Rh4AG127000

FGGY carbohydrate kinase domain-containing

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
OG0002316
Physical Location & Seq
Forward (+)
27548895 .. 27551532
2638 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG127000.1

Sequence Viewer

Length: 690 bp
ATGGACTCGTTCCGATCCAACGCCACTCCTTCGCCCACAACCCCATCCATCACAACGCTCCTCCCCCTCAAACGCTTATTCCTCATACTCCTCTATCTCTCTCGAAATGACCTCCGCCGTCGCGCAGGTGTGTTTGATGAGAATGGGAAGCTTCTAGGTTCGTCTAGCAGTCCGATTCAGATTTGGAAGGACGGTGATTGCGTTGAGGGTCTGGGATTTGCGGCTACTTGTTCACTAGTTGCAGTGGATGCTGATGGCTCTCCTGTTACGGTTTCCTGGAGTGGTGATTCAAGAAGAAACATAATAGTATGGATGGGCCATAGAGCTGTAGAACAAGCTGAAAGGATCAATTCACGCAACTCACCCGTCCTGCAGTACTGTGGTGGAGCTCTTTCCCCTGAGATGCAGCCTCCAAAGCTTTTATGGGTGAAAGAAAATCTGCCAGAATCTTGGTCAATGGTCTTCAGGTGGATGGACTTGAGTGATTGGTTATCATACAGGGCCACAGGAGATGATACACGTAGTCTCTGTACAACAGTTTGCAAATGGACATATCTTGGTCATGCACATTTGCAGCAAAACAATGAGAAAGATTCTCGAGACATGGAAGCTTGTGGATGGGATGATGATTTCTGGGAGGAGATTGGATTAGGTGATCTTGTAGAAGGGCATCATGCTAAGATAGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FGGY_C FGGY_N

Protein Analysis

229

Amino Acids

25.66

Weight (kDa)

5.24

Isoelectric Point (pI)

63.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FGGY_N PF00370 99 - 175 2.9e-06 FGGY family of carbohydrate kinases, N-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 116
Acc36I ACCTGC 1 cut(s) 116
AccII CGCG 1 cut(s) 123
AciI CCGC 2 cut(s) 115, 221
AclWI GGATC 2 cut(s) 9, 353
AcuI CTGAAG 1 cut(s) 448
AfaI GTAC 2 cut(s) 377, 532
AflIII ACRYGT 1 cut(s) 518
AgsI TTSAA 1 cut(s) 291
AhlI ACTAGT 1 cut(s) 235
AjnI CCWGG 1 cut(s) 275
AluBI AGCT 6 cut(s) 151, 326, 338, 389, 418, 611
AluI AGCT 6 cut(s) 151, 326, 338, 389, 418, 611
Alw21I GWGCWC 1 cut(s) 391
Alw26I GTCTC 2 cut(s) 530, 594
AlwI GGATC 2 cut(s) 9, 353
Ama87I CYCGRG 1 cut(s) 597
AoxI GGCC 2 cut(s) 316, 501
ApeKI GCWGC 2 cut(s) 406, 574
AspLEI GCGC 1 cut(s) 125
AspS9I GGNCC 2 cut(s) 316, 501
AsuHPI GGTGA 5 cut(s) 206, 296, 354, 439, 665
AvaI CYCGRG 1 cut(s) 597
BanII GRGCYC 1 cut(s) 391
BbsI GAAGAC 1 cut(s) 454
Bbv12I GWGCWC 1 cut(s) 391
BbvI GCAGC 2 cut(s) 418, 586
BccI CCATC 6 cut(s) 52, 56, 248, 307, 466, 612
BceAI ACGGC 1 cut(s) 102
BciT130I CCWGG 1 cut(s) 277
BcoDI GTCTC 2 cut(s) 530, 594
BcuI ACTAGT 1 cut(s) 235
BfaI CTAG 3 cut(s) 155, 165, 236
BfmI CTRYAG 2 cut(s) 327, 371
BfuAI ACCTGC 1 cut(s) 116
BisI GCNGC 3 cut(s) 222, 407, 575
BlsI GCNGC 3 cut(s) 223, 408, 576
BmcAI AGTACT 1 cut(s) 377
Bme1390I CCNGG 1 cut(s) 277
BmeT110I CYCGRG 1 cut(s) 597
BmgT120I GGNCC 2 cut(s) 316, 501
BmrFI CCNGG 1 cut(s) 277
BmsI GCATC 3 cut(s) 238, 393, 679
BpiI GAAGAC 1 cut(s) 454
BpmI CTGGAG 1 cut(s) 298
BpuEI CTTGAG 1 cut(s) 499
BsaAI YACGTR 1 cut(s) 521
BseBI CCWGG 1 cut(s) 277
BseGI GGATG 6 cut(s) 44, 253, 318, 477, 623, 628
BseMII CTCAG 1 cut(s) 390
BseRI GAGGAG 3 cut(s) 50, 80, 653
BseXI GCAGC 2 cut(s) 418, 586
Bsh1236I CGCG 1 cut(s) 123
BshFI GGCC 2 cut(s) 318, 503
BsiHKAI GWGCWC 1 cut(s) 391
BsiHKCI CYCGRG 1 cut(s) 597
BsmAI GTCTC 2 cut(s) 530, 594
BsnI GGCC 2 cut(s) 318, 503
BsoBI CYCGRG 1 cut(s) 597
Bsp1286I GDGCHC 1 cut(s) 391
Bsp1407I TGTACA 1 cut(s) 530
Bsp143I GATC 3 cut(s) 14, 345, 655
BspACI CCGC 2 cut(s) 115, 221
BspANI GGCC 2 cut(s) 318, 503
BspCNI CTCAG 1 cut(s) 391
BspFNI CGCG 1 cut(s) 123
BspMAI CTGCAG 1 cut(s) 375
BspMI ACCTGC 1 cut(s) 116
BspPI GGATC 2 cut(s) 9, 353
BsrGI TGTACA 1 cut(s) 530
BssMI GATC 3 cut(s) 14, 345, 655
Bst2UI CCWGG 1 cut(s) 277
Bst4CI ACNGT 4 cut(s) 194, 271, 380, 538
BstAPI GCANNNNNTGC 1 cut(s) 248
BstAUI TGTACA 1 cut(s) 530
BstBAI YACGTR 1 cut(s) 521
BstDEI CTNAG 2 cut(s) 399, 678
BstF5I GGATG 6 cut(s) 44, 253, 318, 477, 623, 628
BstFNI CGCG 1 cut(s) 123
BstHHI GCGC 1 cut(s) 125
BstKTI GATC 3 cut(s) 17, 348, 658
BstMAI GTCTC 2 cut(s) 530, 594
BstMBI GATC 3 cut(s) 14, 345, 655
BstMWI GCNNNNNNNGC 2 cut(s) 248, 415
BstNI CCWGG 1 cut(s) 277
BstSCI CCNGG 1 cut(s) 275
BstSFI CTRYAG 2 cut(s) 327, 371
BstUI CGCG 1 cut(s) 123
BstV1I GCAGC 2 cut(s) 418, 586
BstV2I GAAGAC 1 cut(s) 454
BstXI CCANNNNNNTGG 1 cut(s) 450
BsuRI GGCC 2 cut(s) 318, 503
BtsCI GGATG 6 cut(s) 44, 253, 318, 477, 623, 628
BtsI GCAGTG 1 cut(s) 249
BtsIMutI CAGTG 1 cut(s) 249
BveI ACCTGC 1 cut(s) 116
CfoI GCGC 1 cut(s) 125
Cfr13I GGNCC 2 cut(s) 316, 501
Csp6I GTAC 2 cut(s) 376, 531
CviAII CATG 3 cut(s) 563, 604, 674
CviQI GTAC 2 cut(s) 376, 531
DdeI CTNAG 2 cut(s) 399, 678
DpnI GATC 3 cut(s) 16, 347, 657
DpnII GATC 3 cut(s) 14, 345, 655
EciI GGCGGA 1 cut(s) 104
Ecl136II GAGCTC 1 cut(s) 389
Eco24I GRGCYC 1 cut(s) 391
Eco53kI GAGCTC 1 cut(s) 389
Eco57I CTGAAG 1 cut(s) 448
Eco88I CYCGRG 1 cut(s) 597
EcoICRI GAGCTC 1 cut(s) 389
EcoRII CCWGG 1 cut(s) 275
EcoT38I GRGCYC 1 cut(s) 391
FaeI CATG 3 cut(s) 566, 607, 677
FatI CATG 3 cut(s) 562, 603, 673
Fnu4HI GCNGC 3 cut(s) 222, 407, 575
FokI GGATG 6 cut(s) 31, 260, 325, 484, 630, 635
FriOI GRGCYC 1 cut(s) 391
Fsp4HI GCNGC 3 cut(s) 222, 407, 575
FspBI CTAG 3 cut(s) 155, 165, 236
GlaI GCGC 1 cut(s) 124
GluI GCNGC 3 cut(s) 222, 407, 575
GsuI CTGGAG 1 cut(s) 298
HaeIII GGCC 2 cut(s) 318, 503
HhaI GCGC 1 cut(s) 125
Hin1II CATG 3 cut(s) 566, 607, 677
Hin6I GCGC 1 cut(s) 123
HinP1I GCGC 1 cut(s) 123
HindIII AAGCTT 3 cut(s) 149, 416, 609
HinfI GANTC 5 cut(s) 5, 175, 287, 446, 593
HphI GGTGA 5 cut(s) 206, 296, 354, 439, 665
Hpy166II GTNNAC 1 cut(s) 233
Hpy188I TCNGA 3 cut(s) 14, 174, 180
Hpy188III TCNNGA 4 cut(s) 102, 291, 597, 599
Hpy8I GTNNAC 1 cut(s) 233
Hpy99I CGWCG 1 cut(s) 123
HpyAV CCTTC 3 cut(s) 39, 181, 659
HpyCH4III ACNGT 4 cut(s) 194, 271, 380, 538
HpyCH4IV ACGT 1 cut(s) 520
HpyCH4V TGCA 6 cut(s) 242, 373, 406, 543, 566, 574
HpyF10VI GCNNNNNNNGC 2 cut(s) 248, 415
HpyF3I CTNAG 2 cut(s) 399, 678
HpySE526I ACGT 1 cut(s) 520
Hsp92II CATG 3 cut(s) 566, 607, 677
HspAI GCGC 1 cut(s) 123
Kzo9I GATC 3 cut(s) 14, 345, 655
LmnI GCTCC 2 cut(s) 63, 386
Lsp1109I GCAGC 2 cut(s) 418, 586
LweI GCATC 3 cut(s) 238, 393, 679
MaeI CTAG 3 cut(s) 155, 165, 236
MaeII ACGT 1 cut(s) 520
MaeIII GTNAC 1 cut(s) 265
MalI GATC 3 cut(s) 16, 347, 657
MboI GATC 3 cut(s) 14, 345, 655
MboII GAAGA 2 cut(s) 306, 454
MhlI GDGCHC 1 cut(s) 391
MluCI AATT 1 cut(s) 349
MmeI TCCRAC 1 cut(s) 42
MnlI CCTC 8 cut(s) 71, 77, 92, 101, 122, 199, 420, 631
MspR9I CCNGG 1 cut(s) 277
MvaI CCWGG 1 cut(s) 277
MvnI CGCG 1 cut(s) 123
MwoI GCNNNNNNNGC 2 cut(s) 248, 415
NdeII GATC 3 cut(s) 14, 345, 655
NlaIII CATG 3 cut(s) 566, 607, 677
PaeR7I CTCGAG 1 cut(s) 597
PaqCI CACCTGC 1 cut(s) 116
PcsI WCGNNNNNNNCGW 1 cut(s) 198
PfeI GAWTC 4 cut(s) 175, 287, 446, 593
PfoI TCCNGGA 1 cut(s) 275
PkrI GCNGC 3 cut(s) 223, 408, 576
Ppu21I YACGTR 1 cut(s) 521
Psp124BI GAGCTC 1 cut(s) 391
Psp6I CCWGG 1 cut(s) 275
PspGI CCWGG 1 cut(s) 275
PspPI GGNCC 2 cut(s) 316, 501
PstI CTGCAG 1 cut(s) 375
RsaI GTAC 2 cut(s) 377, 532
RsaNI GTAC 2 cut(s) 376, 531
SacI GAGCTC 1 cut(s) 391
SatI GCNGC 3 cut(s) 222, 407, 575
Sau3AI GATC 3 cut(s) 14, 345, 655
Sau96I GGNCC 2 cut(s) 316, 501
ScaI AGTACT 1 cut(s) 377
ScrFI CCNGG 1 cut(s) 277
SduI GDGCHC 1 cut(s) 391
SfaNI GCATC 3 cut(s) 238, 393, 679
SfcI CTRYAG 2 cut(s) 327, 371
Sfr274I CTCGAG 1 cut(s) 597
SlaI CTCGAG 1 cut(s) 597
SmlI CTYRAG 2 cut(s) 478, 597
SmoI CTYRAG 2 cut(s) 478, 597
SpeI ACTAGT 1 cut(s) 235
Sse9I AATT 1 cut(s) 349
SsiI CCGC 2 cut(s) 115, 221
SspMI CTAG 3 cut(s) 155, 165, 236
SstI GAGCTC 1 cut(s) 391
StyD4I CCNGG 1 cut(s) 275
TaaI ACNGT 4 cut(s) 194, 271, 380, 538
TaiI ACGT 1 cut(s) 523
TaqI TCGA 2 cut(s) 103, 598
TasI AATT 1 cut(s) 349
TatI WGTACW 2 cut(s) 375, 530
TauI GCSGC 1 cut(s) 224
TfiI GAWTC 4 cut(s) 175, 287, 446, 593
TscAI CASTG 1 cut(s) 249
TseI GCWGC 2 cut(s) 406, 574
TspRI CASTG 1 cut(s) 249
XcmI CCANNNNNNNNNTGG 1 cut(s) 420
XhoI CTCGAG 1 cut(s) 597
XspI CTAG 3 cut(s) 155, 165, 236
ZrmI AGTACT 1 cut(s) 377
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.