Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0004158

Physical Location & Seq

Genomic Coordinates Forward (+)

37288058 .. 37292654

Gene Structure 4597 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000034142

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1776 bp

ATGGACTCGACCGCACCGGAATGCCCCCCGCCTCCCTCCGACGAACTCGATCCGGGCCTCACCGACTTCCATCCCGGCTCCGACCCGGCCTTCTCCACTTCCCGTTCCGGCGGTGGGGCCAAGTACAAGCTCATGTCGCCGGCGAAGCTCCCGATCTCGAGGTCCCCCTGCCTCACTATCCCTCCCGGCCTCACTCCGTCGTCGTTTCTCGAGTCCCCGGTGCTCCTCTCCAACATGAAGGCAGAACCTTCTCCAACTACCGGGTCCTTTTTGAATCCTAAAATGGTCTATGGGACTGCGAATTCTACATATTCAGCTACCATGGTTTGCTCAGATGAAAGAAATTCTGGAAGCTTTGAGTTTAAGCCCCATTCTAGATTGAATATGGTTACCACGGATTATGACAACCACAGCAATGAGCAGGCTGTGCAAGTCCAAGGTCAAGGTCAAGGTCAAGGTCAGGGTCAGGGTCAGGGTCAGGTCCAGTCTCAATCACTTGTGTCACCACCTTTGGTTAAGAATGAGATGGCAGGCTCCTCAAATCAATCGGGATTACCAGCTCCTGTTCATATGGTCTCGTCAGGAGCTAATGCACCTGTTGAAGGTGATGATGATATAAGTCAGAGGGGAAATCCAAATTCTGGTGTCCAAACATCACAGTTTGATCATAAAGGAAGTGGACCTTCAGTATCTTCTGATGATGGCTATAACTGGCGAAAATATGGACAAAAACATGTTAAAGGAAGTGAATTTCCTCGCAGTTATTACAAATGCACACATCCCAACTGTGAAGTGAAGAAACTGTTTGAGCGATCTCATGAGGGACATATAACAGAGATTATCTACAAGGGTACACATGATCACCCTAAGCCTCAACCTAGTCGACGATATAATACTGGAGCTATGATCAATGTCCAGGAAGAAAAATCCGACAAGGCTTTATCTTTGACTGGCCGAGATGACAAGTCATCCAGTATGTATGGGCACATGTCTAGTACCAATGAGCCAAATAGTACTCCTGAGCTATCCCCTGTCAGAGGAAATGATGGTAGTGTTGAAGGAACAGGCTCACTAGCAACTAGAATACTCGATGAGGTCGATGATGATGACCCATTCTCTAAAAGGAGGAGGATGGATGTTGGTGGAATTGATGTTACACCAGTTGTTAAGCCTATCCGGGAACCACGAGTTGTTGTTCAAACTCTGAGTGAGGTTGATATATTGGATGATGGATACCGCTGGCGCAAATATGGTCAGAAAGTTGTGAGGGGAAATCCTAATCCAAGGAGCTATTACAAGTGCACAAATGCTGGATGCCCTGTTAGGAAGCATGTGGAGAGGGCATCCCATGATCCAAAAGCAGTTATAACTACATATGAGGGAAAACATAATCATGATGTCCCAACTGCAAGGACCAGTAGCCATGACACTTCAGGGCCAACAACCGTGAATGCCCCTTCGAGGATTAGAACAGAGGAAAATGACACCATAAGCCTTGATCTTGGTGTTGGAATGAGCTCTGCTGCTGAAAATAGATCCAACAATCACCTGCGATTGCACTCTGAACTAGCAGAAAGACAAACTCACCCTAGTTCCAGTTTTAAGGCTGTTCAAACTACCCCTGCTCCGTCATACTACGGTGTTTTAAATAGTGGCATGAATCAGTATGGATCTAGAGAAAATCCAAGTGAATCACGTAGCATCGAGATTCCACCTTTAAACCATTCTTCTTACCCATATCCACAGAACATGGGAAGAGTACTAACAGGTCCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0006950 GO:0008150 GO:0009611 GO:0009889 GO:0009891 GO:0009893 GO:0009961 GO:0010033 GO:0010243 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0042221 GO:0043200 GO:0043565 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1901698 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WRKY

Protein Analysis

592

Amino Acids

64.22

Weight (kDa)

6.5

Isoelectric Point (pI)

53.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WRKY	PF03106	233 - 289	4.3e-25	WRKY DNA -binding domain
WRKY	PF03106	409 - 466	1.2e-26	WRKY DNA -binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004158)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26640 AT4G26640 AT4G26640 AT4G26640 AT4G26640 AT4G26640 AT4G26640
fragaria_vesca	FvH4_3g24010 FvH4_3g24010
malus_domestica	MD03G1188900.v1.1 MD11G1205000.v1.1
prunus_persica	Prupe.4G232600_v2.0.a1 Prupe.4G232600_v2.0.a1 Prupe.4G232600_v2.0.a1
pyrus_communis	pycom03g14170 pycom11g17770
rosa_chinensis	RchiOBHm_Chr5g0042581 RchiOBHm_Chr5g0042601
rosa_laevigata	RLG00000034142
rosa_multiflora	Rmu_sc0004704.1_g000005 Rmu_sc0004704.1_g000010 Rmu_sc0012301.1_g000004 Rmu_sc0012301.1_g000009
rosa_roxburghii	Rroxscaffold_1G00038060
rosa_rugosa	Rorug05G0202900 Rorug05G0203000 Rorug05G0203100
rosa_samantha	Rh5AG287900 Rh5AG288300 Rh5BG292300 Rh5CG324700 Rh5DG302100
rosa_wichuraiana	Rw5G026730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1367
AarI	CACCTGC	1 cut(s)	1557
Acc36I	ACCTGC	1 cut(s)	1557
AccB7I	CCANNNNNTGG	1 cut(s)	641
AccI	GTMKAC	1 cut(s)	883
AciI	CCGC	4 cut(s)	12, 29, 111, 1237
AclWI	GGATC	4 cut(s)	44, 1346, 1530, 1678
AcoI	YGGCCR	1 cut(s)	952
AcsI	RAATTY	4 cut(s)	301, 343, 637, 749
AcuI	CTGAAG	2 cut(s)	669, 1416
AfaI	GTAC	5 cut(s)	125, 853, 997, 1015, 1761
AfiI	CCNNNNNNNGG	6 cut(s)	114, 260, 602, 641, 1037, 1461
AflIII	ACRYGT	2 cut(s)	733, 987
AgsI	TTSAA	6 cut(s)	274, 382, 602, 1058, 1199, 1613
AjnI	CCWGG	1 cut(s)	915
Alw21I	GWGCWC	3 cut(s)	225, 1304, 1520
Alw26I	GTCTC	2 cut(s)	492, 580
Alw44I	GTGCAC	1 cut(s)	1300
AlwI	GGATC	4 cut(s)	44, 1346, 1530, 1678
AlwNI	CAGNNNCTG	1 cut(s)	563
Ama87I	CYCGRG	2 cut(s)	157, 209
AoxI	GGCC	6 cut(s)	55, 87, 117, 187, 952, 1436
ApaLI	GTGCAC	1 cut(s)	1300
ApeKI	GCWGC	1 cut(s)	1523
ApoI	RAATTY	4 cut(s)	301, 343, 637, 749
AspLEI	GCGC	1 cut(s)	1245
AspS9I	GGNCC	9 cut(s)	55, 117, 162, 264, 481, 680, 1413, 1436, 1769
AsuC2I	CCSGG	7 cut(s)	54, 75, 86, 186, 218, 262, 1178
AsuHPI	GGTGA	6 cut(s)	52, 495, 617, 854, 1538, 1577
AvaI	CYCGRG	2 cut(s)	157, 209
AvaII	GGWCC	6 cut(s)	162, 264, 481, 680, 1413, 1769
BaeGI	GKGCMC	2 cut(s)	987, 1304
BanII	GRGCYC	1 cut(s)	1520
BauI	CACGAG	1 cut(s)	1185
Bbv12I	GWGCWC	3 cut(s)	225, 1304, 1520
BbvI	GCAGC	1 cut(s)	1510
BccI	CCATC	6 cut(s)	78, 520, 695, 1040, 1126, 1223
BciT130I	CCWGG	1 cut(s)	917
BciVI	GTATCC	1 cut(s)	1226
BclI	TGATCA	3 cut(s)	664, 859, 906
BcnI	CCSGG	7 cut(s)	54, 75, 86, 186, 218, 262, 1178
BcoDI	GTCTC	2 cut(s)	492, 580
BfaI	CTAG	8 cut(s)	375, 879, 993, 1073, 1080, 1568, 1590, 1674
BfuAI	ACCTGC	1 cut(s)	1557
BfuI	GTATCC	1 cut(s)	1226
BisI	GCNGC	1 cut(s)	1524
BlsI	GCNGC	1 cut(s)	1525
BmcAI	AGTACT	2 cut(s)	1015, 1761
Bme1390I	CCNGG	8 cut(s)	54, 75, 86, 186, 218, 262, 917, 1178
Bme18I	GGWCC	6 cut(s)	162, 264, 481, 680, 1413, 1769
BmeT110I	CYCGRG	2 cut(s)	157, 209
BmgT120I	GGNCC	9 cut(s)	55, 117, 162, 264, 481, 680, 1413, 1436, 1769
BmiI	GGNNCC	6 cut(s)	79, 118, 164, 265, 535, 1182
BmrFI	CCNGG	8 cut(s)	54, 75, 86, 186, 218, 262, 917, 1178
BmsI	GCATC	3 cut(s)	1304, 1352, 1710
BpmI	CTGGAG	1 cut(s)	918
Bpu10I	CCTNAGC	2 cut(s)	867, 1020
BpuMI	CCSGG	7 cut(s)	54, 75, 86, 186, 218, 262, 1178
BsaAI	YACGTR	1 cut(s)	1697
BsaI	GGTCTC	1 cut(s)	580
BsaJI	CCNNGG	5 cut(s)	216, 321, 393, 436, 1283
BsaWI	WCCGGW	1 cut(s)	16
BsaXI	ACNNNNNCTCC	4 cut(s)	166, 196, 1609, 1639
Bsc4I	CCNNNNNNNGG	6 cut(s)	114, 260, 602, 641, 1037, 1461
Bse118I	RCCGGY	1 cut(s)	139
Bse1I	ACTGG	8 cut(s)	484, 716, 901, 955, 972, 1160, 1416, 1596
Bse3DI	GCAATG	1 cut(s)	421
BseBI	CCWGG	1 cut(s)	917
BseDI	CCNNGG	5 cut(s)	216, 321, 393, 436, 1283
BseGI	GGATG	8 cut(s)	70, 778, 968, 1137, 1141, 1231, 1319, 1343
BseLI	CCNNNNNNNGG	6 cut(s)	114, 260, 602, 641, 1037, 1461
BseMI	GCAATG	1 cut(s)	421
BseMII	CTCAG	3 cut(s)	345, 1011, 1196
BseNI	ACTGG	8 cut(s)	484, 716, 901, 955, 972, 1160, 1416, 1596
BseRI	GAGGAG	3 cut(s)	215, 526, 1141
BseSI	GKGCMC	2 cut(s)	987, 1304
BseXI	GCAGC	1 cut(s)	1510
Bsh1285I	CGRYCG	1 cut(s)	12
BshFI	GGCC	6 cut(s)	57, 89, 119, 189, 954, 1438
BsiEI	CGRYCG	1 cut(s)	12
BsiHKAI	GWGCWC	3 cut(s)	225, 1304, 1520
BsiHKCI	CYCGRG	2 cut(s)	157, 209
BslFI	GGGAC	5 cut(s)	148, 199, 307, 837, 1385
BslI	CCNNNNNNNGG	6 cut(s)	114, 260, 602, 641, 1037, 1461
BsmAI	GTCTC	2 cut(s)	492, 580
BsmFI	GGGAC	5 cut(s)	148, 199, 307, 837, 1385
BsmI	GAATGC	2 cut(s)	26, 1456
BsnI	GGCC	6 cut(s)	57, 89, 119, 189, 954, 1438
Bso31I	GGTCTC	1 cut(s)	580
BsoBI	CYCGRG	2 cut(s)	157, 209
Bsp1286I	GDGCHC	4 cut(s)	225, 987, 1304, 1520
Bsp19I	CCATGG	1 cut(s)	321
BspACI	CCGC	4 cut(s)	12, 29, 111, 1237
BspANI	GGCC	6 cut(s)	57, 89, 119, 189, 954, 1438
BspCNI	CTCAG	3 cut(s)	344, 1012, 1197
BspHI	TCATGA	2 cut(s)	817, 1393
BspLI	GGNNCC	6 cut(s)	79, 118, 164, 265, 535, 1182
BspMI	ACCTGC	1 cut(s)	1557
BspPI	GGATC	4 cut(s)	44, 1346, 1530, 1678
BspTNI	GGTCTC	1 cut(s)	580
BsrDI	GCAATG	1 cut(s)	421
BsrFI	RCCGGY	1 cut(s)	139
BsrI	ACTGG	8 cut(s)	484, 716, 901, 955, 972, 1160, 1416, 1596
BssAI	RCCGGY	1 cut(s)	139
BssECI	CCNNGG	5 cut(s)	216, 321, 393, 436, 1283
BssSI	CACGAG	1 cut(s)	1185
BssT1I	CCWWGG	3 cut(s)	321, 436, 1283
Bst2BI	CACGAG	1 cut(s)	1185
Bst2UI	CCWGG	1 cut(s)	917
Bst4CI	ACNGT	5 cut(s)	660, 788, 804, 1447, 1640
Bst6I	CTCTTC	1 cut(s)	1750
BstAPI	GCANNNNNTGC	1 cut(s)	427
BstBAI	YACGTR	1 cut(s)	1697
BstC8I	GCNNGC	4 cut(s)	141, 423, 532, 1241
BstDEI	CTNAG	4 cut(s)	331, 867, 1020, 1205
BstDSI	CCRYGG	2 cut(s)	321, 393
BstEII	GGTNACC	1 cut(s)	388
BstENI	CCTNNNNNAGG	2 cut(s)	600, 1035
BstF5I	GGATG	8 cut(s)	70, 778, 968, 1137, 1141, 1231, 1319, 1343
BstHHI	GCGC	1 cut(s)	1245
BstMAI	GTCTC	2 cut(s)	492, 580
BstMCI	CGRYCG	1 cut(s)	12
BstMWI	GCNNNNNNNGC	3 cut(s)	136, 145, 427
BstNI	CCWGG	1 cut(s)	917
BstNSI	RCATGY	3 cut(s)	737, 991, 1334
BstPI	GGTNACC	1 cut(s)	388
BstSCI	CCNGG	8 cut(s)	52, 73, 84, 184, 216, 260, 915, 1176
BstSLI	GKGCMC	2 cut(s)	987, 1304
BstV1I	GCAGC	1 cut(s)	1510
BstX2I	RGATCY	2 cut(s)	1535, 1670
BstYI	RGATCY	2 cut(s)	1535, 1670
BsuI	GTATCC	1 cut(s)	1226
BsuRI	GGCC	6 cut(s)	57, 89, 119, 189, 954, 1438
BtgI	CCRYGG	2 cut(s)	321, 393
BtsCI	GGATG	8 cut(s)	70, 778, 968, 1137, 1141, 1231, 1319, 1343
BveI	ACCTGC	1 cut(s)	1557
Cac8I	GCNNGC	4 cut(s)	141, 423, 532, 1241
CaiI	CAGNNNCTG	1 cut(s)	563
CciI	TCATGA	2 cut(s)	817, 1393
CfoI	GCGC	1 cut(s)	1245
Cfr10I	RCCGGY	1 cut(s)	139
Cfr13I	GGNCC	9 cut(s)	55, 117, 162, 264, 481, 680, 1413, 1436, 1769
Csp6I	GTAC	5 cut(s)	124, 852, 996, 1014, 1760
CviQI	GTAC	5 cut(s)	124, 852, 996, 1014, 1760
DdeI	CTNAG	4 cut(s)	331, 867, 1020, 1205
DraI	TTTAAA	2 cut(s)	1647, 1719
EaeI	YGGCCR	1 cut(s)	952
Eam1104I	CTCTTC	1 cut(s)	1750
EarI	CTCTTC	1 cut(s)	1750
Ecl136II	GAGCTC	1 cut(s)	1518
Eco130I	CCWWGG	3 cut(s)	321, 436, 1283
Eco24I	GRGCYC	1 cut(s)	1520
Eco31I	GGTCTC	1 cut(s)	580
Eco47I	GGWCC	6 cut(s)	162, 264, 481, 680, 1413, 1769
Eco53kI	GAGCTC	1 cut(s)	1518
Eco57I	CTGAAG	2 cut(s)	669, 1416
Eco88I	CYCGRG	2 cut(s)	157, 209
Eco91I	GGTNACC	1 cut(s)	388
EcoICRI	GAGCTC	1 cut(s)	1518
EcoNI	CCTNNNNNAGG	2 cut(s)	600, 1035
EcoO109I	RGGNCCY	2 cut(s)	162, 264
EcoO65I	GGTNACC	1 cut(s)	388
EcoRI	GAATTC	1 cut(s)	301
EcoRII	CCWGG	1 cut(s)	915
EcoT14I	CCWWGG	3 cut(s)	321, 436, 1283
EcoT38I	GRGCYC	1 cut(s)	1520
ErhI	CCWWGG	3 cut(s)	321, 436, 1283
FalI	AAGNNNNNCTT	2 cut(s)	667, 699
FaqI	GGGAC	5 cut(s)	148, 199, 307, 837, 1385
FauI	CCCGC	1 cut(s)	36
FauNDI	CATATG	2 cut(s)	570, 1375
FbaI	TGATCA	3 cut(s)	664, 859, 906
FblI	GTMKAC	1 cut(s)	883
Fnu4HI	GCNGC	1 cut(s)	1524
FokI	GGATG	8 cut(s)	57, 765, 955, 1144, 1148, 1238, 1326, 1330
FriOI	GRGCYC	1 cut(s)	1520
Fsp4HI	GCNGC	1 cut(s)	1524
FspBI	CTAG	8 cut(s)	375, 879, 993, 1073, 1080, 1568, 1590, 1674
GlaI	GCGC	1 cut(s)	1244
GluI	GCNGC	1 cut(s)	1524
GsuI	CTGGAG	1 cut(s)	918
HaeIII	GGCC	6 cut(s)	57, 89, 119, 189, 954, 1438
HhaI	GCGC	1 cut(s)	1245
Hin6I	GCGC	1 cut(s)	1243
HinP1I	GCGC	1 cut(s)	1243
HincII	GTYRAC	1 cut(s)	884
HindII	GTYRAC	1 cut(s)	884
HindIII	AAGCTT	1 cut(s)	352
HinfI	GANTC	6 cut(s)	5, 212, 274, 1660, 1691, 1708
HphI	GGTGA	6 cut(s)	52, 495, 617, 854, 1538, 1577
Hpy166II	GTNNAC	4 cut(s)	680, 854, 884, 1302
Hpy8I	GTNNAC	4 cut(s)	680, 854, 884, 1302
Hpy99I	CGWCG	4 cut(s)	44, 202, 205, 888
HpyAV	CCTTC	7 cut(s)	100, 232, 258, 596, 693, 1052, 1467
HpyCH4III	ACNGT	5 cut(s)	660, 788, 804, 1447, 1640
HpyCH4IV	ACGT	1 cut(s)	1696
HpyCH4V	TGCA	6 cut(s)	430, 593, 774, 1302, 1409, 1558
HpyF10VI	GCNNNNNNNGC	3 cut(s)	136, 145, 427
HpyF3I	CTNAG	4 cut(s)	331, 867, 1020, 1205
HpySE526I	ACGT	1 cut(s)	1696
HspAI	GCGC	1 cut(s)	1243
KroI	GCCGGC	1 cut(s)	139
KroNI	GCCGGC	1 cut(s)	141
Ksp22I	TGATCA	3 cut(s)	664, 859, 906
LmnI	GCTCC	9 cut(s)	83, 153, 228, 539, 565, 584, 899, 1287, 1630
Lsp1109I	GCAGC	1 cut(s)	1510
LweI	GCATC	3 cut(s)	1304, 1352, 1710
MaeI	CTAG	8 cut(s)	375, 879, 993, 1073, 1080, 1568, 1590, 1674
MaeII	ACGT	1 cut(s)	1696
MaeIII	GTNAC	3 cut(s)	388, 501, 1153
MboII	GAAGA	5 cut(s)	684, 808, 932, 1719, 1767
MflI	RGATCY	2 cut(s)	1535, 1670
MhlI	GDGCHC	4 cut(s)	225, 987, 1304, 1520
MluCI	AATT	5 cut(s)	301, 343, 637, 749, 1146
MlyI	GAGTC	1 cut(s)	221
MmeI	TCCRAC	7 cut(s)	63, 105, 255, 278, 954, 1489, 1563
MreI	CGCCGGCG	1 cut(s)	139
MroNI	GCCGGC	1 cut(s)	139
MseI	TTAA	7 cut(s)	363, 516, 738, 1167, 1602, 1646, 1718
MslI	CAYNNNNRTG	3 cut(s)	19, 414, 1392
MspA1I	CMGCKG	1 cut(s)	1239
MspR9I	CCNGG	8 cut(s)	54, 75, 86, 186, 218, 262, 917, 1178
Mva1269I	GAATGC	2 cut(s)	26, 1456
MvaI	CCWGG	1 cut(s)	917
MwoI	GCNNNNNNNGC	3 cut(s)	136, 145, 427
NaeI	GCCGGC	1 cut(s)	141
NciI	CCSGG	7 cut(s)	54, 75, 86, 186, 218, 262, 1178
NcoI	CCATGG	1 cut(s)	321
NdeI	CATATG	2 cut(s)	570, 1375
NgoMIV	GCCGGC	1 cut(s)	139
NlaIV	GGNNCC	6 cut(s)	79, 118, 164, 265, 535, 1182
NmeAIII	GCCGAG	1 cut(s)	980
NmuCI	GTSAC	1 cut(s)	501
NspI	RCATGY	3 cut(s)	737, 991, 1334
PaeR7I	CTCGAG	2 cut(s)	157, 209
PagI	TCATGA	2 cut(s)	817, 1393
PaqCI	CACCTGC	1 cut(s)	1557
PciI	ACATGT	2 cut(s)	733, 987
PcsI	WCGNNNNNNNCGW	1 cut(s)	1095
PctI	GAATGC	2 cut(s)	26, 1456
PdiI	GCCGGC	1 cut(s)	141
PfeI	GAWTC	4 cut(s)	274, 1660, 1691, 1708
PflMI	CCANNNNNTGG	1 cut(s)	641
PfoI	TCCNGGA	2 cut(s)	915, 1176
PkrI	GCNGC	1 cut(s)	1525
PleI	GAGTC	1 cut(s)	220
PpsI	GAGTC	1 cut(s)	220
Ppu21I	YACGTR	1 cut(s)	1697
PpuMI	RGGWCCY	2 cut(s)	162, 264
PscI	ACATGT	2 cut(s)	733, 987
PsiI	TTATAA	1 cut(s)	1367
Psp124BI	GAGCTC	1 cut(s)	1520
Psp5II	RGGWCCY	2 cut(s)	162, 264
Psp6I	CCWGG	1 cut(s)	915
PspEI	GGTNACC	1 cut(s)	388
PspGI	CCWGG	1 cut(s)	915
PspN4I	GGNNCC	6 cut(s)	79, 118, 164, 265, 535, 1182
PspPI	GGNCC	9 cut(s)	55, 117, 162, 264, 481, 680, 1413, 1436, 1769
PspPPI	RGGWCCY	2 cut(s)	162, 264
PstNI	CAGNNNCTG	1 cut(s)	563
PsuI	RGATCY	2 cut(s)	1535, 1670
RsaI	GTAC	5 cut(s)	125, 853, 997, 1015, 1761
RsaNI	GTAC	5 cut(s)	124, 852, 996, 1014, 1760
RseI	CAYNNNNRTG	3 cut(s)	19, 414, 1392
SacI	GAGCTC	1 cut(s)	1520
SalI	GTCGAC	1 cut(s)	882
SaqAI	TTAA	7 cut(s)	363, 516, 738, 1167, 1602, 1646, 1718
SatI	GCNGC	1 cut(s)	1524
Sau96I	GGNCC	9 cut(s)	55, 117, 162, 264, 481, 680, 1413, 1436, 1769
ScaI	AGTACT	2 cut(s)	1015, 1761
SchI	GAGTC	1 cut(s)	221
ScrFI	CCNGG	8 cut(s)	54, 75, 86, 186, 218, 262, 917, 1178
SduI	GDGCHC	4 cut(s)	225, 987, 1304, 1520
SfaNI	GCATC	3 cut(s)	1304, 1352, 1710
Sfr274I	CTCGAG	2 cut(s)	157, 209
SgrAI	CRCCGGYG	1 cut(s)	139
SinI	GGWCC	6 cut(s)	162, 264, 481, 680, 1413, 1769
SlaI	CTCGAG	2 cut(s)	157, 209
SmiMI	CAYNNNNRTG	3 cut(s)	19, 414, 1392
SmlI	CTYRAG	2 cut(s)	157, 209
SmoI	CTYRAG	2 cut(s)	157, 209
Sse9I	AATT	5 cut(s)	301, 343, 637, 749, 1146
SsiI	CCGC	4 cut(s)	12, 29, 111, 1237
SspMI	CTAG	8 cut(s)	375, 879, 993, 1073, 1080, 1568, 1590, 1674
SstI	GAGCTC	1 cut(s)	1520
StyD4I	CCNGG	8 cut(s)	52, 73, 84, 184, 216, 260, 915, 1176
StyI	CCWWGG	3 cut(s)	321, 436, 1283
TaaI	ACNGT	5 cut(s)	660, 788, 804, 1447, 1640
TaiI	ACGT	1 cut(s)	1699
TaqI	TCGA	9 cut(s)	8, 48, 158, 210, 883, 1089, 1098, 1460, 1704
TasI	AATT	5 cut(s)	301, 343, 637, 749, 1146
TatI	WGTACW	3 cut(s)	123, 1013, 1759
TfiI	GAWTC	4 cut(s)	274, 1660, 1691, 1708
Tru1I	TTAA	7 cut(s)	363, 516, 738, 1167, 1602, 1646, 1718
Tru9I	TTAA	7 cut(s)	363, 516, 738, 1167, 1602, 1646, 1718
TseFI	GTSAC	1 cut(s)	501
TseI	GCWGC	1 cut(s)	1523
Tsp45I	GTSAC	1 cut(s)	501
TspDTI	ATGAA	4 cut(s)	251, 351, 557, 1673
TspGWI	ACGGA	3 cut(s)	186, 410, 1617
Van91I	CCANNNNNTGG	1 cut(s)	641
VneI	GTGCAC	1 cut(s)	1300
VpaK11BI	GGWCC	6 cut(s)	162, 264, 481, 680, 1413, 1769
XagI	CCTNNNNNAGG	2 cut(s)	600, 1035
XapI	RAATTY	4 cut(s)	301, 343, 637, 749
XbaI	TCTAGA	2 cut(s)	374, 1673
XceI	RCATGY	3 cut(s)	737, 991, 1334
XhoI	CTCGAG	2 cut(s)	157, 209
XmiI	GTMKAC	1 cut(s)	883
XspI	CTAG	8 cut(s)	375, 879, 993, 1073, 1080, 1568, 1590, 1674
ZrmI	AGTACT	2 cut(s)	1015, 1761

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.