	1 cut(s)	1202
BglII	AGATCT	1 cut(s)	902
BisI	GCNGC	1 cut(s)	1500
BlsI	GCNGC	1 cut(s)	1501
BmcAI	AGTACT	1 cut(s)	1737
Bme1390I	CCNGG	8 cut(s)	54, 75, 86, 189, 221, 265, 893, 1154
Bme18I	GGWCC	4 cut(s)	165, 267, 1412, 1745
BmeT110I	CYCGRG	2 cut(s)	160, 212
BmgT120I	GGNCC	7 cut(s)	55, 120, 165, 267, 656, 1412, 1745
BmiI	GGNNCC	7 cut(s)	79, 121, 167, 268, 508, 1158, 1413
BmrFI	CCNGG	8 cut(s)	54, 75, 86, 189, 221, 265, 893, 1154
BmsI	GCATC	4 cut(s)	571, 1280, 1328, 1686
Bpu10I	CCTNAGC	1 cut(s)	843
BpuMI	CCSGG	7 cut(s)	54, 75, 86, 189, 221, 265, 1154
BsaAI	YACGTR	1 cut(s)	1673
BsaHI	GRCGYC	1 cut(s)	203
BsaI	GGTCTC	1 cut(s)	553
BsaJI	CCNNGG	4 cut(s)	219, 324, 439, 1259
BsaWI	WCCGGW	3 cut(s)	16, 872, 994
BsaXI	ACNNNNNCTCC	4 cut(s)	169, 199, 1585, 1615
Bsc4I	CCNNNNNNNGG	5 cut(s)	263, 575, 617, 1013, 1437
Bse118I	RCCGGY	2 cut(s)	142, 872
Bse1I	ACTGG	4 cut(s)	692, 931, 1045, 1136
Bse3DI	GCAATG	1 cut(s)	424
BseAI	TCCGGA	1 cut(s)	994
BseBI	CCWGG	1 cut(s)	893
BseDI	CCNNGG	4 cut(s)	219, 324, 439, 1259
BseGI	GGATG	8 cut(s)	70, 592, 754, 1113, 1117, 1207, 1295, 1319
BseLI	CCNNNNNNNGG	5 cut(s)	263, 575, 617, 1013, 1437
BseMI	GCAATG	1 cut(s)	424
BseMII	CTCAG	1 cut(s)	1172
BseNI	ACTGG	4 cut(s)	692, 931, 1045, 1136
BseRI	GAGGAG	3 cut(s)	218, 499, 1117
BseSI	GKGCMC	2 cut(s)	568, 1280
BseXI	GCAGC	1 cut(s)	1486
Bsh1285I	CGRYCG	1 cut(s)	12
BshFI	GGCC	6 cut(s)	57, 89, 122, 192, 658, 930
BshTI	ACCGGT	1 cut(s)	872
BsiEI	CGRYCG	1 cut(s)	12
BsiHKAI	GWGCWC	4 cut(s)	228, 568, 1280, 1496
BsiHKCI	CYCGRG	2 cut(s)	160, 212
BslFI	GGGAC	6 cut(s)	151, 202, 310, 813, 1361, 1425
BslI	CCNNNNNNNGG	5 cut(s)	263, 575, 617, 1013, 1437
BsmAI	GTCTC	2 cut(s)	465, 553
BsmFI	GGGAC	6 cut(s)	151, 202, 310, 813, 1361, 1425
BsmI	GAATGC	2 cut(s)	26, 1432
BsnI	GGCC	6 cut(s)	57, 89, 122, 192, 658, 930
Bso31I	GGTCTC	1 cut(s)	553
BsoBI	CYCGRG	2 cut(s)	160, 212
Bsp1286I	GDGCHC	4 cut(s)	228, 568, 1280, 1496
Bsp13I	TCCGGA	1 cut(s)	994
Bsp19I	CCATGG	1 cut(s)	324
BspACI	CCGC	6 cut(s)	12, 111, 584, 1213, 1286, 1383
BspANI	GGCC	6 cut(s)	57, 89, 122, 192, 658, 930
BspCNI	CTCAG	1 cut(s)	1173
BspEI	TCCGGA	1 cut(s)	994
BspHI	TCATGA	2 cut(s)	793, 1369
BspLI	GGNNCC	7 cut(s)	79, 121, 167, 268, 508, 1158, 1413
BspMI	ACCTGC	1 cut(s)	1533
BspPI	GGATC	4 cut(s)	44, 1322, 1506, 1654
BspTNI	GGTCTC	1 cut(s)	553
BsrDI	GCAATG	1 cut(s)	424
BsrFI	RCCGGY	2 cut(s)	142, 872
BsrI	ACTGG	4 cut(s)	692, 931, 1045, 1136
BssAI	RCCGGY	2 cut(s)	142, 872
BssECI	CCNNGG	4 cut(s)	219, 324, 439, 1259
BssNI	GRCGYC	1 cut(s)	203
BssSI	CACGAG	1 cut(s)	1161
BssT1I	CCWWGG	3 cut(s)	324, 439, 1259
Bst2BI	CACGAG	1 cut(s)	1161
Bst2UI	CCWGG	1 cut(s)	893
Bst4CI	ACNGT	4 cut(s)	636, 764, 780, 1423
Bst6I	CTCTTC	2 cut(s)	891, 1726
BstACI	GRCGYC	1 cut(s)	203
BstAPI	GCANNNNNTGC	1 cut(s)	430
BstBAI	YACGTR	1 cut(s)	1673
BstC8I	GCNNGC	4 cut(s)	144, 426, 505, 1217
BstDEI	CTNAG	2 cut(s)	843, 1181
BstDSI	CCRYGG	1 cut(s)	324
BstENI	CCTNNNNNAGG	2 cut(s)	573, 1011
BstF5I	GGATG	8 cut(s)	70, 592, 754, 1113, 1117, 1207, 1295, 1319
BstHHI	GCGC	1 cut(s)	1221
BstMAI	GTCTC	2 cut(s)	465, 553
BstMCI	CGRYCG	1 cut(s)	12
BstMWI	GCNNNNNNNGC	3 cut(s)	139, 148, 430
BstNI	CCWGG	1 cut(s)	893
BstNSI	RCATGY	2 cut(s)	713, 1310
BstSCI	CCNGG	8 cut(s)	52, 73, 84, 187, 219, 263, 891, 1152
BstSLI	GKGCMC	2 cut(s)	568, 1280
BstV1I	GCAGC	1 cut(s)	1486
BstX2I	RGATCY	3 cut(s)	902, 1511, 1646
BstYI	RGATCY	3 cut(s)	902, 1511, 1646
BsuI	GTATCC	1 cut(s)	1202
BsuRI	GGCC	6 cut(s)	57, 89, 122, 192, 658, 930
BtgI	CCRYGG	1 cut(s)	324
BtsCI	GGATG	8 cut(s)	70, 592, 754, 1113, 1117, 1207, 1295, 1319
BveI	ACCTGC	1 cut(s)	1533
Cac8I	GCNNGC	4 cut(s)	144, 426, 505, 1217
CaiI	CAGNNNCTG	1 cut(s)	536
CciI	TCATGA	2 cut(s)	793, 1369
CfoI	GCGC	1 cut(s)	1221
Cfr10I	RCCGGY	2 cut(s)	142, 872
Cfr13I	GGNCC	7 cut(s)	55, 120, 165, 267, 656, 1412, 1745
CseI	GACGC	1 cut(s)	462
Csp6I	GTAC	4 cut(s)	127, 828, 972, 1736
CspAI	ACCGGT	1 cut(s)	872
CviQI	GTAC	4 cut(s)	127, 828, 972, 1736
DdeI	CTNAG	2 cut(s)	843, 1181
DraI	TTTAAA	2 cut(s)	1623, 1695
EaeI	YGGCCR	1 cut(s)	928
Eam1104I	CTCTTC	2 cut(s)	891, 1726
EarI	CTCTTC	2 cut(s)	891, 1726
Ecl136II	GAGCTC	1 cut(s)	1494
Eco130I	CCWWGG	3 cut(s)	324, 439, 1259
Eco24I	GRGCYC	1 cut(s)	1496
Eco31I	GGTCTC	1 cut(s)	553
Eco47I	GGWCC	4 cut(s)	165, 267, 1412, 1745
Eco53kI	GAGCTC	1 cut(s)	1494
Eco57I	CTGAAG	1 cut(s)	645
Eco88I	CYCGRG	2 cut(s)	160, 212
EcoICRI	GAGCTC	1 cut(s)	1494
EcoNI	CCTNNNNNAGG	2 cut(s)	573, 1011
EcoO109I	RGGNCCY	2 cut(s)	165, 267
EcoRI	GAATTC	1 cut(s)	304
EcoRII	CCWGG	1 cut(s)	891
EcoT14I	CCWWGG	3 cut(s)	324, 439, 1259
EcoT38I	GRGCYC	1 cut(s)	1496
ErhI	CCWWGG	3 cut(s)	324, 439, 1259
FalI	AAGNNNNNCTT	2 cut(s)	643, 675
FaqI	GGGAC	6 cut(s)	151, 202, 310, 813, 1361, 1425
FauI	CCCGC	1 cut(s)	1279
FauNDI	CATATG	2 cut(s)	543, 1351
FbaI	TGATCA	2 cut(s)	640, 835
FblI	GTMKAC	1 cut(s)	859
Fnu4HI	GCNGC	1 cut(s)	1500
FokI	GGATG	8 cut(s)	57, 599, 741, 1120, 1124, 1214, 1302, 1306
FriOI	GRGCYC	1 cut(s)	1496
Fsp4HI	GCNGC	1 cut(s)	1500
FspBI	CTAG	9 cut(s)	378, 561, 855, 948, 1056, 1392, 1544, 1566, 1650
GlaI	GCGC	1 cut(s)	1220
GluI	GCNGC	1 cut(s)	1500
HaeIII	GGCC	6 cut(s)	57, 89, 122, 192, 658, 930
HgaI	GACGC	1 cut(s)	462
HhaI	GCGC	1 cut(s)	1221
Hin1I	GRCGYC	1 cut(s)	203
Hin6I	GCGC	1 cut(s)	1219
HinP1I	GCGC	1 cut(s)	1219
HincII	GTYRAC	1 cut(s)	860
HindII	GTYRAC	1 cut(s)	860
HindIII	AAGCTT	1 cut(s)	355
HinfI	GANTC	6 cut(s)	5, 215, 277, 1636, 1667, 1684
HphI	GGTGA	6 cut(s)	52, 468, 590, 830, 1514, 1553
Hpy166II	GTNNAC	4 cut(s)	566, 830, 860, 1278
Hpy8I	GTNNAC	4 cut(s)	566, 830, 860, 1278
Hpy99I	CGWCG	4 cut(s)	44, 205, 208, 864
HpyAV	CCTTC	7 cut(s)	100, 235, 261, 569, 669, 1028, 1443
HpyCH4III	ACNGT	4 cut(s)	636, 764, 780, 1423
HpyCH4IV	ACGT	2 cut(s)	203, 1672
HpyCH4V	TGCA	5 cut(s)	433, 566, 750, 1278, 1534
HpyF10VI	GCNNNNNNNGC	3 cut(s)	139, 148, 430
HpyF3I	CTNAG	2 cut(s)	843, 1181
HpySE526I	ACGT	2 cut(s)	203, 1672
Hsp92I	GRCGYC	1 cut(s)	203
HspAI	GCGC	1 cut(s)	1219
Kpn2I	TCCGGA	1 cut(s)	994
KroI	GCCGGC	1 cut(s)	142
KroNI	GCCGGC	1 cut(s)	144
Ksp22I	TGATCA	2 cut(s)	640, 835
LmnI	GCTCC	9 cut(s)	83, 156, 231, 512, 538, 557, 997, 1263, 1606
Lsp1109I	GCAGC	1 cut(s)	1486
LweI	GCATC	4 cut(s)	571, 1280, 1328, 1686
MaeI	CTAG	9 cut(s)	378, 561, 855, 948, 1056, 1392, 1544, 1566, 1650
MaeII	ACGT	2 cut(s)	203, 1672
MaeIII	GTNAC	3 cut(s)	391, 474, 1129
MboII	GAAGA	5 cut(s)	660, 784, 908, 1695, 1743
MflI	RGATCY	3 cut(s)	902, 1511, 1646
MhlI	GDGCHC	4 cut(s)	228, 568, 1280, 1496
MluCI	AATT	6 cut(s)	304, 346, 613, 725, 1122, 1573
MlyI	GAGTC	1 cut(s)	224
MmeI	TCCRAC	7 cut(s)	63, 105, 224, 258, 281, 1465, 1539
MreI	CGCCGGCG	1 cut(s)	142
MroI	TCCGGA	1 cut(s)	994
MroNI	GCCGGC	1 cut(s)	142
MseI	TTAA	7 cut(s)	366, 489, 714, 1143, 1578, 1622, 1694
MslI	CAYNNNNRTG	2 cut(s)	19, 1368
MspA1I	CMGCKG	2 cut(s)	111, 1215
MspR9I	CCNGG	8 cut(s)	54, 75, 86, 189, 221, 265, 893, 1154
Mva1269I	GAATGC	2 cut(s)	26, 1432
MvaI	CCWGG	1 cut(s)	893
MwoI	GCNNNNNNNGC	3 cut(s)	139, 148, 430
NaeI	GCCGGC	1 cut(s)	144
NciI	CCSGG	7 cut(s)	54, 75, 86, 189, 221, 265, 1154
NcoI	CCATGG	1 cut(s)	324
NdeI	CATATG	2 cut(s)	543, 1351
NgoMIV	GCCGGC	1 cut(s)	142
NlaIV	GGNNCC	7 cut(s)	79, 121, 167, 268, 508, 1158, 1413
NmeAIII	GCCGAG	1 cut(s)	956
NmuCI	GTSAC	1 cut(s)	474
NspI	RCATGY	2 cut(s)	713, 1310
PaeR7I	CTCGAG	2 cut(s)	160, 212
PagI	TCATGA	2 cut(s)	793, 1369
PaqCI	CACCTGC	1 cut(s)	1533
PctI	GAATGC	2 cut(s)	26, 1432
PdiI	GCCGGC	1 cut(s)	144
PfeI	GAWTC	4 cut(s)	277, 1636, 1667, 1684
PflMI	CCANNNNNTGG	1 cut(s)	617
PfoI	TCCNGGA	2 cut(s)	891, 1152
PinAI	ACCGGT	1 cut(s)	872
PkrI	GCNGC	1 cut(s)	1501
PleI	GAGTC	1 cut(s)	223
PpsI	GAGTC	1 cut(s)	223
Ppu21I	YACGTR	1 cut(s)	1673
PpuMI	RGGWCCY	2 cut(s)	165, 267
PsiI	TTATAA	1 cut(s)	1343
Psp124BI	GAGCTC	1 cut(s)	1496
Psp5II	RGGWCCY	2 cut(s)	165, 267
Psp6I	CCWGG	1 cut(s)	891
PspGI	CCWGG	1 cut(s)	891
PspN4I	GGNNCC	7 cut(s)	79, 121, 167, 268, 508, 1158, 1413
PspPI	GGNCC	7 cut(s)	55, 120, 165, 267, 656, 1412, 1745
PspPPI	RGGWCCY	2 cut(s)	165, 267
PstNI	CAGNNNCTG	1 cut(s)	536
PsuI	RGATCY	3 cut(s)	902, 1511, 1646
RsaI	GTAC	4 cut(s)	128, 829, 973, 1737
RsaNI	GTAC	4 cut(s)	127, 828, 972, 1736
RseI	CAYNNNNRTG	2 cut(s)	19, 1368
SacI	GAGCTC	1 cut(s)	1496
SalI	GTCGAC	1 cut(s)	858
SaqAI	TTAA	7 cut(s)	366, 489, 714, 1143, 1578, 1622, 1694
SatI	GCNGC	1 cut(s)	1500
Sau96I	GGNCC	7 cut(s)	55, 120, 165, 267, 656, 1412, 1745
ScaI	AGTACT	1 cut(s)	1737
SchI	GAGTC	1 cut(s)	224
ScrFI	CCNGG	8 cut(s)	54, 75, 86, 189, 221, 265, 893, 1154
SduI	GDGCHC	4 cut(s)	228, 568, 1280, 1496
SfaNI	GCATC	4 cut(s)	571, 1280, 1328, 1686
Sfr274I	CTCGAG	2 cut(s)	160, 212
SgrAI	CRCCGGYG	1 cut(s)	142
SinI	GGWCC	4 cut(s)	165, 267, 1412, 1745
SlaI	CTCGAG	2 cut(s)	160, 212
SmiMI	CAYNNNNRTG	2 cut(s)	19, 1368
SmlI	CTYRAG	2 cut(s)	160, 212
SmoI	CTYRAG	2 cut(s)	160, 212
SpeI	ACTAGT	1 cut(s)	1391
Sse9I	AATT	6 cut(s)	304, 346, 613, 725, 1122, 1573
SsiI	CCGC	6 cut(s)	12, 111, 584, 1213, 1286, 1383
SspMI	CTAG	9 cut(s)	378, 561, 855, 948, 1056, 1392, 1544, 1566, 1650
SstI	GAGCTC	1 cut(s)	1496
StyD4I	CCNGG	8 cut(s)	52, 73, 84, 187, 219, 263, 891, 1152
StyI	CCWWGG	3 cut(s)	324, 439, 1259
TaaI	ACNGT	4 cut(s)	636, 764, 780, 1423
TaiI	ACGT	2 cut(s)	206, 1675
TaqI	TCGA	8 cut(s)	8, 48, 161, 213, 859, 1065, 1436, 1680
TasI	AATT	6 cut(s)	304, 346, 613, 725, 1122, 1573
TatI	WGTACW	2 cut(s)	126, 1735
TfiI	GAWTC	4 cut(s)	277, 1636, 1667, 1684
Tru1I	TTAA	7 cut(s)	366, 489, 714, 1143, 1578, 1622, 1694
Tru9I	TTAA	7 cut(s)	366, 489, 714, 1143, 1578, 1622, 1694
TseFI	GTSAC	1 cut(s)	474
TseI	GCWGC	1 cut(s)	1499
Tsp45I	GTSAC	1 cut(s)	474
TspDTI	ATGAA	5 cut(s)	254, 354, 530, 899, 1649
TspGWI	ACGGA	2 cut(s)	413, 1593
Van91I	CCANNNNNTGG	1 cut(s)	617
VneI	GTGCAC	2 cut(s)	564, 1276
VpaK11BI	GGWCC	4 cut(s)	165, 267, 1412, 1745
XagI	CCTNNNNNAGG	2 cut(s)	573, 1011
XapI	RAATTY	4 cut(s)	304, 346, 613, 725
XbaI	TCTAGA	2 cut(s)	377, 1649
XceI	RCATGY	2 cut(s)	713, 1310
XhoI	CTCGAG	2 cut(s)	160, 212
XmiI	GTMKAC	1 cut(s)	859
XspI	CTAG	9 cut(s)	378, 561, 855, 948, 1056, 1392, 1544, 1566, 1650
ZraI	GACGTC	1 cut(s)	204
ZrmI	AGTACT	1 cut(s)	1737

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.