Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0004158

Physical Location & Seq

Genomic Coordinates Forward (+)

35933404 .. 35938276

Gene Structure 4873 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG324700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2028 bp

ATGGTGATTAACCACCGGAAAAACGTCAAAAAGGAGTCACCCGGACTCAGATCCAGTGCAGCAAGTCAACTCACGTCTCTCTCTCTCTCTGACAACACAACCTTCCAAAACACAGCAAACAGACTCCGAAATGACCCTTTTACCCTTCCCTCCTCTTCCCTCTGTTCTAAACAGCAAAGAAAAAAAGCCAAAGTAGTAAACCACCCCCCCCCCCCCCCTTCCACTCTCTCTTTCTCTATCTCCCAAACCCAGCCGATGGACTCGACCGCACCGGAATGCCCCCCGCCTCCCTCCGACGAACTCGATCCGGGCCTCACCGACTTCCATCCAGGCTCCGACCCGGCCTTCTCCACCTCCCGTTCCAGCGGTGGGGCCAAGTACAAGCTCATGTCGCCGGCGAAGCTCCCGATCTCGAGGTCCCCCTGCCTCACTATCCCTCCCGGCCTCACTCCGACGTCGTTTCTCGAGTCCCCGGTGCTCCTCTCCAACATGAAGGCAGAACCTTCTCCAACTACCGGGTCCTTTTTGAATCCTAAAATGGTCTATGGGACTGCAAATTCTACATATTCAGCAACCATGGTTTGCTCTGATGAAAGAAATTCTGGAAGCTTTGAGTTTAAGCCCCATTCTAGATTGAATATGGTTACTACGGATTATGACCACCACAGCAATGAGCAGGCTGTGCAAGTCCAAGGTCAAGGTCAAGGTCAAGGTCAGGGTCAGGGTCAGGGTCAGTCTCAATCACTTGTGTCACCACCTTTGGTTAAGAATGAGATGGCAGGCTCCTCAAATCAATCGGGATTACCAGCTCCGGTTCATATGGTCTCGTCAGGAGCTAGTGCACCTGTTGAAGGTGATGCAGATGATATAAGTCAGAGGGGAAATCCAAATTCTGGTGTCCAAACATCACAGTTTGATCATAAAGGAAGTGGGCCTTCAGTATCTTCTGATGATGGCTATAACTGGCGAAAATATGGACAAAAACATGTTAAAGGAAGTGAATTTCCTCGCAGTTATTACAAATGCACACATCCCAACTGTGAAGTGAAGAAGCTGTTTGAGCGATCTCATGAGGGATATATAACAGAGATTATCTACAAGGGTACACATGATCACCCTAAGCCTCAACCTAGTCGACGATATAATACTGGAGCTATGATGAATGTCCAGGAAGAAAGATCCGACAAGGTTTTATCTTTGACTGGCCGAGATGACAAGTCATCCAGTATGTATGGGCAAATGTCTAGTACCAATGAGCCAAATAGTACTCCTGAGCTATCCCCTGTCAGAGGAAATGATGGTAGTGTTGAAGGAACAGGCTCACTATCAACTAGAATACTCGATGAGGTCGATGATGATGACCCATTCTCTAAAAGGAGGAGGATGGATGTTGGTGGAATTGATGTTACACCAGTTGTTAAGCCTATCCGGGAACCACGAGTTGTTGTTCAAACTCTGAGTGAGGTTGATATATTGGATGATGGATACCGCTGGCGCAAATATGGTCAGAAAGTTGTGAGGGGAAATCCTAATCCAAGGAGCTATTACAAGTGCACAAATGCTGGATGCCCTGTTAGGAAGCATGTGGAGAGGGCATCCCATGATCCAAAAGCAGTTATAACTACATACGAGGGAAAACATAATCATGATGTCCCAACCGCAAGGACTAGTAGCCATGACACTTCGGGACCAACAACCGTGAATGCCCCTTCAAGGAATCGAACAGAGGAAAATGACACCATAAGCCTTGATCTTGGTGTTGGAATGAGCTCTGCTGCTGAAAATAGATCCAACAATCACCTGCGATTGCACTCTGAACTAGCAGAAAGACAAACTCACCCTAGTTCCAATTTTAAGGCTGTTCAAACTACCCCTGCTCCGTCATACTACGGTGTTTTAACTAGTGGCATGAATCAGTATGGATCTAGAGAAAATCCAAGTGAATCACGTAGCATCGAGATTCAACCTTTAAACCATTCTTCTTACCCATATCCACAGAACATGGGAAGAGTACTAACAGGTCCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0006950 GO:0008150 GO:0009611 GO:0009889 GO:0009891 GO:0009893 GO:0009961 GO:0010033 GO:0010243 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0042221 GO:0043200 GO:0043565 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1901698 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WRKY

Protein Analysis

675

Amino Acids

73.57

Weight (kDa)

8.42

Isoelectric Point (pI)

53.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WRKY	PF03106	317 - 373	1.5e-24	WRKY DNA -binding domain
WRKY	PF03106	493 - 550	1.5e-26	WRKY DNA -binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004158)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26640 AT4G26640 AT4G26640 AT4G26640 AT4G26640 AT4G26640 AT4G26640
fragaria_vesca	FvH4_3g24010 FvH4_3g24010
malus_domestica	MD03G1188900.v1.1 MD11G1205000.v1.1
prunus_persica	Prupe.4G232600_v2.0.a1 Prupe.4G232600_v2.0.a1 Prupe.4G232600_v2.0.a1
pyrus_communis	pycom03g14170 pycom11g17770
rosa_chinensis	RchiOBHm_Chr5g0042581 RchiOBHm_Chr5g0042601
rosa_laevigata	RLG00000034142
rosa_multiflora	Rmu_sc0004704.1_g000005 Rmu_sc0004704.1_g000010 Rmu_sc0012301.1_g000004 Rmu_sc0012301.1_g000009
rosa_roxburghii	Rroxscaffold_1G00038060
rosa_rugosa	Rorug05G0202900 Rorug05G0203000 Rorug05G0203100
rosa_samantha	Rh5AG287900 Rh5AG288300 Rh5BG292300 Rh5CG324700 Rh5DG302100
rosa_wichuraiana	Rw5G026730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1619
AarI	CACCTGC	1 cut(s)	1809
AatII	GACGTC	1 cut(s)	458
Acc36I	ACCTGC	1 cut(s)	1809
AccB7I	CCANNNNNTGG	2 cut(s)	256, 893
AccI	GTMKAC	1 cut(s)	1135
AciI	CCGC	5 cut(s)	267, 284, 366, 1489, 1659
AclWI	GGATC	6 cut(s)	45, 299, 1173, 1598, 1782, 1930
AcoI	YGGCCR	1 cut(s)	1204
AcsI	RAATTY	4 cut(s)	556, 598, 889, 1001
AcuI	CTGAAG	1 cut(s)	921
AcyI	GRCGYC	1 cut(s)	455
AfaI	GTAC	5 cut(s)	380, 1105, 1249, 1267, 2013
AfiI	CCNNNNNNNGG	7 cut(s)	256, 369, 515, 851, 893, 1289, 1713
AflIII	ACRYGT	1 cut(s)	985
AgsI	TTSAA	8 cut(s)	529, 637, 851, 1310, 1451, 1713, 1865, 1964
AhlI	ACTAGT	2 cut(s)	1667, 1901
AjiI	CACGTC	1 cut(s)	75
AjnI	CCWGG	2 cut(s)	328, 1167
Alw21I	GWGCWC	4 cut(s)	480, 844, 1556, 1772
Alw26I	GTCTC	3 cut(s)	81, 741, 829
Alw44I	GTGCAC	2 cut(s)	840, 1552
AlwI	GGATC	6 cut(s)	45, 299, 1173, 1598, 1782, 1930
Ama87I	CYCGRG	2 cut(s)	412, 464
AoxI	GGCC	6 cut(s)	310, 342, 372, 442, 932, 1204
ApaLI	GTGCAC	2 cut(s)	840, 1552
ApeKI	GCWGC	2 cut(s)	59, 1775
ApoI	RAATTY	4 cut(s)	556, 598, 889, 1001
AspLEI	GCGC	1 cut(s)	1497
AspS9I	GGNCC	7 cut(s)	310, 372, 417, 519, 932, 1688, 2021
AsuC2I	CCSGG	7 cut(s)	42, 309, 341, 441, 473, 517, 1430
AsuHPI	GGTGA	8 cut(s)	16, 30, 307, 744, 866, 1106, 1790, 1829
AvaI	CYCGRG	2 cut(s)	412, 464
AvaII	GGWCC	4 cut(s)	417, 519, 1688, 2021
BaeGI	GKGCMC	2 cut(s)	844, 1556
BanII	GRGCYC	1 cut(s)	1772
BauI	CACGAG	1 cut(s)	1437
Bbv12I	GWGCWC	4 cut(s)	480, 844, 1556, 1772
BbvI	GCAGC	2 cut(s)	71, 1762
BccI	CCATC	7 cut(s)	250, 333, 769, 947, 1292, 1378, 1475
BciT130I	CCWGG	2 cut(s)	330, 1169
BciVI	GTATCC	1 cut(s)	1478
BclI	TGATCA	2 cut(s)	916, 1111
BcnI	CCSGG	7 cut(s)	42, 309, 341, 441, 473, 517, 1430
BcoDI	GTCTC	3 cut(s)	81, 741, 829
BcuI	ACTAGT	2 cut(s)	1667, 1901
BfuAI	ACCTGC	1 cut(s)	1809
BfuI	GTATCC	1 cut(s)	1478
BisI	GCNGC	2 cut(s)	60, 1776
BlsI	GCNGC	2 cut(s)	61, 1777
BmcAI	AGTACT	2 cut(s)	1267, 2013
Bme1390I	CCNGG	9 cut(s)	42, 309, 330, 341, 441, 473, 517, 1169, 1430
Bme18I	GGWCC	4 cut(s)	417, 519, 1688, 2021
BmeT110I	CYCGRG	2 cut(s)	412, 464
BmgBI	CACGTC	1 cut(s)	75
BmgT120I	GGNCC	7 cut(s)	310, 372, 417, 519, 932, 1688, 2021
BmiI	GGNNCC	7 cut(s)	334, 373, 419, 520, 784, 1434, 1689
BmrFI	CCNGG	9 cut(s)	42, 309, 330, 341, 441, 473, 517, 1169, 1430
BmsI	GCATC	4 cut(s)	847, 1556, 1604, 1962
BpmI	CTGGAG	1 cut(s)	1170
Bpu10I	CCTNAGC	2 cut(s)	1119, 1272
BpuMI	CCSGG	7 cut(s)	42, 309, 341, 441, 473, 517, 1430
BsaAI	YACGTR	1 cut(s)	1949
BsaHI	GRCGYC	1 cut(s)	455
BsaI	GGTCTC	1 cut(s)	829
BsaJI	CCNNGG	4 cut(s)	471, 576, 691, 1535
BsaWI	WCCGGW	3 cut(s)	15, 271, 811
BsaXI	ACNNNNNCTCC	4 cut(s)	421, 451, 1861, 1891
Bsc4I	CCNNNNNNNGG	7 cut(s)	256, 369, 515, 851, 893, 1289, 1713
Bse118I	RCCGGY	1 cut(s)	394
Bse1I	ACTGG	6 cut(s)	54, 968, 1153, 1207, 1224, 1412
Bse3DI	GCAATG	1 cut(s)	676
BseBI	CCWGG	2 cut(s)	330, 1169
BseDI	CCNNGG	4 cut(s)	471, 576, 691, 1535
BseGI	GGATG	8 cut(s)	325, 1030, 1220, 1389, 1393, 1483, 1571, 1595
BseLI	CCNNNNNNNGG	7 cut(s)	256, 369, 515, 851, 893, 1289, 1713
BseMI	GCAATG	1 cut(s)	676
BseMII	CTCAG	3 cut(s)	61, 1263, 1448
BseNI	ACTGG	6 cut(s)	54, 968, 1153, 1207, 1224, 1412
BseRI	GAGGAG	4 cut(s)	142, 470, 775, 1393
BseSI	GKGCMC	2 cut(s)	844, 1556
BseXI	GCAGC	2 cut(s)	71, 1762
BseYI	CCCAGC	1 cut(s)	249
BsgI	GTGCAG	1 cut(s)	78
Bsh1285I	CGRYCG	1 cut(s)	267
BshFI	GGCC	6 cut(s)	312, 344, 374, 444, 934, 1206
BsiEI	CGRYCG	1 cut(s)	267
BsiHKAI	GWGCWC	4 cut(s)	480, 844, 1556, 1772
BsiHKCI	CYCGRG	2 cut(s)	412, 464
BslFI	GGGAC	5 cut(s)	403, 454, 562, 1637, 1701
BslI	CCNNNNNNNGG	7 cut(s)	256, 369, 515, 851, 893, 1289, 1713
BsmAI	GTCTC	3 cut(s)	81, 741, 829
BsmBI	CGTCTC	1 cut(s)	81
BsmFI	GGGAC	5 cut(s)	403, 454, 562, 1637, 1701
BsmI	GAATGC	2 cut(s)	281, 1708
BsnI	GGCC	6 cut(s)	312, 344, 374, 444, 934, 1206
Bso31I	GGTCTC	1 cut(s)	829
BsoBI	CYCGRG	2 cut(s)	412, 464
Bsp1286I	GDGCHC	4 cut(s)	480, 844, 1556, 1772
Bsp19I	CCATGG	1 cut(s)	576
BspACI	CCGC	5 cut(s)	267, 284, 366, 1489, 1659
BspANI	GGCC	6 cut(s)	312, 344, 374, 444, 934, 1206
BspCNI	CTCAG	3 cut(s)	60, 1264, 1449
BspHI	TCATGA	2 cut(s)	1069, 1645
BspLI	GGNNCC	7 cut(s)	334, 373, 419, 520, 784, 1434, 1689
BspMI	ACCTGC	1 cut(s)	1809
BspPI	GGATC	6 cut(s)	45, 299, 1173, 1598, 1782, 1930
BspTNI	GGTCTC	1 cut(s)	829
BsrDI	GCAATG	1 cut(s)	676
BsrFI	RCCGGY	1 cut(s)	394
BsrI	ACTGG	6 cut(s)	54, 968, 1153, 1207, 1224, 1412
BssAI	RCCGGY	1 cut(s)	394
BssECI	CCNNGG	4 cut(s)	471, 576, 691, 1535
BssNI	GRCGYC	1 cut(s)	455
BssSI	CACGAG	1 cut(s)	1437
BssT1I	CCWWGG	3 cut(s)	576, 691, 1535
Bst2BI	CACGAG	1 cut(s)	1437
Bst2UI	CCWGG	2 cut(s)	330, 1169
Bst4CI	ACNGT	4 cut(s)	912, 1040, 1699, 1892
Bst6I	CTCTTC	2 cut(s)	160, 2002
BstACI	GRCGYC	1 cut(s)	455
BstAPI	GCANNNNNTGC	1 cut(s)	682
BstBAI	YACGTR	1 cut(s)	1949
BstC8I	GCNNGC	4 cut(s)	396, 678, 781, 1493
BstDEI	CTNAG	4 cut(s)	47, 1119, 1272, 1457
BstDSI	CCRYGG	1 cut(s)	576
BstENI	CCTNNNNNAGG	2 cut(s)	849, 1287
BstF5I	GGATG	8 cut(s)	325, 1030, 1220, 1389, 1393, 1483, 1571, 1595
BstHHI	GCGC	1 cut(s)	1497
BstMAI	GTCTC	3 cut(s)	81, 741, 829
BstMCI	CGRYCG	1 cut(s)	267
BstMWI	GCNNNNNNNGC	4 cut(s)	391, 400, 682, 1060
BstNI	CCWGG	2 cut(s)	330, 1169
BstNSI	RCATGY	2 cut(s)	989, 1586
BstSCI	CCNGG	9 cut(s)	40, 307, 328, 339, 439, 471, 515, 1167, 1428
BstSLI	GKGCMC	2 cut(s)	844, 1556
BstV1I	GCAGC	2 cut(s)	71, 1762
BstX2I	RGATCY	4 cut(s)	50, 1178, 1787, 1922
BstYI	RGATCY	4 cut(s)	50, 1178, 1787, 1922
BsuI	GTATCC	1 cut(s)	1478
BsuRI	GGCC	6 cut(s)	312, 344, 374, 444, 934, 1206
BtgI	CCRYGG	1 cut(s)	576
BtrI	CACGTC	1 cut(s)	75
BtsCI	GGATG	8 cut(s)	325, 1030, 1220, 1389, 1393, 1483, 1571, 1595
BtsIMutI	CAGTG	1 cut(s)	61
BveI	ACCTGC	1 cut(s)	1809
Cac8I	GCNNGC	4 cut(s)	396, 678, 781, 1493
CciI	TCATGA	2 cut(s)	1069, 1645
CfoI	GCGC	1 cut(s)	1497
Cfr10I	RCCGGY	1 cut(s)	394
Cfr13I	GGNCC	7 cut(s)	310, 372, 417, 519, 932, 1688, 2021
Csp6I	GTAC	5 cut(s)	379, 1104, 1248, 1266, 2012
CviQI	GTAC	5 cut(s)	379, 1104, 1248, 1266, 2012
DdeI	CTNAG	4 cut(s)	47, 1119, 1272, 1457
DraI	TTTAAA	1 cut(s)	1971
EaeI	YGGCCR	1 cut(s)	1204
Eam1104I	CTCTTC	2 cut(s)	160, 2002
EarI	CTCTTC	2 cut(s)	160, 2002
Ecl136II	GAGCTC	1 cut(s)	1770
Eco130I	CCWWGG	3 cut(s)	576, 691, 1535
Eco24I	GRGCYC	1 cut(s)	1772
Eco31I	GGTCTC	1 cut(s)	829
Eco47I	GGWCC	4 cut(s)	417, 519, 1688, 2021
Eco53kI	GAGCTC	1 cut(s)	1770
Eco57I	CTGAAG	1 cut(s)	921
Eco88I	CYCGRG	2 cut(s)	412, 464
EcoICRI	GAGCTC	1 cut(s)	1770
EcoNI	CCTNNNNNAGG	2 cut(s)	849, 1287
EcoO109I	RGGNCCY	2 cut(s)	417, 519
EcoRII	CCWGG	2 cut(s)	328, 1167
EcoT14I	CCWWGG	3 cut(s)	576, 691, 1535
EcoT38I	GRGCYC	1 cut(s)	1772
ErhI	CCWWGG	3 cut(s)	576, 691, 1535
Esp3I	CGTCTC	1 cut(s)	81
FalI	AAGNNNNNCTT	2 cut(s)	919, 951
FaqI	GGGAC	5 cut(s)	403, 454, 562, 1637, 1701
FauI	CCCGC	1 cut(s)	291
FauNDI	CATATG	1 cut(s)	819
FbaI	TGATCA	2 cut(s)	916, 1111
FblI	GTMKAC	1 cut(s)	1135
Fnu4HI	GCNGC	2 cut(s)	60, 1776
FokI	GGATG	8 cut(s)	312, 1017, 1207, 1396, 1400, 1490, 1578, 1582
FriOI	GRGCYC	1 cut(s)	1772
Fsp4HI	GCNGC	2 cut(s)	60, 1776
GlaI	GCGC	1 cut(s)	1496
GluI	GCNGC	2 cut(s)	60, 1776
GsaI	CCCAGC	1 cut(s)	253
GsuI	CTGGAG	1 cut(s)	1170
HaeIII	GGCC	6 cut(s)	312, 344, 374, 444, 934, 1206
HhaI	GCGC	1 cut(s)	1497
Hin1I	GRCGYC	1 cut(s)	455
Hin6I	GCGC	1 cut(s)	1495
HinP1I	GCGC	1 cut(s)	1495
HincII	GTYRAC	2 cut(s)	68, 1136
HindII	GTYRAC	2 cut(s)	68, 1136
HindIII	AAGCTT	1 cut(s)	607
HphI	GGTGA	8 cut(s)	16, 30, 307, 744, 866, 1106, 1790, 1829
Hpy166II	GTNNAC	6 cut(s)	68, 199, 842, 1106, 1136, 1554
Hpy8I	GTNNAC	6 cut(s)	68, 199, 842, 1106, 1136, 1554
Hpy99I	CGWCG	4 cut(s)	299, 457, 460, 1140
HpyCH4III	ACNGT	4 cut(s)	912, 1040, 1699, 1892
HpyCH4IV	ACGT	4 cut(s)	24, 74, 455, 1948
HpyCH4V	TGCA	8 cut(s)	59, 554, 685, 842, 860, 1026, 1554, 1810
HpyF10VI	GCNNNNNNNGC	4 cut(s)	391, 400, 682, 1060
HpyF3I	CTNAG	4 cut(s)	47, 1119, 1272, 1457
HpySE526I	ACGT	4 cut(s)	24, 74, 455, 1948
Hsp92I	GRCGYC	1 cut(s)	455
HspAI	GCGC	1 cut(s)	1495
KroI	GCCGGC	1 cut(s)	394
KroNI	GCCGGC	1 cut(s)	396
Ksp22I	TGATCA	2 cut(s)	916, 1111
LmnI	GCTCC	9 cut(s)	338, 408, 483, 788, 814, 833, 1151, 1539, 1882
Lsp1109I	GCAGC	2 cut(s)	71, 1762
LweI	GCATC	4 cut(s)	847, 1556, 1604, 1962
MaeII	ACGT	4 cut(s)	24, 74, 455, 1948
MaeIII	GTNAC	4 cut(s)	36, 643, 750, 1405
MboII	GAAGA	6 cut(s)	147, 936, 1060, 1184, 1971, 2019
MflI	RGATCY	4 cut(s)	50, 1178, 1787, 1922
MhlI	GDGCHC	4 cut(s)	480, 844, 1556, 1772
MluCI	AATT	6 cut(s)	556, 598, 889, 1001, 1398, 1849
MlyI	GAGTC	5 cut(s)	39, 44, 117, 254, 476
MmeI	TCCRAC	8 cut(s)	318, 360, 476, 510, 533, 1206, 1741, 1815
MreI	CGCCGGCG	1 cut(s)	394
MroNI	GCCGGC	1 cut(s)	394
MseI	TTAA	8 cut(s)	9, 618, 765, 990, 1419, 1854, 1898, 1970
MslI	CAYNNNNRTG	3 cut(s)	274, 669, 1644
MspA1I	CMGCKG	2 cut(s)	366, 1491
MspR9I	CCNGG	9 cut(s)	42, 309, 330, 341, 441, 473, 517, 1169, 1430
Mva1269I	GAATGC	2 cut(s)	281, 1708
MvaI	CCWGG	2 cut(s)	330, 1169
MwoI	GCNNNNNNNGC	4 cut(s)	391, 400, 682, 1060
NaeI	GCCGGC	1 cut(s)	396
NciI	CCSGG	7 cut(s)	42, 309, 341, 441, 473, 517, 1430
NcoI	CCATGG	1 cut(s)	576
NdeI	CATATG	1 cut(s)	819
NgoMIV	GCCGGC	1 cut(s)	394
NlaIV	GGNNCC	7 cut(s)	334, 373, 419, 520, 784, 1434, 1689
NmeAIII	GCCGAG	1 cut(s)	1232
NmuCI	GTSAC	2 cut(s)	36, 750
NspI	RCATGY	2 cut(s)	989, 1586
PaeR7I	CTCGAG	2 cut(s)	412, 464
PagI	TCATGA	2 cut(s)	1069, 1645
PaqCI	CACCTGC	1 cut(s)	1809
PciI	ACATGT	1 cut(s)	985
PcsI	WCGNNNNNNNCGW	1 cut(s)	1347
PctI	GAATGC	2 cut(s)	281, 1708
PdiI	GCCGGC	1 cut(s)	396
PfeI	GAWTC	5 cut(s)	529, 1717, 1912, 1943, 1960
PflMI	CCANNNNNTGG	2 cut(s)	256, 893
PfoI	TCCNGGA	2 cut(s)	1167, 1428
PkrI	GCNGC	2 cut(s)	61, 1777
PleI	GAGTC	5 cut(s)	39, 43, 117, 254, 475
PpsI	GAGTC	5 cut(s)	39, 43, 117, 254, 475
Ppu21I	YACGTR	1 cut(s)	1949
PpuMI	RGGWCCY	2 cut(s)	417, 519
PscI	ACATGT	1 cut(s)	985
PsiI	TTATAA	1 cut(s)	1619
Psp124BI	GAGCTC	1 cut(s)	1772
Psp5II	RGGWCCY	2 cut(s)	417, 519
Psp6I	CCWGG	2 cut(s)	328, 1167
PspFI	CCCAGC	1 cut(s)	249
PspGI	CCWGG	2 cut(s)	328, 1167
PspN4I	GGNNCC	7 cut(s)	334, 373, 419, 520, 784, 1434, 1689
PspPI	GGNCC	7 cut(s)	310, 372, 417, 519, 932, 1688, 2021
PspPPI	RGGWCCY	2 cut(s)	417, 519
PsuI	RGATCY	4 cut(s)	50, 1178, 1787, 1922
RsaI	GTAC	5 cut(s)	380, 1105, 1249, 1267, 2013
RsaNI	GTAC	5 cut(s)	379, 1104, 1248, 1266, 2012
RseI	CAYNNNNRTG	3 cut(s)	274, 669, 1644
SacI	GAGCTC	1 cut(s)	1772
SalI	GTCGAC	1 cut(s)	1134
SaqAI	TTAA	8 cut(s)	9, 618, 765, 990, 1419, 1854, 1898, 1970
SatI	GCNGC	2 cut(s)	60, 1776
Sau96I	GGNCC	7 cut(s)	310, 372, 417, 519, 932, 1688, 2021
ScaI	AGTACT	2 cut(s)	1267, 2013
SchI	GAGTC	5 cut(s)	39, 44, 117, 254, 476
ScrFI	CCNGG	9 cut(s)	42, 309, 330, 341, 441, 473, 517, 1169, 1430
SduI	GDGCHC	4 cut(s)	480, 844, 1556, 1772
SfaNI	GCATC	4 cut(s)	847, 1556, 1604, 1962
Sfr274I	CTCGAG	2 cut(s)	412, 464
SgrAI	CRCCGGYG	1 cut(s)	394
SinI	GGWCC	4 cut(s)	417, 519, 1688, 2021
SlaI	CTCGAG	2 cut(s)	412, 464
SmiMI	CAYNNNNRTG	3 cut(s)	274, 669, 1644
SmlI	CTYRAG	2 cut(s)	412, 464
SmoI	CTYRAG	2 cut(s)	412, 464
SpeI	ACTAGT	2 cut(s)	1667, 1901
Sse9I	AATT	6 cut(s)	556, 598, 889, 1001, 1398, 1849
SsiI	CCGC	5 cut(s)	267, 284, 366, 1489, 1659
SstI	GAGCTC	1 cut(s)	1772
StyD4I	CCNGG	9 cut(s)	40, 307, 328, 339, 439, 471, 515, 1167, 1428
StyI	CCWWGG	3 cut(s)	576, 691, 1535
TaaI	ACNGT	4 cut(s)	912, 1040, 1699, 1892
TaiI	ACGT	4 cut(s)	27, 77, 458, 1951
TaqI	TCGA	9 cut(s)	263, 303, 413, 465, 1135, 1341, 1350, 1720, 1956
TasI	AATT	6 cut(s)	556, 598, 889, 1001, 1398, 1849
TatI	WGTACW	3 cut(s)	378, 1265, 2011
TfiI	GAWTC	5 cut(s)	529, 1717, 1912, 1943, 1960
Tru1I	TTAA	8 cut(s)	9, 618, 765, 990, 1419, 1854, 1898, 1970
Tru9I	TTAA	8 cut(s)	9, 618, 765, 990, 1419, 1854, 1898, 1970
TscAI	CASTG	1 cut(s)	61
TseFI	GTSAC	2 cut(s)	36, 750
TseI	GCWGC	2 cut(s)	59, 1775
Tsp45I	GTSAC	2 cut(s)	36, 750
TspDTI	ATGAA	5 cut(s)	506, 606, 806, 1175, 1925
TspGWI	ACGGA	2 cut(s)	665, 1869
TspRI	CASTG	1 cut(s)	61
Van91I	CCANNNNNTGG	2 cut(s)	256, 893
VneI	GTGCAC	2 cut(s)	840, 1552
VpaK11BI	GGWCC	4 cut(s)	417, 519, 1688, 2021
XagI	CCTNNNNNAGG	2 cut(s)	849, 1287
XapI	RAATTY	4 cut(s)	556, 598, 889, 1001
XbaI	TCTAGA	2 cut(s)	629, 1925
XceI	RCATGY	2 cut(s)	989, 1586
XhoI	CTCGAG	2 cut(s)	412, 464
XmiI	GTMKAC	1 cut(s)	1135
ZraI	GACGTC	1 cut(s)	456
ZrmI	AGTACT	2 cut(s)	1267, 2013

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.