Rh4BG121100

FGGY carbohydrate kinase domain-containing

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
OG0002316
Physical Location & Seq
Forward (+)
20236013 .. 20255111
19099 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG121100.1

Sequence Viewer

Length: 1116 bp
ATGCAGCCTCCAAAGCTTTTATGGGTGAAAGAAAATCTGCCAGAATCTTGGTCAATGGTCTTCAGGTGGATGGACTTGAGTGATTGGTTATCATACAGGGCCACAGGAGATGATACACCTTGTGGATGGGATGATGATTTCTGGGAGGAGATTGGATTAGGTGATCTTGTAGAAGGGCATCATGCTAAGATAGTGGCGTTTTGTAAGCTGATCGATATAACTTGCTGTGAATTCTTCTGCCATTTAGCATTGAGGACGAATTGTAGCCTTCCCTGGCCATCCTCTGGGTTCCGATTTCTCATTGATTTCAATTGGCGCTCCCTTGAGGAACTAGGTCTTGTAGCAGGGATTCCTGTTGGGACTTCGCTAATTGATGCTCATGCCGGTGGTGTGGGGGTATTGGAAAGTGTGCCTTCATCAGATTCTCAGCCTAAAGCTGTGGTAACTGAACAATGGCTCACAGAAGGTGGTCAGAGTGCTACGGGTGCATTATTGGATTACATAATTGAAAACCATGTTGCTTCTCCTCACCTTGCCAAGCATGCTGCTTCTCAACGCATTTCTGTGTTTGAACTTCTGAACAAGATATTGGAAACAACGATGCATGAACTGAAGCGTCCGTTCCTTGCTTCTTTGACCGAAGATATTCATGTTCTTCCTGATTTTCATGGGAACAGGTCACCAATTGCAGATCCAAAAGCAAAAGGATTTATCTGTGGTTTAACACTTGATACAAGTGAGAAGCAATTGGCACTTCAATACCTCGCCACACTGCAAGGTATTGCATATGGCACTCGCCATATTGTAGAGCACTGCAATGCCCAGGGTCACAAAATTGACACTATACTAGCATGTGGAGGCCTTGTTAAGAACCCACTATTCATACAAGAACACGCAGATATAATTGGTTGCCCTATTATTCTTCCATGCGAGAGTGAGCCTGTGCTATTGGGTGCTGCCATTCTTGGTGCTGTAGCTGCAAGGAAATATTTTAGTATGCATGATGCCATGAAGGCCCTGAATACTTCGGGGCAGGTCATCCATCCATCCAAAGACCCTAAGGTGAAGAAGTACCATGATGCCAAGTACCGCATTTTTTGTGACCTTTATGACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FGGY_C FGGY_N

Protein Analysis

371

Amino Acids

41.04

Weight (kDa)

5.61

Isoelectric Point (pI)

45.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FGGY_C PF02782 147 - 327 3.2e-44 FGGY family of carbohydrate kinases, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1024
AccB7I CCANNNNNTGG 1 cut(s) 284
AciI CCGC 1 cut(s) 1090
AclWI GGATC 1 cut(s) 686
AcoI YGGCCR 1 cut(s) 275
AcsI RAATTY 1 cut(s) 230
AcuI CTGAAG 2 cut(s) 46, 632
AdeI CACNNNGTG 1 cut(s) 122
AfaI GTAC 2 cut(s) 1073, 1088
AfiI CCNNNNNNNGG 1 cut(s) 284
AgsI TTSAA 4 cut(s) 310, 509, 572, 758
AjnI CCWGG 2 cut(s) 272, 822
AjuI GAANNNNNNNTTGG 2 cut(s) 572, 604
AluBI AGCT 4 cut(s) 16, 208, 437, 977
AluI AGCT 4 cut(s) 16, 208, 437, 977
Alw21I GWGCWC 1 cut(s) 813
AlwI GGATC 1 cut(s) 686
AoxI GGCC 4 cut(s) 99, 275, 859, 1014
ApeKI GCWGC 4 cut(s) 4, 545, 956, 977
ApoI RAATTY 1 cut(s) 230
Asp700I GAANNNNTTC 1 cut(s) 645
AspLEI GCGC 1 cut(s) 318
AspS9I GGNCC 2 cut(s) 99, 1015
AsuHPI GGTGA 5 cut(s) 37, 173, 521, 672, 1075
AxyI CCTNAGG 1 cut(s) 1059
BalI TGGCCA 1 cut(s) 277
BbsI GAAGAC 1 cut(s) 52
Bbv12I GWGCWC 1 cut(s) 813
BbvI GCAGC 4 cut(s) 16, 532, 943, 964
BccI CCATC 5 cut(s) 64, 120, 286, 1050, 1054
BciT130I CCWGG 2 cut(s) 274, 824
BfaI CTAG 3 cut(s) 332, 848, 1114
BfmI CTRYAG 1 cut(s) 972
BfoI RGCGCY 1 cut(s) 319
BfuAI ACCTGC 1 cut(s) 1024
BglI GCCNNNNNGGC 1 cut(s) 1013
BisI GCNGC 4 cut(s) 5, 546, 957, 978
BlsI GCNGC 4 cut(s) 6, 547, 958, 979
Bme1390I CCNGG 2 cut(s) 274, 824
BmgT120I GGNCC 2 cut(s) 99, 1015
BmiI GGNNCC 1 cut(s) 290
BmrFI CCNGG 2 cut(s) 274, 824
BmsI GCATC 5 cut(s) 187, 364, 591, 994, 1069
BpiI GAAGAC 1 cut(s) 52
BpuEI CTTGAG 2 cut(s) 97, 344
Bsa29I ATCGAT 1 cut(s) 213
BsaJI CCNNGG 3 cut(s) 272, 822, 823
BsaXI ACNNNNNCTCC 2 cut(s) 849, 879
Bsc4I CCNNNNNNNGG 1 cut(s) 284
Bse118I RCCGGY 1 cut(s) 383
Bse21I CCTNAGG 1 cut(s) 1059
Bse3DI GCAATG 1 cut(s) 823
BseBI CCWGG 2 cut(s) 274, 824
BseCI ATCGAT 1 cut(s) 213
BseDI CCNNGG 3 cut(s) 272, 822, 823
BseGI GGATG 7 cut(s) 75, 131, 136, 278, 1038, 1042, 1046
BseLI CCNNNNNNNGG 1 cut(s) 284
BseMI GCAATG 1 cut(s) 823
BseMII CTCAG 1 cut(s) 440
BseRI GAGGAG 2 cut(s) 161, 516
BseXI GCAGC 4 cut(s) 16, 532, 943, 964
BshFI GGCC 4 cut(s) 101, 277, 861, 1016
BshVI ATCGAT 1 cut(s) 213
BsiHKAI GWGCWC 1 cut(s) 813
BsiSI CCGG 1 cut(s) 384
BslFI GGGAC 1 cut(s) 373
BslI CCNNNNNNNGG 1 cut(s) 284
BsmFI GGGAC 1 cut(s) 373
BsnI GGCC 4 cut(s) 101, 277, 861, 1016
Bsp1286I GDGCHC 1 cut(s) 813
Bsp143I GATC 3 cut(s) 163, 210, 691
BspACI CCGC 1 cut(s) 1090
BspANI GGCC 4 cut(s) 101, 277, 861, 1016
BspCNI CTCAG 1 cut(s) 439
BspDI ATCGAT 1 cut(s) 213
BspLI GGNNCC 1 cut(s) 290
BspMI ACCTGC 1 cut(s) 1024
BspPI GGATC 1 cut(s) 686
BsrDI GCAATG 1 cut(s) 823
BsrFI RCCGGY 1 cut(s) 383
BssAI RCCGGY 1 cut(s) 383
BssECI CCNNGG 3 cut(s) 272, 822, 823
BssMI GATC 3 cut(s) 163, 210, 691
Bst2UI CCWGG 2 cut(s) 274, 824
BstC8I GCNNGC 1 cut(s) 543
BstDEI CTNAG 3 cut(s) 186, 426, 1059
BstEII GGTNACC 1 cut(s) 678
BstF5I GGATG 7 cut(s) 75, 131, 136, 278, 1038, 1042, 1046
BstH2I RGCGCY 1 cut(s) 319
BstHHI GCGC 1 cut(s) 318
BstKTI GATC 3 cut(s) 166, 213, 694
BstMBI GATC 3 cut(s) 163, 210, 691
BstMWI GCNNNNNNNGC 5 cut(s) 13, 485, 542, 977, 1013
BstNI CCWGG 2 cut(s) 274, 824
BstNSI RCATGY 2 cut(s) 545, 855
BstPI GGTNACC 1 cut(s) 678
BstSCI CCNGG 2 cut(s) 272, 822
BstSFI CTRYAG 1 cut(s) 972
BstV1I GCAGC 4 cut(s) 16, 532, 943, 964
BstV2I GAAGAC 1 cut(s) 52
BstX2I RGATCY 1 cut(s) 691
BstXI CCANNNNNNTGG 1 cut(s) 48
BstYI RGATCY 1 cut(s) 691
Bsu15I ATCGAT 1 cut(s) 213
Bsu36I CCTNAGG 1 cut(s) 1059
BsuRI GGCC 4 cut(s) 101, 277, 861, 1016
BsuTUI ATCGAT 1 cut(s) 213
BtsCI GGATG 7 cut(s) 75, 131, 136, 278, 1038, 1042, 1046
BtsI GCAGTG 2 cut(s) 770, 811
BtsIMutI CAGTG 2 cut(s) 770, 811
BveI ACCTGC 1 cut(s) 1024
Cac8I GCNNGC 1 cut(s) 543
CfoI GCGC 1 cut(s) 318
Cfr10I RCCGGY 1 cut(s) 383
Cfr13I GGNCC 2 cut(s) 99, 1015
ClaI ATCGAT 1 cut(s) 213
CseI GACGC 1 cut(s) 605
Csp6I GTAC 2 cut(s) 1072, 1087
CviQI GTAC 2 cut(s) 1072, 1087
DdeI CTNAG 3 cut(s) 186, 426, 1059
DpnI GATC 3 cut(s) 165, 212, 693
DpnII GATC 3 cut(s) 163, 210, 691
DraIII CACNNNGTG 1 cut(s) 122
EaeI YGGCCR 1 cut(s) 275
Eco147I AGGCCT 1 cut(s) 861
Eco57I CTGAAG 2 cut(s) 46, 632
Eco81I CCTNAGG 1 cut(s) 1059
Eco91I GGTNACC 1 cut(s) 678
EcoO109I RGGNCCY 1 cut(s) 1015
EcoO65I GGTNACC 1 cut(s) 678
EcoRI GAATTC 1 cut(s) 230
EcoRII CCWGG 2 cut(s) 272, 822
EcoT22I ATGCAT 2 cut(s) 606, 1002
FalI AAGNNNNNCTT 2 cut(s) 397, 429
FaqI GGGAC 1 cut(s) 373
FauNDI CATATG 1 cut(s) 787
Fnu4HI GCNGC 4 cut(s) 5, 546, 957, 978
FokI GGATG 7 cut(s) 82, 138, 143, 265, 1025, 1029, 1033
Fsp4HI GCNGC 4 cut(s) 5, 546, 957, 978
FspBI CTAG 3 cut(s) 332, 848, 1114
GlaI GCGC 1 cut(s) 317
GluI GCNGC 4 cut(s) 5, 546, 957, 978
HaeII RGCGCY 1 cut(s) 319
HaeIII GGCC 4 cut(s) 101, 277, 861, 1016
HapII CCGG 1 cut(s) 384
HgaI GACGC 1 cut(s) 605
HhaI GCGC 1 cut(s) 318
Hin6I GCGC 1 cut(s) 316
HinP1I GCGC 1 cut(s) 316
HindIII AAGCTT 1 cut(s) 14
HinfI GANTC 3 cut(s) 44, 349, 422
HpaII CCGG 1 cut(s) 384
HphI GGTGA 5 cut(s) 37, 173, 521, 672, 1075
Hpy188I TCNGA 4 cut(s) 293, 421, 474, 579
Hpy188III TCNNGA 1 cut(s) 659
HpyAV CCTTC 5 cut(s) 167, 278, 423, 458, 1006
HpyCH4V TGCA 9 cut(s) 4, 488, 604, 689, 775, 785, 816, 980, 1000
HpyF10VI GCNNNNNNNGC 5 cut(s) 13, 485, 542, 977, 1013
HpyF3I CTNAG 3 cut(s) 186, 426, 1059
HspAI GCGC 1 cut(s) 316
Kzo9I GATC 3 cut(s) 163, 210, 691
LmnI GCTCC 1 cut(s) 323
Lsp1109I GCAGC 4 cut(s) 16, 532, 943, 964
LweI GCATC 5 cut(s) 187, 364, 591, 994, 1069
MaeI CTAG 3 cut(s) 332, 848, 1114
MaeIII GTNAC 4 cut(s) 442, 678, 827, 1100
MalI GATC 3 cut(s) 165, 212, 693
MboI GATC 3 cut(s) 163, 210, 691
MboII GAAGA 6 cut(s) 52, 226, 647, 653, 914, 1078
MfeI CAATTG 3 cut(s) 310, 684, 746
MflI RGATCY 1 cut(s) 691
MhlI GDGCHC 1 cut(s) 813
MlsI TGGCCA 1 cut(s) 277
MluCI AATT 9 cut(s) 230, 259, 310, 369, 504, 684, 746, 834, 903
MluNI TGGCCA 1 cut(s) 277
MnlI CCTC 8 cut(s) 18, 139, 246, 292, 319, 537, 773, 851
Mox20I TGGCCA 1 cut(s) 277
Mph1103I ATGCAT 2 cut(s) 606, 1002
MroXI GAANNNNTTC 1 cut(s) 645
MscI TGGCCA 1 cut(s) 277
MseI TTAA 2 cut(s) 722, 867
MslI CAYNNNNRTG 3 cut(s) 384, 563, 816
Msp20I TGGCCA 1 cut(s) 277
MspI CCGG 1 cut(s) 384
MspR9I CCNGG 2 cut(s) 274, 824
MunI CAATTG 3 cut(s) 310, 684, 746
MvaI CCWGG 2 cut(s) 274, 824
MwoI GCNNNNNNNGC 5 cut(s) 13, 485, 542, 977, 1013
NdeI CATATG 1 cut(s) 787
NdeII GATC 3 cut(s) 163, 210, 691
NlaIV GGNNCC 1 cut(s) 290
NmuCI GTSAC 3 cut(s) 678, 827, 1100
NsiI ATGCAT 2 cut(s) 606, 1002
NspI RCATGY 2 cut(s) 545, 855
PaeI GCATGC 1 cut(s) 545
PasI CCCWGGG 1 cut(s) 823
PceI AGGCCT 1 cut(s) 861
PdmI GAANNNNTTC 1 cut(s) 645
PfeI GAWTC 3 cut(s) 44, 349, 422
PflMI CCANNNNNTGG 1 cut(s) 284
PkrI GCNGC 4 cut(s) 6, 547, 958, 979
Psp6I CCWGG 2 cut(s) 272, 822
PspEI GGTNACC 1 cut(s) 678
PspGI CCWGG 2 cut(s) 272, 822
PspN4I GGNNCC 1 cut(s) 290
PspPI GGNCC 2 cut(s) 99, 1015
PsuI RGATCY 1 cut(s) 691
RsaI GTAC 2 cut(s) 1073, 1088
RsaNI GTAC 2 cut(s) 1072, 1087
RseI CAYNNNNRTG 3 cut(s) 384, 563, 816
SaqAI TTAA 2 cut(s) 722, 867
SatI GCNGC 4 cut(s) 5, 546, 957, 978
Sau3AI GATC 3 cut(s) 163, 210, 691
Sau96I GGNCC 2 cut(s) 99, 1015
ScrFI CCNGG 2 cut(s) 274, 824
SduI GDGCHC 1 cut(s) 813
SfaNI GCATC 5 cut(s) 187, 364, 591, 994, 1069
SfcI CTRYAG 1 cut(s) 972
SmiMI CAYNNNNRTG 3 cut(s) 384, 563, 816
SmlI CTYRAG 2 cut(s) 76, 323
SmoI CTYRAG 2 cut(s) 76, 323
SphI GCATGC 1 cut(s) 545
Sse9I AATT 9 cut(s) 230, 259, 310, 369, 504, 684, 746, 834, 903
SseBI AGGCCT 1 cut(s) 861
SsiI CCGC 1 cut(s) 1090
SspI AATATT 1 cut(s) 989
SspMI CTAG 3 cut(s) 332, 848, 1114
StuI AGGCCT 1 cut(s) 861
StyD4I CCNGG 2 cut(s) 272, 822
TaqI TCGA 1 cut(s) 213
TaqII GACCGA 1 cut(s) 653
TasI AATT 9 cut(s) 230, 259, 310, 369, 504, 684, 746, 834, 903
TfiI GAWTC 3 cut(s) 44, 349, 422
Tru1I TTAA 2 cut(s) 722, 867
Tru9I TTAA 2 cut(s) 722, 867
TscAI CASTG 2 cut(s) 777, 818
TseFI GTSAC 3 cut(s) 678, 827, 1100
TseI GCWGC 4 cut(s) 4, 545, 956, 977
Tsp45I GTSAC 3 cut(s) 678, 827, 1100
TspDTI ATGAA 6 cut(s) 405, 621, 638, 656, 871, 1025
TspGWI ACGGA 1 cut(s) 609
TspRI CASTG 2 cut(s) 777, 818
Van91I CCANNNNNTGG 1 cut(s) 284
XapI RAATTY 1 cut(s) 230
XceI RCATGY 2 cut(s) 545, 855
XcmI CCANNNNNNNNNTGG 1 cut(s) 18
XmnI GAANNNNTTC 1 cut(s) 645
XspI CTAG 3 cut(s) 332, 848, 1114
Zsp2I ATGCAT 2 cut(s) 606, 1002
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.