RchiOBHm_Chr4g0405021

FGGY carbohydrate kinase domain-containing

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Forward (+)
25076337 .. 25078730
2394 bp
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UTR
Exon/CDS
Intron
PRQ37653

Sequence Viewer

Length: 369 bp
ATGCCCCTGTTTCTTGGTCTTTGTTTGTATCATGTGTTTTTCATCTGCTTACTCTTTTCTAATTTGCCTCTCTTTATCTCCGTTTGTATGAAACATCAAAACAAAGTTTATTCTTATGCTTCAACTTTTACATTAAGCATATTGCTGGACTATCTTCCTTTAATTACAATGCCTGTGCTATTGGGTGCTGCCATTCTTGGTGCTGTAGCTGCAAGGAAATATTTTAGTATGCATGATGCCATGAAGGCCCTGAATGCTTCGGGGCAGGTCATCCATCCATCCAAAGACCCTAAGGTGAAGAAGTACCATGATGCTAAGTACCGCATTTTTGTGACCTTTATGACCAGCAGCTATCTCATTGTTCGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

122

Amino Acids

13.84

Weight (kDa)

9.57

Isoelectric Point (pI)

40.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 256
AciI CCGC 1 cut(s) 322
AfaI GTAC 2 cut(s) 305, 320
AgsI TTSAA 1 cut(s) 123
AluBI AGCT 2 cut(s) 209, 351
AluI AGCT 2 cut(s) 209, 351
AoxI GGCC 1 cut(s) 246
ApeKI GCWGC 3 cut(s) 188, 209, 348
AspS9I GGNCC 1 cut(s) 247
AsuHPI GGTGA 1 cut(s) 307
AxyI CCTNAGG 1 cut(s) 291
BbvI GCAGC 3 cut(s) 175, 196, 360
BccI CCATC 2 cut(s) 282, 286
BfmI CTRYAG 1 cut(s) 204
BfuAI ACCTGC 1 cut(s) 256
BglI GCCNNNNNGGC 1 cut(s) 245
BisI GCNGC 3 cut(s) 189, 210, 349
BlsI GCNGC 3 cut(s) 190, 211, 350
BmgT120I GGNCC 1 cut(s) 247
BmsI GCATC 2 cut(s) 226, 301
Bse21I CCTNAGG 1 cut(s) 291
BseGI GGATG 3 cut(s) 270, 274, 278
BseXI GCAGC 3 cut(s) 175, 196, 360
BshFI GGCC 1 cut(s) 248
BsmI GAATGC 1 cut(s) 259
BsnI GGCC 1 cut(s) 248
BspACI CCGC 1 cut(s) 322
BspANI GGCC 1 cut(s) 248
BspMI ACCTGC 1 cut(s) 256
BstDEI CTNAG 2 cut(s) 291, 315
BstF5I GGATG 3 cut(s) 270, 274, 278
BstMWI GCNNNNNNNGC 3 cut(s) 209, 245, 254
BstSFI CTRYAG 1 cut(s) 204
BstV1I GCAGC 3 cut(s) 175, 196, 360
Bsu36I CCTNAGG 1 cut(s) 291
BsuRI GGCC 1 cut(s) 248
BtsCI GGATG 3 cut(s) 270, 274, 278
BveI ACCTGC 1 cut(s) 256
Cfr13I GGNCC 1 cut(s) 247
Csp6I GTAC 2 cut(s) 304, 319
CviAII CATG 4 cut(s) 32, 233, 241, 308
CviJI RGCY 3 cut(s) 209, 248, 351
CviKI_1 RGCY 3 cut(s) 209, 248, 351
CviQI GTAC 2 cut(s) 304, 319
DdeI CTNAG 2 cut(s) 291, 315
Eco81I CCTNAGG 1 cut(s) 291
EcoO109I RGGNCCY 1 cut(s) 247
EcoT22I ATGCAT 1 cut(s) 234
FaeI CATG 4 cut(s) 35, 236, 244, 311
FaiI YATR 9 cut(s) 33, 89, 117, 140, 230, 234, 242, 309, 341
FatI CATG 4 cut(s) 31, 232, 240, 307
Fnu4HI GCNGC 3 cut(s) 189, 210, 349
FokI GGATG 3 cut(s) 257, 261, 265
Fsp4HI GCNGC 3 cut(s) 189, 210, 349
GluI GCNGC 3 cut(s) 189, 210, 349
HaeIII GGCC 1 cut(s) 248
Hin1II CATG 4 cut(s) 35, 236, 244, 311
HphI GGTGA 1 cut(s) 307
HpyAV CCTTC 1 cut(s) 238
HpyCH4V TGCA 2 cut(s) 212, 232
HpyF10VI GCNNNNNNNGC 3 cut(s) 209, 245, 254
HpyF3I CTNAG 2 cut(s) 291, 315
Hsp92II CATG 4 cut(s) 35, 236, 244, 311
LpnPI CCDG 6 cut(s) 20, 131, 186, 251, 263, 358
Lsp1109I GCAGC 3 cut(s) 175, 196, 360
LweI GCATC 2 cut(s) 226, 301
MaeIII GTNAC 1 cut(s) 331
MboII GAAGA 2 cut(s) 146, 310
MluCI AATT 2 cut(s) 61, 162
MnlI CCTC 1 cut(s) 78
Mph1103I ATGCAT 1 cut(s) 234
MseI TTAA 2 cut(s) 134, 161
MslI CAYNNNNRTG 1 cut(s) 329
Mva1269I GAATGC 1 cut(s) 259
MwoI GCNNNNNNNGC 3 cut(s) 209, 245, 254
NlaIII CATG 4 cut(s) 35, 236, 244, 311
NmuCI GTSAC 1 cut(s) 331
NsiI ATGCAT 1 cut(s) 234
PctI GAATGC 1 cut(s) 259
PkrI GCNGC 3 cut(s) 190, 211, 350
PspPI GGNCC 1 cut(s) 247
RsaI GTAC 2 cut(s) 305, 320
RsaNI GTAC 2 cut(s) 304, 319
RseI CAYNNNNRTG 1 cut(s) 329
SaqAI TTAA 2 cut(s) 134, 161
SatI GCNGC 3 cut(s) 189, 210, 349
Sau96I GGNCC 1 cut(s) 247
SetI ASST 5 cut(s) 211, 270, 297, 338, 353
SfaNI GCATC 2 cut(s) 226, 301
SfcI CTRYAG 1 cut(s) 204
SmiMI CAYNNNNRTG 1 cut(s) 329
Sse9I AATT 2 cut(s) 61, 162
SsiI CCGC 1 cut(s) 322
SspI AATATT 1 cut(s) 221
TasI AATT 2 cut(s) 61, 162
Tru1I TTAA 2 cut(s) 134, 161
Tru9I TTAA 2 cut(s) 134, 161
TseFI GTSAC 1 cut(s) 331
TseI GCWGC 3 cut(s) 188, 209, 348
Tsp45I GTSAC 1 cut(s) 331
TspDTI ATGAA 3 cut(s) 31, 104, 257
TspGWI ACGGA 1 cut(s) 70
Zsp2I ATGCAT 1 cut(s) 234
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.