Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0004158

Physical Location & Seq

Genomic Coordinates Reverse (-)

55442436 .. 55447528

Gene Structure 5093 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00038060.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1617 bp

ATGGACTCGACCGCACCGGAATGCCCGCCGCCTCCCTCCGACGAACTCGATCCGGGCCTCACCGACTTCCATCCAGGCTCCGACCCGGCCTTCTCCACTTCCCGTTCCGGCGGTGGGGCCAAGTACAAGCTCATGTCGCCGGCGAAGCTCCCGATCTCGAGGTCCCCCTGCCTCACTATCCCTCCCGGCCTCACTCCGACGTCGTTTCTCGAGTCCCCGGTGCTCCTCTCCAACATGAAGGCAGAACCTTCTCCAACTACCGGGTCCTTTTTGAATCCTAAAATGGTCTATGGGACTGCAAATTCTACATATTCAGCAACCATGGTCTGCTCTGATGAAAGAAATTCTGGAAGCTTTGAGTTTAAGCCCCATTCTAGATTGAATATGTCCAAGGTCAAGGTCAAGGTCAGTCTCAATCACTTGCGTCACCACCTTTGGTTAAGAGTGAGATGGCAGGCTCCTCAAATCAATCAGGATTACCAGCTCCTGTTCATATGGTCTCGTCAGGGAGCTAGTGCACCTGTTGAAGTATCTTCTGATGATGGCTATAACTGGCGAAAATATGGACAAAAGCATGTTAAAGGAAGTGAATTTCCTCGCAGTTATTACAAATGCACACATCCCAACTGTGAAGTGAAGAAACTGTTTGAGCGATCTCATGAGGGACATATAACAGAGATTATCTACAAGGGTACACATGATCACCCTAAGCCTCAACCTAGTCGACGATATAATACCGGTGCTATGATGAATGTCCAGGAAGAAAGATCTGACAAGGCTTTATCTTTGACTGGCCGAGATGACAAGTCATCCAGTATGTATGGGCAAATGTCTTGTACCAATGAGCCAAATAGTACTCCGGAGCTATCCCCTGTCAGAGGAAATGATGGTAGTGTTGAAGGAACTGGCTCACTATCAACTAGAATACTCGATGAGGTCGATGATGATGACCCATTCTCTAAAAGGAGGAGGATGGATGTTGGTGGAATTGATGTTACACCAGTTGTTAAGCCTATCCGGGAACCACGAGTTGTTGTTCAAACTCTGAGTGAGGTTGATATATTGGATGATGGATACCGTTGGCGCAAATATGGTCAGAAAGTTGTAAGGGGAAATCCTAATCCAAGGAGCTATTACAAGTGCACAAATGCTGGATGCCCTGTTAGGAAGCATGTGGAGAGGGCATCCCATGATCCAAAAGCAGTTATAACTACATATGAGGGAAAACATAATCATGATGTCCCAACCGCAAGGACTAGTAGCCATGACACTTCGGGACCAACAACCGTGAATGCCCCTTCGAGGATTAGAACAGAGGAAAATGACACCATAAGCCTTGATCTTGGTGTTGGAATGAGCTCTGCTGCTGAAAATAGATCCAACAATCACCTGCGATTGCACTCTGAACTAGCAGAAAGACAAACTCACCCTAGTTCCAATTTTAAGGCTGTTCAAACTACCCCTGCTCCGTCATACTATGGTGTTTTAAATAGTGGCATGAATCAGTATGGATCTAGAGAAAATCCAAGTGAATCACGTAGCATCGAGATTCCACCATTAAACCATTCTTCTTACCCATATCCACAGAACATGGGTAGAGTACTAACAGGTCCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0006950 GO:0008150 GO:0009611 GO:0009889 GO:0009891 GO:0009893 GO:0009961 GO:0010033 GO:0010243 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0042221 GO:0043200 GO:0043565 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1901698 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WRKY

Protein Analysis

538

Amino Acids

59.77

Weight (kDa)

8.7

Isoelectric Point (pI)

55.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WRKY	PF03106	180 - 236	3.7e-25	WRKY DNA -binding domain
WRKY	PF03106	356 - 413	1.1e-26	WRKY DNA -binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004158)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26640 AT4G26640 AT4G26640 AT4G26640 AT4G26640 AT4G26640 AT4G26640
fragaria_vesca	FvH4_3g24010 FvH4_3g24010
malus_domestica	MD03G1188900.v1.1 MD11G1205000.v1.1
prunus_persica	Prupe.4G232600_v2.0.a1 Prupe.4G232600_v2.0.a1 Prupe.4G232600_v2.0.a1
pyrus_communis	pycom03g14170 pycom11g17770
rosa_chinensis	RchiOBHm_Chr5g0042581 RchiOBHm_Chr5g0042601
rosa_laevigata	RLG00000034142
rosa_multiflora	Rmu_sc0004704.1_g000005 Rmu_sc0004704.1_g000010 Rmu_sc0012301.1_g000004 Rmu_sc0012301.1_g000009
rosa_roxburghii	Rroxscaffold_1G00038060
rosa_rugosa	Rorug05G0202900 Rorug05G0203000 Rorug05G0203100
rosa_samantha	Rh5AG287900 Rh5AG288300 Rh5BG292300 Rh5CG324700 Rh5DG302100
rosa_wichuraiana	Rw5G026730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1208
AarI	CACCTGC	1 cut(s)	1398
AatII	GACGTC	1 cut(s)	203
Acc36I	ACCTGC	1 cut(s)	1398
AccI	GTMKAC	1 cut(s)	724
AccIII	TCCGGA	1 cut(s)	859
AciI	CCGC	5 cut(s)	12, 26, 29, 111, 1248
AclWI	GGATC	4 cut(s)	44, 1187, 1371, 1519
AcoI	YGGCCR	1 cut(s)	793
AcsI	RAATTY	3 cut(s)	301, 343, 590
AcyI	GRCGYC	1 cut(s)	200
AfaI	GTAC	5 cut(s)	125, 694, 838, 856, 1602
AfiI	CCNNNNNNNGG	4 cut(s)	114, 260, 878, 1302
AgeI	ACCGGT	1 cut(s)	737
AgsI	TTSAA	6 cut(s)	274, 382, 527, 899, 1040, 1454
AhlI	ACTAGT	1 cut(s)	1256
AjnI	CCWGG	2 cut(s)	73, 756
AluBI	AGCT	8 cut(s)	130, 148, 354, 484, 512, 865, 1131, 1359
AluI	AGCT	8 cut(s)	130, 148, 354, 484, 512, 865, 1131, 1359
Alw21I	GWGCWC	4 cut(s)	225, 520, 1145, 1361
Alw26I	GTCTC	2 cut(s)	416, 504
Alw44I	GTGCAC	2 cut(s)	516, 1141
AlwI	GGATC	4 cut(s)	44, 1187, 1371, 1519
AlwNI	CAGNNNCTG	1 cut(s)	487
Ama87I	CYCGRG	2 cut(s)	157, 209
Aor13HI	TCCGGA	1 cut(s)	859
AoxI	GGCC	5 cut(s)	55, 87, 117, 187, 793
ApaLI	GTGCAC	2 cut(s)	516, 1141
ApeKI	GCWGC	1 cut(s)	1364
ApoI	RAATTY	3 cut(s)	301, 343, 590
AsiGI	ACCGGT	1 cut(s)	737
AspLEI	GCGC	1 cut(s)	1086
AspS9I	GGNCC	6 cut(s)	55, 117, 162, 264, 1277, 1610
AsuC2I	CCSGG	6 cut(s)	54, 86, 186, 218, 262, 1019
AsuHPI	GGTGA	5 cut(s)	52, 419, 695, 1379, 1418
AvaI	CYCGRG	2 cut(s)	157, 209
AvaII	GGWCC	4 cut(s)	162, 264, 1277, 1610
BaeGI	GKGCMC	2 cut(s)	520, 1145
BanII	GRGCYC	1 cut(s)	1361
BauI	CACGAG	1 cut(s)	1026
Bbv12I	GWGCWC	4 cut(s)	225, 520, 1145, 1361
BbvI	GCAGC	1 cut(s)	1351
BccI	CCATC	6 cut(s)	78, 444, 536, 881, 967, 1064
BciT130I	CCWGG	2 cut(s)	75, 758
BciVI	GTATCC	1 cut(s)	1067
BclI	TGATCA	1 cut(s)	700
BcnI	CCSGG	6 cut(s)	54, 86, 186, 218, 262, 1019
BcoDI	GTCTC	2 cut(s)	416, 504
BcuI	ACTAGT	1 cut(s)	1256
BfaI	CTAG	8 cut(s)	375, 513, 720, 921, 1257, 1409, 1431, 1515
BfuAI	ACCTGC	1 cut(s)	1398
BfuI	GTATCC	1 cut(s)	1067
BglII	AGATCT	1 cut(s)	767
BisI	GCNGC	2 cut(s)	29, 1365
BlsI	GCNGC	2 cut(s)	30, 1366
BmcAI	AGTACT	2 cut(s)	856, 1602
Bme1390I	CCNGG	8 cut(s)	54, 75, 86, 186, 218, 262, 758, 1019
Bme18I	GGWCC	4 cut(s)	162, 264, 1277, 1610
BmeT110I	CYCGRG	2 cut(s)	157, 209
BmgT120I	GGNCC	6 cut(s)	55, 117, 162, 264, 1277, 1610
BmiI	GGNNCC	7 cut(s)	79, 118, 164, 265, 459, 1023, 1278
BmrFI	CCNGG	8 cut(s)	54, 75, 86, 186, 218, 262, 758, 1019
BmsI	GCATC	3 cut(s)	1145, 1193, 1551
Bpu10I	CCTNAGC	1 cut(s)	708
BpuMI	CCSGG	6 cut(s)	54, 86, 186, 218, 262, 1019
BsaAI	YACGTR	1 cut(s)	1538
BsaHI	GRCGYC	1 cut(s)	200
BsaI	GGTCTC	1 cut(s)	504
BsaJI	CCNNGG	4 cut(s)	216, 321, 390, 1124
BsaWI	WCCGGW	3 cut(s)	16, 737, 859
BsaXI	ACNNNNNCTCC	4 cut(s)	166, 196, 1450, 1480
Bsc4I	CCNNNNNNNGG	4 cut(s)	114, 260, 878, 1302
Bse118I	RCCGGY	2 cut(s)	139, 737
Bse1I	ACTGG	5 cut(s)	557, 796, 813, 910, 1001
BseAI	TCCGGA	1 cut(s)	859
BseBI	CCWGG	2 cut(s)	75, 758
BseDI	CCNNGG	4 cut(s)	216, 321, 390, 1124
BseGI	GGATG	8 cut(s)	70, 619, 809, 978, 982, 1072, 1160, 1184
BseLI	CCNNNNNNNGG	4 cut(s)	114, 260, 878, 1302
BseMII	CTCAG	1 cut(s)	1037
BseNI	ACTGG	5 cut(s)	557, 796, 813, 910, 1001
BseRI	GAGGAG	3 cut(s)	215, 450, 982
BseSI	GKGCMC	2 cut(s)	520, 1145
BseXI	GCAGC	1 cut(s)	1351
Bsh1285I	CGRYCG	1 cut(s)	12
BshFI	GGCC	5 cut(s)	57, 89, 119, 189, 795
BshTI	ACCGGT	1 cut(s)	737
BsiEI	CGRYCG	1 cut(s)	12
BsiHKAI	GWGCWC	4 cut(s)	225, 520, 1145, 1361
BsiHKCI	CYCGRG	2 cut(s)	157, 209
BslFI	GGGAC	6 cut(s)	148, 199, 307, 678, 1226, 1290
BslI	CCNNNNNNNGG	4 cut(s)	114, 260, 878, 1302
BsmAI	GTCTC	2 cut(s)	416, 504
BsmFI	GGGAC	6 cut(s)	148, 199, 307, 678, 1226, 1290
BsmI	GAATGC	2 cut(s)	26, 1297
BsnI	GGCC	5 cut(s)	57, 89, 119, 189, 795
Bso31I	GGTCTC	1 cut(s)	504
BsoBI	CYCGRG	2 cut(s)	157, 209
Bsp1286I	GDGCHC	4 cut(s)	225, 520, 1145, 1361
Bsp13I	TCCGGA	1 cut(s)	859
Bsp143I	GATC	9 cut(s)	49, 153, 653, 700, 767, 1192, 1339, 1376, 1511
Bsp19I	CCATGG	1 cut(s)	321
BspACI	CCGC	5 cut(s)	12, 26, 29, 111, 1248
BspANI	GGCC	5 cut(s)	57, 89, 119, 189, 795
BspCNI	CTCAG	1 cut(s)	1038
BspEI	TCCGGA	1 cut(s)	859
BspHI	TCATGA	2 cut(s)	658, 1234
BspLI	GGNNCC	7 cut(s)	79, 118, 164, 265, 459, 1023, 1278
BspMI	ACCTGC	1 cut(s)	1398
BspPI	GGATC	4 cut(s)	44, 1187, 1371, 1519
BspTNI	GGTCTC	1 cut(s)	504
BsrFI	RCCGGY	2 cut(s)	139, 737
BsrI	ACTGG	5 cut(s)	557, 796, 813, 910, 1001
BssAI	RCCGGY	2 cut(s)	139, 737
BssECI	CCNNGG	4 cut(s)	216, 321, 390, 1124
BssMI	GATC	9 cut(s)	49, 153, 653, 700, 767, 1192, 1339, 1376, 1511
BssNI	GRCGYC	1 cut(s)	200
BssSI	CACGAG	1 cut(s)	1026
BssT1I	CCWWGG	3 cut(s)	321, 390, 1124
Bst2BI	CACGAG	1 cut(s)	1026
Bst2UI	CCWGG	2 cut(s)	75, 758
Bst4CI	ACNGT	4 cut(s)	629, 645, 1079, 1288
BstACI	GRCGYC	1 cut(s)	200
BstBAI	YACGTR	1 cut(s)	1538
BstC8I	GCNNGC	3 cut(s)	26, 141, 456
BstDEI	CTNAG	2 cut(s)	708, 1046
BstDSI	CCRYGG	1 cut(s)	321
BstENI	CCTNNNNNAGG	1 cut(s)	876
BstF5I	GGATG	8 cut(s)	70, 619, 809, 978, 982, 1072, 1160, 1184
BstHHI	GCGC	1 cut(s)	1086
BstKTI	GATC	9 cut(s)	52, 156, 656, 703, 770, 1195, 1342, 1379, 1514
BstMAI	GTCTC	2 cut(s)	416, 504
BstMBI	GATC	9 cut(s)	49, 153, 653, 700, 767, 1192, 1339, 1376, 1511
BstMCI	CGRYCG	1 cut(s)	12
BstMWI	GCNNNNNNNGC	2 cut(s)	136, 145
BstNI	CCWGG	2 cut(s)	75, 758
BstNSI	RCATGY	2 cut(s)	578, 1175
BstSCI	CCNGG	8 cut(s)	52, 73, 84, 184, 216, 260, 756, 1017
BstSLI	GKGCMC	2 cut(s)	520, 1145
BstV1I	GCAGC	1 cut(s)	1351
BstX2I	RGATCY	3 cut(s)	767, 1376, 1511
BstYI	RGATCY	3 cut(s)	767, 1376, 1511
BsuI	GTATCC	1 cut(s)	1067
BsuRI	GGCC	5 cut(s)	57, 89, 119, 189, 795
BtgI	CCRYGG	1 cut(s)	321
BtsCI	GGATG	8 cut(s)	70, 619, 809, 978, 982, 1072, 1160, 1184
BveI	ACCTGC	1 cut(s)	1398
Cac8I	GCNNGC	3 cut(s)	26, 141, 456
CaiI	CAGNNNCTG	1 cut(s)	487
CciI	TCATGA	2 cut(s)	658, 1234
CfoI	GCGC	1 cut(s)	1086
Cfr10I	RCCGGY	2 cut(s)	139, 737
Cfr13I	GGNCC	6 cut(s)	55, 117, 162, 264, 1277, 1610
CseI	GACGC	1 cut(s)	413
Csp6I	GTAC	5 cut(s)	124, 693, 837, 855, 1601
CspAI	ACCGGT	1 cut(s)	737
CviQI	GTAC	5 cut(s)	124, 693, 837, 855, 1601
DdeI	CTNAG	2 cut(s)	708, 1046
DpnI	GATC	9 cut(s)	51, 155, 655, 702, 769, 1194, 1341, 1378, 1513
DpnII	GATC	9 cut(s)	49, 153, 653, 700, 767, 1192, 1339, 1376, 1511
DraI	TTTAAA	1 cut(s)	1488
EaeI	YGGCCR	1 cut(s)	793
Ecl136II	GAGCTC	1 cut(s)	1359
Eco130I	CCWWGG	3 cut(s)	321, 390, 1124
Eco24I	GRGCYC	1 cut(s)	1361
Eco31I	GGTCTC	1 cut(s)	504
Eco47I	GGWCC	4 cut(s)	162, 264, 1277, 1610
Eco53kI	GAGCTC	1 cut(s)	1359
Eco88I	CYCGRG	2 cut(s)	157, 209
EcoICRI	GAGCTC	1 cut(s)	1359
EcoNI	CCTNNNNNAGG	1 cut(s)	876
EcoO109I	RGGNCCY	2 cut(s)	162, 264
EcoRII	CCWGG	2 cut(s)	73, 756
EcoT14I	CCWWGG	3 cut(s)	321, 390, 1124
EcoT38I	GRGCYC	1 cut(s)	1361
ErhI	CCWWGG	3 cut(s)	321, 390, 1124
FaqI	GGGAC	6 cut(s)	148, 199, 307, 678, 1226, 1290
FauI	CCCGC	1 cut(s)	33
FauNDI	CATATG	2 cut(s)	494, 1216
FbaI	TGATCA	1 cut(s)	700
FblI	GTMKAC	1 cut(s)	724
Fnu4HI	GCNGC	2 cut(s)	29, 1365
FokI	GGATG	8 cut(s)	57, 606, 796, 985, 989, 1079, 1167, 1171
FriOI	GRGCYC	1 cut(s)	1361
Fsp4HI	GCNGC	2 cut(s)	29, 1365
FspBI	CTAG	8 cut(s)	375, 513, 720, 921, 1257, 1409, 1431, 1515
GlaI	GCGC	1 cut(s)	1085
GluI	GCNGC	2 cut(s)	29, 1365
HaeIII	GGCC	5 cut(s)	57, 89, 119, 189, 795
HgaI	GACGC	1 cut(s)	413
HhaI	GCGC	1 cut(s)	1086
Hin1I	GRCGYC	1 cut(s)	200
Hin6I	GCGC	1 cut(s)	1084
HinP1I	GCGC	1 cut(s)	1084
HincII	GTYRAC	1 cut(s)	725
HindII	GTYRAC	1 cut(s)	725
HindIII	AAGCTT	1 cut(s)	352
HinfI	GANTC	6 cut(s)	5, 212, 274, 1501, 1532, 1549
HphI	GGTGA	5 cut(s)	52, 419, 695, 1379, 1418
Hpy166II	GTNNAC	4 cut(s)	518, 695, 725, 1143
Hpy8I	GTNNAC	4 cut(s)	518, 695, 725, 1143
Hpy99I	CGWCG	4 cut(s)	44, 202, 205, 729
HpyAV	CCTTC	5 cut(s)	100, 232, 258, 893, 1308
HpyCH4III	ACNGT	4 cut(s)	629, 645, 1079, 1288
HpyCH4IV	ACGT	2 cut(s)	200, 1537
HpyCH4V	TGCA	5 cut(s)	299, 518, 615, 1143, 1399
HpyF10VI	GCNNNNNNNGC	2 cut(s)	136, 145
HpyF3I	CTNAG	2 cut(s)	708, 1046
HpySE526I	ACGT	2 cut(s)	200, 1537
Hsp92I	GRCGYC	1 cut(s)	200
HspAI	GCGC	1 cut(s)	1084
Kpn2I	TCCGGA	1 cut(s)	859
KroI	GCCGGC	1 cut(s)	139
KroNI	GCCGGC	1 cut(s)	141
Ksp22I	TGATCA	1 cut(s)	700
Kzo9I	GATC	9 cut(s)	49, 153, 653, 700, 767, 1192, 1339, 1376, 1511
LmnI	GCTCC	9 cut(s)	83, 153, 228, 463, 489, 509, 862, 1128, 1471
Lsp1109I	GCAGC	1 cut(s)	1351
LweI	GCATC	3 cut(s)	1145, 1193, 1551
MaeI	CTAG	8 cut(s)	375, 513, 720, 921, 1257, 1409, 1431, 1515
MaeII	ACGT	2 cut(s)	200, 1537
MaeIII	GTNAC	2 cut(s)	425, 994
MalI	GATC	9 cut(s)	51, 155, 655, 702, 769, 1194, 1341, 1378, 1513
MboI	GATC	9 cut(s)	49, 153, 653, 700, 767, 1192, 1339, 1376, 1511
MboII	GAAGA	4 cut(s)	525, 649, 773, 1560
MflI	RGATCY	3 cut(s)	767, 1376, 1511
MhlI	GDGCHC	4 cut(s)	225, 520, 1145, 1361
MluCI	AATT	5 cut(s)	301, 343, 590, 987, 1438
MlyI	GAGTC	1 cut(s)	221
MmeI	TCCRAC	7 cut(s)	63, 105, 221, 255, 278, 1330, 1404
MreI	CGCCGGCG	1 cut(s)	139
MroI	TCCGGA	1 cut(s)	859
MroNI	GCCGGC	1 cut(s)	139
MseI	TTAA	7 cut(s)	363, 440, 579, 1008, 1443, 1487, 1559
MslI	CAYNNNNRTG	2 cut(s)	19, 1233
MspR9I	CCNGG	8 cut(s)	54, 75, 86, 186, 218, 262, 758, 1019
Mva1269I	GAATGC	2 cut(s)	26, 1297
MvaI	CCWGG	2 cut(s)	75, 758
MwoI	GCNNNNNNNGC	2 cut(s)	136, 145
NaeI	GCCGGC	1 cut(s)	141
NciI	CCSGG	6 cut(s)	54, 86, 186, 218, 262, 1019
NcoI	CCATGG	1 cut(s)	321
NdeI	CATATG	2 cut(s)	494, 1216
NdeII	GATC	9 cut(s)	49, 153, 653, 700, 767, 1192, 1339, 1376, 1511
NgoMIV	GCCGGC	1 cut(s)	139
NlaIV	GGNNCC	7 cut(s)	79, 118, 164, 265, 459, 1023, 1278
NmeAIII	GCCGAG	1 cut(s)	821
NmuCI	GTSAC	1 cut(s)	425
NspI	RCATGY	2 cut(s)	578, 1175
PaeR7I	CTCGAG	2 cut(s)	157, 209
PagI	TCATGA	2 cut(s)	658, 1234
PaqCI	CACCTGC	1 cut(s)	1398
PcsI	WCGNNNNNNNCGW	1 cut(s)	936
PctI	GAATGC	2 cut(s)	26, 1297
PdiI	GCCGGC	1 cut(s)	141
PfeI	GAWTC	4 cut(s)	274, 1501, 1532, 1549
PfoI	TCCNGGA	2 cut(s)	756, 1017
PinAI	ACCGGT	1 cut(s)	737
PkrI	GCNGC	2 cut(s)	30, 1366
PleI	GAGTC	1 cut(s)	220
PpsI	GAGTC	1 cut(s)	220
Ppu21I	YACGTR	1 cut(s)	1538
PpuMI	RGGWCCY	2 cut(s)	162, 264
PsiI	TTATAA	1 cut(s)	1208
Psp124BI	GAGCTC	1 cut(s)	1361
Psp5II	RGGWCCY	2 cut(s)	162, 264
Psp6I	CCWGG	2 cut(s)	73, 756
PspGI	CCWGG	2 cut(s)	73, 756
PspN4I	GGNNCC	7 cut(s)	79, 118, 164, 265, 459, 1023, 1278
PspPI	GGNCC	6 cut(s)	55, 117, 162, 264, 1277, 1610
PspPPI	RGGWCCY	2 cut(s)	162, 264
PstNI	CAGNNNCTG	1 cut(s)	487
PsuI	RGATCY	3 cut(s)	767, 1376, 1511
RsaI	GTAC	5 cut(s)	125, 694, 838, 856, 1602
RsaNI	GTAC	5 cut(s)	124, 693, 837, 855, 1601
RseI	CAYNNNNRTG	2 cut(s)	19, 1233
SacI	GAGCTC	1 cut(s)	1361
SalI	GTCGAC	1 cut(s)	723
SaqAI	TTAA	7 cut(s)	363, 440, 579, 1008, 1443, 1487, 1559
SatI	GCNGC	2 cut(s)	29, 1365
Sau3AI	GATC	9 cut(s)	49, 153, 653, 700, 767, 1192, 1339, 1376, 1511
Sau96I	GGNCC	6 cut(s)	55, 117, 162, 264, 1277, 1610
ScaI	AGTACT	2 cut(s)	856, 1602
SchI	GAGTC	1 cut(s)	221
ScrFI	CCNGG	8 cut(s)	54, 75, 86, 186, 218, 262, 758, 1019
SduI	GDGCHC	4 cut(s)	225, 520, 1145, 1361
SfaNI	GCATC	3 cut(s)	1145, 1193, 1551
Sfr274I	CTCGAG	2 cut(s)	157, 209
SgrAI	CRCCGGYG	1 cut(s)	139
SinI	GGWCC	4 cut(s)	162, 264, 1277, 1610
SlaI	CTCGAG	2 cut(s)	157, 209
SmiMI	CAYNNNNRTG	2 cut(s)	19, 1233
SmlI	CTYRAG	2 cut(s)	157, 209
SmoI	CTYRAG	2 cut(s)	157, 209
SpeI	ACTAGT	1 cut(s)	1256
Sse9I	AATT	5 cut(s)	301, 343, 590, 987, 1438
SsiI	CCGC	5 cut(s)	12, 26, 29, 111, 1248
SspMI	CTAG	8 cut(s)	375, 513, 720, 921, 1257, 1409, 1431, 1515
SstI	GAGCTC	1 cut(s)	1361
StyD4I	CCNGG	8 cut(s)	52, 73, 84, 184, 216, 260, 756, 1017
StyI	CCWWGG	3 cut(s)	321, 390, 1124
TaaI	ACNGT	4 cut(s)	629, 645, 1079, 1288
TaiI	ACGT	2 cut(s)	203, 1540
TaqI	TCGA	9 cut(s)	8, 48, 158, 210, 724, 930, 939, 1301, 1545
TasI	AATT	5 cut(s)	301, 343, 590, 987, 1438
TatI	WGTACW	3 cut(s)	123, 854, 1600
TauI	GCSGC	1 cut(s)	31
TfiI	GAWTC	4 cut(s)	274, 1501, 1532, 1549
Tru1I	TTAA	7 cut(s)	363, 440, 579, 1008, 1443, 1487, 1559
Tru9I	TTAA	7 cut(s)	363, 440, 579, 1008, 1443, 1487, 1559
TseFI	GTSAC	1 cut(s)	425
TseI	GCWGC	1 cut(s)	1364
Tsp45I	GTSAC	1 cut(s)	425
TspDTI	ATGAA	5 cut(s)	251, 351, 481, 764, 1514
TspGWI	ACGGA	1 cut(s)	1458
VneI	GTGCAC	2 cut(s)	516, 1141
VpaK11BI	GGWCC	4 cut(s)	162, 264, 1277, 1610
XagI	CCTNNNNNAGG	1 cut(s)	876
XapI	RAATTY	3 cut(s)	301, 343, 590
XbaI	TCTAGA	2 cut(s)	374, 1514
XceI	RCATGY	2 cut(s)	578, 1175
XhoI	CTCGAG	2 cut(s)	157, 209
XmiI	GTMKAC	1 cut(s)	724
XspI	CTAG	8 cut(s)	375, 513, 720, 921, 1257, 1409, 1431, 1515
ZraI	GACGTC	1 cut(s)	201
ZrmI	AGTACT	2 cut(s)	856, 1602

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.