Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0004158

Physical Location & Seq

Genomic Coordinates Forward (+)

37237182 .. 37241782

Gene Structure 4601 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG292300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1746 bp

ATGGACTCGACCGCACCGGAATGCCCCCCGCCTCCCTCCGACGAACTCGATCCGGGCCTCACCGACTTCCATCCCGGCTCCGACCCGGCCTTCTCCACTTCCCGTTCCAGCGGTGGTGGGGCCAAGTACAAGCTCATGTCGCCGGCGAAGCTCCCGATCTCGAGGTCCCCCTGCCTCACTATCCCTCCCGGCCTCACTCCGACGTCGTTTCTCGAGTCCCCGGTGCTCCTCTCCAACATGAAGGCAGAACCTTCTCCAACTACCGGGTCCTTTTTGAATCCTAAAATGGTCTATGGGACTGCGAATTCTACATATTCAGCAACCATGGTTTGCTCTGATGAAAGAAATTCTGGAAGCTTTGAGTTTAAGCCCCATTCTAGATTGAATATGGTTACTATGGATTATGACCACCAGAGCAATGAGCAGGCTGTGCAAGTCCAAGGTCAAGGTCAGTCTCAATCACATGCGTCACCACCTTTGGTTAAGAGTGAGATGGCAGGCTCCTCAAATCAATCAGGATTACCAGCTCCTGTTCATATGGTCTCGTCAGGAGCTAGTGCACCTGTTGAAGGTGATGCGGATGATATAAGTCAGAGGGCAAATCCAAATTCTGGTGTCCAAACATCACAGTTTGATCATAAAGGAAGTGGGCCTTCAGTATCTTCTGATGATGGCTATAACTGGCGAAAATATGGACAAAAGCATGTTAAAGGAAGTGAATTTCCTCGCAGTTATTACAAATGCACACATCCCAACTGTGAAGTGAAGAAACTGTTTGAGCGATCTCATGAGGGACATATAACAGAGATTATCTACAAGGGTACACATGATCACCCTAAGCCTCAACCTAGTCGACGATATAATACCGGTGCTATGATGAATGTCCAGGAAGAAAGATCTGACAAGGCTTTATCTTTGACTGGCCGAGATGACAAGTCATCCAGTATGTATGGGCAAATGTCTTGTACCAATGAGCCAAATAGTACTCCGGAGCTATCCCCTGTCAGAGGAAATGATGGTAGTGTTGAAGGAACTGGCTCACTATCAACTAGAATACTCGATGAGGTCGATGATGATGACCCATTCTCTAAAAGGAGGAGGATGGATGTTGGTGGAATTGATGTTACACCAGTTGTTAAGCCTATTCGGGAACCACGAGTTGTTGTTCAAACTCTGAGTGAGGTTGATATATTGGATGATGGATACCGCTGGCGCAAATATGGTCAGAAAGTTGTGAGGGGAAATCCTAATCCAAGGAGCTATTACAAGTGCACAAATGCGGGATGCCCTGTTAGGAAGCATGTGGAGAGGGCATCCCATGATCCAAAAGCAGTTATAACTACATATGAGGGAAAACATAATCATGATGTCCCAACCGCAAGGACTAGTAGCCATGACACTTCGGGACCAACACCCGTGAATGCCCCTTCGAGGATTAGAACAGAGGAAAATGACACCATAAGCCTTGATCTTGGTGTTGGAATGAGCTCTGCTGCTGAAAATAGATCCAACAATCACCTGCGATTGCACTCTGAACTAGCAGAAAGACAAACTCACCCTAGTTCCAATTTTAAGGCTGTTCAAACTACCCCTGCTCCGTCATACTATGGTGTTTTAAATAGTGGCATGAATCAGTATGGATCTAGAGAAAATCCAAGTGAATCACGTAGCATCGAGATTCCACCTTTAAACCATTCTTCTTACCCATATCCACAGAACATGGGAAGAGTACTAACGGGGCCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0006950 GO:0008150 GO:0009611 GO:0009889 GO:0009891 GO:0009893 GO:0009961 GO:0010033 GO:0010243 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0042221 GO:0043200 GO:0043565 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1901698 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WRKY

Protein Analysis

581

Amino Acids

63.34

Weight (kDa)

6.5

Isoelectric Point (pI)

56.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WRKY	PF03106	223 - 279	4.2e-25	WRKY DNA -binding domain
WRKY	PF03106	399 - 456	1.2e-26	WRKY DNA -binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004158)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26640 AT4G26640 AT4G26640 AT4G26640 AT4G26640 AT4G26640 AT4G26640
fragaria_vesca	FvH4_3g24010 FvH4_3g24010
malus_domestica	MD03G1188900.v1.1 MD11G1205000.v1.1
prunus_persica	Prupe.4G232600_v2.0.a1 Prupe.4G232600_v2.0.a1 Prupe.4G232600_v2.0.a1
pyrus_communis	pycom03g14170 pycom11g17770
rosa_chinensis	RchiOBHm_Chr5g0042581 RchiOBHm_Chr5g0042601
rosa_laevigata	RLG00000034142
rosa_multiflora	Rmu_sc0004704.1_g000005 Rmu_sc0004704.1_g000010 Rmu_sc0012301.1_g000004 Rmu_sc0012301.1_g000009
rosa_roxburghii	Rroxscaffold_1G00038060
rosa_rugosa	Rorug05G0202900 Rorug05G0203000 Rorug05G0203100
rosa_samantha	Rh5AG287900 Rh5AG288300 Rh5BG292300 Rh5CG324700 Rh5DG302100
rosa_wichuraiana	Rw5G026730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1337
AarI	CACCTGC	1 cut(s)	1527
AatII	GACGTC	1 cut(s)	206
Acc36I	ACCTGC	1 cut(s)	1527
AccB7I	CCANNNNNTGG	1 cut(s)	611
AccI	GTMKAC	1 cut(s)	853
AccIII	TCCGGA	1 cut(s)	988
AciI	CCGC	7 cut(s)	12, 29, 111, 578, 1207, 1280, 1377
AclWI	GGATC	4 cut(s)	44, 1316, 1500, 1648
AcoI	YGGCCR	1 cut(s)	922
AcsI	RAATTY	4 cut(s)	304, 346, 607, 719
AcuI	CTGAAG	1 cut(s)	639
AcyI	GRCGYC	1 cut(s)	203
AfaI	GTAC	5 cut(s)	128, 823, 967, 985, 1731
AfiI	CCNNNNNNNGG	5 cut(s)	263, 569, 611, 1007, 1431
AgeI	ACCGGT	1 cut(s)	866
AgsI	TTSAA	6 cut(s)	277, 385, 569, 1028, 1169, 1583
AhlI	ACTAGT	1 cut(s)	1385
AjnI	CCWGG	1 cut(s)	885
AluBI	AGCT	8 cut(s)	133, 151, 357, 527, 554, 994, 1260, 1488
AluI	AGCT	8 cut(s)	133, 151, 357, 527, 554, 994, 1260, 1488
Alw21I	GWGCWC	4 cut(s)	228, 562, 1274, 1490
Alw26I	GTCTC	2 cut(s)	459, 547
Alw44I	GTGCAC	2 cut(s)	558, 1270
AlwI	GGATC	4 cut(s)	44, 1316, 1500, 1648
AlwNI	CAGNNNCTG	1 cut(s)	530
Ama87I	CYCGRG	2 cut(s)	160, 212
Aor13HI	TCCGGA	1 cut(s)	988
AoxI	GGCC	7 cut(s)	55, 87, 120, 190, 650, 922, 1739
ApaLI	GTGCAC	2 cut(s)	558, 1270
ApeKI	GCWGC	1 cut(s)	1493
ApoI	RAATTY	4 cut(s)	304, 346, 607, 719
AsiGI	ACCGGT	1 cut(s)	866
AspLEI	GCGC	1 cut(s)	1215
AspS9I	GGNCC	7 cut(s)	55, 120, 165, 267, 650, 1406, 1739
AsuC2I	CCSGG	6 cut(s)	54, 75, 86, 189, 221, 265
AsuHPI	GGTGA	6 cut(s)	52, 462, 584, 824, 1508, 1547
AvaI	CYCGRG	2 cut(s)	160, 212
AvaII	GGWCC	3 cut(s)	165, 267, 1406
BaeGI	GKGCMC	2 cut(s)	562, 1274
BanII	GRGCYC	1 cut(s)	1490
BauI	CACGAG	1 cut(s)	1155
Bbv12I	GWGCWC	4 cut(s)	228, 562, 1274, 1490
BbvI	GCAGC	1 cut(s)	1480
BccI	CCATC	6 cut(s)	78, 487, 665, 1010, 1096, 1193
BciT130I	CCWGG	1 cut(s)	887
BciVI	GTATCC	1 cut(s)	1196
BclI	TGATCA	2 cut(s)	634, 829
BcnI	CCSGG	6 cut(s)	54, 75, 86, 189, 221, 265
BcoDI	GTCTC	2 cut(s)	459, 547
BcuI	ACTAGT	1 cut(s)	1385
BfaI	CTAG	8 cut(s)	378, 555, 849, 1050, 1386, 1538, 1560, 1644
BfuAI	ACCTGC	1 cut(s)	1527
BfuI	GTATCC	1 cut(s)	1196
BglII	AGATCT	1 cut(s)	896
BisI	GCNGC	1 cut(s)	1494
BlsI	GCNGC	1 cut(s)	1495
BmcAI	AGTACT	2 cut(s)	985, 1731
Bme1390I	CCNGG	7 cut(s)	54, 75, 86, 189, 221, 265, 887
Bme18I	GGWCC	3 cut(s)	165, 267, 1406
BmeT110I	CYCGRG	2 cut(s)	160, 212
BmgT120I	GGNCC	7 cut(s)	55, 120, 165, 267, 650, 1406, 1739
BmiI	GGNNCC	8 cut(s)	79, 121, 167, 268, 502, 1152, 1407, 1740
BmrFI	CCNGG	7 cut(s)	54, 75, 86, 189, 221, 265, 887
BmsI	GCATC	4 cut(s)	565, 1274, 1322, 1680
Bpu10I	CCTNAGC	1 cut(s)	837
BpuMI	CCSGG	6 cut(s)	54, 75, 86, 189, 221, 265
BsaAI	YACGTR	1 cut(s)	1667
BsaHI	GRCGYC	1 cut(s)	203
BsaI	GGTCTC	1 cut(s)	547
BsaJI	CCNNGG	4 cut(s)	219, 324, 439, 1253
BsaWI	WCCGGW	3 cut(s)	16, 866, 988
BsaXI	ACNNNNNCTCC	4 cut(s)	169, 199, 1579, 1609
Bsc4I	CCNNNNNNNGG	5 cut(s)	263, 569, 611, 1007, 1431
Bse118I	RCCGGY	2 cut(s)	142, 866
Bse1I	ACTGG	5 cut(s)	686, 925, 942, 1039, 1130
Bse3DI	GCAATG	1 cut(s)	424
BseAI	TCCGGA	1 cut(s)	988
BseBI	CCWGG	1 cut(s)	887
BseDI	CCNNGG	4 cut(s)	219, 324, 439, 1253
BseGI	GGATG	9 cut(s)	70, 586, 748, 938, 1107, 1111, 1201, 1289, 1313
BseLI	CCNNNNNNNGG	5 cut(s)	263, 569, 611, 1007, 1431
BseMI	GCAATG	1 cut(s)	424
BseMII	CTCAG	1 cut(s)	1166
BseNI	ACTGG	5 cut(s)	686, 925, 942, 1039, 1130
BseRI	GAGGAG	3 cut(s)	218, 493, 1111
BseSI	GKGCMC	2 cut(s)	562, 1274
BseXI	GCAGC	1 cut(s)	1480
Bsh1285I	CGRYCG	1 cut(s)	12
BshFI	GGCC	7 cut(s)	57, 89, 122, 192, 652, 924, 1741
BshTI	ACCGGT	1 cut(s)	866
BsiEI	CGRYCG	1 cut(s)	12
BsiHKAI	GWGCWC	4 cut(s)	228, 562, 1274, 1490
BsiHKCI	CYCGRG	2 cut(s)	160, 212
BslFI	GGGAC	6 cut(s)	151, 202, 310, 807, 1355, 1419
BslI	CCNNNNNNNGG	5 cut(s)	263, 569, 611, 1007, 1431
BsmAI	GTCTC	2 cut(s)	459, 547
BsmFI	GGGAC	6 cut(s)	151, 202, 310, 807, 1355, 1419
BsmI	GAATGC	2 cut(s)	26, 1426
BsnI	GGCC	7 cut(s)	57, 89, 122, 192, 652, 924, 1741
Bso31I	GGTCTC	1 cut(s)	547
BsoBI	CYCGRG	2 cut(s)	160, 212
Bsp1286I	GDGCHC	4 cut(s)	228, 562, 1274, 1490
Bsp13I	TCCGGA	1 cut(s)	988
Bsp19I	CCATGG	1 cut(s)	324
BspACI	CCGC	7 cut(s)	12, 29, 111, 578, 1207, 1280, 1377
BspANI	GGCC	7 cut(s)	57, 89, 122, 192, 652, 924, 1741
BspCNI	CTCAG	1 cut(s)	1167
BspEI	TCCGGA	1 cut(s)	988
BspHI	TCATGA	2 cut(s)	787, 1363
BspLI	GGNNCC	8 cut(s)	79, 121, 167, 268, 502, 1152, 1407, 1740
BspMI	ACCTGC	1 cut(s)	1527
BspPI	GGATC	4 cut(s)	44, 1316, 1500, 1648
BspTNI	GGTCTC	1 cut(s)	547
BsrDI	GCAATG	1 cut(s)	424
BsrFI	RCCGGY	2 cut(s)	142, 866
BsrI	ACTGG	5 cut(s)	686, 925, 942, 1039, 1130
BssAI	RCCGGY	2 cut(s)	142, 866
BssECI	CCNNGG	4 cut(s)	219, 324, 439, 1253
BssNI	GRCGYC	1 cut(s)	203
BssSI	CACGAG	1 cut(s)	1155
BssT1I	CCWWGG	3 cut(s)	324, 439, 1253
Bst2BI	CACGAG	1 cut(s)	1155
Bst2UI	CCWGG	1 cut(s)	887
Bst4CI	ACNGT	3 cut(s)	630, 758, 774
Bst6I	CTCTTC	1 cut(s)	1720
BstACI	GRCGYC	1 cut(s)	203
BstAPI	GCANNNNNTGC	1 cut(s)	430
BstBAI	YACGTR	1 cut(s)	1667
BstC8I	GCNNGC	4 cut(s)	144, 426, 499, 1211
BstDEI	CTNAG	2 cut(s)	837, 1175
BstDSI	CCRYGG	1 cut(s)	324
BstENI	CCTNNNNNAGG	2 cut(s)	567, 1005
BstF5I	GGATG	9 cut(s)	70, 586, 748, 938, 1107, 1111, 1201, 1289, 1313
BstHHI	GCGC	1 cut(s)	1215
BstMAI	GTCTC	2 cut(s)	459, 547
BstMCI	CGRYCG	1 cut(s)	12
BstMWI	GCNNNNNNNGC	3 cut(s)	139, 148, 430
BstNI	CCWGG	1 cut(s)	887
BstNSI	RCATGY	3 cut(s)	467, 707, 1304
BstSCI	CCNGG	7 cut(s)	52, 73, 84, 187, 219, 263, 885
BstSLI	GKGCMC	2 cut(s)	562, 1274
BstV1I	GCAGC	1 cut(s)	1480
BstX2I	RGATCY	3 cut(s)	896, 1505, 1640
BstYI	RGATCY	3 cut(s)	896, 1505, 1640
BsuI	GTATCC	1 cut(s)	1196
BsuRI	GGCC	7 cut(s)	57, 89, 122, 192, 652, 924, 1741
BtgI	CCRYGG	1 cut(s)	324
BtsCI	GGATG	9 cut(s)	70, 586, 748, 938, 1107, 1111, 1201, 1289, 1313
BveI	ACCTGC	1 cut(s)	1527
Cac8I	GCNNGC	4 cut(s)	144, 426, 499, 1211
CaiI	CAGNNNCTG	1 cut(s)	530
CciI	TCATGA	2 cut(s)	787, 1363
CfoI	GCGC	1 cut(s)	1215
Cfr10I	RCCGGY	2 cut(s)	142, 866
Cfr13I	GGNCC	7 cut(s)	55, 120, 165, 267, 650, 1406, 1739
CseI	GACGC	1 cut(s)	456
Csp6I	GTAC	5 cut(s)	127, 822, 966, 984, 1730
CspAI	ACCGGT	1 cut(s)	866
CviQI	GTAC	5 cut(s)	127, 822, 966, 984, 1730
DdeI	CTNAG	2 cut(s)	837, 1175
DraI	TTTAAA	2 cut(s)	1617, 1689
EaeI	YGGCCR	1 cut(s)	922
Eam1104I	CTCTTC	1 cut(s)	1720
EarI	CTCTTC	1 cut(s)	1720
Ecl136II	GAGCTC	1 cut(s)	1488
Eco130I	CCWWGG	3 cut(s)	324, 439, 1253
Eco24I	GRGCYC	1 cut(s)	1490
Eco31I	GGTCTC	1 cut(s)	547
Eco47I	GGWCC	3 cut(s)	165, 267, 1406
Eco53kI	GAGCTC	1 cut(s)	1488
Eco57I	CTGAAG	1 cut(s)	639
Eco88I	CYCGRG	2 cut(s)	160, 212
EcoICRI	GAGCTC	1 cut(s)	1488
EcoNI	CCTNNNNNAGG	2 cut(s)	567, 1005
EcoO109I	RGGNCCY	2 cut(s)	165, 267
EcoRI	GAATTC	1 cut(s)	304
EcoRII	CCWGG	1 cut(s)	885
EcoT14I	CCWWGG	3 cut(s)	324, 439, 1253
EcoT38I	GRGCYC	1 cut(s)	1490
ErhI	CCWWGG	3 cut(s)	324, 439, 1253
FalI	AAGNNNNNCTT	2 cut(s)	637, 669
FaqI	GGGAC	6 cut(s)	151, 202, 310, 807, 1355, 1419
FauI	CCCGC	2 cut(s)	36, 1273
FauNDI	CATATG	2 cut(s)	537, 1345
FbaI	TGATCA	2 cut(s)	634, 829
FblI	GTMKAC	1 cut(s)	853
Fnu4HI	GCNGC	1 cut(s)	1494
FokI	GGATG	9 cut(s)	57, 593, 735, 925, 1114, 1118, 1208, 1296, 1300
FriOI	GRGCYC	1 cut(s)	1490
Fsp4HI	GCNGC	1 cut(s)	1494
FspBI	CTAG	8 cut(s)	378, 555, 849, 1050, 1386, 1538, 1560, 1644
GlaI	GCGC	1 cut(s)	1214
GluI	GCNGC	1 cut(s)	1494
HaeIII	GGCC	7 cut(s)	57, 89, 122, 192, 652, 924, 1741
HgaI	GACGC	1 cut(s)	456
HhaI	GCGC	1 cut(s)	1215
Hin1I	GRCGYC	1 cut(s)	203
Hin6I	GCGC	1 cut(s)	1213
HinP1I	GCGC	1 cut(s)	1213
HincII	GTYRAC	1 cut(s)	854
HindII	GTYRAC	1 cut(s)	854
HindIII	AAGCTT	1 cut(s)	355
HinfI	GANTC	6 cut(s)	5, 215, 277, 1630, 1661, 1678
HphI	GGTGA	6 cut(s)	52, 462, 584, 824, 1508, 1547
Hpy166II	GTNNAC	4 cut(s)	560, 824, 854, 1272
Hpy8I	GTNNAC	4 cut(s)	560, 824, 854, 1272
Hpy99I	CGWCG	4 cut(s)	44, 205, 208, 858
HpyAV	CCTTC	7 cut(s)	100, 235, 261, 563, 663, 1022, 1437
HpyCH4III	ACNGT	3 cut(s)	630, 758, 774
HpyCH4IV	ACGT	2 cut(s)	203, 1666
HpyCH4V	TGCA	5 cut(s)	433, 560, 744, 1272, 1528
HpyF10VI	GCNNNNNNNGC	3 cut(s)	139, 148, 430
HpyF3I	CTNAG	2 cut(s)	837, 1175
HpySE526I	ACGT	2 cut(s)	203, 1666
Hsp92I	GRCGYC	1 cut(s)	203
HspAI	GCGC	1 cut(s)	1213
Kpn2I	TCCGGA	1 cut(s)	988
KroI	GCCGGC	1 cut(s)	142
KroNI	GCCGGC	1 cut(s)	144
Ksp22I	TGATCA	2 cut(s)	634, 829
LmnI	GCTCC	9 cut(s)	83, 156, 231, 506, 532, 551, 991, 1257, 1600
Lsp1109I	GCAGC	1 cut(s)	1480
LweI	GCATC	4 cut(s)	565, 1274, 1322, 1680
MaeI	CTAG	8 cut(s)	378, 555, 849, 1050, 1386, 1538, 1560, 1644
MaeII	ACGT	2 cut(s)	203, 1666
MaeIII	GTNAC	3 cut(s)	391, 468, 1123
MboII	GAAGA	5 cut(s)	654, 778, 902, 1689, 1737
MflI	RGATCY	3 cut(s)	896, 1505, 1640
MhlI	GDGCHC	4 cut(s)	228, 562, 1274, 1490
MluCI	AATT	6 cut(s)	304, 346, 607, 719, 1116, 1567
MlyI	GAGTC	1 cut(s)	224
MmeI	TCCRAC	7 cut(s)	63, 105, 224, 258, 281, 1459, 1533
MreI	CGCCGGCG	1 cut(s)	142
MroI	TCCGGA	1 cut(s)	988
MroNI	GCCGGC	1 cut(s)	142
MseI	TTAA	7 cut(s)	366, 483, 708, 1137, 1572, 1616, 1688
MslI	CAYNNNNRTG	2 cut(s)	19, 1362
MspA1I	CMGCKG	2 cut(s)	111, 1209
MspR9I	CCNGG	7 cut(s)	54, 75, 86, 189, 221, 265, 887
Mva1269I	GAATGC	2 cut(s)	26, 1426
MvaI	CCWGG	1 cut(s)	887
MwoI	GCNNNNNNNGC	3 cut(s)	139, 148, 430
NaeI	GCCGGC	1 cut(s)	144
NciI	CCSGG	6 cut(s)	54, 75, 86, 189, 221, 265
NcoI	CCATGG	1 cut(s)	324
NdeI	CATATG	2 cut(s)	537, 1345
NgoMIV	GCCGGC	1 cut(s)	142
NlaIV	GGNNCC	8 cut(s)	79, 121, 167, 268, 502, 1152, 1407, 1740
NmeAIII	GCCGAG	1 cut(s)	950
NmuCI	GTSAC	1 cut(s)	468
NspI	RCATGY	3 cut(s)	467, 707, 1304
PaeR7I	CTCGAG	2 cut(s)	160, 212
PagI	TCATGA	2 cut(s)	787, 1363
PaqCI	CACCTGC	1 cut(s)	1527
PcsI	WCGNNNNNNNCGW	2 cut(s)	1065, 1153
PctI	GAATGC	2 cut(s)	26, 1426
PdiI	GCCGGC	1 cut(s)	144
PfeI	GAWTC	4 cut(s)	277, 1630, 1661, 1678
PflMI	CCANNNNNTGG	1 cut(s)	611
PfoI	TCCNGGA	1 cut(s)	885
PinAI	ACCGGT	1 cut(s)	866
PkrI	GCNGC	1 cut(s)	1495
PleI	GAGTC	1 cut(s)	223
PpsI	GAGTC	1 cut(s)	223
Ppu21I	YACGTR	1 cut(s)	1667
PpuMI	RGGWCCY	2 cut(s)	165, 267
PsiI	TTATAA	1 cut(s)	1337
Psp124BI	GAGCTC	1 cut(s)	1490
Psp5II	RGGWCCY	2 cut(s)	165, 267
Psp6I	CCWGG	1 cut(s)	885
PspGI	CCWGG	1 cut(s)	885
PspN4I	GGNNCC	8 cut(s)	79, 121, 167, 268, 502, 1152, 1407, 1740
PspPI	GGNCC	7 cut(s)	55, 120, 165, 267, 650, 1406, 1739
PspPPI	RGGWCCY	2 cut(s)	165, 267
PstNI	CAGNNNCTG	1 cut(s)	530
PsuI	RGATCY	3 cut(s)	896, 1505, 1640
RsaI	GTAC	5 cut(s)	128, 823, 967, 985, 1731
RsaNI	GTAC	5 cut(s)	127, 822, 966, 984, 1730
RseI	CAYNNNNRTG	2 cut(s)	19, 1362
SacI	GAGCTC	1 cut(s)	1490
SalI	GTCGAC	1 cut(s)	852
SaqAI	TTAA	7 cut(s)	366, 483, 708, 1137, 1572, 1616, 1688
SatI	GCNGC	1 cut(s)	1494
Sau96I	GGNCC	7 cut(s)	55, 120, 165, 267, 650, 1406, 1739
ScaI	AGTACT	2 cut(s)	985, 1731
SchI	GAGTC	1 cut(s)	224
ScrFI	CCNGG	7 cut(s)	54, 75, 86, 189, 221, 265, 887
SduI	GDGCHC	4 cut(s)	228, 562, 1274, 1490
SfaNI	GCATC	4 cut(s)	565, 1274, 1322, 1680
Sfr274I	CTCGAG	2 cut(s)	160, 212
SgrAI	CRCCGGYG	1 cut(s)	142
SinI	GGWCC	3 cut(s)	165, 267, 1406
SlaI	CTCGAG	2 cut(s)	160, 212
SmiMI	CAYNNNNRTG	2 cut(s)	19, 1362
SmlI	CTYRAG	2 cut(s)	160, 212
SmoI	CTYRAG	2 cut(s)	160, 212
SpeI	ACTAGT	1 cut(s)	1385
Sse9I	AATT	6 cut(s)	304, 346, 607, 719, 1116, 1567
SsiI	CCGC	7 cut(s)	12, 29, 111, 578, 1207, 1280, 1377
SspMI	CTAG	8 cut(s)	378, 555, 849, 1050, 1386, 1538, 1560, 1644
SstI	GAGCTC	1 cut(s)	1490
StyD4I	CCNGG	7 cut(s)	52, 73, 84, 187, 219, 263, 885
StyI	CCWWGG	3 cut(s)	324, 439, 1253
TaaI	ACNGT	3 cut(s)	630, 758, 774
TaiI	ACGT	2 cut(s)	206, 1669
TaqI	TCGA	9 cut(s)	8, 48, 161, 213, 853, 1059, 1068, 1430, 1674
TasI	AATT	6 cut(s)	304, 346, 607, 719, 1116, 1567
TatI	WGTACW	3 cut(s)	126, 983, 1729
TfiI	GAWTC	4 cut(s)	277, 1630, 1661, 1678
Tru1I	TTAA	7 cut(s)	366, 483, 708, 1137, 1572, 1616, 1688
Tru9I	TTAA	7 cut(s)	366, 483, 708, 1137, 1572, 1616, 1688
TseFI	GTSAC	1 cut(s)	468
TseI	GCWGC	1 cut(s)	1493
Tsp45I	GTSAC	1 cut(s)	468
TspDTI	ATGAA	5 cut(s)	254, 354, 524, 893, 1643
TspGWI	ACGGA	1 cut(s)	1587
Van91I	CCANNNNNTGG	1 cut(s)	611
VneI	GTGCAC	2 cut(s)	558, 1270
VpaK11BI	GGWCC	3 cut(s)	165, 267, 1406
XagI	CCTNNNNNAGG	2 cut(s)	567, 1005
XapI	RAATTY	4 cut(s)	304, 346, 607, 719
XbaI	TCTAGA	2 cut(s)	377, 1643
XceI	RCATGY	3 cut(s)	467, 707, 1304
XhoI	CTCGAG	2 cut(s)	160, 212
XmiI	GTMKAC	1 cut(s)	853
XspI	CTAG	8 cut(s)	378, 555, 849, 1050, 1386, 1538, 1560, 1644
ZraI	GACGTC	1 cut(s)	204
ZrmI	AGTACT	2 cut(s)	985, 1731

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.