WRKY transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G26640 AT4G26640 AT4G26640 AT4G26640 AT4G26640 AT4G26640 AT4G26640 |
| fragaria_vesca | FvH4_3g24010 FvH4_3g24010 |
| malus_domestica | MD03G1188900.v1.1 MD11G1205000.v1.1 |
| prunus_persica | Prupe.4G232600_v2.0.a1 Prupe.4G232600_v2.0.a1 Prupe.4G232600_v2.0.a1 |
| pyrus_communis | pycom03g14170 pycom11g17770 |
| rosa_chinensis | RchiOBHm_Chr5g0042581 RchiOBHm_Chr5g0042601 |
| rosa_laevigata | RLG00000034142 |
| rosa_multiflora | Rmu_sc0004704.1_g000005 Rmu_sc0004704.1_g000010 Rmu_sc0012301.1_g000004 Rmu_sc0012301.1_g000009 |
| rosa_roxburghii | Rroxscaffold_1G00038060 |
| rosa_rugosa | Rorug05G0202900 Rorug05G0203000 Rorug05G0203100 |
| rosa_samantha | Rh5AG287900 Rh5AG288300 Rh5BG292300 Rh5CG324700 Rh5DG302100 |
| rosa_wichuraiana | Rw5G026730 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 977 |
| AarI | CACCTGC | 1 cut(s) | 1167 |
| Acc36I | ACCTGC | 1 cut(s) | 1167 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 251 |
| AccI | GTMKAC | 1 cut(s) | 493 |
| AccIII | TCCGGA | 1 cut(s) | 628 |
| AciI | CCGC | 5 cut(s) | 43, 218, 847, 920, 1017 |
| AclWI | GGATC | 3 cut(s) | 956, 1140, 1288 |
| AcoI | YGGCCR | 1 cut(s) | 562 |
| AcsI | RAATTY | 2 cut(s) | 247, 359 |
| AcuI | CTGAAG | 1 cut(s) | 279 |
| AfaI | GTAC | 4 cut(s) | 463, 607, 625, 1371 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 209, 251, 647, 1071 |
| AgeI | ACCGGT | 1 cut(s) | 506 |
| AgsI | TTSAA | 4 cut(s) | 209, 668, 809, 1223 |
| AhlI | ACTAGT | 1 cut(s) | 1025 |
| AjnI | CCWGG | 1 cut(s) | 525 |
| AluBI | AGCT | 5 cut(s) | 167, 194, 634, 900, 1128 |
| AluI | AGCT | 5 cut(s) | 167, 194, 634, 900, 1128 |
| Alw21I | GWGCWC | 3 cut(s) | 202, 914, 1130 |
| Alw26I | GTCTC | 2 cut(s) | 99, 187 |
| Alw44I | GTGCAC | 2 cut(s) | 198, 910 |
| AlwI | GGATC | 3 cut(s) | 956, 1140, 1288 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 170 |
| Aor13HI | TCCGGA | 1 cut(s) | 628 |
| AoxI | GGCC | 2 cut(s) | 290, 562 |
| ApaLI | GTGCAC | 2 cut(s) | 198, 910 |
| ApoI | RAATTY | 2 cut(s) | 247, 359 |
| AsiGI | ACCGGT | 1 cut(s) | 506 |
| AspLEI | GCGC | 1 cut(s) | 855 |
| AspS9I | GGNCC | 3 cut(s) | 290, 1046, 1379 |
| AsuC2I | CCSGG | 1 cut(s) | 788 |
| AsuHPI | GGTGA | 5 cut(s) | 102, 224, 464, 1148, 1187 |
| AvaII | GGWCC | 2 cut(s) | 1046, 1379 |
| BaeGI | GKGCMC | 2 cut(s) | 202, 914 |
| BanII | GRGCYC | 1 cut(s) | 1130 |
| BauI | CACGAG | 1 cut(s) | 795 |
| Bbv12I | GWGCWC | 3 cut(s) | 202, 914, 1130 |
| BccI | CCATC | 5 cut(s) | 127, 305, 650, 736, 833 |
| BciT130I | CCWGG | 1 cut(s) | 527 |
| BciVI | GTATCC | 1 cut(s) | 836 |
| BclI | TGATCA | 2 cut(s) | 274, 469 |
| BcnI | CCSGG | 1 cut(s) | 788 |
| BcoDI | GTCTC | 2 cut(s) | 99, 187 |
| BcuI | ACTAGT | 1 cut(s) | 1025 |
| BfaI | CTAG | 8 cut(s) | 195, 489, 582, 690, 1026, 1178, 1200, 1284 |
| BfuAI | ACCTGC | 1 cut(s) | 1167 |
| BfuI | GTATCC | 1 cut(s) | 836 |
| BglII | AGATCT | 1 cut(s) | 536 |
| BmcAI | AGTACT | 2 cut(s) | 625, 1371 |
| Bme1390I | CCNGG | 2 cut(s) | 527, 788 |
| Bme18I | GGWCC | 2 cut(s) | 1046, 1379 |
| BmgT120I | GGNCC | 3 cut(s) | 290, 1046, 1379 |
| BmiI | GGNNCC | 3 cut(s) | 142, 792, 1047 |
| BmrFI | CCNGG | 2 cut(s) | 527, 788 |
| BmsI | GCATC | 4 cut(s) | 205, 914, 962, 1320 |
| Bpu10I | CCTNAGC | 1 cut(s) | 477 |
| BpuMI | CCSGG | 1 cut(s) | 788 |
| BsaAI | YACGTR | 1 cut(s) | 1307 |
| BsaI | GGTCTC | 1 cut(s) | 187 |
| BsaJI | CCNNGG | 2 cut(s) | 73, 893 |
| BsaWI | WCCGGW | 2 cut(s) | 506, 628 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1219, 1249 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 209, 251, 647, 1071 |
| Bse118I | RCCGGY | 1 cut(s) | 506 |
| Bse1I | ACTGG | 5 cut(s) | 21, 326, 565, 679, 770 |
| Bse3DI | GCAATG | 1 cut(s) | 58 |
| BseAI | TCCGGA | 1 cut(s) | 628 |
| BseBI | CCWGG | 1 cut(s) | 527 |
| BseDI | CCNNGG | 2 cut(s) | 73, 893 |
| BseGI | GGATG | 7 cut(s) | 226, 388, 747, 751, 841, 929, 953 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 209, 251, 647, 1071 |
| BseMI | GCAATG | 1 cut(s) | 58 |
| BseMII | CTCAG | 1 cut(s) | 806 |
| BseNI | ACTGG | 5 cut(s) | 21, 326, 565, 679, 770 |
| BseRI | GAGGAG | 2 cut(s) | 133, 751 |
| BseSI | GKGCMC | 2 cut(s) | 202, 914 |
| BshFI | GGCC | 2 cut(s) | 292, 564 |
| BshTI | ACCGGT | 1 cut(s) | 506 |
| BsiHKAI | GWGCWC | 3 cut(s) | 202, 914, 1130 |
| BsiSI | CCGG | 3 cut(s) | 507, 629, 787 |
| BslFI | GGGAC | 3 cut(s) | 447, 995, 1059 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 209, 251, 647, 1071 |
| BsmAI | GTCTC | 2 cut(s) | 99, 187 |
| BsmFI | GGGAC | 3 cut(s) | 447, 995, 1059 |
| BsmI | GAATGC | 1 cut(s) | 1066 |
| BsnI | GGCC | 2 cut(s) | 292, 564 |
| Bso31I | GGTCTC | 1 cut(s) | 187 |
| Bsp1286I | GDGCHC | 3 cut(s) | 202, 914, 1130 |
| Bsp13I | TCCGGA | 1 cut(s) | 628 |
| Bsp143I | GATC | 8 cut(s) | 274, 422, 469, 536, 961, 1108, 1145, 1280 |
| BspACI | CCGC | 5 cut(s) | 43, 218, 847, 920, 1017 |
| BspANI | GGCC | 2 cut(s) | 292, 564 |
| BspCNI | CTCAG | 1 cut(s) | 807 |
| BspEI | TCCGGA | 1 cut(s) | 628 |
| BspHI | TCATGA | 2 cut(s) | 427, 1003 |
| BspLI | GGNNCC | 3 cut(s) | 142, 792, 1047 |
| BspMI | ACCTGC | 1 cut(s) | 1167 |
| BspPI | GGATC | 3 cut(s) | 956, 1140, 1288 |
| BspTNI | GGTCTC | 1 cut(s) | 187 |
| BsrDI | GCAATG | 1 cut(s) | 58 |
| BsrFI | RCCGGY | 1 cut(s) | 506 |
| BsrI | ACTGG | 5 cut(s) | 21, 326, 565, 679, 770 |
| BssAI | RCCGGY | 1 cut(s) | 506 |
| BssECI | CCNNGG | 2 cut(s) | 73, 893 |
| BssMI | GATC | 8 cut(s) | 274, 422, 469, 536, 961, 1108, 1145, 1280 |
| BssSI | CACGAG | 1 cut(s) | 795 |
| BssT1I | CCWWGG | 2 cut(s) | 73, 893 |
| Bst2BI | CACGAG | 1 cut(s) | 795 |
| Bst2UI | CCWGG | 1 cut(s) | 527 |
| Bst4CI | ACNGT | 4 cut(s) | 270, 398, 414, 1057 |
| Bst6I | CTCTTC | 1 cut(s) | 1360 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 64 |
| BstBAI | YACGTR | 1 cut(s) | 1307 |
| BstC8I | GCNNGC | 3 cut(s) | 60, 139, 851 |
| BstDEI | CTNAG | 2 cut(s) | 477, 815 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 207, 645 |
| BstF5I | GGATG | 7 cut(s) | 226, 388, 747, 751, 841, 929, 953 |
| BstHHI | GCGC | 1 cut(s) | 855 |
| BstKTI | GATC | 8 cut(s) | 277, 425, 472, 539, 964, 1111, 1148, 1283 |
| BstMAI | GTCTC | 2 cut(s) | 99, 187 |
| BstMBI | GATC | 8 cut(s) | 274, 422, 469, 536, 961, 1108, 1145, 1280 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 64 |
| BstNI | CCWGG | 1 cut(s) | 527 |
| BstNSI | RCATGY | 2 cut(s) | 347, 944 |
| BstSCI | CCNGG | 2 cut(s) | 525, 786 |
| BstSLI | GKGCMC | 2 cut(s) | 202, 914 |
| BstX2I | RGATCY | 3 cut(s) | 536, 1145, 1280 |
| BstYI | RGATCY | 3 cut(s) | 536, 1145, 1280 |
| BsuI | GTATCC | 1 cut(s) | 836 |
| BsuRI | GGCC | 2 cut(s) | 292, 564 |
| BtsCI | GGATG | 7 cut(s) | 226, 388, 747, 751, 841, 929, 953 |
| BveI | ACCTGC | 1 cut(s) | 1167 |
| Cac8I | GCNNGC | 3 cut(s) | 60, 139, 851 |
| CaiI | CAGNNNCTG | 1 cut(s) | 170 |
| CciI | TCATGA | 2 cut(s) | 427, 1003 |
| CfoI | GCGC | 1 cut(s) | 855 |
| Cfr10I | RCCGGY | 1 cut(s) | 506 |
| Cfr13I | GGNCC | 3 cut(s) | 290, 1046, 1379 |
| CseI | GACGC | 1 cut(s) | 96 |
| Csp6I | GTAC | 4 cut(s) | 462, 606, 624, 1370 |
| CspAI | ACCGGT | 1 cut(s) | 506 |
| CviAII | CATG | 9 cut(s) | 344, 428, 467, 941, 959, 1004, 1034, 1267, 1360 |
| CviQI | GTAC | 4 cut(s) | 462, 606, 624, 1370 |
| DdeI | CTNAG | 2 cut(s) | 477, 815 |
| DpnI | GATC | 8 cut(s) | 276, 424, 471, 538, 963, 1110, 1147, 1282 |
| DpnII | GATC | 8 cut(s) | 274, 422, 469, 536, 961, 1108, 1145, 1280 |
| DraI | TTTAAA | 2 cut(s) | 1257, 1329 |
| EaeI | YGGCCR | 1 cut(s) | 562 |
| Eam1104I | CTCTTC | 1 cut(s) | 1360 |
| EarI | CTCTTC | 1 cut(s) | 1360 |
| Ecl136II | GAGCTC | 1 cut(s) | 1128 |
| Eco130I | CCWWGG | 2 cut(s) | 73, 893 |
| Eco24I | GRGCYC | 1 cut(s) | 1130 |
| Eco31I | GGTCTC | 1 cut(s) | 187 |
| Eco47I | GGWCC | 2 cut(s) | 1046, 1379 |
| Eco53kI | GAGCTC | 1 cut(s) | 1128 |
| Eco57I | CTGAAG | 1 cut(s) | 279 |
| EcoICRI | GAGCTC | 1 cut(s) | 1128 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 207, 645 |
| EcoRII | CCWGG | 1 cut(s) | 525 |
| EcoT14I | CCWWGG | 2 cut(s) | 73, 893 |
| EcoT38I | GRGCYC | 1 cut(s) | 1130 |
| ErhI | CCWWGG | 2 cut(s) | 73, 893 |
| FaeI | CATG | 9 cut(s) | 347, 431, 470, 944, 962, 1007, 1037, 1270, 1363 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 277, 309 |
| FaqI | GGGAC | 3 cut(s) | 447, 995, 1059 |
| FatI | CATG | 9 cut(s) | 343, 427, 466, 940, 958, 1003, 1033, 1266, 1359 |
| FauI | CCCGC | 1 cut(s) | 913 |
| FauNDI | CATATG | 2 cut(s) | 177, 985 |
| FbaI | TGATCA | 2 cut(s) | 274, 469 |
| FblI | GTMKAC | 1 cut(s) | 493 |
| FokI | GGATG | 7 cut(s) | 233, 375, 754, 758, 848, 936, 940 |
| FriOI | GRGCYC | 1 cut(s) | 1130 |
| FspBI | CTAG | 8 cut(s) | 195, 489, 582, 690, 1026, 1178, 1200, 1284 |
| GlaI | GCGC | 1 cut(s) | 854 |
| HaeIII | GGCC | 2 cut(s) | 292, 564 |
| HapII | CCGG | 3 cut(s) | 507, 629, 787 |
| HgaI | GACGC | 1 cut(s) | 96 |
| HhaI | GCGC | 1 cut(s) | 855 |
| Hin1II | CATG | 9 cut(s) | 347, 431, 470, 944, 962, 1007, 1037, 1270, 1363 |
| Hin6I | GCGC | 1 cut(s) | 853 |
| HinP1I | GCGC | 1 cut(s) | 853 |
| HincII | GTYRAC | 1 cut(s) | 494 |
| HindII | GTYRAC | 1 cut(s) | 494 |
| HinfI | GANTC | 3 cut(s) | 1270, 1301, 1318 |
| HpaII | CCGG | 3 cut(s) | 507, 629, 787 |
| HphI | GGTGA | 5 cut(s) | 102, 224, 464, 1148, 1187 |
| Hpy166II | GTNNAC | 4 cut(s) | 200, 464, 494, 912 |
| Hpy188I | TCNGA | 7 cut(s) | 234, 307, 541, 647, 816, 867, 1174 |
| Hpy188III | TCNNGA | 8 cut(s) | 156, 189, 428, 629, 1004, 1044, 1284, 1315 |
| Hpy8I | GTNNAC | 4 cut(s) | 200, 464, 494, 912 |
| Hpy99I | CGWCG | 1 cut(s) | 498 |
| HpyAV | CCTTC | 4 cut(s) | 203, 303, 662, 1077 |
| HpyCH4III | ACNGT | 4 cut(s) | 270, 398, 414, 1057 |
| HpyCH4IV | ACGT | 1 cut(s) | 1306 |
| HpyCH4V | TGCA | 5 cut(s) | 67, 200, 384, 912, 1168 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 64 |
| HpyF3I | CTNAG | 2 cut(s) | 477, 815 |
| HpySE526I | ACGT | 1 cut(s) | 1306 |
| Hsp92II | CATG | 9 cut(s) | 347, 431, 470, 944, 962, 1007, 1037, 1270, 1363 |
| HspAI | GCGC | 1 cut(s) | 853 |
| Kpn2I | TCCGGA | 1 cut(s) | 628 |
| Ksp22I | TGATCA | 2 cut(s) | 274, 469 |
| Kzo9I | GATC | 8 cut(s) | 274, 422, 469, 536, 961, 1108, 1145, 1280 |
| LmnI | GCTCC | 6 cut(s) | 146, 172, 191, 631, 897, 1240 |
| LweI | GCATC | 4 cut(s) | 205, 914, 962, 1320 |
| MaeI | CTAG | 8 cut(s) | 195, 489, 582, 690, 1026, 1178, 1200, 1284 |
| MaeII | ACGT | 1 cut(s) | 1306 |
| MaeIII | GTNAC | 3 cut(s) | 25, 108, 763 |
| MalI | GATC | 8 cut(s) | 276, 424, 471, 538, 963, 1110, 1147, 1282 |
| MboI | GATC | 8 cut(s) | 274, 422, 469, 536, 961, 1108, 1145, 1280 |
| MboII | GAAGA | 5 cut(s) | 294, 418, 542, 1329, 1377 |
| MflI | RGATCY | 3 cut(s) | 536, 1145, 1280 |
| MhlI | GDGCHC | 3 cut(s) | 202, 914, 1130 |
| MluCI | AATT | 4 cut(s) | 247, 359, 756, 1207 |
| MmeI | TCCRAC | 2 cut(s) | 1099, 1173 |
| MroI | TCCGGA | 1 cut(s) | 628 |
| MseI | TTAA | 7 cut(s) | 9, 123, 348, 777, 1212, 1256, 1328 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1002 |
| MspA1I | CMGCKG | 1 cut(s) | 849 |
| MspI | CCGG | 3 cut(s) | 507, 629, 787 |
| MspR9I | CCNGG | 2 cut(s) | 527, 788 |
| Mva1269I | GAATGC | 1 cut(s) | 1066 |
| MvaI | CCWGG | 1 cut(s) | 527 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 64 |
| NciI | CCSGG | 1 cut(s) | 788 |
| NdeI | CATATG | 2 cut(s) | 177, 985 |
| NdeII | GATC | 8 cut(s) | 274, 422, 469, 536, 961, 1108, 1145, 1280 |
| NlaIII | CATG | 9 cut(s) | 347, 431, 470, 944, 962, 1007, 1037, 1270, 1363 |
| NlaIV | GGNNCC | 3 cut(s) | 142, 792, 1047 |
| NmeAIII | GCCGAG | 1 cut(s) | 590 |
| NmuCI | GTSAC | 1 cut(s) | 108 |
| NspI | RCATGY | 2 cut(s) | 347, 944 |
| PagI | TCATGA | 2 cut(s) | 427, 1003 |
| PaqCI | CACCTGC | 1 cut(s) | 1167 |
| PctI | GAATGC | 1 cut(s) | 1066 |
| PfeI | GAWTC | 3 cut(s) | 1270, 1301, 1318 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 251 |
| PfoI | TCCNGGA | 2 cut(s) | 525, 786 |
| PinAI | ACCGGT | 1 cut(s) | 506 |
| Ppu21I | YACGTR | 1 cut(s) | 1307 |
| PsiI | TTATAA | 1 cut(s) | 977 |
| Psp124BI | GAGCTC | 1 cut(s) | 1130 |
| Psp6I | CCWGG | 1 cut(s) | 525 |
| PspGI | CCWGG | 1 cut(s) | 525 |
| PspN4I | GGNNCC | 3 cut(s) | 142, 792, 1047 |
| PspPI | GGNCC | 3 cut(s) | 290, 1046, 1379 |
| PstNI | CAGNNNCTG | 1 cut(s) | 170 |
| PsuI | RGATCY | 3 cut(s) | 536, 1145, 1280 |
| RsaI | GTAC | 4 cut(s) | 463, 607, 625, 1371 |
| RsaNI | GTAC | 4 cut(s) | 462, 606, 624, 1370 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1002 |
| SacI | GAGCTC | 1 cut(s) | 1130 |
| SalI | GTCGAC | 1 cut(s) | 492 |
| SaqAI | TTAA | 7 cut(s) | 9, 123, 348, 777, 1212, 1256, 1328 |
| Sau3AI | GATC | 8 cut(s) | 274, 422, 469, 536, 961, 1108, 1145, 1280 |
| Sau96I | GGNCC | 3 cut(s) | 290, 1046, 1379 |
| ScaI | AGTACT | 2 cut(s) | 625, 1371 |
| ScrFI | CCNGG | 2 cut(s) | 527, 788 |
| SduI | GDGCHC | 3 cut(s) | 202, 914, 1130 |
| SfaNI | GCATC | 4 cut(s) | 205, 914, 962, 1320 |
| SinI | GGWCC | 2 cut(s) | 1046, 1379 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1002 |
| SpeI | ACTAGT | 1 cut(s) | 1025 |
| Sse9I | AATT | 4 cut(s) | 247, 359, 756, 1207 |
| SsiI | CCGC | 5 cut(s) | 43, 218, 847, 920, 1017 |
| SspMI | CTAG | 8 cut(s) | 195, 489, 582, 690, 1026, 1178, 1200, 1284 |
| SstI | GAGCTC | 1 cut(s) | 1130 |
| StyD4I | CCNGG | 2 cut(s) | 525, 786 |
| StyI | CCWWGG | 2 cut(s) | 73, 893 |
| TaaI | ACNGT | 4 cut(s) | 270, 398, 414, 1057 |
| TaiI | ACGT | 1 cut(s) | 1309 |
| TaqI | TCGA | 4 cut(s) | 493, 699, 1070, 1314 |
| TasI | AATT | 4 cut(s) | 247, 359, 756, 1207 |
| TatI | WGTACW | 2 cut(s) | 623, 1369 |
| TfiI | GAWTC | 3 cut(s) | 1270, 1301, 1318 |
| Tru1I | TTAA | 7 cut(s) | 9, 123, 348, 777, 1212, 1256, 1328 |
| Tru9I | TTAA | 7 cut(s) | 9, 123, 348, 777, 1212, 1256, 1328 |
| TseFI | GTSAC | 1 cut(s) | 108 |
| Tsp45I | GTSAC | 1 cut(s) | 108 |
| TspDTI | ATGAA | 3 cut(s) | 164, 533, 1283 |
| TspGWI | ACGGA | 2 cut(s) | 47, 1227 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 251 |
| VneI | GTGCAC | 2 cut(s) | 198, 910 |
| VpaK11BI | GGWCC | 2 cut(s) | 1046, 1379 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 207, 645 |
| XapI | RAATTY | 2 cut(s) | 247, 359 |
| XbaI | TCTAGA | 1 cut(s) | 1283 |
| XceI | RCATGY | 2 cut(s) | 347, 944 |
| XmiI | GTMKAC | 1 cut(s) | 493 |
| XspI | CTAG | 8 cut(s) | 195, 489, 582, 690, 1026, 1178, 1200, 1284 |
| ZrmI | AGTACT | 2 cut(s) | 625, 1371 |