AT4G30310

FGGY family of carbohydrate kinases, N-terminal domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0002316
Physical Location & Seq
Forward (+)
14831738 .. 14835343
3606 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G30310.3

Sequence Viewer

Length: 1500 bp
ATGACCACCGCTGAGTTAAATCCATTTCCGTCTCGCTCCGTTTTTCTCGGTGTCGACGTTGGCACTGGAAGCGCCCGTGCCGGTTTGTTCGATGATAATGGGAAGCTTCTAGGATCTGCTACTAGTCCAATACAGATTTGGAAGGATGGAGACTGTATTGAGCAATCTTCAACAGATATTTGGCATGCAGTTTGTGCTGCTGTGAAATCTGCTTGCTCTCTTGCAAATGTTTCGGATGTGGAAGTGAAAGGAATAGGCTTTGCTGCCACGTGCTCTCTCGTGGCGGTTGATGCTGAGGGATCTCCTGTTACAGTGTCGTGGAGTGGTGATTCAAGAAGAAACATTATTGTATGGATGGACCATAGAGCTGTAAAGCAGGCAGAGAGAATCAACTCATTTAATTCTCCAGTCTTGCAGTACTGTGGTGGCGGTGTTTCTCCAGAAATGGAGCCACCAAAACTTTTATGGGTGAAAGAAAATCTTAAGGAGTCTTGGTCAATGGTGTATAAGTGGATGGACTTGAGTGATTGGCTATCCTACAGAGCTACTGGAGATGATACACGTAGTTTGTGCACCACAGTATGTAAATGGACTTATCTTGGCCATGCACACATGCACCAGATGACTGAGAAGGCTTCTCGTGATATGGAAGCTTGTGGATGGGATGATGAGTTCTGGGAAGAAATTGGTTTAGGCGATTTGGTAGATGGGCACCATGCTAAGATTGGACGAAGTGTAGCTTTTCCTGGACATCCACTGGGTAATGGTCTAACTGCAACCGCTGCTAAGGAACTGGGTCTGTTAGCTGGAACTCCTGTTGGGACTTCACTCATTGATGCTCATGCCGGTGGTGTTGGGGTCATGGAAAAGTCAGATGTGGATACCTTGTGCTCTCGAATGGTCTTGGTATGTGGCACATCAACTTGTCATATGGCTGTTTCCCGTGAAAAGCTGTTTATTCCTGGCGTGTGGGGGCCTTTTTGGTCAGCTATGGTTCCGGAGTATTGGCTTACAGAAGGAGGACAAAGTGCTACTGGAGCTTTACTTGATCACATCATCGAAAATCATGTTGCTTCTCCCCGTCTTGCAAATCGTGCTGCTTCCCAGAAAGTTTCTGTGTTTGAACTCCTAAACAACATTTTGAAAACGATGGCTGAAGATACAAGTTCTCCATTTATATCTGCCCTTACCTCAGACATGCATATCCTTCCCGACTTTCACGGAAACAGATCTCCCGTTGCAGACCCAAATTCGAAAGGAGTGATATTCGGAATGTCTCTTGACACGTCCGAGAAGCAGTTGGCTCTTCTATACCTCGCCACAATTCAGGGAATCGCATATGGTACACGTCATATCGTAGAGCATTGCAATACTCATGGTCACAAAATTGATACACTGCTTGCTTGTGGCGGCCTTTCAAAGAACCCATTGTTCATCCAAGAACATGCTGATATAGTTGTCCGATTATTCTTCCTCGAGAAAGCGAGTCTGTTCTCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FGGY_C FGGY_N

Protein Analysis

499

Amino Acids

53.99

Weight (kDa)

5.53

Isoelectric Point (pI)

44.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FGGY_C PF02782 183 - 392 6e-57 FGGY family of carbohydrate kinases, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 711
AccI GTMKAC 1 cut(s) 54
AccIII TCCGGA 1 cut(s) 997
AciI CCGC 5 cut(s) 9, 284, 429, 780, 1410
AclWI GGATC 2 cut(s) 121, 307
AcoI YGGCCR 1 cut(s) 601
AcsI RAATTY 1 cut(s) 1249
AcuI CTGAAG 1 cut(s) 1176
AcvI CACGTG 1 cut(s) 270
AfaI GTAC 2 cut(s) 419, 1345
AflII CTTAAG 1 cut(s) 482
AflIII ACRYGT 3 cut(s) 560, 1284, 1346
AgsI TTSAA 5 cut(s) 171, 333, 1124, 1144, 1419
AhlI ACTAGT 1 cut(s) 122
AjiI CACGTC 2 cut(s) 1287, 1349
AjnI CCWGG 2 cut(s) 745, 961
AloI GAACNNNNNNTCC 2 cut(s) 656, 688
AluBI AGCT 9 cut(s) 106, 368, 545, 653, 740, 806, 952, 989, 1040
AluI AGCT 9 cut(s) 106, 368, 545, 653, 740, 806, 952, 989, 1040
Alw21I GWGCWC 3 cut(s) 275, 575, 893
Alw26I GTCTC 3 cut(s) 36, 144, 1281
Alw44I GTGCAC 1 cut(s) 571
AlwI GGATC 2 cut(s) 121, 307
Ama87I CYCGRG 1 cut(s) 1475
Aor13HI TCCGGA 1 cut(s) 997
AoxI GGCC 3 cut(s) 601, 974, 1411
ApaLI GTGCAC 1 cut(s) 571
ApeKI GCWGC 4 cut(s) 197, 263, 782, 1097
ApoI RAATTY 1 cut(s) 1249
AspLEI GCGC 1 cut(s) 74
AspS9I GGNCC 2 cut(s) 358, 974
AsuHPI GGTGA 2 cut(s) 338, 481
AsuII TTCGAA 1 cut(s) 1253
AvaI CYCGRG 1 cut(s) 1475
AvaII GGWCC 1 cut(s) 358
BaeGI GKGCMC 2 cut(s) 575, 714
BalI TGGCCA 1 cut(s) 603
BanI GGYRCC 1 cut(s) 711
BauI CACGAG 2 cut(s) 278, 639
BbrPI CACGTG 1 cut(s) 270
Bbv12I GWGCWC 3 cut(s) 275, 575, 893
BbvCI CCTCAGC 1 cut(s) 294
BbvI GCAGC 4 cut(s) 184, 250, 769, 1084
BccI CCATC 6 cut(s) 140, 349, 508, 654, 701, 1144
BcgI CGANNNNNNTGC 2 cut(s) 213, 247
BciT130I CCWGG 2 cut(s) 747, 963
BciVI GTATCC 1 cut(s) 874
BclI TGATCA 1 cut(s) 1048
BcoDI GTCTC 3 cut(s) 36, 144, 1281
BcuI ACTAGT 1 cut(s) 122
BfaI CTAG 2 cut(s) 110, 123
BfmI CTRYAG 1 cut(s) 538
BfoI RGCGCY 1 cut(s) 75
BfrI CTTAAG 1 cut(s) 482
BfuI GTATCC 1 cut(s) 874
BglII AGATCT 1 cut(s) 1229
BisI GCNGC 5 cut(s) 198, 264, 783, 1098, 1411
BlsI GCNGC 5 cut(s) 199, 265, 784, 1099, 1412
BmcAI AGTACT 1 cut(s) 419
Bme1390I CCNGG 2 cut(s) 747, 963
Bme18I GGWCC 1 cut(s) 358
BmeT110I CYCGRG 1 cut(s) 1475
BmgBI CACGTC 2 cut(s) 1287, 1349
BmgT120I GGNCC 2 cut(s) 358, 974
BmiI GGNNCC 4 cut(s) 450, 713, 975, 996
BmrFI CCNGG 2 cut(s) 747, 963
BmrI ACTGGG 2 cut(s) 767, 803
BmsI GCATC 2 cut(s) 280, 826
BmuI ACTGGG 2 cut(s) 767, 803
BpmI CTGGAG 4 cut(s) 390, 423, 570, 1056
Bpu10I CCTNAGC 2 cut(s) 294, 786
Bpu14I TTCGAA 1 cut(s) 1253
BpuEI CTTGAG 1 cut(s) 541
BsaAI YACGTR 2 cut(s) 270, 563
BsaWI WCCGGW 1 cut(s) 997
BsaXI ACNNNNNCTCC 4 cut(s) 479, 509, 1153, 1183
Bse118I RCCGGY 2 cut(s) 80, 845
Bse1I ACTGG 6 cut(s) 70, 407, 553, 762, 798, 1039
Bse3DI GCAATG 1 cut(s) 1363
BseAI TCCGGA 1 cut(s) 997
BseBI CCWGG 2 cut(s) 747, 963
BseGI GGATG 8 cut(s) 151, 241, 360, 519, 665, 670, 751, 1434
BseMI GCAATG 1 cut(s) 1363
BseMII CTCAG 3 cut(s) 285, 618, 1206
BseNI ACTGG 6 cut(s) 70, 407, 553, 762, 798, 1039
BseSI GKGCMC 2 cut(s) 575, 714
BseXI GCAGC 4 cut(s) 184, 250, 769, 1084
BshFI GGCC 3 cut(s) 603, 976, 1413
BshNI GGYRCC 1 cut(s) 711
BsiHKAI GWGCWC 3 cut(s) 275, 575, 893
BsiHKCI CYCGRG 1 cut(s) 1475
BsiSI CCGG 3 cut(s) 81, 846, 998
BslFI GGGAC 1 cut(s) 835
BsmAI GTCTC 3 cut(s) 36, 144, 1281
BsmBI CGTCTC 1 cut(s) 36
BsmFI GGGAC 1 cut(s) 835
BsnI GGCC 3 cut(s) 603, 976, 1413
BsoBI CYCGRG 1 cut(s) 1475
Bsp119I TTCGAA 1 cut(s) 1253
Bsp1286I GDGCHC 4 cut(s) 275, 575, 714, 893
Bsp13I TCCGGA 1 cut(s) 997
Bsp143I GATC 4 cut(s) 113, 299, 1048, 1229
BspACI CCGC 5 cut(s) 9, 284, 429, 780, 1410
BspANI GGCC 3 cut(s) 603, 976, 1413
BspCNI CTCAG 4 cut(s) 4, 286, 619, 1205
BspEI TCCGGA 1 cut(s) 997
BspLI GGNNCC 4 cut(s) 450, 713, 975, 996
BspPI GGATC 2 cut(s) 121, 307
BspQI GCTCTTC 1 cut(s) 1311
BspT104I TTCGAA 1 cut(s) 1253
BspT107I GGYRCC 1 cut(s) 711
BspTI CTTAAG 1 cut(s) 482
BsrDI GCAATG 1 cut(s) 1363
BsrFI RCCGGY 2 cut(s) 80, 845
BsrI ACTGG 6 cut(s) 70, 407, 553, 762, 798, 1039
BssAI RCCGGY 2 cut(s) 80, 845
BssMI GATC 4 cut(s) 113, 299, 1048, 1229
BssSI CACGAG 2 cut(s) 278, 639
Bst2BI CACGAG 2 cut(s) 278, 639
Bst2UI CCWGG 2 cut(s) 747, 963
Bst4CI ACNGT 4 cut(s) 155, 313, 422, 580
Bst6I CTCTTC 1 cut(s) 1311
BstAFI CTTAAG 1 cut(s) 482
BstAPI GCANNNNNTGC 3 cut(s) 194, 782, 1094
BstBAI YACGTR 2 cut(s) 270, 563
BstBI TTCGAA 1 cut(s) 1253
BstC8I GCNNGC 4 cut(s) 186, 214, 378, 1401
BstDEI CTNAG 7 cut(s) 12, 294, 627, 720, 786, 1192, 1497
BstF5I GGATG 8 cut(s) 151, 241, 360, 519, 665, 670, 751, 1434
BstH2I RGCGCY 1 cut(s) 75
BstHHI GCGC 1 cut(s) 74
BstKTI GATC 4 cut(s) 116, 302, 1051, 1232
BstMAI GTCTC 3 cut(s) 36, 144, 1281
BstMBI GATC 4 cut(s) 113, 299, 1048, 1229
BstMWI GCNNNNNNNGC 6 cut(s) 69, 194, 290, 782, 1037, 1094
BstNI CCWGG 2 cut(s) 747, 963
BstNSI RCATGY 4 cut(s) 188, 616, 1201, 1448
BstSCI CCNGG 2 cut(s) 745, 961
BstSFI CTRYAG 1 cut(s) 538
BstSLI GKGCMC 2 cut(s) 575, 714
BstV1I GCAGC 4 cut(s) 184, 250, 769, 1084
BstX2I RGATCY 3 cut(s) 113, 299, 1229
BstYI RGATCY 3 cut(s) 113, 299, 1229
BsuI GTATCC 1 cut(s) 874
BsuRI GGCC 3 cut(s) 603, 976, 1413
BtrI CACGTC 2 cut(s) 1287, 1349
BtsCI GGATG 8 cut(s) 151, 241, 360, 519, 665, 670, 751, 1434
BtsI GCAGTG 1 cut(s) 1394
BtsIMutI CAGTG 4 cut(s) 63, 318, 755, 1394
Cac8I GCNNGC 4 cut(s) 186, 214, 378, 1401
CfoI GCGC 1 cut(s) 74
Cfr10I RCCGGY 2 cut(s) 80, 845
Cfr13I GGNCC 2 cut(s) 358, 974
Csp6I GTAC 2 cut(s) 418, 1344
CviQI GTAC 2 cut(s) 418, 1344
DdeI CTNAG 7 cut(s) 12, 294, 627, 720, 786, 1192, 1497
DpnI GATC 4 cut(s) 115, 301, 1050, 1231
DpnII GATC 4 cut(s) 113, 299, 1048, 1229
EaeI YGGCCR 1 cut(s) 601
Eam1104I CTCTTC 1 cut(s) 1311
EarI CTCTTC 1 cut(s) 1311
Eco47I GGWCC 1 cut(s) 358
Eco57I CTGAAG 1 cut(s) 1176
Eco72I CACGTG 1 cut(s) 270
Eco88I CYCGRG 1 cut(s) 1475
EcoO109I RGGNCCY 1 cut(s) 974
EcoRII CCWGG 2 cut(s) 745, 961
EcoT22I ATGCAT 1 cut(s) 1203
Esp3I CGTCTC 1 cut(s) 36
FalI AAGNNNNNCTT 4 cut(s) 465, 497, 724, 756
FaqI GGGAC 1 cut(s) 835
FauNDI CATATG 2 cut(s) 930, 1339
FbaI TGATCA 1 cut(s) 1048
FblI GTMKAC 1 cut(s) 54
Fnu4HI GCNGC 5 cut(s) 198, 264, 783, 1098, 1411
FokI GGATG 8 cut(s) 158, 248, 367, 526, 672, 677, 738, 1421
Fsp4HI GCNGC 5 cut(s) 198, 264, 783, 1098, 1411
FspBI CTAG 2 cut(s) 110, 123
GlaI GCGC 1 cut(s) 73
GluI GCNGC 5 cut(s) 198, 264, 783, 1098, 1411
GsuI CTGGAG 4 cut(s) 390, 423, 570, 1056
HaeII RGCGCY 1 cut(s) 75
HaeIII GGCC 3 cut(s) 603, 976, 1413
HapII CCGG 3 cut(s) 81, 846, 998
HhaI GCGC 1 cut(s) 74
Hin6I GCGC 1 cut(s) 72
HinP1I GCGC 1 cut(s) 72
HincII GTYRAC 1 cut(s) 55
HindII GTYRAC 1 cut(s) 55
HindIII AAGCTT 2 cut(s) 104, 651
HinfI GANTC 5 cut(s) 329, 387, 488, 1332, 1486
HpaII CCGG 3 cut(s) 81, 846, 998
HphI GGTGA 2 cut(s) 338, 481
Hpy166II GTNNAC 3 cut(s) 55, 573, 1346
Hpy188I TCNGA 6 cut(s) 235, 874, 1195, 1271, 1291, 1463
Hpy188III TCNNGA 8 cut(s) 333, 440, 641, 894, 998, 1211, 1280, 1477
Hpy8I GTNNAC 3 cut(s) 55, 573, 1346
Hpy99I CGWCG 1 cut(s) 59
HpyAV CCTTC 4 cut(s) 136, 625, 1010, 1217
HpyCH4III ACNGT 4 cut(s) 155, 313, 422, 580
HpyCH4IV ACGT 5 cut(s) 57, 269, 562, 1286, 1348
HpyF10VI GCNNNNNNNGC 6 cut(s) 69, 194, 290, 782, 1037, 1094
HpyF3I CTNAG 7 cut(s) 12, 294, 627, 720, 786, 1192, 1497
HpySE526I ACGT 5 cut(s) 57, 269, 562, 1286, 1348
HspAI GCGC 1 cut(s) 72
Kpn2I TCCGGA 1 cut(s) 997
Ksp22I TGATCA 1 cut(s) 1048
Kzo9I GATC 4 cut(s) 113, 299, 1048, 1229
LguI GCTCTTC 1 cut(s) 1311
LmnI GCTCC 3 cut(s) 41, 448, 1037
Lsp1109I GCAGC 4 cut(s) 184, 250, 769, 1084
LweI GCATC 2 cut(s) 280, 826
MaeI CTAG 2 cut(s) 110, 123
MaeII ACGT 5 cut(s) 57, 269, 562, 1286, 1348
MaeIII GTNAC 2 cut(s) 307, 1379
MalI GATC 4 cut(s) 115, 301, 1050, 1231
MboI GATC 4 cut(s) 113, 299, 1048, 1229
MboII GAAGA 6 cut(s) 159, 348, 692, 1169, 1298, 1462
MflI RGATCY 3 cut(s) 113, 299, 1229
MhlI GDGCHC 4 cut(s) 275, 575, 714, 893
MlsI TGGCCA 1 cut(s) 603
MluCI AATT 5 cut(s) 400, 684, 1249, 1323, 1386
MluNI TGGCCA 1 cut(s) 603
MlyI GAGTC 2 cut(s) 497, 1495
MnlI CCTC 5 cut(s) 289, 1013, 1201, 1325, 1484
Mox20I TGGCCA 1 cut(s) 603
Mph1103I ATGCAT 1 cut(s) 1203
MroI TCCGGA 1 cut(s) 997
MscI TGGCCA 1 cut(s) 603
MseI TTAA 3 cut(s) 17, 399, 483
MslI CAYNNNNRTG 1 cut(s) 846
Msp20I TGGCCA 1 cut(s) 603
MspA1I CMGCKG 2 cut(s) 11, 782
MspCI CTTAAG 1 cut(s) 482
MspI CCGG 3 cut(s) 81, 846, 998
MspR9I CCNGG 2 cut(s) 747, 963
MvaI CCWGG 2 cut(s) 747, 963
MwoI GCNNNNNNNGC 6 cut(s) 69, 194, 290, 782, 1037, 1094
NdeI CATATG 2 cut(s) 930, 1339
NdeII GATC 4 cut(s) 113, 299, 1048, 1229
NlaIV GGNNCC 4 cut(s) 450, 713, 975, 996
NmuCI GTSAC 1 cut(s) 1379
NsiI ATGCAT 1 cut(s) 1203
NspI RCATGY 4 cut(s) 188, 616, 1201, 1448
NspV TTCGAA 1 cut(s) 1253
PaeI GCATGC 1 cut(s) 188
PaeR7I CTCGAG 1 cut(s) 1475
PciSI GCTCTTC 1 cut(s) 1311
PcsI WCGNNNNNNNCGW 1 cut(s) 54
PfeI GAWTC 3 cut(s) 329, 387, 1332
PfoI TCCNGGA 1 cut(s) 745
PkrI GCNGC 5 cut(s) 199, 265, 784, 1099, 1412
PleI GAGTC 2 cut(s) 496, 1494
PmaCI CACGTG 1 cut(s) 270
PmlI CACGTG 1 cut(s) 270
PpsI GAGTC 2 cut(s) 496, 1494
Ppu21I YACGTR 2 cut(s) 270, 563
Psp6I CCWGG 2 cut(s) 745, 961
PspCI CACGTG 1 cut(s) 270
PspGI CCWGG 2 cut(s) 745, 961
PspN4I GGNNCC 4 cut(s) 450, 713, 975, 996
PspPI GGNCC 2 cut(s) 358, 974
PsuI RGATCY 3 cut(s) 113, 299, 1229
RsaI GTAC 2 cut(s) 419, 1345
RsaNI GTAC 2 cut(s) 418, 1344
RseI CAYNNNNRTG 1 cut(s) 846
SalI GTCGAC 1 cut(s) 53
SapI GCTCTTC 1 cut(s) 1311
SaqAI TTAA 3 cut(s) 17, 399, 483
SatI GCNGC 5 cut(s) 198, 264, 783, 1098, 1411
Sau3AI GATC 4 cut(s) 113, 299, 1048, 1229
Sau96I GGNCC 2 cut(s) 358, 974
ScaI AGTACT 1 cut(s) 419
SchI GAGTC 2 cut(s) 497, 1495
ScrFI CCNGG 2 cut(s) 747, 963
SduI GDGCHC 4 cut(s) 275, 575, 714, 893
SfaNI GCATC 2 cut(s) 280, 826
SfcI CTRYAG 1 cut(s) 538
Sfr274I CTCGAG 1 cut(s) 1475
SfuI TTCGAA 1 cut(s) 1253
SinI GGWCC 1 cut(s) 358
SlaI CTCGAG 1 cut(s) 1475
SmiMI CAYNNNNRTG 1 cut(s) 846
SmlI CTYRAG 3 cut(s) 482, 520, 1475
SmoI CTYRAG 3 cut(s) 482, 520, 1475
SpeI ACTAGT 1 cut(s) 122
SphI GCATGC 1 cut(s) 188
Sse9I AATT 5 cut(s) 400, 684, 1249, 1323, 1386
SsiI CCGC 5 cut(s) 9, 284, 429, 780, 1410
SspMI CTAG 2 cut(s) 110, 123
StyD4I CCNGG 2 cut(s) 745, 961
TaaI ACNGT 4 cut(s) 155, 313, 422, 580
TaiI ACGT 5 cut(s) 60, 272, 565, 1289, 1351
TaqI TCGA 6 cut(s) 54, 90, 895, 1059, 1253, 1476
TasI AATT 5 cut(s) 400, 684, 1249, 1323, 1386
TatI WGTACW 1 cut(s) 417
TauI GCSGC 1 cut(s) 1413
TfiI GAWTC 3 cut(s) 329, 387, 1332
Tru1I TTAA 3 cut(s) 17, 399, 483
Tru9I TTAA 3 cut(s) 17, 399, 483
TscAI CASTG 4 cut(s) 70, 318, 762, 1401
TseFI GTSAC 1 cut(s) 1379
TseI GCWGC 4 cut(s) 197, 263, 782, 1097
Tsp45I GTSAC 1 cut(s) 1379
TspDTI ATGAA 1 cut(s) 1423
TspGWI ACGGA 3 cut(s) 18, 28, 1236
TspRI CASTG 4 cut(s) 70, 318, 762, 1401
Vha464I CTTAAG 1 cut(s) 482
VneI GTGCAC 1 cut(s) 571
VpaK11BI GGWCC 1 cut(s) 358
XapI RAATTY 1 cut(s) 1249
XceI RCATGY 4 cut(s) 188, 616, 1201, 1448
XcmI CCANNNNNNNNNTGG 3 cut(s) 135, 462, 722
XhoI CTCGAG 1 cut(s) 1475
XmiI GTMKAC 1 cut(s) 54
XspI CTAG 2 cut(s) 110, 123
ZrmI AGTACT 1 cut(s) 419
Zsp2I ATGCAT 1 cut(s) 1203
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.