Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0004158

Physical Location & Seq

Genomic Coordinates Reverse (-)

29914448 .. 29918933

Gene Structure 4486 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1205000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1767 bp

ATGGACGCGACCGCACTCGACCATCCCTCGGGACCTTCCGACGACGTCGATCAGGGTCTAACCGACTTCCAACCCGGCTCCGACCCGACCCTTTTCTCTTCTTCTGCTGCTGCTTCCGGTGGGGCCAAGTACAAGCTCATGTCCCCGGCCAAGCTTCCGATCTCGAGGTCCCCCTGCCTCACTATCCCCCACGGCCTCAGTCCGACGTCGTTTCTCGAGTCCCCCGTCCTCCTCTCCAACATGAAGGCAGAACCTTCTCCAACTACGGGGTCCTTTTTGAAGCCTCAAATGGTGTACGGATCTCTAAGTTCTACTACATATTCAACAACAGCAGTTTGCTCTGATTTCAATACCTCAGATGAAAGAAATTCTGGAAGCTTCGAGTTTAAGCCCCATGCTAGATCAAATATGGTTACTACAGATTATAACCACTATGGGAATGAGCAGCCTCTGCAAATCCAAGGTCAAGCTCAGCCTCAATCACAGATGTCACCACCTTTGGCTAAAAATGAGATGGCAGTCTCCTCAAATGAATTAAGTTTATCTGCACCTGTTCACACGGTCACTGCAGGAGCTAGTGCACCTGCTGAAGGTGATTCGGGTGAGTTAACACAGAGGGAACATCCAAATCCTGGGGTCCAAACATCTCAGTGTGATAACAAAGGAAATGGGCCTTCAGTAATATCTTCTGATGATGGGTATAACTGGCGAAAATATGGACAAAAGCACGTTAAAGGGTGTGAATTTCCTCGCAGTTATTACAAATGTACCCATCCTAATTGTGAAGTGAAGAAGCTATTTGAGCGTTCTCATGATGGACAGATAACAGAGATTATCTACAAGGGTACACATGATCATGCTAAGCCTCAACCTAGTCGACGATATAATACTGGTGCTATGATGCCTCCTCAAGAAGAAAGATCTGACAAGGCTTCATCTTTGACTGTTGGAGATGACAAACCATCCGGCATTTATGGGCAAATGTCTAGTAACAATGAGCCAAATAGTACTCCTGAGCTATCTCCTGTCACAGGCAATGATGATAATGTAGAAGGCACAGGCTCACTGTCAAATAGGTTACCTGATGAGGTTGATGATGATGACCCGTTCTCAAAAAGGAGGAGGATGGATGTTGGTGGTATTGATGTCACACCAATTGTTAAGCCTATCCGAGAACCACGAGTTGTTGTTCAGACTCTGAGTGAGGTTGATATATTAGATGATGGATACCGCTGGAGAAAATATGGTCAGAAAGTGGTGAGGGGAAATCCTAATCCAAGCTATTACAAGTGCACCAATGCTGGTTGCCCTGTTAGAAAACATGTGGAGAGGGCATCCCATGATCCAAAAGCAGTTATAACTACATATGAAGGGAAGCATAATCATGATGTCCCAACTGCAAAGACTAGTAGCCATGACACTTCAGGACCTATAACTGTGAATGTCCCGTCGAGGATTAGATCAGAAGAAAGTGACACCATAAGCCTTGATCTTGGTGTTGGAACCACCTCTGGCGGCGAAAATAGATCCAACGATCACCTGCAACTGCACTCTGAACTTGTGGAACGGCAATCTCACACTAATTCCAATTTCAGGGTTGCTCAAAATACCCCTATTTCAACATACTATGGTGTTCTTATTGGTGGCATGAATCAGTATGGATCTAGGGAAAACCCAAGTGAATCACGCAGCATCGAGGTTCCACCTTTAAATCATTCCTCATACCCATATCCACAGAACATGGGAAGGGTGCTAACAGGTCCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0006950 GO:0008150 GO:0009611 GO:0009889 GO:0009891 GO:0009893 GO:0009961 GO:0010033 GO:0010243 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0042221 GO:0043200 GO:0043565 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1901698 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WRKY

Protein Analysis

589

Amino Acids

63.96

Weight (kDa)

5.86

Isoelectric Point (pI)

48.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WRKY	PF03106	231 - 286	2.1e-24	WRKY DNA -binding domain
WRKY	PF03106	407 - 463	2.7e-23	WRKY DNA -binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004158)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26640 AT4G26640 AT4G26640 AT4G26640 AT4G26640 AT4G26640 AT4G26640
fragaria_vesca	FvH4_3g24010 FvH4_3g24010
malus_domestica	MD03G1188900.v1.1 MD11G1205000.v1.1
prunus_persica	Prupe.4G232600_v2.0.a1 Prupe.4G232600_v2.0.a1 Prupe.4G232600_v2.0.a1
pyrus_communis	pycom03g14170 pycom11g17770
rosa_chinensis	RchiOBHm_Chr5g0042581 RchiOBHm_Chr5g0042601
rosa_laevigata	RLG00000034142
rosa_multiflora	Rmu_sc0004704.1_g000005 Rmu_sc0004704.1_g000010 Rmu_sc0012301.1_g000004 Rmu_sc0012301.1_g000009
rosa_roxburghii	Rroxscaffold_1G00038060
rosa_rugosa	Rorug05G0202900 Rorug05G0203000 Rorug05G0203100
rosa_samantha	Rh5AG287900 Rh5AG288300 Rh5BG292300 Rh5CG324700 Rh5DG302100
rosa_wichuraiana	Rw5G026730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	426, 1358
AarI	CACCTGC	2 cut(s)	592, 1548
AatII	GACGTC	2 cut(s)	48, 209
Acc36I	ACCTGC	2 cut(s)	592, 1548
AccB7I	CCANNNNNTGG	1 cut(s)	632
AccI	GTMKAC	1 cut(s)	877
AccII	CGCG	1 cut(s)	8
AciI	CCGC	3 cut(s)	12, 1231, 1515
AclWI	GGATC	4 cut(s)	307, 1337, 1521, 1669
AcoI	YGGCCR	1 cut(s)	147
AcsI	RAATTY	2 cut(s)	367, 743
AcuI	CTGAAG	3 cut(s)	609, 660, 1407
AcyI	GRCGYC	2 cut(s)	45, 206
AfaI	GTAC	5 cut(s)	131, 296, 769, 847, 1009
AfiI	CCNNNNNNNGG	6 cut(s)	28, 266, 590, 632, 1031, 1593
AflIII	ACRYGT	1 cut(s)	1321
AgsI	TTSAA	4 cut(s)	280, 324, 349, 1620
AhlI	ACTAGT	1 cut(s)	1406
AjnI	CCWGG	1 cut(s)	631
AluBI	AGCT	8 cut(s)	136, 154, 378, 470, 575, 796, 1018, 1281
AluI	AGCT	8 cut(s)	136, 154, 378, 470, 575, 796, 1018, 1281
Alw21I	GWGCWC	2 cut(s)	583, 1295
Alw26I	GTCTC	1 cut(s)	526
Alw44I	GTGCAC	2 cut(s)	579, 1291
AlwI	GGATC	4 cut(s)	307, 1337, 1521, 1669
AlwNI	CAGNNNCTG	2 cut(s)	451, 1198
Ama87I	CYCGRG	3 cut(s)	28, 163, 215
AoxI	GGCC	4 cut(s)	123, 147, 193, 671
ApaLI	GTGCAC	2 cut(s)	579, 1291
ApeKI	GCWGC	4 cut(s)	107, 110, 445, 1689
ApoI	RAATTY	2 cut(s)	367, 743
ArsI	GACNNNNNNTTYG	2 cut(s)	448, 480
AspS9I	GGNCC	8 cut(s)	32, 123, 168, 270, 637, 671, 1427, 1760
AsuC2I	CCSGG	2 cut(s)	75, 146
AsuHPI	GGTGA	5 cut(s)	483, 605, 614, 1270, 1529
AvaI	CYCGRG	3 cut(s)	28, 163, 215
AvaII	GGWCC	6 cut(s)	32, 168, 270, 637, 1427, 1760
BaeGI	GKGCMC	2 cut(s)	583, 1295
BaeI	ACNNNNGTAYC	2 cut(s)	751, 784
BauI	CACGAG	1 cut(s)	1179
Bbv12I	GWGCWC	2 cut(s)	583, 1295
BbvI	GCAGC	4 cut(s)	94, 97, 457, 1701
BccI	CCATC	8 cut(s)	30, 508, 689, 780, 809, 970, 1120, 1217
BceAI	ACGGC	2 cut(s)	208, 1583
BciT130I	CCWGG	1 cut(s)	633
BciVI	GTATCC	1 cut(s)	1220
BclI	TGATCA	1 cut(s)	853
BcnI	CCSGG	2 cut(s)	75, 146
BcoDI	GTCTC	1 cut(s)	526
BcuI	ACTAGT	1 cut(s)	1406
BfaI	CTAG	6 cut(s)	399, 576, 873, 987, 1407, 1665
BfmI	CTRYAG	2 cut(s)	417, 567
BfuAI	ACCTGC	2 cut(s)	592, 1548
BfuI	GTATCC	1 cut(s)	1220
BglII	AGATCT	1 cut(s)	920
BisI	GCNGC	5 cut(s)	108, 111, 446, 1516, 1690
BlpI	GCTNAGC	2 cut(s)	471, 861
BlsI	GCNGC	5 cut(s)	109, 112, 447, 1517, 1691
BmcAI	AGTACT	1 cut(s)	1009
Bme1390I	CCNGG	3 cut(s)	75, 146, 633
Bme18I	GGWCC	6 cut(s)	32, 168, 270, 637, 1427, 1760
BmeT110I	CYCGRG	3 cut(s)	28, 163, 215
BmgT120I	GGNCC	8 cut(s)	32, 123, 168, 270, 637, 671, 1427, 1760
BmiI	GGNNCC	8 cut(s)	33, 79, 124, 170, 271, 638, 1504, 1701
BmrFI	CCNGG	3 cut(s)	75, 146, 633
BmsI	GCATC	3 cut(s)	891, 1343, 1701
BpmI	CTGGAG	1 cut(s)	1255
Bpu10I	CCTNAGC	1 cut(s)	1014
Bpu1102I	GCTNAGC	2 cut(s)	471, 861
BpuEI	CTTGAG	1 cut(s)	894
BpuMI	CCSGG	2 cut(s)	75, 146
BsaHI	GRCGYC	2 cut(s)	45, 206
BsaJI	CCNNGG	5 cut(s)	27, 144, 190, 460, 632
BsaWI	WCCGGW	1 cut(s)	116
Bsc4I	CCNNNNNNNGG	6 cut(s)	28, 266, 590, 632, 1031, 1593
Bse1I	ACTGG	2 cut(s)	710, 895
Bse3DI	GCAATG	1 cut(s)	1042
BseBI	CCWGG	1 cut(s)	633
BseDI	CCNNGG	5 cut(s)	27, 144, 190, 460, 632
BseGI	GGATG	7 cut(s)	22, 622, 772, 962, 1131, 1135, 1334
BseLI	CCNNNNNNNGG	6 cut(s)	28, 266, 590, 632, 1031, 1593
BseMI	GCAATG	1 cut(s)	1042
BseMII	CTCAG	6 cut(s)	211, 369, 485, 662, 1005, 1190
BseNI	ACTGG	2 cut(s)	710, 895
BseRI	GAGGAG	4 cut(s)	221, 514, 897, 1135
BseSI	GKGCMC	2 cut(s)	583, 1295
BseXI	GCAGC	4 cut(s)	94, 97, 457, 1701
BsgI	GTGCAG	2 cut(s)	531, 1532
Bsh1236I	CGCG	1 cut(s)	8
Bsh1285I	CGRYCG	1 cut(s)	12
BshFI	GGCC	4 cut(s)	125, 149, 195, 673
BsiEI	CGRYCG	1 cut(s)	12
BsiHKAI	GWGCWC	2 cut(s)	583, 1295
BsiHKCI	CYCGRG	3 cut(s)	28, 163, 215
BsiSI	CCGG	4 cut(s)	75, 117, 146, 966
BslFI	GGGAC	6 cut(s)	45, 127, 154, 205, 1376, 1430
BslI	CCNNNNNNNGG	6 cut(s)	28, 266, 590, 632, 1031, 1593
BsmAI	GTCTC	1 cut(s)	526
BsmFI	GGGAC	6 cut(s)	45, 127, 154, 205, 1376, 1430
BsnI	GGCC	4 cut(s)	125, 149, 195, 673
BsoBI	CYCGRG	3 cut(s)	28, 163, 215
Bsp1286I	GDGCHC	2 cut(s)	583, 1295
Bsp1720I	GCTNAGC	2 cut(s)	471, 861
BspACI	CCGC	3 cut(s)	12, 1231, 1515
BspANI	GGCC	4 cut(s)	125, 149, 195, 673
BspCNI	CTCAG	6 cut(s)	210, 368, 484, 661, 1006, 1191
BspFNI	CGCG	1 cut(s)	8
BspHI	TCATGA	2 cut(s)	811, 1384
BspLI	GGNNCC	8 cut(s)	33, 79, 124, 170, 271, 638, 1504, 1701
BspMAI	CTGCAG	1 cut(s)	571
BspMI	ACCTGC	2 cut(s)	592, 1548
BspPI	GGATC	4 cut(s)	307, 1337, 1521, 1669
BsrDI	GCAATG	1 cut(s)	1042
BsrI	ACTGG	2 cut(s)	710, 895
BssECI	CCNNGG	5 cut(s)	27, 144, 190, 460, 632
BssNI	GRCGYC	2 cut(s)	45, 206
BssSI	CACGAG	1 cut(s)	1179
BssT1I	CCWWGG	1 cut(s)	460
Bst2BI	CACGAG	1 cut(s)	1179
Bst2UI	CCWGG	1 cut(s)	633
Bst4CI	ACNGT	4 cut(s)	562, 946, 1068, 1438
Bst6I	CTCTTC	1 cut(s)	103
BstACI	GRCGYC	2 cut(s)	45, 206
BstAPI	GCANNNNNTGC	1 cut(s)	451
BstDEI	CTNAG	8 cut(s)	197, 305, 355, 471, 648, 861, 1014, 1199
BstDSI	CCRYGG	1 cut(s)	190
BstEII	GGTNACC	1 cut(s)	1077
BstENI	CCTNNNNNAGG	2 cut(s)	588, 1029
BstF5I	GGATG	7 cut(s)	22, 622, 772, 962, 1131, 1135, 1334
BstFNI	CGCG	1 cut(s)	8
BstMAI	GTCTC	1 cut(s)	526
BstMCI	CGRYCG	1 cut(s)	12
BstMWI	GCNNNNNNNGC	2 cut(s)	451, 802
BstNI	CCWGG	1 cut(s)	633
BstNSI	RCATGY	1 cut(s)	1325
BstPI	GGTNACC	1 cut(s)	1077
BstSCI	CCNGG	3 cut(s)	73, 144, 631
BstSFI	CTRYAG	2 cut(s)	417, 567
BstSLI	GKGCMC	2 cut(s)	583, 1295
BstUI	CGCG	1 cut(s)	8
BstV1I	GCAGC	4 cut(s)	94, 97, 457, 1701
BstX2I	RGATCY	4 cut(s)	299, 920, 1526, 1661
BstYI	RGATCY	4 cut(s)	299, 920, 1526, 1661
BsuI	GTATCC	1 cut(s)	1220
BsuRI	GGCC	4 cut(s)	125, 149, 195, 673
BtgI	CCRYGG	1 cut(s)	190
BtsCI	GGATG	7 cut(s)	22, 622, 772, 962, 1131, 1135, 1334
BtsI	GCAGTG	1 cut(s)	564
BtsIMutI	CAGTG	3 cut(s)	564, 656, 1064
BveI	ACCTGC	2 cut(s)	592, 1548
CaiI	CAGNNNCTG	2 cut(s)	451, 1198
CciI	TCATGA	2 cut(s)	811, 1384
Cfr13I	GGNCC	8 cut(s)	32, 123, 168, 270, 637, 671, 1427, 1760
CseI	GACGC	1 cut(s)	14
Csp6I	GTAC	5 cut(s)	130, 295, 768, 846, 1008
CviQI	GTAC	5 cut(s)	130, 295, 768, 846, 1008
DdeI	CTNAG	8 cut(s)	197, 305, 355, 471, 648, 861, 1014, 1199
DraI	TTTAAA	1 cut(s)	1710
EaeI	YGGCCR	1 cut(s)	147
Eam1104I	CTCTTC	1 cut(s)	103
EarI	CTCTTC	1 cut(s)	103
Eco130I	CCWWGG	1 cut(s)	460
Eco47I	GGWCC	6 cut(s)	32, 168, 270, 637, 1427, 1760
Eco57I	CTGAAG	3 cut(s)	609, 660, 1407
Eco88I	CYCGRG	3 cut(s)	28, 163, 215
Eco91I	GGTNACC	1 cut(s)	1077
EcoNI	CCTNNNNNAGG	2 cut(s)	588, 1029
EcoO109I	RGGNCCY	4 cut(s)	32, 168, 270, 1427
EcoO65I	GGTNACC	1 cut(s)	1077
EcoRII	CCWGG	1 cut(s)	631
EcoT14I	CCWWGG	1 cut(s)	460
ErhI	CCWWGG	1 cut(s)	460
FaqI	GGGAC	6 cut(s)	45, 127, 154, 205, 1376, 1430
FauNDI	CATATG	1 cut(s)	1366
FbaI	TGATCA	1 cut(s)	853
FblI	GTMKAC	1 cut(s)	877
Fnu4HI	GCNGC	5 cut(s)	108, 111, 446, 1516, 1690
FokI	GGATG	7 cut(s)	9, 609, 759, 949, 1138, 1142, 1321
Fsp4HI	GCNGC	5 cut(s)	108, 111, 446, 1516, 1690
FspBI	CTAG	6 cut(s)	399, 576, 873, 987, 1407, 1665
GluI	GCNGC	5 cut(s)	108, 111, 446, 1516, 1690
GsuI	CTGGAG	1 cut(s)	1255
HaeIII	GGCC	4 cut(s)	125, 149, 195, 673
HapII	CCGG	4 cut(s)	75, 117, 146, 966
HgaI	GACGC	1 cut(s)	14
Hin1I	GRCGYC	2 cut(s)	45, 206
HincII	GTYRAC	2 cut(s)	609, 878
HindII	GTYRAC	2 cut(s)	609, 878
HindIII	AAGCTT	2 cut(s)	152, 376
HinfI	GANTC	5 cut(s)	218, 596, 1195, 1651, 1682
HpaI	GTTAAC	1 cut(s)	609
HpaII	CCGG	4 cut(s)	75, 117, 146, 966
HphI	GGTGA	5 cut(s)	483, 605, 614, 1270, 1529
Hpy166II	GTNNAC	7 cut(s)	295, 556, 581, 609, 848, 878, 1293
Hpy188III	TCNNGA	9 cut(s)	30, 163, 215, 372, 812, 911, 1013, 1385, 1425
Hpy8I	GTNNAC	7 cut(s)	295, 556, 581, 609, 848, 878, 1293
Hpy99I	CGWCG	7 cut(s)	44, 47, 50, 208, 211, 882, 1453
HpyAV	CCTTC	8 cut(s)	45, 238, 264, 584, 684, 1046, 1364, 1740
HpyCH4III	ACNGT	4 cut(s)	562, 946, 1068, 1438
HpyCH4IV	ACGT	3 cut(s)	45, 206, 729
HpyCH4V	TGCA	8 cut(s)	454, 548, 569, 581, 1293, 1400, 1543, 1549
HpyF10VI	GCNNNNNNNGC	2 cut(s)	451, 802
HpyF3I	CTNAG	8 cut(s)	197, 305, 355, 471, 648, 861, 1014, 1199
HpySE526I	ACGT	3 cut(s)	45, 206, 729
Hsp92I	GRCGYC	2 cut(s)	45, 206
Ksp22I	TGATCA	1 cut(s)	853
KspAI	GTTAAC	1 cut(s)	609
LmnI	GCTCC	2 cut(s)	83, 572
Lsp1109I	GCAGC	4 cut(s)	94, 97, 457, 1701
LweI	GCATC	3 cut(s)	891, 1343, 1701
MaeI	CTAG	6 cut(s)	399, 576, 873, 987, 1407, 1665
MaeII	ACGT	3 cut(s)	45, 206, 729
MaeIII	GTNAC	8 cut(s)	412, 489, 562, 989, 1027, 1077, 1147, 1472
MboII	GAAGA	6 cut(s)	90, 93, 678, 802, 926, 1478
MfeI	CAATTG	1 cut(s)	1155
MflI	RGATCY	4 cut(s)	299, 920, 1526, 1661
MhlI	GDGCHC	2 cut(s)	583, 1295
MluCI	AATT	7 cut(s)	367, 533, 743, 778, 1155, 1582, 1588
MlyI	GAGTC	2 cut(s)	227, 1189
MmeI	TCCRAC	9 cut(s)	63, 94, 105, 227, 261, 284, 928, 1480, 1554
MseI	TTAA	6 cut(s)	387, 536, 608, 732, 1161, 1709
MslI	CAYNNNNRTG	3 cut(s)	649, 855, 1383
MspA1I	CMGCKG	1 cut(s)	1233
MspI	CCGG	4 cut(s)	75, 117, 146, 966
MspR9I	CCNGG	3 cut(s)	75, 146, 633
MunI	CAATTG	1 cut(s)	1155
MvaI	CCWGG	1 cut(s)	633
MvnI	CGCG	1 cut(s)	8
MwoI	GCNNNNNNNGC	2 cut(s)	451, 802
NciI	CCSGG	2 cut(s)	75, 146
NdeI	CATATG	1 cut(s)	1366
NlaIV	GGNNCC	8 cut(s)	33, 79, 124, 170, 271, 638, 1504, 1701
NmuCI	GTSAC	5 cut(s)	489, 562, 1027, 1147, 1472
NspI	RCATGY	1 cut(s)	1325
PaeR7I	CTCGAG	2 cut(s)	163, 215
PagI	TCATGA	2 cut(s)	811, 1384
PaqCI	CACCTGC	2 cut(s)	592, 1548
PciI	ACATGT	1 cut(s)	1321
PcsI	WCGNNNNNNNCGW	1 cut(s)	222
PfeI	GAWTC	3 cut(s)	596, 1651, 1682
PflFI	GACNNNGTC	1 cut(s)	44
PflMI	CCANNNNNTGG	1 cut(s)	632
PkrI	GCNGC	5 cut(s)	109, 112, 447, 1517, 1691
PleI	GAGTC	2 cut(s)	226, 1189
PpsI	GAGTC	2 cut(s)	226, 1189
PpuMI	RGGWCCY	4 cut(s)	32, 168, 270, 1427
PscI	ACATGT	1 cut(s)	1321
PsiI	TTATAA	2 cut(s)	426, 1358
Psp5II	RGGWCCY	4 cut(s)	32, 168, 270, 1427
Psp6I	CCWGG	1 cut(s)	631
PspEI	GGTNACC	1 cut(s)	1077
PspGI	CCWGG	1 cut(s)	631
PspN4I	GGNNCC	8 cut(s)	33, 79, 124, 170, 271, 638, 1504, 1701
PspPI	GGNCC	8 cut(s)	32, 123, 168, 270, 637, 671, 1427, 1760
PspPPI	RGGWCCY	4 cut(s)	32, 168, 270, 1427
PstI	CTGCAG	1 cut(s)	571
PstNI	CAGNNNCTG	2 cut(s)	451, 1198
PsuI	RGATCY	4 cut(s)	299, 920, 1526, 1661
PsyI	GACNNNGTC	1 cut(s)	44
RsaI	GTAC	5 cut(s)	131, 296, 769, 847, 1009
RsaNI	GTAC	5 cut(s)	130, 295, 768, 846, 1008
RseI	CAYNNNNRTG	3 cut(s)	649, 855, 1383
SalI	GTCGAC	1 cut(s)	876
SaqAI	TTAA	6 cut(s)	387, 536, 608, 732, 1161, 1709
SatI	GCNGC	5 cut(s)	108, 111, 446, 1516, 1690
Sau96I	GGNCC	8 cut(s)	32, 123, 168, 270, 637, 671, 1427, 1760
ScaI	AGTACT	1 cut(s)	1009
SchI	GAGTC	2 cut(s)	227, 1189
ScrFI	CCNGG	3 cut(s)	75, 146, 633
SduI	GDGCHC	2 cut(s)	583, 1295
SfaNI	GCATC	3 cut(s)	891, 1343, 1701
SfcI	CTRYAG	2 cut(s)	417, 567
Sfr274I	CTCGAG	2 cut(s)	163, 215
SinI	GGWCC	6 cut(s)	32, 168, 270, 637, 1427, 1760
SlaI	CTCGAG	2 cut(s)	163, 215
SmiMI	CAYNNNNRTG	3 cut(s)	649, 855, 1383
SmlI	CTYRAG	3 cut(s)	163, 215, 909
SmoI	CTYRAG	3 cut(s)	163, 215, 909
SpeI	ACTAGT	1 cut(s)	1406
Sse9I	AATT	7 cut(s)	367, 533, 743, 778, 1155, 1582, 1588
SsiI	CCGC	3 cut(s)	12, 1231, 1515
SspMI	CTAG	6 cut(s)	399, 576, 873, 987, 1407, 1665
StyD4I	CCNGG	3 cut(s)	73, 144, 631
StyI	CCWWGG	1 cut(s)	460
TaaI	ACNGT	4 cut(s)	562, 946, 1068, 1438
TaiI	ACGT	3 cut(s)	48, 209, 732
TaqI	TCGA	8 cut(s)	18, 48, 164, 216, 381, 877, 1451, 1695
TasI	AATT	7 cut(s)	367, 533, 743, 778, 1155, 1582, 1588
TatI	WGTACW	2 cut(s)	129, 1007
TauI	GCSGC	1 cut(s)	1518
TfiI	GAWTC	3 cut(s)	596, 1651, 1682
Tru1I	TTAA	6 cut(s)	387, 536, 608, 732, 1161, 1709
Tru9I	TTAA	6 cut(s)	387, 536, 608, 732, 1161, 1709
TscAI	CASTG	3 cut(s)	571, 656, 1071
TseFI	GTSAC	5 cut(s)	489, 562, 1027, 1147, 1472
TseI	GCWGC	4 cut(s)	107, 110, 445, 1689
Tsp45I	GTSAC	5 cut(s)	489, 562, 1027, 1147, 1472
TspDTI	ATGAA	6 cut(s)	257, 375, 546, 924, 1383, 1664
TspGWI	ACGGA	2 cut(s)	312, 1752
TspRI	CASTG	3 cut(s)	571, 656, 1071
Tth111I	GACNNNGTC	1 cut(s)	44
Van91I	CCANNNNNTGG	1 cut(s)	632
VneI	GTGCAC	2 cut(s)	579, 1291
VpaK11BI	GGWCC	6 cut(s)	32, 168, 270, 637, 1427, 1760
XagI	CCTNNNNNAGG	2 cut(s)	588, 1029
XapI	RAATTY	2 cut(s)	367, 743
XceI	RCATGY	1 cut(s)	1325
XhoI	CTCGAG	2 cut(s)	163, 215
XmiI	GTMKAC	1 cut(s)	877
XspI	CTAG	6 cut(s)	399, 576, 873, 987, 1407, 1665
ZraI	GACGTC	2 cut(s)	46, 207
ZrmI	AGTACT	1 cut(s)	1009

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.