Rh4CG135200

FGGY carbohydrate kinase domain-containing

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
OG0002316
Physical Location & Seq
Forward (+)
26723740 .. 26738248
14509 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG135200.1

Sequence Viewer

Length: 1062 bp
ATGCTGCTTCTCAACATGAGATCCATTGCTCAACCTAGCATTTCTGTGTTTGAACTTCTGAACAAGATATTGGAAACAACGATGCATGAACTGAAGCGTCCGTTCCTTGCTTCTTTGACTGAAGATATTCATGTTCTTCCTGATTTTCATGGGAACAGTCAAACTGCTAATGTGAGACGATTTACGTCACCAATTGCACATCCAAAAGCAAAAGGATTTATCTGTGGTTTAACACTTGATACAAGTGAGAAGCAATTGGCACTTCAATACCTCGCCACACTGCAAGGTATTGCATATGGCACTCGCCATATTGTAGAGCACTGCAATGCCCAGGGTCACAAAATTGACACTATAGTAGCATGTGGAGGCCTTGTTAAGAACCCACTATTCATACAAGAACATGCAGATATAATTGGTTGCCCTATTATTCTTCCATGGGAGAGTGAGCCTGTGCTATTGGGTGCTGCCATTCTTGGTGCTGTAGCTGCAAGGAAATATTTTAGCATGCATGATGCCATGAAGGCCCTGAATGCTTCAGGGCAGGTCATCCATTCATCCAAAGACCCTAAGGTGAAGAAGTACCATGATGCCAATTGGTGGAACGCTAGTGGACTCACTCCCCGGTTAAATTATGGGCAAGCCTCTTCATTCATTACAATGGAGTATAGCTCAGGGACTATTGAAGACATGGAAAACAGACCGTTTTCAGTTTCAAGTTTGTTCGGGAATGGGGTATCTTTACCAATTAGACATGGCAATAGATCAGGGCCATTGAGAACCATCCGTAGCAAGCCGTCTTTCTACATAGCAAGAGGAAGTATGAGTGAGCATGGAGCCTCCTTCACTCCCTCAAATGACTGCCTCCTTAACTGCGGCTCTTCCTCCAACGCCACCTTCTTCAACGACTTCTTCATCGGAGATTTCAATTCCGGCTCGGGTTTTGTCTTCAACAACAAAATCCCACCTCCAAACTCACCCTCTCCTTACCACACAGCAAGAGGTCTCACCACTGCTTCAAGCTATAGCTTAAGCATCAGGAAAATTGGAACTCACTTGCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FGGY_C FGGY_N

Protein Analysis

353

Amino Acids

38.56

Weight (kDa)

8.97

Isoelectric Point (pI)

46.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FGGY_C PF02782 26 - 163 8.9e-32 FGGY family of carbohydrate kinases, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 532
AccB7I CCANNNNNTGG 1 cut(s) 597
AciI CCGC 1 cut(s) 873
AclWI GGATC 1 cut(s) 15
AcuI CTGAAG 3 cut(s) 113, 141, 519
AfaI GTAC 1 cut(s) 581
AfiI CCNNNNNNNGG 1 cut(s) 597
AflII CTTAAG 1 cut(s) 1027
AgsI TTSAA 8 cut(s) 53, 266, 683, 714, 901, 925, 949, 1017
AjnI CCWGG 1 cut(s) 330
AjuI GAANNNNNNNTTGG 4 cut(s) 53, 85, 878, 910
AluBI AGCT 4 cut(s) 485, 669, 1020, 1026
AluI AGCT 4 cut(s) 485, 669, 1020, 1026
Alw21I GWGCWC 1 cut(s) 321
Alw26I GTCTC 2 cut(s) 169, 1007
AlwI GGATC 1 cut(s) 15
Ama87I CYCGRG 1 cut(s) 934
AoxI GGCC 3 cut(s) 367, 522, 767
ApeKI GCWGC 3 cut(s) 4, 464, 485
Asp700I GAANNNNTTC 1 cut(s) 126
AspS9I GGNCC 2 cut(s) 523, 767
AsuC2I CCSGG 1 cut(s) 622
AsuHPI GGTGA 4 cut(s) 180, 583, 966, 997
AvaI CYCGRG 1 cut(s) 934
AxyI CCTNAGG 1 cut(s) 567
BbsI GAAGAC 2 cut(s) 690, 937
Bbv12I GWGCWC 1 cut(s) 321
BbvI GCAGC 2 cut(s) 451, 472
BccI CCATC 1 cut(s) 788
BceAI ACGGC 1 cut(s) 778
BciT130I CCWGG 1 cut(s) 332
BcnI CCSGG 1 cut(s) 622
BcoDI GTCTC 2 cut(s) 169, 1007
BfaI CTAG 2 cut(s) 36, 606
BfmI CTRYAG 3 cut(s) 351, 480, 1021
BfrI CTTAAG 1 cut(s) 1027
BfuAI ACCTGC 1 cut(s) 532
BglI GCCNNNNNGGC 1 cut(s) 521
BisI GCNGC 4 cut(s) 5, 465, 486, 874
BlsI GCNGC 4 cut(s) 6, 466, 487, 875
Bme1390I CCNGG 2 cut(s) 332, 622
BmeT110I CYCGRG 1 cut(s) 934
BmgT120I GGNCC 2 cut(s) 523, 767
BmiI GGNNCC 1 cut(s) 835
BmrFI CCNGG 2 cut(s) 332, 622
BmsI GCATC 4 cut(s) 72, 502, 577, 1041
BpiI GAAGAC 2 cut(s) 690, 937
BplI GAGNNNNNCTC 2 cut(s) 653, 685
Bpu10I CCTNAGC 1 cut(s) 670
BpuMI CCSGG 1 cut(s) 622
BsaI GGTCTC 1 cut(s) 1007
BsaJI CCNNGG 4 cut(s) 330, 331, 434, 620
BsaXI ACNNNNNCTCC 2 cut(s) 357, 387
Bsc4I CCNNNNNNNGG 1 cut(s) 597
Bse21I CCTNAGG 1 cut(s) 567
Bse3DI GCAATG 2 cut(s) 24, 331
BseBI CCWGG 1 cut(s) 332
BseDI CCNNGG 4 cut(s) 330, 331, 434, 620
BseGI GGATG 4 cut(s) 199, 546, 554, 780
BseLI CCNNNNNNNGG 1 cut(s) 597
BseMI GCAATG 2 cut(s) 24, 331
BseMII CTCAG 1 cut(s) 684
BseXI GCAGC 2 cut(s) 451, 472
BshFI GGCC 3 cut(s) 369, 524, 769
BsiHKAI GWGCWC 1 cut(s) 321
BsiHKCI CYCGRG 1 cut(s) 934
BsiSI CCGG 2 cut(s) 622, 930
BslFI GGGAC 1 cut(s) 688
BslI CCNNNNNNNGG 1 cut(s) 597
BsmAI GTCTC 2 cut(s) 169, 1007
BsmBI CGTCTC 1 cut(s) 169
BsmFI GGGAC 1 cut(s) 688
BsmI GAATGC 1 cut(s) 535
BsnI GGCC 3 cut(s) 369, 524, 769
Bso31I GGTCTC 1 cut(s) 1007
BsoBI CYCGRG 1 cut(s) 934
Bsp1286I GDGCHC 1 cut(s) 321
Bsp143I GATC 2 cut(s) 20, 761
Bsp19I CCATGG 1 cut(s) 434
BspACI CCGC 1 cut(s) 873
BspANI GGCC 3 cut(s) 369, 524, 769
BspCNI CTCAG 1 cut(s) 683
BspLI GGNNCC 1 cut(s) 835
BspMI ACCTGC 1 cut(s) 532
BspPI GGATC 1 cut(s) 15
BspQI GCTCTTC 1 cut(s) 883
BspTI CTTAAG 1 cut(s) 1027
BspTNI GGTCTC 1 cut(s) 1007
BsrDI GCAATG 2 cut(s) 24, 331
BssECI CCNNGG 4 cut(s) 330, 331, 434, 620
BssMI GATC 2 cut(s) 20, 761
BssT1I CCWWGG 1 cut(s) 434
Bst2UI CCWGG 1 cut(s) 332
Bst4CI ACNGT 2 cut(s) 158, 702
Bst6I CTCTTC 2 cut(s) 649, 883
BstAFI CTTAAG 1 cut(s) 1027
BstC8I GCNNGC 3 cut(s) 506, 639, 791
BstDEI CTNAG 2 cut(s) 567, 670
BstDSI CCRYGG 1 cut(s) 434
BstF5I GGATG 4 cut(s) 199, 546, 554, 780
BstKTI GATC 2 cut(s) 23, 764
BstMAI GTCTC 2 cut(s) 169, 1007
BstMBI GATC 2 cut(s) 20, 761
BstMWI GCNNNNNNNGC 3 cut(s) 485, 521, 530
BstNI CCWGG 1 cut(s) 332
BstNSI RCATGY 3 cut(s) 363, 404, 508
BstSCI CCNGG 2 cut(s) 330, 620
BstSFI CTRYAG 3 cut(s) 351, 480, 1021
BstV1I GCAGC 2 cut(s) 451, 472
BstV2I GAAGAC 2 cut(s) 690, 937
BstX2I RGATCY 1 cut(s) 20
BstYI RGATCY 1 cut(s) 20
Bsu36I CCTNAGG 1 cut(s) 567
BsuRI GGCC 3 cut(s) 369, 524, 769
BtgI CCRYGG 1 cut(s) 434
BtsCI GGATG 4 cut(s) 199, 546, 554, 780
BtsI GCAGTG 3 cut(s) 278, 319, 1008
BtsIMutI CAGTG 3 cut(s) 278, 319, 1008
BveI ACCTGC 1 cut(s) 532
Cac8I GCNNGC 3 cut(s) 506, 639, 791
Cfr13I GGNCC 2 cut(s) 523, 767
CseI GACGC 1 cut(s) 86
Csp6I GTAC 1 cut(s) 580
CviQI GTAC 1 cut(s) 580
DdeI CTNAG 2 cut(s) 567, 670
DpnI GATC 2 cut(s) 22, 763
DpnII GATC 2 cut(s) 20, 761
Eam1104I CTCTTC 2 cut(s) 649, 883
EarI CTCTTC 2 cut(s) 649, 883
Eco130I CCWWGG 1 cut(s) 434
Eco147I AGGCCT 1 cut(s) 369
Eco31I GGTCTC 1 cut(s) 1007
Eco57I CTGAAG 3 cut(s) 113, 141, 519
Eco81I CCTNAGG 1 cut(s) 567
Eco88I CYCGRG 1 cut(s) 934
EcoO109I RGGNCCY 1 cut(s) 523
EcoRII CCWGG 1 cut(s) 330
EcoT14I CCWWGG 1 cut(s) 434
EcoT22I ATGCAT 2 cut(s) 87, 510
ErhI CCWWGG 1 cut(s) 434
Esp3I CGTCTC 1 cut(s) 169
FaqI GGGAC 1 cut(s) 688
FauNDI CATATG 1 cut(s) 295
Fnu4HI GCNGC 4 cut(s) 5, 465, 486, 874
FokI GGATG 4 cut(s) 186, 533, 541, 767
Fsp4HI GCNGC 4 cut(s) 5, 465, 486, 874
FspBI CTAG 2 cut(s) 36, 606
GluI GCNGC 4 cut(s) 5, 465, 486, 874
HaeIII GGCC 3 cut(s) 369, 524, 769
HapII CCGG 2 cut(s) 622, 930
HgaI GACGC 1 cut(s) 86
HinfI GANTC 1 cut(s) 612
HpaII CCGG 2 cut(s) 622, 930
HphI GGTGA 4 cut(s) 180, 583, 966, 997
Hpy166II GTNNAC 1 cut(s) 611
Hpy188I TCNGA 2 cut(s) 60, 917
Hpy188III TCNNGA 3 cut(s) 140, 724, 1036
Hpy8I GTNNAC 1 cut(s) 611
HpyAV CCTTC 3 cut(s) 514, 850, 904
HpyCH4III ACNGT 2 cut(s) 158, 702
HpyCH4IV ACGT 1 cut(s) 185
HpyCH4V TGCA 8 cut(s) 85, 197, 283, 293, 324, 404, 488, 508
HpyF10VI GCNNNNNNNGC 3 cut(s) 485, 521, 530
HpyF3I CTNAG 2 cut(s) 567, 670
HpySE526I ACGT 1 cut(s) 185
Kzo9I GATC 2 cut(s) 20, 761
LguI GCTCTTC 1 cut(s) 883
LmnI GCTCC 1 cut(s) 833
Lsp1109I GCAGC 2 cut(s) 451, 472
LweI GCATC 4 cut(s) 72, 502, 577, 1041
MaeI CTAG 2 cut(s) 36, 606
MaeII ACGT 1 cut(s) 185
MaeIII GTNAC 2 cut(s) 186, 335
MalI GATC 2 cut(s) 22, 763
MboI GATC 2 cut(s) 20, 761
MfeI CAATTG 3 cut(s) 192, 254, 592
MflI RGATCY 1 cut(s) 20
MhlI GDGCHC 1 cut(s) 321
MluCI AATT 9 cut(s) 192, 254, 342, 411, 592, 628, 744, 925, 1041
MlyI GAGTC 1 cut(s) 606
MmeI TCCRAC 1 cut(s) 909
Mph1103I ATGCAT 2 cut(s) 87, 510
MroXI GAANNNNTTC 1 cut(s) 126
MseI TTAA 5 cut(s) 230, 375, 626, 867, 1028
MslI CAYNNNNRTG 3 cut(s) 44, 324, 656
MspCI CTTAAG 1 cut(s) 1027
MspI CCGG 2 cut(s) 622, 930
MspR9I CCNGG 2 cut(s) 332, 622
MunI CAATTG 3 cut(s) 192, 254, 592
Mva1269I GAATGC 1 cut(s) 535
MvaI CCWGG 1 cut(s) 332
MwoI GCNNNNNNNGC 3 cut(s) 485, 521, 530
NciI CCSGG 1 cut(s) 622
NcoI CCATGG 1 cut(s) 434
NdeI CATATG 1 cut(s) 295
NdeII GATC 2 cut(s) 20, 761
NlaIV GGNNCC 1 cut(s) 835
NmuCI GTSAC 2 cut(s) 186, 335
NsiI ATGCAT 2 cut(s) 87, 510
NspI RCATGY 3 cut(s) 363, 404, 508
PaeI GCATGC 1 cut(s) 508
PasI CCCWGGG 1 cut(s) 331
PceI AGGCCT 1 cut(s) 369
PciSI GCTCTTC 1 cut(s) 883
PctI GAATGC 1 cut(s) 535
PdmI GAANNNNTTC 1 cut(s) 126
PflMI CCANNNNNTGG 1 cut(s) 597
PkrI GCNGC 4 cut(s) 6, 466, 487, 875
PleI GAGTC 1 cut(s) 606
PpsI GAGTC 1 cut(s) 606
Psp6I CCWGG 1 cut(s) 330
PspGI CCWGG 1 cut(s) 330
PspN4I GGNNCC 1 cut(s) 835
PspPI GGNCC 2 cut(s) 523, 767
PsuI RGATCY 1 cut(s) 20
RsaI GTAC 1 cut(s) 581
RsaNI GTAC 1 cut(s) 580
RseI CAYNNNNRTG 3 cut(s) 44, 324, 656
SapI GCTCTTC 1 cut(s) 883
SaqAI TTAA 5 cut(s) 230, 375, 626, 867, 1028
SatI GCNGC 4 cut(s) 5, 465, 486, 874
Sau3AI GATC 2 cut(s) 20, 761
Sau96I GGNCC 2 cut(s) 523, 767
SchI GAGTC 1 cut(s) 606
ScrFI CCNGG 2 cut(s) 332, 622
SduI GDGCHC 1 cut(s) 321
SfaNI GCATC 4 cut(s) 72, 502, 577, 1041
SfcI CTRYAG 3 cut(s) 351, 480, 1021
SmiMI CAYNNNNRTG 3 cut(s) 44, 324, 656
SmlI CTYRAG 1 cut(s) 1027
SmoI CTYRAG 1 cut(s) 1027
SphI GCATGC 1 cut(s) 508
Sse9I AATT 9 cut(s) 192, 254, 342, 411, 592, 628, 744, 925, 1041
SseBI AGGCCT 1 cut(s) 369
SsiI CCGC 1 cut(s) 873
SspI AATATT 1 cut(s) 497
SspMI CTAG 2 cut(s) 36, 606
StuI AGGCCT 1 cut(s) 369
StyD4I CCNGG 2 cut(s) 330, 620
StyI CCWWGG 1 cut(s) 434
TaaI ACNGT 2 cut(s) 158, 702
TaiI ACGT 1 cut(s) 188
TasI AATT 9 cut(s) 192, 254, 342, 411, 592, 628, 744, 925, 1041
TauI GCSGC 1 cut(s) 876
Tru1I TTAA 5 cut(s) 230, 375, 626, 867, 1028
Tru9I TTAA 5 cut(s) 230, 375, 626, 867, 1028
TscAI CASTG 3 cut(s) 285, 326, 1015
TseFI GTSAC 2 cut(s) 186, 335
TseI GCWGC 3 cut(s) 4, 464, 485
Tsp45I GTSAC 2 cut(s) 186, 335
TspDTI ATGAA 9 cut(s) 102, 119, 137, 379, 533, 543, 636, 640, 901
TspGWI ACGGA 2 cut(s) 90, 773
TspRI CASTG 3 cut(s) 285, 326, 1015
Van91I CCANNNNNTGG 1 cut(s) 597
Vha464I CTTAAG 1 cut(s) 1027
XceI RCATGY 3 cut(s) 363, 404, 508
XmnI GAANNNNTTC 1 cut(s) 126
XspI CTAG 2 cut(s) 36, 606
Zsp2I ATGCAT 2 cut(s) 87, 510
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.